RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SGSH (Homo sapiens)

Ensembl gene IDs: ENSG00000181523

Ensembl transcript IDs: ENST00000326317.11, ENST00000570427.1, ENST00000570923.1, ENST00000571051.5, ENST00000571075.1, ENST00000571675.5, ENST00000572208.5, ENST00000572257.5, ENST00000573150.5, ENST00000574505.5, ENST00000575188.5, ENST00000575282.5, ENST00000575484.1, ENST00000576707.5, ENST00000576856.1, ENST00000576941.5

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTCCCAGGTaGGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCC +
Preference number: 1 (lower is better)
Translates to: PLGQTLVRARRRAPR*VSVGPAYCPRGTEA
Trigger: GGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 90 bp CCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACG +
Preference number: 1 (lower is better)
Translates to: PRGARPPAPAGGTGQ*GGWSSSQRWRSWGT
Trigger: CGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 90 bp GGTAAGAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTaGGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTCTCTGTG +
Preference number: 1 (lower is better)
Translates to: GKSQAPCSQVSVGGT*VLPTRHRSPCLLSV
Trigger: CACAGAGAGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 90 bp CATGCGGCCGACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGG +
Preference number: 1 (lower is better)
Translates to: HAADGGVLSGQVGSG*RGVGDEVRHQHVQW
Trigger: CCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR CCA 90 bp AGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTaGGTCTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCC +
Preference number: 1 (lower is better)
Translates to: SFSSRTPSGAHTQGS*VSHCHLASWSRSIS
Trigger: GGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR TCA 90 bp GGCGGAAGTGCCGGTGCTGCACGGAGCGCATGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: GGSAGAARSAWGRTW*PRGGSGCQRRWPRG
Trigger: CCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR TCA 90 bp AGCACCAGTCCAACTCCTTGGTCCATGCGGCCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAG +
Preference number: 1 (lower is better)
Translates to: STSPTPWSMRPTVVY*AARSARAAGVLGTK
Trigger: CTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR CCA 90 bp CGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACTTaGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCG +
Preference number: 1 (lower is better)
Translates to: RRGRTPRGRGSPTAT*PAGPEASPEAEQSA
Trigger: CGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR CCA 90 bp CAGGCCTCCTGGGATGGTCACAGCTCATTGTGGAGGGGCTGGCACTaGGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACC +
Preference number: 1 (lower is better)
Translates to: QASWDGHSSLWRGWH*GESFSSRTPSGAHT
Trigger: GGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCCCAGTGCCAGCCCCTCCACAATGAGCTGTGACCATCCCAGGAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR TCA 90 bp TCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTaGGCAAAGCGCGGGTCGGTGGCCAGGTTCTGGGTCTCGTGGGGG +
Preference number: 1 (lower is better)
Translates to: SHCHLASWSRSISRS*AKRGSVARFWVSWG
Trigger: CCCCCACGAGACCCAGAACCTGGCCACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 90 bp TCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTaGTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGG +
Preference number: 1 (lower is better)
Translates to: SKASSRPDAGKSQAP*SQVSVGGTCVLPTR
Trigger: CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp GCTGTTGCCACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTaGGATGTGTCTGGGACATGCCTGGGATGTGTGCACAGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: AVATTPQAGRPHGHV*DVSGTCLGCVHRPP
Trigger: AGGAGGCCTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTGGCAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp GGATGGGAGTGTGGACGGAAGGGCTGTTGCCACTACTCCCCAGGCTaGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCT +
Preference number: 1 (lower is better)
Translates to: GWECGRKGCCHYSPG*PATRTRVGCVWDMP
Trigger: AGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCACACTCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp TACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTaGGACATGCCTGGGATGTGTGCACAGGCCTCCTGGGATGGTCAC +
Preference number: 1 (lower is better)
Translates to: YSPGWPATRTRVGCV*DMPGMCAQASWDGH
Trigger: GTGACCATCCCAGGAGGCCTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR CCA 90 bp AGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCCCGTaGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGTGG +
Preference number: 1 (lower is better)
Translates to: SAPGSSNDGGPCTSP*ADQLWCGSGGPGRW
Trigger: CCACCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR CCA 90 bp ATGCCGCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAGCGGTGGGGGTCGTGGAAGGCGACG +
Preference number: 1 (lower is better)
Translates to: MPLSPLPNFSQKVPY*GWECPQRWGSWKAT
Trigger: CGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR TCA 90 bp CCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTCTCTGTaGAGGGTTCAGAAGTATCTGTGGCTGCCAAAGCCTGAAGAGGGC +
Preference number: 1 (lower is better)
Translates to: PAYCPRGTEAPACSL*RVQKYLWLPKPEEG
Trigger: GCCCTCTTCAGGCTTTGGCAGCCACAGATACTTCTGAACCCTTCACAGAGAGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp AAGAGTGACCCCACAGGAAGGAAGAACCCTCCTTGGATGGGAGTGTaGACGGAAGGGCTGTTGCCACTACTCCCCAGGCTGGCCGGCCAC +
Preference number: 1 (lower is better)
Translates to: KSDPTGRKNPPWMGV*TEGLLPLLPRLAGH
Trigger: GTGGCCGGCCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTTCCTGTGGGGTCACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 90 bp AGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTaGCTGCTCTCTGTGAAGGGTTCAGAAGTATCTGTGGCTGCCAAA +
Preference number: 1 (lower is better)
Translates to: SVGGTCVLPTRHRSP*LLSVKGSEVSVAAK
Trigger: TTTGGCAGCCACAGATACTTCTGAACCCTTCACAGAGAGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 90 bp GGGGGCGCTGCCCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTaGTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: GGAALSADHVCLEFP*WDMVQTQGQLCPLP
Trigger: TGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGGGCAGCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp GCAATGGCAAGAGTGACCCCACAGGAAGGAAGAACCCTCCTTGGATaGGAGTGTGGACGGAAGGGCTGTTGCCACTACTCCCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: AMARVTPQEGRTLLG*ECGRKGCCHYSPGW
Trigger: CCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTTCCTGTGGGGTCACTCTTGCCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp CCAGGCAATGGCAAGAGTGACCCCACAGGAAGGAAGAACCCTCCTTaGATGGGAGTGTGGACGGAAGGGCTGTTGCCACTACTCCCCAGG +
Preference number: 1 (lower is better)
Translates to: PGNGKSDPTGRKNPP*MGVWTEGLLPLLPR
Trigger: CCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTTCCTGTGGGGTCACTCTTGCCATTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 90 bp TGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTaGCCCCACAGGAAGGAAGAACCCTCCTTGGATGGGAGTGTGGAC +
Preference number: 1 (lower is better)
Translates to: CSGHMLWSPSRQWQE*PHRKEEPSLDGSVD
Trigger: GTCCACACTCCCATCCAAGGAGGGTTCTTCCTTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 90 bp CTGACAGGTCATGGCCCCGTCCCAGATCCACTCCCACACCTTTCCTaGCGGAGACAGACAAAGGCATACCTAGGAGGCTCACGTAGGCCT +
Preference number: 1 (lower is better)
Translates to: LTGHGPVPDPLPHLS*RRQTKAYLGGSRRP
Trigger: AGGCCTACGTGAGCCTCCTAGGTATGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGACCTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR TCA 90 bp GGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGTGGGTaGGACGTAGAAGTCCTGGTCGATGGGAAAGGGCATCTTGAAGTT +
Preference number: 1 (lower is better)
Translates to: GLTSCGAVQEVLEGG*DVEVLVDGKGHLEV
Trigger: AACTTCAAGATGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 90 bp AACCAAGCCAGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTaGCCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: NQARKQDSLVMGWGR*PVRRPRMSRIPVLG
Trigger: TCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCTGGCTTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 90 bp GCCCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTaGCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTTGACCATG +
Preference number: 1 (lower is better)
Translates to: AQKHHRFKLITQGAC*QSAETCLGNRDLTM
Trigger: CATGGTCAAGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 90 bp TCTGCCCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTaGTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTTGACC +
Preference number: 1 (lower is better)
Translates to: SAQKHHRFKLITQGA*CQSAETCLGNRDLT
Trigger: GGTCAAGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 90 bp AGAGCCACATTAGGTAATGGGTGTGGAGCAGCATCTGACAGGTCATaGCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACA +
Preference number: 1 (lower is better)
Translates to: RATLGNGCGAASDRS*PRPRSTPTPFLTET
Trigger: TGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGACCTGTCAGATGCTGCTCCACACCCATTACCTAATGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR GCA 90 bp TCCCCAGGCCCACAGTATCGGCATCACCTGGGAACTTGTCAGACATaGAAATTCTTGAGCCCGCCAAGATCTACTGAATCGGACACCCTG +
Preference number: 1 (lower is better)
Translates to: SPGPQYRHHLGTCQT*KFLSPPRSTESDTL
Trigger: CAGGGTGTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTGTGGGCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR CCA 90 bp CCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCGGCTGCCAAAGACGGTaGCCCAGAGGGGCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: PPGRRRGRTPRGRGSPTAGCQRR*PRGARP
Trigger: AGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCC...GGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGATGGGCTGGGGGCGCTaGCCTGTCCGCAGACCACGT +
Preference number: 2 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGRMGWGR*PVRRPR
Trigger: ACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCAT...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp GGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGAGGCGGAAGTGCCGGTaGTGCACGGAGCGCATGGGG +
Preference number: 2 (lower is better)
Translates to: GESFSSRTPSGAHTQGSWRRKCR*CTERMG
Trigger: CCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCT...CCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGTGCACGAGGCGGAAGTaGCGGTGCTGCACGGAGCGC +
Preference number: 2 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVCTRRK*RCCTER
Trigger: GCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCA...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGTACCAGCCCGTGGGCTaGCCAGCTGTGGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVYQPVG*PAVVRF
Trigger: GAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTA...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp GAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTACCAGCCCGTGGGCTaGCCAGCTGTGGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: ESFSSRTPSGAHTQGSWVYQPVG*PAVVRF
Trigger: GAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTA...GACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGCCAGGTGAGTGTCGGTaGGACCTGCGTACTGCCCAC +
Preference number: 2 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGRPGECR*DLRTAH
Trigger: GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGG...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp TCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACCAAAGCGCGGGTCGGTaGCCAGGTTCTGGGTCTCGT +
Preference number: 2 (lower is better)
Translates to: SRTPSGAHTQGSWVSHCHQSAGR*PGSGSR
Trigger: ACGAGACCCAGAACCTGGCCACCGACCCGCGCTTTG...GTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp CGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGG +
Preference number: 2 (lower is better)
Translates to: RWCTERPGRLGLPGCWGRVPYWG*ECPQRW
Trigger: CCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAAC...TCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR-3UTR GCA 90 bp TCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACAGTACAGGTTGGTCCTaGCGCTGGGGAAGGGGATCC +
Preference number: 2 (lower is better)
Translates to: SRTPSGAHTQGSWVSHCHSTGWS*RWGRGS
Trigger: GGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACT...GTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGTGGTGGTGGAGGGGCTaGGCACATGCTCTGGTCACA +
Preference number: 2 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGRWWWRG*AHALVT
Trigger: TGTGACCAGAGCATGTGCCCAGCCCCTCCACCACCA...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGAGTGCCCACAGCGGTaGGGGTCGTGGAAGGCGACG +
Preference number: 2 (lower is better)
Translates to: RLGLPGCWGRSKAPARPVECPQR*GSWKAT
Trigger: CGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTC...CACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR-3UTR GCA 90 bp GAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCCATGCCTGGGATGTGTaGACAGGCCTCCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: ESFSSRTPSGAHTQGSWVHAWDV*TGLLGW
Trigger: CCATCCCAGGAGGCCTGTGCACACATCCCAGGCATG...GACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTGGACGGAAGGGCTGTTaGCACTACTCCCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPAGRKGC*HYSPGW
Trigger: CCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCC...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp CTCGTGGGGGTCCCGGCTCCGGTCGTAGAGCTCCCAGCGCGCCCGGTAGTAGTACGTGGTGGCTCTGGCTaGCAAAGACGGTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LVGVPAPVVELPARPVVVRGGSG*QRRWPR
Trigger: TCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACG...TACTACTACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCGGGACCCCCACGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACAAGACTCCCTTGTCATaGGCTGGGGGCGCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHKTPLS*AGGAAL
Trigger: CAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGTGGGCTGACCAGCTGTaGTGCGGTTCAGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVWADQL*CGSGGP
Trigger: AGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCA...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp CGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGACAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAG +
Preference number: 2 (lower is better)
Translates to: RWCTERPGRLGLPGCWGRQKVPY*GWECPQ
Trigger: CTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTG...TCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR-3UTR GCA 90 bp TCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGTAAGGGTTCAGCAGTaGCCGGCCAGTACAGGTTGG +
Preference number: 2 (lower is better)
Translates to: SGCQRRWPRGARPPAPAGVRVQQ*PASTGW
Trigger: CCAACCTGTACTGGCCGGGCACTGCTGAACCCTTAC...TCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGAAGACTCCCTTGTCATaGGCTGGGGGCGCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: PQAGRPHGHVWDVSGTCLKTPLS*AGGAAL
Trigger: CAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT...CAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CTCGTGGGGGTCCCGGCTCCGGTCGTAGAGCTCCCAGCGCGCCCGGTAGTAGTATGGGCTGACCAGCTGTaGTGCGGTTCAGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LVGVPAPVVELPARPVVVWADQL*CGSGGP
Trigger: AGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCA...TACTACTACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCGGGACCCCCACGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp AAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGTATGTCTGTGTCCCCTGCCATaGCGGCAGTGCCCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: KTPLSWAGGAALSADHVCLCPLP*RQCPWW
Trigger: CCACCAGGGGCACTGCCGTCATGGCAGGGGACACAG...ACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp CTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCATTGAAGTTGAGGTTGTaGACGAGGCGGAAGTGCCGG +
Preference number: 2 (lower is better)
Translates to: LLLQDAVGGAHPGVVGLPLKLRL*TRRKCR
Trigger: CCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAA...TGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTCCACACGGACACGTGTaGGATGTGTCTGGGACATGC +
Preference number: 2 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPAPHGHV*DVSGTC
Trigger: GCATGTCCCAGACACATCCCACACGTGTCCGTGTGG...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTGGAGCACCAGTCCCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: HQCVVQDTGVTQLLEHQSPCGRR*CTERPG
Trigger: ACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGG...GGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR-3UTR TCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCCGCCGTGCTCCCAGGTaGGTGTCGGTGGGACCTGCG +
Preference number: 2 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRARRAPR*VSVGPA
Trigger: CGCAGGTCCCACCGACACTCACCTGGGAGCACGGCG...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR TCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGC +
Preference number: 2 (lower is better)
Translates to: LWSHALVPLQAMARVTPQGGTGQ*GGWSSS
Trigger: GCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCC...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR GCA 90 bp GGGGCTGGGCACATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAGAGGGGCTGGGCACATaGTCTGGTCACATGCTCTGG +
Preference number: 2 (lower is better)
Translates to: GAGHMLWSHALVPLQAMAEGLGT*SGHMLW
Trigger: CCAGAGCATGTGACCAGAGCATGTGCCCAGCCCCTC...TGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCGTGGGACCTGCGTACTaGCCACGCGGCACCGAAGCC +
Preference number: 2 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRAVGPAY*PRGTEA
Trigger: GGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCAC...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp CTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAAGGCGGAAGTGCCGGTaGTGCACGGAGCGCATGGGG +
Preference number: 2 (lower is better)
Translates to: LPLPLGQLVPKHLQKLSKRRKCR*CTERMG
Trigger: CCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCT...TTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp CTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAATCCCTTGTCATGGGCTaGGGGCGCTGCCCTGTCCGC +
Preference number: 2 (lower is better)
Translates to: LPLPLGQLVPKHLQKLSKSLVMG*GRCPVR
Trigger: GCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGA...TTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTAGCTTTTACAATAGCTaGCCTGTGGCCTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPASFYNS*PVASSS
Trigger: GCTGGAGGAGGCCACAGGCCAGCTATTGTAAAAGCT...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGGCTGCCAAAGACGGTaGCCCAGAGGGGCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: LPLPLGQLVPKHLQKLSKGCQRR*PRGARP
Trigger: AGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCC...TTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp GTCGTGGGTCTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGACCTCGTGGTGGCTCTaGCTGCCAAAGACGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VVGLPLPLGQLVPKHLQKTSWWL*LPKTVA
Trigger: GGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT...CTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp CTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGC +
Preference number: 2 (lower is better)
Translates to: LPLPLGQLVPKHLQKLSKGGTGQ*GGWSSS
Trigger: GCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCC...TTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGTGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LWSHALVPLQAMARVTPQWGRTW*PRGGSG
Trigger: GCCAGAGCCACCACGAGGTCACCATGTCCTACCCCA...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR TCA 90 bp ACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGTGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: TATWPAGPEASPEAEQSAWGRTW*PRGGSG
Trigger: GCCAGAGCCACCACGAGGTCACCATGTCCTACCCCA...CGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp CCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGCAATCAGCTGAAACCTaGCTGGGGAACAGGGACTTG +
Preference number: 2 (lower is better)
Translates to: PQAGRPHGHVWDVSGTCLQSAET*LGNRDL
Trigger: CAAGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTG...CAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp GTCGTGGGTCTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGGCTGACCAGCTGTGGTaGGGTTCAGGAGGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: VVGLPLPLGQLVPKHLQKADQLW*GSGGPG
Trigger: TCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGC...CTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAACACTACTCCCCAGGCTaGCCGGCCACACGGACACGT +
Preference number: 2 (lower is better)
Translates to: WSHALVPLQAMARVTPQEHYSPG*PATRTR
Trigger: ACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTG...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp GGGAAAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACTACTCCCCAGGCTaGCCGGCCACACGGACACGT +
Preference number: 2 (lower is better)
Translates to: GKGHLEVEVVHEAEVPVLHYSPG*PATRTR
Trigger: ACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTG...CAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR GCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAAGGACGGAAGGGCTGTTaGCACTACTCCCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: WSHALVPLQAMARVTPQEGRKGC*HYSPGW
Trigger: CCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCC...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACCGGCAGTGCCCCTGGTaGTGGAGGGGCTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDRQCPW*WRGWAH
Trigger: ATGTGCCCAGCCCCTCCACCACCAGGGGCACTGCCG...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp GGAGCCCACCTACTCAAGGAAGCGCCCTCTCCTTCGAGGGGTGTCCAGGCCGAGTCCCGTGCTGGGACATaGTTCAGACACAAGGACAAC +
Preference number: 2 (lower is better)
Translates to: GAHLLKEAPSPSRGVQAESRAGT*FRHKDN
Trigger: GTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGA...CTCGGCCTGGACACCCCTCGAAGGAGAGGGCGCTTCCTTGAGTAGGTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR TCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGTCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGT +
Preference number: 2 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKSRCRT*RSPVCR
Trigger: ACGACACACTGGTGATCTTCACGTCCGACAACGGGA...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
3UTR-3UTR GCA 90 bp TCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTCATGCCTGGGATGTGTaGACAGGCCTCCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: SLREPAANQLKPAWGTGTHAWDV*TGLLGW
Trigger: CCATCCCAGGAGGCCTGTGCACACATCCCAGGCATG...AGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp TCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTGCTGACCAGCTGTGGTaGGGTTCAGGAGGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SLREPAANQLKPAWGTGTADQLW*GSGGPG
Trigger: TCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGC...AGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGCCTTGGATGGGAGTGTaGACGGAAGGGCTGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LWSHALVPLQAMARVTPQPWMGV*TEGLLP
Trigger: TGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGG...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGTTCAGAAGTATCTGTaGCTGCCAAAGCCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: PQAGRPHGHVWDVSGTCLVQKYL*LPKPEE
Trigger: CTCTTCAGGCTTTGGCAGCCACAGATACTTCTGAAC...CAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CGTAGAGCTCCCAGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCATGGTGACCTCGTGGTaGCTCTGGCTGCCAAAGACG +
Preference number: 2 (lower is better)
Translates to: RRAPSAPGSSNDGGPCTSMVTSW*LWLPKT
Trigger: CGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCAT...GCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGCTCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp GTAGAGCTCCCAGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCCGATGTGTCTGGGACATaGCTGGGATGTGTGCACAGG +
Preference number: 2 (lower is better)
Translates to: VELPARPVVVMTEVLVPADVSGT*LGCVHR
Trigger: CCTGTGCACACATCCCAGGCATGTCCCAGACACATC...GGCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp GGAGCCCACCTACTCAAGGAAGCGCCCTCTCCTTCGAGGGGTGTCCAGGCCGAGTGTCTAGAATTCCCGTaGTGGGACATGGTTCAGACA +
Preference number: 2 (lower is better)
Translates to: GAHLLKEAPSPSRGVQAECLEFP*WDMVQT
Trigger: TGTCTGAACCATGTCCCAGCACGGGAATTCTAGACA...CTCGGCCTGGACACCCCTCGAAGGAGAGGGCGCTTCCTTGAGTAGGTGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACGGTTGGTCCTGCCGCTaGGGAAGGGGATCCCGTTGT +
Preference number: 2 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDGWSCR*GRGSRC
Trigger: ACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACC...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CCA 90 bp AAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGGACCGGCCAGTGAGGTaGATGGTCTTCGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: KGILKLRLCTRRKCRCCTDRPVR*MVFEPK
Trigger: CTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTC...CGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp AAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGGACATGGTGACCTCGTaGTGGCTCTGGCTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: KGILKLRLCTRRKCRCCTDMVTS*WLWLPK
Trigger: CTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTC...CGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp ACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGGGAGGTCCTGGAAGGTaGGTGAGACGTAGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: TATWPAGPEASPEAEQSAGGPGR*VRRRSP
Trigger: AGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC...CGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp GATCCAGGCGAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCGTGTGGAGCAGCATCTaGCAGGTCATGGCCCCGTCC +
Preference number: 2 (lower is better)
Translates to: DPGENPSLVLTSCAILSSVWSSI*QVMAPS
Trigger: GGACGGGGCCATGACCTGTCAGATGCTGCTCCACAC...GCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTCGCCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR GCA 90 bp TCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTGATGTGTCTGGGACATaGCTGGGATGTGTGCACAGG +
Preference number: 2 (lower is better)
Translates to: SLREPAANQLKPAWGTGTDVSGT*LGCVHR
Trigger: CCTGTGCACACATCCCAGGCATGTCCCAGACACATC...AGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCATGCTCTGGTCACATaGTCTGGTCCCCCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTHALVT*SGPPPG
Trigger: GCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp GGAGGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCACAAAGATGGCGTAGCTaGGGTACGGGATCGAGAACC +
Preference number: 2 (lower is better)
Translates to: GGPGRWVRRRSPGRWERAQRWRS*GTGSRT
Trigger: GGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTG...TGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp GGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCATCTGACCGGCCAGTGAGGTaGATGGTCTTCGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GPGRWVRRRSPGRWERASDRPVR*MVFEPK
Trigger: CTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTC...AGATGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGACCTCGTGGTGGCTCTaGCTGCCAAAGACGGTGGCC +
Preference number: 2 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLTSWWL*LPKTVA
Trigger: GGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR GCA 90 bp GGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCATCTGATGTGTCTGGGACATaGCTGGGATGTGTGCACAGG +
Preference number: 2 (lower is better)
Translates to: GPGRWVRRRSPGRWERASDVSGT*LGCVHR
Trigger: CCTGTGCACACATCCCAGGCATGTCCCAGACACATC...AGATGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR GCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGAAGTATCTGTGGCTaGCAAAGCCTGAAGAGGGCC +
Preference number: 2 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRARSICG*QSLKRA
Trigger: GGCCCTCTTCAGGCTTTGGCAGCCACAGATACTTCT...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCAGAACCCTCCTTGGATaGGAGTGTGGACGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PETPQVQAHHSGSLLPISRTLLG*ECGRKG
Trigger: GCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCT...GCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCCAGGCCCACAGTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGGTTGGTCCTGCCGCTaGGGAAGGGGATCCCGTTGT +
Preference number: 2 (lower is better)
Translates to: PRPTVSASPGNLSDMQILGWSCR*GRGSRC
Trigger: ACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACC...AAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTGTGGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR CCA 90 bp CGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGCCGGCCAGTACAGGTTaGTCCTGCCGCTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RMSRIPVLGHGSDTRTTVPASTG*SCRWGR
Trigger: CCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG...CACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CCA 90 bp GGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCATCTTCTTCGAGCCAAAGATaGCGTAGCTGGGGTACGGGA +
Preference number: 2 (lower is better)
Translates to: GPGRWVRRRSPGRWERASSSSQR*RSWGTG
Trigger: TCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGA...AGATGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR TCA 90 bp AGCCTCATTCTTTTCCTCTGTAGAGTGGGAGTGACAGTCCCTTCCTCACCCAGATCACGTAGGCCTCGCTaGCTTGGCCCCAGCGTTTTG +
Preference number: 2 (lower is better)
Translates to: SLILFLCRVGVTVPSSPRSRRPR*LGPSVL
Trigger: CAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGA...TCTGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGAGGAAAAGAATGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR GCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAAGAGGGGCTGGGCACATaGTCTGGTCACATGCTCTGG +
Preference number: 2 (lower is better)
Translates to: NTTGSSSSLREPAANQLKEGLGT*SGHMLW
Trigger: CCAGAGCATGTGACCAGAGCATGTGCCCAGCCCCTC...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR GCA 90 bp TCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGACAACTGTGTCCCCTaGCATGACGGCAGTGCCCCT +
Preference number: 2 (lower is better)
Translates to: SADHVCLEFPCWDMVQTQDNCVP*HDGSAP
Trigger: AGGGGCACTGCCGTCATGGCAGGGGACACAGTTGTC...TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAATCTCCCACTGCCACTTaGCCAGCTGGTCCCGAAGCA +
Preference number: 2 (lower is better)
Translates to: NTTGSSSSLREPAANQLKSPTAT*PAGPEA
Trigger: TGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGA...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR TCA 90 bp ATACGACCCATGCCGCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACAAAGGCCGGTCATCCTaGGTCTGCAGGAATTTCCGG +
Preference number: 2 (lower is better)
Translates to: IRPMPLSPLPNFSQKVPYKGRSS*VCRNFR
Trigger: CCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTT...GTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR-3UTR CCA 90 bp CGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGGCTGGGCACATGCTCTaGTCACATGCTCTGGTCCCC +
Preference number: 2 (lower is better)
Translates to: RMSRIPVLGHGSDTRTTVAGHML*SHALVP
Trigger: GGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGC...CACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACTCCCGTGCTGGGACATaGTTCAGACACAAGGACAAC +
Preference number: 2 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDSRAGT*FRHKDN
Trigger: GTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGA...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATCAAAGATGGCGTAGCTaGGGTACGGGATCGAGAACC +
Preference number: 2 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHQRWRS*GTGSRT
Trigger: GGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTG...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR TCA 90 bp GTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGCTCCCACACCTTTCCTaGCGGAGACAGACAAAGGCA +
Preference number: 2 (lower is better)
Translates to: VSASPGNLSDMQILEPAKLPHLS*RRQTKA
Trigger: TGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAG...CTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR TCA 90 bp CCCAGGCCCACAGTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTTCTGTAGAGTGGGAGTaGCAGTCCCTTCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: PRPTVSASPGNLSDMQILSVEWE*QSLPHP
Trigger: TGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGA...AAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTGTGGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR CCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAAACAGGCCTCCTGGGATaGTCACAGCTCATTGTGGAG +
Preference number: 2 (lower is better)
Translates to: NTTGSSSSLREPAANQLKTGLLG*SQLIVE
Trigger: CTCCACAATGAGCTGTGACCATCCCAGGAGGCCTGT...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR TCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTTCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGT +
Preference number: 2 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGSRCRT*RSPVCR
Trigger: ACGACACACTGGTGATCTTCACGTCCGACAACGGGA...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR GCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCAAAAAGATAAGCTTCTaGCCAGAAACACCACAGGTT +
Preference number: 2 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPKKISF*PETPQV
Trigger: AACCTGTGGTGTTTCTGGGCAGAAGCTTATCTTTTT...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CCA 90 bp GAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCTTACTTCACGCATCTGACAGGTCATaGCCCCGTCCCAGATCCACT +
Preference number: 2 (lower is better)
Translates to: ENPSLVLTSCAILSSLLHASDRS*PRPRST
Trigger: AGTGGATCTGGGACGGGGCCATGACCTGTCAGATGC...GTGAAGTAAGCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR-3UTR CCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGCTAGAATTCCCGTGCTaGGACATGGTTCAGACACAA +
Preference number: 2 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLLEFPC*DMVQTQ
Trigger: TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAG...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 72 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTaGGTACTGCCCACGCGGCACCGAAGCCCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: QAPCSQVSVGGT*VLPTRHRSPCL
Trigger: CAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 72 bp CAGACGCTGGTAAGAGCCAGGCGCCGTGCTCCCAGGTaGGTGTCGGTGGGACCTGCGTACTGCCCACGCGGC +
Preference number: 3 (lower is better)
Translates to: QTLVRARRRAPR*VSVGPAYCPRG
Trigger: GCCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTTACCAGCGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 72 bp CCAACTCCTTGGTCCATGCGGCCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTG +
Preference number: 3 (lower is better)
Translates to: PTPWSMRPTVVY*AARSARAAGVL
Trigger: CAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGAGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR CCA 72 bp GCACCAGTCCAACTCCTTGGTCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCG +
Preference number: 3 (lower is better)
Translates to: APVQLLGPCGRR*CTERPGRLGLP
Trigger: CGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR TCA 72 bp GCTCGGCCTCCAGCGCCGGCAGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGC +
Preference number: 3 (lower is better)
Translates to: ARPPAPAGGTGQ*GGWSSSQRWRS
Trigger: GCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCCTGCCGGCGCTGGAGGCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 72 bp TCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTaGCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGA +
Preference number: 3 (lower is better)
Translates to: SGAHTQGSWVSH*HLASWSRSISR
Trigger: TCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 72 bp GACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAAGTAAGGCACCAGCAC +
Preference number: 3 (lower is better)
Translates to: DGGVLSGQVGSG*RGVGDEVRHQH
Trigger: GTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR CCA 72 bp ACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: TERPGRLGLPGC*GRSKAPARPVG
Trigger: ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
3UTR-3UTR CAA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACCCTCAGGCCTCCCATTaGCAGGTCCCCAAACCAAGC +
Preference number: 3 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHPQASH*QVPKPS
Trigger: GCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGAGG...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 72 bp GCCGGTGCTGCACGGAGCGCATGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGG +
Preference number: 3 (lower is better)
Translates to: AGAARSAWGRTW*PRGGSGCQRRW
Trigger: CCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCCGTGCAGCACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CAA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGAAGGGCATCTTGAAGTaGAGGTTGTGCACGAGGCGG +
Preference number: 3 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVKGILK*RLCTRR
Trigger: CCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 72 bp TCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTaGTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTG +
Preference number: 3 (lower is better)
Translates to: SSRPDAGKSQAP*SQVSVGGTCVL
Trigger: CAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 72 bp GGTGCTCCGGGGATGACACCAGTAAGGGTTCAGCAGTaGCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: GAPGMTPVRVQQ*PASTGWSCRWG
Trigger: TCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
3UTR CCA 72 bp TGTGGACGGAAGGGCTGTTGCCACTACTCCCCAGGCTaGCCGGCCACACGGACACGTGTGGGATGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: CGRKGCCHYSPG*PATRTRVGCVW
Trigger: CCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 72 bp CCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTaGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGG +
Preference number: 3 (lower is better)
Translates to: PVRVQQCPASTG*SCRWGRGSRCR
Trigger: CCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
3UTR-3UTR CAA 90 bp TCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAATCTTGAAGTTGAGGTaGTGCACGAGGCGGAAGTGC +
Preference number: 3 (lower is better)
Translates to: SGCQRRWPRGARPPAPAGILKLR*CTRRKC
Trigger: GCACTTCCGCCTCGTGCACAACCTCAACTTCAAGAT...TCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR TCA 72 bp CACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTaGGCAAAGCGCGGGTCGGTGGCCAGGTTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: HLASWSRSISRS*AKRGSVARFWV
Trigger: GACCCAGAACCTGGCCACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 72 bp CGGCCACACGGACACGTGTGGGATGTGTCTGGGACATaGCTGGGATGTGTGCACAGGCCTCCTGGGATGGTC +
Preference number: 3 (lower is better)
Translates to: RPHGHVWDVSGT*LGCVHRPPGMV
Trigger: GACCATCCCAGGAGGCCTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR CCA 72 bp ACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTaGGATGTGTCTGGGACATGCCTGGGATGTGTGCAC +
Preference number: 3 (lower is better)
Translates to: TTPQAGRPHGHV*DVSGTCLGCVH
Trigger: GTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 72 bp AGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCTTGGTCCATGCGGCCG +
Preference number: 3 (lower is better)
Translates to: SVSFRTPASRSS*STSPTPWSMRP
Trigger: CGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR-3UTR CAA 90 bp AAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGTATGTTGGACGGAAGGGCTGTaGCCACTACTCCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: KTPLSWAGGAALSADHVCWTEGL*PLLPRL
Trigger: CAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCA...ACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CAA 90 bp GGAGCCCACCTACTCAAGGAAGCGCCCTCTCCTTCGAGGGGTGTCCAGGCCGAGGAAAACAAGACTCCCTaGTCATGGGCTGGGGGCGCT +
Preference number: 3 (lower is better)
Translates to: GAHLLKEAPSPSRGVQAEENKTP*SWAGGA
Trigger: AGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTC...CTCGGCCTGGACACCCCTCGAAGGAGAGGGCGCTTCCTTGAGTAGGTGGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CAA 90 bp TCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAATGGGAAAGGGCATCTaGAAGTTGAGGTTGTGCACG +
Preference number: 3 (lower is better)
Translates to: SGCQRRWPRGARPPAPAGMGKGI*KLRLCT
Trigger: CGTGCACAACCTCAACTTCAAGATGCCCTTTCCCAT...TCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 72 bp GGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTaGCTGCTCTCTGTGAAGGGTTCAGAAGTATCTGTG +
Preference number: 3 (lower is better)
Translates to: GTCVLPTRHRSP*LLSVKGSEVSV
Trigger: CACAGATACTTCTGAACCCTTCACAGAGAGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 72 bp TTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGGGGGTCGTGGAAGGCG +
Preference number: 3 (lower is better)
Translates to: LPNFSQKVPYWG*ECPQRWGSWKA
Trigger: CGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR CCA 72 bp TCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAGCGGTGGGGGTCGTGG +
Preference number: 3 (lower is better)
Translates to: SPLPNFSQKVPY*GWECPQRWGSW
Trigger: CCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR TCA 72 bp TGCCCACGCGGCACCGAAGCCCCTGCCTGCTCTCTGTaGAGGGTTCAGAAGTATCTGTGGCTGCCAAAGCCT +
Preference number: 3 (lower is better)
Translates to: CPRGTEAPACSL*RVQKYLWLPKP
Trigger: AGGCTTTGGCAGCCACAGATACTTCTGAACCCTTCACAGAGAGCAGGCAGGGGCTTCGGTGCCGCGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 72 bp CCCACAGGAAGGAAGAACCCTCCTTGGATGGGAGTGTaGACGGAAGGGCTGTTGCCACTACTCCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: PTGRKNPPWMGV*TEGLLPLLPRL
Trigger: CAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CAA 90 bp GGAGGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCAGGGAAGGGGATCCCGTaGTCGGACGTGAAGATCACC +
Preference number: 3 (lower is better)
Translates to: GGPGRWVRRRSPGRWERAGKGIP*SDVKIT
Trigger: GGTGATCTTCACGTCCGACAACGGGATCCCCTTCCC...TGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR CCA 72 bp GACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGTaGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: DQLWCGSGGPGR*VRRRSPGRWER
Trigger: CCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR CCA 72 bp GGTAGTAGTAATGACGGAGGTCCTTGTACCAGCCCGTaGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: GSSNDGGPCTSP*ADQLWCGSGGP
Trigger: AGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTACAAGGACCTCCGTCATTACTACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR-3UTR CAA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGAAGGAAGAACCCTCCTaGGATGGGAGTGTGGACGGA +
Preference number: 3 (lower is better)
Translates to: LWSHALVPLQAMARVTPQKEEPS*DGSVDG
Trigger: TCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTT...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CAA 90 bp GGGGCTGGGCACATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAATGGGAAAGGGCATCTaGAAGTTGAGGTTGTGCACG +
Preference number: 3 (lower is better)
Translates to: GAGHMLWSHALVPLQAMAMGKGI*KLRLCT
Trigger: CGTGCACAACCTCAACTTCAAGATGCCCTTTCCCAT...TGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
3UTR-3UTR CAA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGTGGACGGAAGGGCTGTaGCCACTACTCCCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLWTEGL*PLLPRL
Trigger: CAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCA...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR TCA 72 bp AGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGTGGGTaGGACGTAGAAGTCCTGGTCGATGGGAAAGGGCAT +
Preference number: 3 (lower is better)
Translates to: SCGAVQEVLEGG*DVEVLVDGKGH
Trigger: ATGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCCTGAACCGCACCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
3UTR GCA 72 bp CACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTaGCAATCAGCTGAAACCTGCCTGGGGAACAGGGAC +
Preference number: 3 (lower is better)
Translates to: HHRFKLITQGAC*QSAETCLGNRD
Trigger: GTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 72 bp AGAGTGACCCCACAGGAAGGAAGAACCCTCCTTGGATaGGAGTGTGGACGGAAGGGCTGTTGCCACTACTCC +
Preference number: 3 (lower is better)
Translates to: RVTPQEGRTLLG*ECGRKGCCHYS
Trigger: GGAGTAGTGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTTCCTGTGGGGTCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CAA 90 bp GAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCTTACTTCACCCCGGCCAGTACAGGTaGGTCCTGCCGCTGGGGAAG +
Preference number: 3 (lower is better)
Translates to: ENPSLVLTSCAILSSLLHPGQYR*VLPLGK
Trigger: CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGG...GTGAAGTAAGCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR GCA 72 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTaGCCTGTCCGCAGACCACGTATGTCTAGAATTCCC +
Preference number: 3 (lower is better)
Translates to: RKQDSLVMGWGR*PVRRPRMSRIP
Trigger: GGGAATTCTAGACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR GCA 72 bp TCCAGTCTGGGATACGACCCATGCCGCTCTCTCCGTTaGCAAACTTCTCACAGAAGGTTCCGTACTGGGGCT +
Preference number: 3 (lower is better)
Translates to: SSLGYDPCRSLR*QTSHRRFRTGA
Trigger: AGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
3UTR GCA 72 bp AAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTaGTGCCAATCAGCTGAAACCTGCCTGGGGAACAGG +
Preference number: 3 (lower is better)
Translates to: KHHRFKLITQGA*CQSAETCLGNR
Trigger: CCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CCA 72 bp CTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTaGGACATGGTTCAGACACAAGGACAACTGTGTCCC +
Preference number: 3 (lower is better)
Translates to: LSADHVCLEFPC*DMVQTQGQLCP
Trigger: GGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR-3UTR CAA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGGAAAAGGCAATGGTTTaGAAAGCAGCAGGATCCAGG +
Preference number: 3 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWEKAMV*KAAGSR
Trigger: CCTGGATCCTGCTGCTTTCAAAACCATTGCCTTTTC...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR TCA 72 bp GGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTaGGCCCGCCAAGATCTACTGAATCGGACACCCTGG +
Preference number: 3 (lower is better)
Translates to: GITWELVRHANS*ARQDLLNRTPW
Trigger: CCAGGGTGTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
3UTR GCA 72 bp CCACAGTATCGGCATCACCTGGGAACTTGTCAGACATaGAAATTCTTGAGCCCGCCAAGATCTACTGAATCG +
Preference number: 3 (lower is better)
Translates to: PQYRHHLGTCQT*KFLSPPRSTES
Trigger: CGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp CCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCCGCCGTGCTCCCAGGTaGGTGTCGGTGGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: PPGRRRGRTPRGRGSPTARRAPR*VSVGPA
Trigger: CGCAGGTCCCACCGACACTCACCTGGGAGCACGGCG...GGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp GCCGACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGCACGGGGCAGCTCATaGCGGCGGCGGCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: ADGGVLSGQVGSGCRGVGARGSS*RRRLGL
Trigger: GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGC...CCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR TCA 90 bp CTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLLQDAVGGAHPGVVGLPPTVVY*AARSAR
Trigger: CCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGG...TGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGGCCAAGGCGTCCAGGTaGGGGGTGGCGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRAKASR*GVAMAL
Trigger: CAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGC...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGGTGGGACCTGCGTACTaGCCACGCGGCACCGAAGCC +
Preference number: 4 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGRVGPAY*PRGTEA
Trigger: GGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCAC...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTGCACGGGGCAGCTCATaGCGGCGGCGGCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPAARGSS*RRRLGL
Trigger: GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGC...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGRGGTGQ*GGWSSS
Trigger: GCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCC...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGGGACGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: LPKTVAQRGSASSAGRRDGGTGQ*GGWSSS
Trigger: GCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCC...GTCCCTCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR TCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTCGCCGTGCTCCCAGGTaGGTGTCGGTGGGACCTGCG +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPARRAPR*VSVGPA
Trigger: CGCAGGTCCCACCGACACTCACCTGGGAGCACGGCG...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGGGACTGCGAAAGAGGAGGCTaGGGCGGGCCAAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPKTVAQRGSASSAGRRDCERGG*GGPRRP
Trigger: TGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCA...GTCCCTCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCAAGGCGGAAGTGCCGGTaGTGCACGGAGCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: LLLQDAVGGAHPGVVGLPRRKCR*CTERMG
Trigger: CCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCT...TGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GCCGACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ADGGVLSGQVGSGCRGVGVPYWG*ECPQRW
Trigger: CCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAAC...CCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CCA 90 bp CCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACCTCGTGGTGGCTCTaGCTGCCAAAGACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPGRRRGRTPRGRGSPTATSWWL*LPKTVA
Trigger: GGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT...GGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR TCA 90 bp ACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TERPGRLGLPGCWGRSKAPTVVY*AARSAR
Trigger: CCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGG...TGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR GCA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGGCCAAGGCGTCCAGGTaGGGGGTGGCGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTAKASR*GVAMAL
Trigger: CAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGC...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR GCA 90 bp GTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGGCCAAGGCGTCCAGGTaGGGGGTGGCGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VGSGCRGVGDEVRHQHVQAKASR*GVAMAL
Trigger: CAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGC...CTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR GCA 90 bp CCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACTTCGTGGGTCTCCCACTaGCACTTGGCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PGRRRGRTPRGRGSPTATSWVSH*HLASWS
Trigger: GGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGA...AGTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTATGGGCTGGGGGCGCTaGCCTGTCCGCAGACCACGT +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPAMGWGR*PVRRPR
Trigger: ACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCAT...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACAAGAGCCAGGCGCCGTaGTCCCAGGTGAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SRTPSGAHTQGSWVSHCHKSQAP*SQVSVG
Trigger: ACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTT...GTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp CGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCAGAGTGCCCACAGCGGTaGGGGTCGTGGAAGGCGACG +
Preference number: 4 (lower is better)
Translates to: RPGRLGLPGCWGRSKAPAECPQR*GSWKAT
Trigger: CGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTC...TGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTTCGGTGGCCAGGTTCTaGGTCTCGTGGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPASVARF*VSWGSR
Trigger: CCGGGACCCCCACGAGACCCAGAACCTGGCCACCGA...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp ACCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCCGGCAGTGCCCCTGGTaGTGGAGGGGCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: TSWWLWLPKTVAQRGSASRQCPW*WRGWAH
Trigger: ATGTGCCCAGCCCCTCCACCACCAGGGGCACTGCCG...GGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp TCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACCTTCTGCTCCCGAGGTaGGTGGAGGCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SRTPSGAHTQGSWVSHCHLLLPR*VEAGQE
Trigger: TTCCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAG...GTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CTCCTTGGTCCATGCGGCCGACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGTGCGAAAGAGGAGGCTaGGGCGGGCCAAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLGPCGRRWCTERPGRLGCERGG*GGPRRP
Trigger: TGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCA...CCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR GCA 90 bp TGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCCGTGGTGGCTCTGGCTaGCAAAGACGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WWLWLPKTVAQRGSASSARGGSG*QRRWPR
Trigger: TCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACG...GGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp CTGGGTCTCGTGGGGGTCCCGGCTCCGGTCGTAGAGCTCCCAGCGCGCCCGGTAGAGGGGCTGGGCACATaGTCTGGTCACATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGLVGVPAPVVELPARPVEGLGT*SGHMLW
Trigger: CCAGAGCATGTGACCAGAGCATGTGCCCAGCCCCTC...TACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCGGGACCCCCACGAGACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACAGTGTCGGTGGGACCTaGGTACTGCCCACGCGGCAC +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHSVGGT*VLPTRH
Trigger: GTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACT...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHVPYWG*ECPQRW
Trigger: CCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAAC...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACCCGGCCAGTACAGGTTaGTCCTGCCGCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHPASTG*SCRWGR
Trigger: CCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGACCTCGTGGTGGCTCTaGCTGCCAAAGACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRTSWWL*LPKTVA
Trigger: GGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACGGTCACAGCTCATTGTaGAGGGGCTGGCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: SRTPSGAHTQGSWVSHCHGHSSL*RGWHWG
Trigger: TCCCCAGTGCCAGCCCCTCCACAATGAGCTGTGACC...GTGGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCTTCTGCTCCCGAGGTaGGTGGAGGCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRLLLPR*VEAGQE
Trigger: TTCCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAG...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGCACACCAGCTTGGCTaGGCAGCAGCGGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RPVQVGPAAGEGDPVVGRAHQLG*AAAAGS
Trigger: GGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGC...ACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp TCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCTGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SWWLWLPKTVAQRGSASSWGRTW*PRGGSG
Trigger: GCCAGAGCCACCACGAGGTCACCATGTCCTACCCCA...GCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp CGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAA +
Preference number: 4 (lower is better)
Translates to: RPVQVGPAAGEGDPVVGRQVGSG*RGVGDE
Trigger: TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTG...ACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR GCA 90 bp GTGCACGAGGCGGAAGTGCCGGTGCTGCACGGAGCGCATGGGGTAGGACATGGTCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAA +
Preference number: 4 (lower is better)
Translates to: VHEAEVPVLHGAHGVGHGQVGSG*RGVGDE
Trigger: TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTG...ACCATGTCCTACCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp GTCCAACTCCTTGGTCCATGCGGCCGACGGTGGTGTACTGAGCGGCCAGGTCGGCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAA +
Preference number: 4 (lower is better)
Translates to: VQLLGPCGRRWCTERPGRQVGSG*RGVGDE
Trigger: TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTG...CCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGAGTTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR GCA 90 bp GAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCAGTACAGGTTGGTCCTaGCGCTGGGGAAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: ESFSSRTPSGAHTQGSWVSTGWS*RWGRGS
Trigger: GGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACT...GACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGCTGACCAGCTGTGGTaGGGTTCAGGAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVADQLW*GSGGPG
Trigger: TCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGC...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTTCGTGGGTCTCCCACTaGCACTTGGCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPASWVSH*HLASWS
Trigger: GGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGA...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACCGGCACCGAAGCCCCTaGCTGCTCTCTGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHRHRSP*LLSVKG
Trigger: ACCCTTCACAGAGAGCAGGCAGGGGCTTCGGTGCCG...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCACCAGTCCAACTCCTTaGTCCATGCGGCCGACGGTG +
Preference number: 4 (lower is better)
Translates to: WWLWLPKTVAQRGSASSATSPTP*SMRPTV
Trigger: CACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGT...GGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp CTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGGGACATGGTGACCTCGTGGTaGCTCTGGCTGCCAAAGACG +
Preference number: 4 (lower is better)
Translates to: LPKTVAQRGSASSAGRRDMVTSW*LWLPKT
Trigger: CGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCAT...GTCCCTCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCACAGGCCTCCTGGGATaGTCACAGCTCATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPGRRRGRTPRGRGSPTATGLLG*SQLIVE
Trigger: CTCCACAATGAGCTGTGACCATCCCAGGAGGCCTGT...GGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGGCTGGGCACATGCTCTaGTCACATGCTCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRAGHML*SHALVP
Trigger: GGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGC...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACCCAGGTGAGTGTCGGTaGGACCTGCGTACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHPGECR*DLRTAH
Trigger: GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGG...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGGGACCAGCCCACCCCAGTATaGAGTGATAGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPKTVAQRGSASSAGRRDQPTPV*SDREGR
Trigger: CCTTCCCTCCCTATCACTCCATACTGGGGTGGGCTG...GTCCCTCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR TCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACCCGTACATCCCATTCTaGTGCTGGGGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHPYIPF*CWGRPV
Trigger: CACTGGCCTGCCCCAGCATCAGAATGGGATGTACGG...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR TCA 90 bp ACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACAGCACACCAGCTTGGCTaGGCAGCAGCGGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTPQAGRPHGHVWDVSGTAHQLG*AAAAGS
Trigger: GGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGC...TGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR TCA 90 bp GGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTAGCACACCAGCTTGGCTaGGCAGCAGCGGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GCRGVGDEVRHQHVQWVVAHQLG*AAAAGS
Trigger: GGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGC...TACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR TCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTCCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAPTVVY*AARSAR
Trigger: CCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGG...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGTCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGRSRCRT*RSPVCR
Trigger: ACGACACACTGGTGATCTTCACGTCCGACAACGGGA...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGTCCTGGAAGGTGGGTaGGACGTAGAAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGCQRRWPRGARPPAPAGVLEGG*DVEVLV
Trigger: GACCAGGACTTCTACGTCTCACCCACCTTCCAGGAC...TCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp GGAGCGCATGGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGCCAAGGCGTCCAGGTaGGGGGTGGCGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GAHGVGHGDLVVALAAKDAKASR*GVAMAL
Trigger: CAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGC...GTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGATGGTGCACGTCCTGGTaGAGCCCGTACATCCCATTC +
Preference number: 4 (lower is better)
Translates to: RWCTERPGRLGLPGCWGRWCTSW*SPYIPF
Trigger: GAATGGGATGTACGGGCTGCACCAGGACGTGCACCA...TCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR GCA 90 bp CTCGTGGGGGTCCCGGCTCCGGTCGTAGAGCTCCCAGCGCGCCCGGTAGTAGTAGTCTCCGGCCCCACGTaGTTCTTCCCGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: LVGVPAPVVELPARPVVVVSGPT*FFPMMP
Trigger: AGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGAC...TACTACTACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCGGGACCCCCACGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGAGGATGTGTCTGGGACATaGCTGGGATGTGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LAAKDGGPEGLGLQRRQEDVSGT*LGCVHR
Trigger: CCTGTGCACACATCCCAGGCATGTCCCAGACACATC...CTCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGACAACTGTGTCCCCTaGCATGACGGCAGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHDNCVP*HDGSAP
Trigger: AGGGGCACTGCCGTCATGGCAGGGGACACAGTTGTC...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGACTCAGGCCTCCCATTTaGAGGTCCCCAAACCAAGCC +
Preference number: 4 (lower is better)
Translates to: SGCQRRWPRGARPPAPAGLRPPI*RSPNQA
Trigger: GGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGAG...TCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp GGGGCTGGGCACATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCATCCAGGCCGGGCTTCTaGTCCCGAGGTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGHMLWSHALVPLQAMASRPGF*SRGGWR
Trigger: CCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGA...TGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGCACGGGGCAGCTCATaGCGGCGGCGGCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: LWSHALVPLQAMARVTPQARGSS*RRRLGL
Trigger: GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGC...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp ACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TERPGRLGLPGCWGRSKARPGAG*RWRCCC
Trigger: ACAACAACAGCGCCATCGCCACCCCGCACCTGGACG...TGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CCA 90 bp CACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTGGAGCACCAGTCCGAGTGCCCACAGCGGTaGGGGTCGTGGAAGGCGACG +
Preference number: 4 (lower is better)
Translates to: HQCVVQDTGVTQLLEHQSECPQR*GSWKAT
Trigger: CGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTC...GGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CCA 90 bp GGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAACAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GGVLSGQVGSGCRGVGDEQKVPY*GWECPQ
Trigger: CTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTG...TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CCA 90 bp GGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: GGVLSGQVGSGCRGVGDEASRSS*STSPTP
Trigger: AGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGC...TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CCA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGGGTTGGTCCTGCCGCTaGGGAAGGGGATCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTGWSCR*GRGSRC
Trigger: ACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACC...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp CTCGTGGGGGTCCCGGCTCCGGTCGTAGAGCTCCCAGCGCGCCCGGTAGTAGTAGGTCACAGCTCATTGTaGAGGGGCTGGCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVGVPAPVVELPARPVVVGHSSL*RGWHWG
Trigger: TCCCCAGTGCCAGCCCCTCCACAATGAGCTGTGACC...TACTACTACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCGGGACCCCCACGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCAGAACCCTCCTTGGATaGGAGTGTGGACGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ESFSSRTPSGAHTQGSWVRTLLG*ECGRKG
Trigger: GCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCT...GACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTTGGTGGTGGAGGGGCTaGGCACATGCTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPAWWWRG*AHALVT
Trigger: TGTGACCAGAGCATGTGCCCAGCCCCTCCACCACCA...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGGGCTGGGCACATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCATCCCTTGTCATGGGCTaGGGGCGCTGCCCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: GAGHMLWSHALVPLQAMASLVMG*GRCPVR
Trigger: GCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGA...TGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GTTGCCACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGAGGGACCGGCCAGTaGGGTGGATGGTCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: VATTPQAGRPHGHVWDVSGGTGQ*GGWSSS
Trigger: GCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCC...AGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CTCGTGGGGGTCCCGGCTCCGGTCGTAGAGCTCCCAGCGCGCCCGGTAGTAGTACCAAGATGGTGGGCGTaGGGTCAGCTGTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: LVGVPAPVVELPARPVVVPRWWA*GQLCNP
Trigger: AGGATTGCACAGCTGACCTCACGCCCACCATCTTGG...TACTACTACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCGGGACCCCCACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576856.1
CDS-3UTR GCA 90 bp GCTGGGAGTGCCCACAGCGGTGGGGGTCGTGGAAGGCGACGTAGAGGAAGAAAGTGCGAAAGAGGAGGCTaGGGCGGGCCAAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AGSAHSGGGRGRRRRGRKCERGG*GGPRRP
Trigger: TGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCA...CTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR GCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTCTGGGATACGACCCATaGCGCTCTCTCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPALGYDP*RSLRCQ
Trigger: TTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAG...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGTTGAAGTTGAGGTTGTaGACGAGGCGGAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVLKLRL*TRRKCR
Trigger: CCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAA...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp TGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTATGGGCTGGGGGCGCTaGCCTGTCCGCAGACCACGT +
Preference number: 4 (lower is better)
Translates to: WPATRTRVGCVWDMPGMCMGWGR*PVRRPR
Trigger: ACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCAT...ACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSAVPGQYRLVLPLGKGIRPGAG*RWRCCC
Trigger: ACAACAACAGCGCCATCGCCACCCCGCACCTGGACG...GATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGATGTTCCGCCCCACCTaGAGGACGGAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTMFRPT*RTEPFS
Trigger: GGAGAATGGCTCCGTCCTCCAGGTGGGGCGGAACAT...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp CTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGHTDTCGMCLGHAWDVPCGRR*CTERPG
Trigger: ACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGG...CACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAACCAGTCCAACTCCTTaGTCCATGCGGCCGACGGTG +
Preference number: 4 (lower is better)
Translates to: GRLGLPGCWGRSKAPARPTSPTP*SMRPTV
Trigger: CACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGT...TGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CCA 90 bp GCTCCCAGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCCCGTGGCCGGCCAGTACAGGTTaGTCCTGCCGCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: APSAPGSSNDGGPCTSPWPASTG*SCRWGR
Trigger: CCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG...CCACGGGCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp TGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGGGTCGGTGGCCGGCCAGTACAGGTTaGTCCTGCCGCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WPAGPEASPEAEQSAGRWPASTG*SCRWGR
Trigger: CCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG...CCACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCAAAGATGGCGTAGCTaGGGTACGGGATCGAGAACC +
Preference number: 4 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRQRWRS*GTGSRT
Trigger: GGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTG...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCCAAAGATGGCGTAGCTaGGGTACGGGATCGAGAACC +
Preference number: 4 (lower is better)
Translates to: ESFSSRTPSGAHTQGSWVQRWRS*GTGSRT
Trigger: GGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTG...GACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGTCTTCGAGCCAAAGATaGCGTAGCTGGGGTACGGGA +
Preference number: 4 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRSSSQR*RSWGTG
Trigger: TCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGA...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGACCGGCCAGTGAGGTaGATGGTCTTCGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHDRPVR*MVFEPK
Trigger: CTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTC...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGGCTGCCAAAGACGGTaGCCCAGAGGGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: WPATRTRVGCVWDMPGMCGCQRR*PRGARP
Trigger: AGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCC...ACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGAGCGCATGGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGGCTGCCAAAGACGGTaGCCCAGAGGGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GAHGVGHGDLVVALAAKDGCQRR*PRGARP
Trigger: AGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCC...GTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GGGAGAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGAGGTCCTGGAAGGTaGGTGAGACGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GRELLLQDAVGGAHPGVVGGPGR*VRRRSP
Trigger: AGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC...CACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACTGCCACTTGGCCAGCTaGTCCCGAAGCATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHCHLAS*SRSISR
Trigger: TCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCA...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCAACAGGCCTCCTGGGATaGTCACAGCTCATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLQDAVGGAHPGVVGLPTGLLG*SQLIVE
Trigger: CTCCACAATGAGCTGTGACCATCCCAGGAGGCCTGT...TGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCACACTACTCCCCAGGCTaGCCGGCCACACGGACACGT +
Preference number: 4 (lower is better)
Translates to: GVGHGDLVVALAAKDGGPHYSPG*PATRTR
Trigger: ACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTG...TGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGTCCCTTGTCATGGGCTaGGGGCGCTGCCCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKSLVMG*GRCPVR
Trigger: GCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGA...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR TCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCCTGTGTCCCCTGCCATaGCGGCAGTGCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPLCPLP*RQCPWW
Trigger: CCACCAGGGGCACTGCCGTCATGGCAGGGGACACAG...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GCTCCCAGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCCCGTGGCGTGCTTCTTCCCGATaGTGCCTGGGGCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: APSAPGSSNDGGPCTSPWRASSR*CLGQAS
Trigger: ACTGGCCTGCCCCAGGCATCATCGGGAAGAAGCACG...CCACGGGCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCTGGGAGTGCCCGCCAAGGCGTCCAGGTaGGGGGTGGCGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LSVAKLLTEGSVLGLGVPAKASR*GVAMAL
Trigger: CAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGC...GGGCACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR GCA 90 bp CTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATCACCAGTGTGTCGTGCGAAAGAGGAGGCTaGGGCGGGCCAAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPLGKGIPLSDVKITSVSCERGG*GGPRRP
Trigger: TGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCA...CGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR GCA 90 bp GGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAAAGGAGTTGAAGTGGTaGACGTCCTGGTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRLGLPGCWGRSKAPARPKELKW*TSWCSP
Trigger: CGGGCTGCACCAGGACGTGCACCACTTCAACTCCTT...TGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR GCA 90 bp CGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGATGCCGCTCTCTCCGTTaGCAAACTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RWCTERPGRLGLPGCWGRCRSLR*QTSHRR
Trigger: CCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCA...TCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR GCA 90 bp GTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATAGGCGGAAGTGCCGGTaGTGCACGGAGCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: VQVGPAAGEGDPVVGREDRRKCR*CTERMG
Trigger: CCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCT...ATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCTGCACGAGGCGGAAGTaGCGGTGCTGCACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPCTRRK*RCCTER
Trigger: GCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCA...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TGTGCACGAGGCGGAAGTGCCGGTGCTGCACGGAGCGCATGGGGTAGGACATGGGCTGACCAGCTGTGGTaGGGTTCAGGAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CARGGSAGAARSAWGRTWADQLW*GSGGPG
Trigger: TCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGC...CCATGTCCTACCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp CAGCGCCGGCAGGAGGGACCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATTCGTGGGTCTCCCACTaGCACTTGGCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QRRQEGPASEVDGLRAKDSWVSH*HLASWS
Trigger: GGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGA...ATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCCTGCCGGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp GCTCCCAGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCCCGTGGGGACGGAAGGGCTGTTaGCACTACTCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: APSAPGSSNDGGPCTSPWGRKGC*HYSPGW
Trigger: CCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCC...CCACGGGCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp GGAGCCCACCTACTCAAGGAAGCGCCCTCTCCTTCGAGGGGTGTCCAGGCCGAGCATGCTCTGGTCACATaGTCTGGTCCCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAHLLKEAPSPSRGVQAEHALVT*SGPPPG
Trigger: GCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG...CTCGGCCTGGACACCCCTCGAAGGAGAGGGCGCTTCCTTGAGTAGGTGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CGAGGGGTGTCCAGGCCGGGCTTCTGCTCCCGAGGTGGGTGGAGGCAGGGCAGGGAAGAAGCAGAAACCTaGCCAAAGGTCGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGVSRPGFCSRGGWRQGREEAET*PKVAQR
Trigger: CCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC...CCTGCCCTGCCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGACACCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCATCACTCAGGGAGCCTaGTGCCAATCAGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: WWLWLPKTVAQRGSASSAITQGA*CQSAET
Trigger: GGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGAT...GGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGTATGTGGTGCGGGGTGGCGATaGCGCTGTTGTTGTACGCGC +
Preference number: 4 (lower is better)
Translates to: KTPLSWAGGAALSADHVCGAGWR*RCCCTR
Trigger: GCGCGTACAACAACAGCGCCATCGCCACCCCGCACC...ACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGTGCGCACACCAGCTTaGCTGAGCAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKVRTPA*LSSSGR
Trigger: CCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCAC...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp GGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTCAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GLPGCWGRSKAPARPVGRQKVPY*GWECPQ
Trigger: CTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTG...ACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CCA 90 bp TGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGGGTCGGTGGGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: WPAGPEASPEAEQSAGRWGLPGC*GRSKAP
Trigger: TGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC...CCACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp GGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTAGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GCRGVGDEVRHQHVQWVVGLPGC*GRSKAP
Trigger: TGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC...TACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CCA 90 bp CTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATCACCAGTGTGTCGCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPLGKGIPLSDVKITSVSPCGRR*CTERPG
Trigger: ACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGG...CGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp TGTACCAGCCCGTGGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGGGTTGGTCCTGCCGCTaGGGAAGGGGATCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: CTSPWADQLWCGSGGPGRGWSCR*GRGSRC
Trigger: ACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACC...CCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGATGGTGACCTCGTGGTaGCTCTGGCTGCCAAAGACG +
Preference number: 4 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTMVTSW*LWLPKT
Trigger: CGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCAT...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGGAGCGCATGGGGTAGGATCTCCCACTGCCACTTaGCCAGCTGGTCCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: EVVHEAEVPVLHGAHGVGSPTAT*PAGPEA
Trigger: TGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGA...TCCTACCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCACACACCCAGGGGTCGTaGGTCTCCCACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: GVGHGDLVVALAAKDGGPHTQGS*VSHCHL
Trigger: CAAGTGGCAGTGGGAGACCCACGACCCCTGGGTGTG...TGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTACAGGCCTCCTGGGATaGTCACAGCTCATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPATGLLG*SQLIVE
Trigger: CTCCACAATGAGCTGTGACCATCCCAGGAGGCCTGT...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTCTGGTCACATGCTCTaGTCCCCCTCCAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTSGHML*SPSRQW
Trigger: CCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGA...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGGCAGTGCCCCTGGTaGTGGAGGGGCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPRQCPW*WRGWAH
Trigger: ATGTGCCCAGCCCCTCCACCACCAGGGGCACTGCCG...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGAGCTTCTCCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCGTGCTGGGACATaGTTCAGACACAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: ESFSSRTPSGAHTQGSWVSRAGT*FRHKDN
Trigger: GTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGA...GACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGGAGAAGCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp CCTCCAGGACGCCGTCGGGGGCGCACACCCAGGGGTCGTGGGTCTCCCACTGCCGTTCAGAAGTATCTGTaGCTGCCAAAGCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PPGRRRGRTPRGRGSPTAVQKYL*LPKPEE
Trigger: CTCTTCAGGCTTTGGCAGCCACAGATACTTCTGAAC...GGCAGTGGGAGACCCACGACCCCTGGGTGTGCGCCCCCGACGGCGTCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp GTTGCCACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTCCAGGTGAGTGTCGGTaGGACCTGCGTACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VATTPQAGRPHGHVWDVSPGECR*DLRTAH
Trigger: GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGG...AGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTGGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGAGAGGAAGAAAGGCCTaGGGCAGGCCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CTERPGRLGLPGCWGRSKRGRKA*GRPVRR
Trigger: CCTCCTCACTGGCCTGCCCCAGGCCTTTCTTCCTCT...CTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576941.5
3UTR CAA 72 bp ACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTaGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCG +
Preference number: 4 (lower is better)
Translates to: TSKGSAVPGQYR*VLPLGKGIPLS
Trigger: CGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR TCA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGCCTTGTCGAAGGAGTTaGAGTGGTGCACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTPCRRS*SGARPG
Trigger: ACCAGGACGTGCACCACTTCAACTCCTTCGACAAGG...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp ACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATCACGTAGGCCTCGCTaGCTTGGCCCCAGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: TTPQAGRPHGHVWDVSGTSRRPR*LGPSVL
Trigger: CAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGA...TGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCAAGGAGTTGAAGTGGTaGACGTCCTGGTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GSAVPGQYRLVLPLGKGIKELKW*TSWCSP
Trigger: CGGGCTGCACCAGGACGTGCACCACTTCAACTCCTT...GATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp GAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGCACCGAAGCCCCTGCCTGCTTGCCGCTCTCTCCGTTaGCAAACTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ECRWDLRTAHAAPKPLPACRSLR*QTSHRR
Trigger: CCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCA...AGCAGGCAGGGGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CCCATGCCGCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAA +
Preference number: 4 (lower is better)
Translates to: PMPLSPLPNFSQKVPYWGQVGSG*RGVGDE
Trigger: TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTG...GCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR GCA 90 bp CTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGCATGCCTGGGATGTGTaGACAGGCCTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LAGHTDTCGMCLGHAWDVHAWDV*TGLLGW
Trigger: CCATCCCAGGAGGCCTGTGCACACATCCCAGGCATG...CACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTAAGAGCCAGGCGCCGTaGTCCCAGGTGAGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: WPATRTRVGCVWDMPGMCKSQAP*SQVSVG
Trigger: ACCGACACTCACCTGGGAGCACGGCGCCTGGCTCTT...ACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGTATGTCGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KTPLSWAGGAALSADHVCRPGAG*RWRCCC
Trigger: ACAACAACAGCGCCATCGCCACCCCGCACCTGGACG...ACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCCGTACTGGGGCTGGGAGTGCCCACAGCGGTGGGGGTCGTGGAAGGCGACGTATCGAAGGAGTTGAAGTaGTGCACGTCCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVLGLGVPTAVGVVEGDVSKELK*CTSWCS
Trigger: GCTGCACCAGGACGTGCACCACTTCAACTCCTTCGA...TACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAAGAGTGCCCACAGCGGTaGGGGTCGTGGAAGGCGACG +
Preference number: 4 (lower is better)
Translates to: WSHALVPLQAMARVTPQEECPQR*GSWKAT
Trigger: CGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTC...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAAGGCATGAGTGCCCACAGCGGTaGGGGTCGTGGAAGGCGACG +
Preference number: 4 (lower is better)
Translates to: APSQIHSHTFPDGDRQRHECPQR*GSWKAT
Trigger: CGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTC...ATGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp TGCTCCGGGGATGACACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CSGDDTSKGSAVPGQYRLVPYWG*ECPQRW
Trigger: CCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAAC...CAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp GGGGATGACACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GDDTSKGSAVPGQYRLVLPCGRR*CTERPG
Trigger: ACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGG...CAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp AAGATCACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTGGAGCACCCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KITSVSFRTPASRSSWSTPCGRR*CTERPG
Trigger: ACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGG...GGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTGATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CCA 90 bp TACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATCCCGGCCAGTACAGGTTaGTCCTGCCGCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: YRLVLPLGKGIPLSDVKIPASTG*SCRWGR
Trigger: CCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG...GATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGGAGCGCATGGGGTAGGATGCCACTTGGCCAGCTaGTCCCGAAGCATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EVVHEAEVPVLHGAHGVGCHLAS*SRSISR
Trigger: TCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCA...TCCTACCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGCACACCCAGGGGTCGTaGGTCTCCCACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: PASEVDGLRAKDGVAGVRHTQGS*VSHCHL
Trigger: CAAGTGGCAGTGGGAGACCCACGACCCCTGGGTGTG...CCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTTGGAGGGGCTGGCACTaGGGAGAGAGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAWRGWH*GESFSS
Trigger: GGAGGAGAAGCTCTCTCCCCAGTGCCAGCCCCTCCA...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGGGCTGGGCACATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAGGTCACAGCTCATTGTaGAGGGGCTGGCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: GAGHMLWSHALVPLQAMAGHSSL*RGWHWG
Trigger: TCCCCAGTGCCAGCCCCTCCACAATGAGCTGTGACC...TGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGCACAGCACTACTCCCCAGGCTaGCCGGCCACACGGACACGT +
Preference number: 4 (lower is better)
Translates to: ATRTRVGCVWDMPGMCAQHYSPG*PATRTR
Trigger: ACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGTG...CTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGGGTCGGTGGGCTGGGCACATGCTCTaGTCACATGCTCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: WPAGPEASPEAEQSAGRWAGHML*SHALVP
Trigger: GGGGACCAGAGCATGTGACCAGAGCATGTGCCCAGC...CCACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGTATGTAAGACTCCCTTGTCATaGGCTGGGGGCGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KTPLSWAGGAALSADHVCKTPLS*AGGAAL
Trigger: CAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT...ACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTAAAGGCCGGTCATCCTaGGTCTGCAGGAATTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLPGCWGRSKAPARPVGRKGRSS*VCRNFR
Trigger: CCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTT...ACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR TCA 90 bp GTCGTGGGTCTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGAGCATCTCCAGAAGCTaGGCAAAGCGCGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VVGLPLPLGQLVPKHLQKSISRS*AKRGSV
Trigger: CACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCT...CTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAATGCGAAAGAGGAGGCTaGGGCGGGCCAAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: WSHALVPLQAMARVTPQECERGG*GGPRRP
Trigger: TGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCA...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTGTCTCCGGCCCCACGTaGTTCTTCCCGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAVSGPT*FFPMMP
Trigger: AGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGAC...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTACTGGGATACGACCCATaGCGCTCTCTCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GCRGVGDEVRHQHVQWVVLGYDP*RSLRCQ
Trigger: TTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAG...TACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR GCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCCGTGGTGGCTCTGGCTaGCAAAGACGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPRGGSG*QRRWPR
Trigger: TCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACG...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGCATGCCTGGGATGTGTaGACAGGCCTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: PASEVDGLRAKDGVAGVRHAWDV*TGLLGW
Trigger: CCATCCCAGGAGGCCTGTGCACACATCCCAGGCATG...CCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp TGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTCATGCTCTGGTCACATaGTCTGGTCCCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WPATRTRVGCVWDMPGMCHALVT*SGPPPG
Trigger: GCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG...ACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CAGCGCCGGCAGGAGGGACCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATGGACGGGCATCGCCATaGCTTCATCTTCGGACACTC +
Preference number: 4 (lower is better)
Translates to: QRRQEGPASEVDGLRAKDGRASP*LHLRTL
Trigger: GAGTGTCCGAAGATGAAGGCATGGCGATGCCCGTCC...ATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCCTGCCGGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGATGTTCCGCCCCACCTaGAGGACGGAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKMFRPT*RTEPFS
Trigger: GGAGAATGGCTCCGTCCTCCAGGTGGGGCGGAACAT...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGCAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKQKVPY*GWECPQ
Trigger: CTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTG...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGACCAGTCCAACTCCTTaGTCCATGCGGCCGACGGTG +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKTSPTP*SMRPTV
Trigger: CACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGT...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp GTCGTGGGTCTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: VVGLPLPLGQLVPKHLQKASRSS*STSPTP
Trigger: AGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGC...CTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCAGGTTGGTCCTGCCGCTaGGGAAGGGGATCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPGWSCR*GRGSRC
Trigger: ACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACC...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TGTACCAGCCCGTGGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGGACCGGCCAGTGAGGTaGATGGTCTTCGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CTSPWADQLWCGSGGPGRDRPVR*MVFEPK
Trigger: CTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTC...CCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp ACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACAGACATGGTGACCTCGTaGTGGCTCTGGCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TTPQAGRPHGHVWDVSGTDMVTS*WLWLPK
Trigger: CTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTC...TGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGAGCGCATGGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACTGGGCTGACCAGCTGTaGTGCGGTTCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GAHGVGHGDLVVALAAKDWADQL*CGSGGP
Trigger: AGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCA...GTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACAAAGCGCGGGTCGGTaGCCAGGTTCTGGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPQSAGR*PGSGSR
Trigger: ACGAGACCCAGAACCTGGCCACCGACCCGCGCTTTG...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACACACCCAGGGGTCGTaGGTCTCCCACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPHTQGS*VSHCHL
Trigger: CAAGTGGCAGTGGGAGACCCACGACCCCTGGGTGTG...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCTGGAGGGGCTGGCACTaGGGAGAGAGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPWRGWH*GESFSS
Trigger: GGAGGAGAAGCTCTCTCCCCAGTGCCAGCCCCTCCA...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGCCCAGGAAGGCAGGATaGGGTGCACGGATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKPRKAG*GARMLR
Trigger: TCTGAGCATCCGTGCACCCCATCCTGCCTTCCTGGG...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp TACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATCCCGTACATCCCATTCTaGTGCTGGGGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YRLVLPLGKGIPLSDVKIPYIPF*CWGRPV
Trigger: CACTGGCCTGCCCCAGCATCAGAATGGGATGTACGG...GATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCCGTGCTTCTTCCCGATaGTGCCTGTGCGCACACCAG +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPRASSR*CLCAHQ
Trigger: CTGGTGTGCGCACAGGCATCATCGGGAAGAAGCACG...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR TCA 90 bp GATCCAGGCGAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCCCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: DPGENPSLVLTSCAILSSPTVVY*AARSAR
Trigger: CCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGG...GCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTCGCCTGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCTGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRAWGRTW*PRGGSG
Trigger: GCCAGAGCCACCACGAGGTCACCATGTCCTACCCCA...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GGAGGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCATGGGGTAGGACATGGTaGCCTCGTGGTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GGPGRWVRRRSPGRWERAWGRTW*PRGGSG
Trigger: GCCAGAGCCACCACGAGGTCACCATGTCCTACCCCA...TGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR TCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTGTCCTGGAAGGTGGGTaGGACGTAGAAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAVLEGG*DVEVLV
Trigger: GACCAGGACTTCTACGTCTCACCCACCTTCCAGGAC...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp TGCTCCGGGGATGACACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGAGCATCTCCAGAAGCTaGGCAAAGCGCGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: CSGDDTSKGSAVPGQYRLSISRS*AKRGSV
Trigger: CACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCT...CAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR TCA 90 bp CCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCCTGTGTCCCCTGCCATaGCGGCAGTGCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PETPQVQAHHSGSLLPISLCPLP*RQCPWW
Trigger: CCACCAGGGGCACTGCCGTCATGGCAGGGGACACAG...GCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGGGTGCACGTCTGTAGAGTGGGAGTaGCAGTCCCTTCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: EQGHEVLWVPQEGRMGCTSVEWE*QSLPHP
Trigger: TGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGA...CGTGCACCCCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTTGGTGCACGTCCTGGTaGAGCCCGTACATCCCATTC +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAWCTSW*SPYIPF
Trigger: GAATGGGATGTACGGGCTGCACCAGGACGTGCACCA...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR GCA 90 bp TGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGTGCCGCTCTCTCCGTTaGCAAACTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: CTERPGRLGLPGCWGRSKCRSLR*QTSHRR
Trigger: CCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCA...CTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR GCA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGAGGCGGAAGTGCCGGTaGTGCACGGAGCGCATGGGG +
Preference number: 4 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTRRKCR*CTERMG
Trigger: CCCCATGCGCTCCGTGCAGCACCGGCACTTCCGCCT...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATTGCACGAGGCGGAAGTaGCGGTGCTGCACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GWSSSQRWRSWGTGSRTNCTRRK*RCCTER
Trigger: GCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCA...ATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCCATGCCTGGGATGTGTaGACAGGCCTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPHAWDV*TGLLGW
Trigger: CCATCCCAGGAGGCCTGTGCACACATCCCAGGCATG...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAGGGGCTGGGCACATaGTCTGGTCACATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LWSHALVPLQAMARVTPQEGLGT*SGHMLW
Trigger: CCAGAGCATGTGACCAGAGCATGTGCCCAGCCCCTC...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp AAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGCGGCACCGAAGCCCCTaGCTGCTCTCTGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: KGILKLRLCTRRKCRCCTRHRSP*LLSVKG
Trigger: ACCCTTCACAGAGAGCAGGCAGGGGCTTCGGTGCCG...CGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATCACCAGTGTGTCGAGCAGGGTCATGAGGTaGTTTGGGTCCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLGKGIPLSDVKITSVSSRVMR*FGSPRK
Trigger: CTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCT...CGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp AGCCTCATTCTTTTCCTCTGTAGAGTGGGAGTGACAGTCCCTTCCTCACCCAGAGCACGGGGCAGCTCATaGCGGCGGCGGCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: SLILFLCRVGVTVPSSPRARGSS*RRRLGL
Trigger: GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGC...TCTGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGAGGAAAAGAATGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp GCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAAGGCATCGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: APSQIHSHTFPDGDRQRHRPGAG*RWRCCC
Trigger: ACAACAACAGCGCCATCGCCACCCCGCACCTGGACG...ATGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp CTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCTGGGAGTGCCCCGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSVAKLLTEGSVLGLGVPRPGAG*RWRCCC
Trigger: ACAACAACAGCGCCATCGCCACCCCGCACCTGGACG...GGGCACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTAAGTGGTGCACGTCCTaGTGCAGCCCGTACATCCCA +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAKWCTS*CSPYIP
Trigger: TGGGATGTACGGGCTGCACCAGGACGTGCACCACTT...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR CCA 90 bp GGCGACGTAGAGGAAGAAAGGCCGGTCATCCTGAGTCTGCAGGAATTTCCGGACGTGCGCACACCAGCTTaGCTGAGCAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDVEEERPVILSLQEFPDVRTPA*LSSSGR
Trigger: CCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCAC...GTCCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTTCTTCCTCTACGTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CCA 90 bp GCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGCACAGATGTTCCGCCCCACCTaGAGGACGGAGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: ATRTRVGCVWDMPGMCAQMFRPT*RTEPFS
Trigger: GGAGAATGGCTCCGTCCTCCAGGTGGGGCGGAACAT...CTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TTTGGGTGCTCCGGGGATGACACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACCAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: FGCSGDDTSKGSAVPGQYQKVPY*GWECPQ
Trigger: CTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTG...GTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CCA 90 bp GATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATGGTGGGCGTGAGGGTTGGTCCTGCCGCTaGGGAAGGGGATCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: DGVAGVRDREPIQDGGREGWSCR*GRGSRC
Trigger: ACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACC...CTCACGCCCACCATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGCACAGTGGGCTGACCAGCTGTaGTGCGGTTCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ATRTRVGCVWDMPGMCAQWADQL*CGSGGP
Trigger: AGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCA...CTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATTCGGTGGCCAGGTTCTaGGTCTCGTGGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GWSSSQRWRSWGTGSRTNSVARF*VSWGSR
Trigger: CCGGGACCCCCACGAGACCCAGAACCTGGCCACCGA...ATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GGAGGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCACAAAGCGCGGGTCGGTaGCCAGGTTCTGGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GGPGRWVRRRSPGRWERAQSAGR*PGSGSR
Trigger: ACGAGACCCAGAACCTGGCCACCGACCCGCGCTTTG...TGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GGAGCGCATGGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACTGCCACTTGGCCAGCTaGTCCCGAAGCATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GAHGVGHGDLVVALAAKDCHLAS*SRSISR
Trigger: TCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCA...GTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATGGTGGGCGTGAGTGGAGGGGCTGGCACTaGGGAGAGAGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DGVAGVRDREPIQDGGREWRGWH*GESFSS
Trigger: GGAGGAGAAGCTCTCTCCCCAGTGCCAGCCCCTCCA...CTCACGCCCACCATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTCCACACGGACACGTGTaGGATGTGTCTGGGACATGC +
Preference number: 4 (lower is better)
Translates to: VAQRLPLGQTLVRARRRAPHGHV*DVSGTC
Trigger: GCATGTCCCAGACACATCCCACACGTGTCCGTGTGG...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACCTAGAATTCCCGTGCTaGGACATGGTTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHLEFPC*DMVQTQ
Trigger: TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAG...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAAGACTCCCTTGTCATaGGCTGGGGGCGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRAKTPLS*AGGAAL
Trigger: CAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATGGTCATGAGGTGCTTTaGGTCCCCCAGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQVGPAAGEGDPVVGREDGHEVL*VPQEGR
Trigger: CCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACC...ATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp GTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATATCCGCTGCGTGAGGTaGGAGACAGAGAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: VQVGPAAGEGDPVVGREDIRCVR*ETESAR
Trigger: CCGTGCACTCTCTGTCTCCCACCTCACGCAGCGGAT...ATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp CTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATCACCAGTGTGTCGAAAGGCCGGTCATCCTaGGTCTGCAGGAATTTCCGG +
Preference number: 4 (lower is better)
Translates to: LPLGKGIPLSDVKITSVSKGRSS*VCRNFR
Trigger: CCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTT...CGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR TCA 90 bp GATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATGGTGGGCGTGAGTCACGTAGGCCTCGCTaGCTTGGCCCCAGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: DGVAGVRDREPIQDGGRESRRPR*LGPSVL
Trigger: CAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGA...CTCACGCCCACCATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR TCA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGTACCAGCCCGTGGGCTaGCCAGCTGTGGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTYQPVG*PAVVRF
Trigger: GAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTA...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACTACCAGCCCGTGGGCTaGCCAGCTGTGGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDYQPVG*PAVVRF
Trigger: GAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTA...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TGTACCAGCCCGTGGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGTGCCGCTCTCTCCGTTaGCAAACTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: CTSPWADQLWCGSGGPGRCRSLR*QTSHRR
Trigger: CCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCA...CCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp AAGATCACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTGGAGCACCCAACTCCTTGGTCCATaGGGCCGACGGTGGTGTACT +
Preference number: 4 (lower is better)
Translates to: KITSVSFRTPASRSSWSTQLLGP*GRRWCT
Trigger: AGTACACCACCGTCGGCCGCATGGACCAAGGAGTTG...GGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTGATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR GCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGTACAGGTTGGTCCTaGCGCTGGGGAAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRASTGWS*RWGRGS
Trigger: GGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACT...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGCACAGGTAAGGGTTCAGCAGTaGCCGGCCAGTACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ATRTRVGCVWDMPGMCAQVRVQQ*PASTGW
Trigger: CCAACCTGTACTGGCCGGGCACTGCTGAACCCTTAC...CTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp AGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGATGTGTCTGGGACATaGCTGGGATGTGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SKGSAVPGQYRLVLPLGKDVSGT*LGCVHR
Trigger: CCTGTGCACACATCCCAGGCATGTCCCAGACACATC...CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp CAGCGCCGGCAGGAGGGACCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATAGAAGTATCTGTGGCTaGCAAAGCCTGAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QRRQEGPASEVDGLRAKDRSICG*QSLKRA
Trigger: GGCCCTCTTCAGGCTTTGGCAGCCACAGATACTTCT...ATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCCTGCCGGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATTCCAGGCCGGGCTTCTaGTCCCGAGGTGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHSRPGF*SRGGWR
Trigger: CCTCCACCCACCTCGGGAGCAGAAGCCCGGCCTGGA...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDVPYWG*ECPQRW
Trigger: CCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAAC...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GAGGAAGAAAGGCCGGTCATCCTGAGTCTGCAGGAATTTCCGGACGAGCAGCTTGTTCCGTACTGGGGCTaGGAGTGCCCACAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EEERPVILSLQEFPDEQLVPYWG*ECPQRW
Trigger: CCACCGCTGTGGGCACTCCCAGCCCCAGTACGGAAC...AAGCTGCTCGTCCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTTCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CCA 90 bp TCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCTGGGAGTGCCCAGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: SPLPNFSQKVPYWGWECPGLPGC*GRSKAP
Trigger: TGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC...TGGGCACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAAACCAGTCCAACTCCTTaGTCCATGCGGCCGACGGTG +
Preference number: 4 (lower is better)
Translates to: WSHALVPLQAMARVTPQETSPTP*SMRPTV
Trigger: CACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGT...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: SLREPAANQLKPAWGTGTASRSS*STSPTP
Trigger: AGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGC...AGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp ACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGGACCGGCCAGTGAGGTaGATGGTCTTCGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TATWPAGPEASPEAEQSADRPVR*MVFEPK
Trigger: CTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTC...CGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CGTAGAGCTCCCAGCGCGCCCGGTAGTAGTAATGACGGAGGTCCTTGTACCAGCGACATGGTGACCTCGTaGTGGCTCTGGCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RRAPSAPGSSNDGGPCTSDMVTS*WLWLPK
Trigger: CTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTC...GCTGGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGCTCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAATCTCCCACTGCCACTTaGCCAGCTGGTCCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: WSHALVPLQAMARVTPQESPTAT*PAGPEA
Trigger: TGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGA...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCATCTGGTCACATGCTCTaGTCCCCCTCCAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPSGHML*SPSRQW
Trigger: CCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGA...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp CGACCCATGCCGCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGCCGTACATCCCATTCTaGTGCTGGGGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RPMPLSPLPNFSQKVPYWPYIPF*CWGRPV
Trigger: CACTGGCCTGCCCCAGCATCAGAATGGGATGTACGG...CCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR TCA 90 bp TCATGGCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAACGTGCTTCTTCCCGATaGTGCCTGTGCGCACACCAG +
Preference number: 4 (lower is better)
Translates to: SWPRPRSTPTPFLTETDKRASSR*CLCAHQ
Trigger: CTGGTGTGCGCACAGGCATCATCGGGAAGAAGCACG...TTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp ACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGTCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: TATWPAGPEASPEAEQSASRCRT*RSPVCR
Trigger: ACGACACACTGGTGATCTTCACGTCCGACAACGGGA...CGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR TCA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGTCACGTAGGCCTCGCTaGCTTGGCCCCAGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWSRRPR*LGPSVL
Trigger: CAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGA...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGGTCTCCGGCCCCACGTaGTTCTTCCCGATGATGCCT +
Preference number: 4 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWVSGPT*FFPMMP
Trigger: AGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGAC...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp AAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGGTAAGGGTTCAGCAGTaGCCGGCCAGTACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGILKLRLCTRRKCRCCTVRVQQ*PASTGW
Trigger: CCAACCTGTACTGGCCGGGCACTGCTGAACCCTTAC...CGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAATGCACGAGGCGGAAGTaGCGGTGCTGCACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: NTTGSSSSLREPAANQLKCTRRK*RCCTER
Trigger: GCGCTCCGTGCAGCACCGGCACTTCCGCCTCGTGCA...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGCAATCAGCTGAAACCTaGCTGGGGAACAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PASEVDGLRAKDGVAGVRQSAET*LGNRDL
Trigger: CAAGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTG...CCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAAGGACGGGCATCGCCATaGCTTCATCTTCGGACACTC +
Preference number: 4 (lower is better)
Translates to: WSHALVPLQAMARVTPQEGRASP*LHLRTL
Trigger: GAGTGTCCGAAGATGAAGGCATGGCGATGCCCGTCC...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATGTGCGCACACCAGCTTaGCTGAGCAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHVRTPA*LSSSGR
Trigger: CCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCAC...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR CCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCGGAGGTCCTGGAAGGTaGGTGAGACGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPGGPGR*VRRRSP
Trigger: AGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAATCGGTGGCCAGGTTCTaGGTCTCGTGGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: NTTGSSSSLREPAANQLKSVARF*VSWGSR
Trigger: CCGGGACCCCCACGAGACCCAGAACCTGGCCACCGA...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp GGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCATCTTGGTGGTGGAGGGGCTaGGCACATGCTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: GPGRWVRRRSPGRWERASWWWRG*AHALVT
Trigger: TGTGACCAGAGCATGTGCCCAGCCCCTCCACCACCA...AGATGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp TGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTTCCCGTGCTGGGACATaGTTCAGACACAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: WPATRTRVGCVWDMPGMCSRAGT*FRHKDN
Trigger: GTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGA...ACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAACCTTGTCGAAGGAGTTaGAGTGGTGCACGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: WSHALVPLQAMARVTPQEPCRRS*SGARPG
Trigger: ACCAGGACGTGCACCACTTCAACTCCTTCGACAAGG...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR TCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAAAGGCCGGTCATCCTaGGTCTGCAGGAATTTCCGG +
Preference number: 4 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRAKGRSS*VCRNFR
Trigger: CCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTT...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCTTACTTCACCTCTCTaGGCCTCATTCTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSAVPGQYRLVLPLGKGILTSPL*ASFFSS
Trigger: AGAGGAAAAGAATGAGGCTCAGAGAGGTGAAGTAAG...GATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGTGGTGCACGTCCTGGTaGAGCCCGTACATCCCATTC +
Preference number: 4 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWWCTSW*SPYIPF
Trigger: GAATGGGATGTACGGGCTGCACCAGGACGTGCACCA...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp TCATGGCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAACTGGGATACGACCCATaGCGCTCTCTCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SWPRPRSTPTPFLTETDKLGYDP*RSLRCQ
Trigger: TTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAG...TTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp ATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAA +
Preference number: 4 (lower is better)
Translates to: MSRIPVLGHGSDTRTTVSQVGSG*RGVGDE
Trigger: TTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTG...GGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAAGGCATACAACTCCTTGGTCCATaGGGCCGACGGTGGTGTACT +
Preference number: 4 (lower is better)
Translates to: PRPRSTPTPFLTETDKGIQLLGP*GRRWCT
Trigger: AGTACACCACCGTCGGCCGCATGGACCAAGGAGTTG...TATGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp GGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATAGTACAGGTTGGTCCTaGCGCTGGGGAAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: GWSSSQRWRSWGTGSRTNSTGWS*RWGRGS
Trigger: GGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACT...ATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp AAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGCACGTTGAAGTTGAGGTTGTaGACGAGGCGGAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: KGILKLRLCTRRKCRCCTLKLRL*TRRKCR
Trigger: CCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAA...CGTGCAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp ACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGTCTAGAATTCCCGTaGTGGGACATGGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: TTPQAGRPHGHVWDVSGTCLEFP*WDMVQT
Trigger: TGTCTGAACCATGTCCCAGCACGGGAATTCTAGACA...TGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp ATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCGTGGGACCTGCGTACTaGCCACGCGGCACCGAAGCC +
Preference number: 4 (lower is better)
Translates to: MSRIPVLGHGSDTRTTVSVGPAY*PRGTEA
Trigger: GGCTTCGGTGCCGCGTGGGCAGTACGCAGGTCCCAC...GGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCCAATCAGCTGAAACCTaGCTGGGGAACAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPQSAET*LGNRDL
Trigger: CAAGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTG...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCATGGCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAAAAGTGGTGCACGTCCTaGTGCAGCCCGTACATCCCA +
Preference number: 4 (lower is better)
Translates to: SWPRPRSTPTPFLTETDKKWCTS*CSPYIP
Trigger: TGGGATGTACGGGCTGCACCAGGACGTGCACCACTT...TTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp CCATGCCGCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCTAAGTGGTGCACGTCCTaGTGCAGCCCGTACATCCCA +
Preference number: 4 (lower is better)
Translates to: PCRSLRCQTSHRRFRTGAKWCTS*CSPYIP
Trigger: TGGGATGTACGGGCTGCACCAGGACGTGCACCACTT...AGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CCA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCAGAAGGTTCCGTACTaGGGCTGGGAGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTQKVPY*GWECPQ
Trigger: CTGTGGGCACTCCCAGCCCCAGTACGGAACCTTCTG...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLGLPGC*GRSKAP
Trigger: TGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAATCTTCGAGCCAAAGATaGCGTAGCTGGGGTACGGGA +
Preference number: 4 (lower is better)
Translates to: LPLPLGQLVPKHLQKLSKSSSQR*RSWGTG
Trigger: TCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGA...TTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGGGCTGCCAAAGACGGTaGCCCAGAGGGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RMSRIPVLGHGSDTRTTVGCQRR*PRGARP
Trigger: AGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCC...CACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACTGGGCTGACCAGCTGTaGTGCGGTTCAGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDWADQL*CGSGGP
Trigger: AGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCA...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGACAAAGCGCGGGTCGGTaGCCAGGTTCTGGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SSSQRWRSWGTGSRTNPRQSAGR*PGSGSR
Trigger: ACGAGACCCAGAACCTGGCCACCGACCCGCGCTTTG...TCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGAGCTTTTACAATAGCTaGCCTGTGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LWSHALVPLQAMARVTPQSFYNS*PVASSS
Trigger: GCTGGAGGAGGCCACAGGCCAGCTATTGTAAAAGCT...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CAA 72 bp GTCCAGTCTGGGATACGACCCATGCCGCTCTCTCCGTaGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: VQSGIRPMPLSP*PNFSQKVPYWG
Trigger: GCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR TCA 90 bp CTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATTCACGTAGGCCTCGCTaGCTTGGCCCCAGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: LRAKDGVAGVRDREPIQDSRRPR*LGPSVL
Trigger: CAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGA...ATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR TCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGAGCATCTCCAGAAGCTaGGCAAAGCGCGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLSISRS*AKRGSV
Trigger: CACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCT...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCACTTACTTCACCTCTCTaGGCCTCATTCTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GVGHGDLVVALAAKDGGPLTSPL*ASFFSS
Trigger: AGAGGAAAAGAATGAGGCTCAGAGAGGTGAAGTAAG...TGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576856.1
CDS-3UTR TCA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGCTCCCACACCTTTCCTaGCGGAGACAGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWLPHLS*RRQTKA
Trigger: TGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAG...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp CAGTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAGTGTGGAGCAGCATCTaGCAGGTCATGGCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QYRHHLGTCQTCKFLSPPVWSSI*QVMAPS
Trigger: GGACGGGGCCATGACCTGTCAGATGCTGCTCCACAC...TGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp CAGTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCACCGTCATCCGCTGCGTaGGGTGGGAGACAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QYRHHLGTCQTCKFLSPPPSSAA*GGRQRV
Trigger: CACTCTCTGTCTCCCACCTCACGCAGCGGATGACGG...TGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp CGTAGAGGAAGAAAGGCCGGTCATCCTGAGTCTGCAGGAATTTCCGGACGAGCACTGGGATACGACCCATaGCGCTCTCTCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RRGRKAGHPESAGISGRALGYDP*RSLRCQ
Trigger: TTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAG...TGCTCGTCCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTTCTTCCTCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR GCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACGTGGTGGCTCTGGCTaGCAAAGACGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NTTGSSSSLREPAANQLKRGGSG*QRRWPR
Trigger: TCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACG...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTAGTGTCGGTGGGACCTaGGTACTGCCCACGCGGCAC +
Preference number: 4 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGSVGGT*VLPTRH
Trigger: GTGCCGCGTGGGCAGTACGCAGGTCCCACCGACACT...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp ACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCATCACTCAGGGAGCCTaGTGCCAATCAGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: TCPKVAQRLPLGQTLVRAITQGA*CQSAET
Trigger: GGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGAT...GGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGAAAAAGATAAGCTTCTaGCCAGAAACACCACAGGTT +
Preference number: 4 (lower is better)
Translates to: PQAGRPHGHVWDVSGTCLKKISF*PETPQV
Trigger: AACCTGTGGTGTTTCTGGGCAGAAGCTTATCTTTTT...CAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCATGGCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAATCGAAGGAGTTGAAGTaGTGCACGTCCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SWPRPRSTPTPFLTETDKSKELK*CTSWCS
Trigger: GCTGCACCAGGACGTGCACCACTTCAACTCCTTCGA...TTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATTCTCCCACTGCCACTTaGCCAGCTGGTCCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHSPTAT*PAGPEA
Trigger: TGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGA...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCCCTTGGATGGGAGTGTaGACGGAAGGGCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PETPQVQAHHSGSLLPISPWMGV*TEGLLP
Trigger: TGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGG...GCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTAGCTTTTACAATAGCTaGCCTGTGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLREPAANQLKPAWGTGTSFYNS*PVASSS
Trigger: GCTGGAGGAGGCCACAGGCCAGCTATTGTAAAAGCT...AGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACTTCCCGATGATGCCTaGGGCAGGCCAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NTTGSSSSLREPAANQLKLPDDA*GRPVRR
Trigger: CCTCCTCACTGGCCTGCCCCAGGCATCATCGGGAAG...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR TCA 90 bp TCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGAGTCCTGGAAGGTGGGTaGGACGTAGAAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSSQRWRSWGTGSRTNPRVLEGG*DVEVLV
Trigger: GACCAGGACTTCTACGTCTCACCCACCTTCCAGGAC...TCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR GCA 90 bp AGCCTCATTCTTTTCCTCTGTAGAGTGGGAGTGACAGTCCCTTCCTCACCCAGAAGTACAGGTTGGTCCTaGCGCTGGGGAAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: SLILFLCRVGVTVPSSPRSTGWS*RWGRGS
Trigger: GGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACT...TCTGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGAGGAAAAGAATGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp GATCCAGGCGAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCGTAAGGGTTCAGCAGTaGCCGGCCAGTACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: DPGENPSLVLTSCAILSSVRVQQ*PASTGW
Trigger: CCAACCTGTACTGGCCGGGCACTGCTGAACCCTTAC...GCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTCGCCTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACTTGAAGTTGAGGTTGTaGACGAGGCGGAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDLKLRL*TRRKCR
Trigger: CCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAA...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTGGACGGAAGGGCTGTTaGCACTACTCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGGRKGC*HYSPGW
Trigger: CCAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCC...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGTGTCTAGAATTCCCGTaGTGGGACATGGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: LWSHALVPLQAMARVTPQCLEFP*WDMVQT
Trigger: TGTCTGAACCATGTCCCAGCACGGGAATTCTAGACA...CTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGACTCAGGGAGCCTGCTaGCAATCAGCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTTQGAC*QSAETC
Trigger: GCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGT...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp CCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCACTCAGGGAGCCTGCTaGCAATCAGCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: PETPQVQAHHSGSLLPISTQGAC*QSAETC
Trigger: GCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGT...GCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp GTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATGGAACTTGTCAGACATaGAAATTCTTGAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VQVGPAAGEGDPVVGREDGTCQT*KFLSPP
Trigger: TGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCC...ATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp CCCAGGCCCACAGTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: PRPTVSASPGNLSDMQILASRSS*STSPTP
Trigger: AGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGC...AAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTGTGGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp GGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCAAAGATGGCGTAGCTaGGGTACGGGATCGAGAACC +
Preference number: 4 (lower is better)
Translates to: GWSSSQRWRSWGTGSRTNQRWRS*GTGSRT
Trigger: GGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTG...ATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTACCTCGTGGTGGCTCTaGCTGCCAAAGACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGTSWWL*LPKTVA
Trigger: GGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATCCACACGGACACGTGTaGGATGTGTCTGGGACATGC +
Preference number: 4 (lower is better)
Translates to: LRAKDGVAGVRDREPIQDPHGHV*DVSGTC
Trigger: GCATGTCCCAGACACATCCCACACGTGTCCGTGTGG...ATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATCCTTGGATGGGAGTGTaGACGGAAGGGCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHPWMGV*TEGLLP
Trigger: TGGCAACAGCCCTTCCGTCCACACTCCCATCCAAGG...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATAGAACCCTCCTTGGATaGGAGTGTGGACGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHRTLLG*ECGRKG
Trigger: GCCCTTCCGTCCACACTCCCATCCAAGGAGGGTTCT...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACTAGAATTCCCGTGCTaGGACATGGTTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPLEFPC*DMVQTQ
Trigger: TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAG...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGCAGCCCACCCCAGTATaGAGTGATAGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLQPTPV*SDREGR
Trigger: CCTTCCCTCCCTATCACTCCATACTGGGGTGGGCTG...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAAAGGAGTTGAAGTGGTaGACGTCCTGGTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SADHVCLEFPCWDMVQTQKELKW*TSWCSP
Trigger: CGGGCTGCACCAGGACGTGCACCACTTCAACTCCTT...TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR GCA 90 bp TCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAACTGGGATACGACCCATaGCGCTCTCTCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SADHVCLEFPCWDMVQTQLGYDP*RSLRCQ
Trigger: TTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAG...TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACAACTCCTTGGTCCATaGGGCCGACGGTGGTGTACT +
Preference number: 4 (lower is better)
Translates to: NTTGSSSSLREPAANQLKQLLGP*GRRWCT
Trigger: AGTACACCACCGTCGGCCGCATGGACCAAGGAGTTG...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGTAAGGGTTCAGCAGTaGCCGGCCAGTACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SADHVCLEFPCWDMVQTQVRVQQ*PASTGW
Trigger: CCAACCTGTACTGGCCGGGCACTGCTGAACCCTTAC...TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTGCTGACCAGCTGTGGTaGGGTTCAGGAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGADQLW*GSGGPG
Trigger: TCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGC...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp ATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCGACAACTGTGTCCCCTaGCATGACGGCAGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: MSRIPVLGHGSDTRTTVSDNCVP*HDGSAP
Trigger: AGGGGCACTGCCGTCATGGCAGGGGACACAGTTGTC...GGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR GCA 90 bp TGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAGCGCGGGTCGGTGGAAAAAGATAAGCTTCTaGCCAGAAACACCACAGGTT +
Preference number: 4 (lower is better)
Translates to: WPAGPEASPEAEQSAGRWKKISF*PETPQV
Trigger: AACCTGTGGTGTTTCTGGGCAGAAGCTTATCTTTTT...CCACCGACCCGCGCTTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR GCA 90 bp GGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTACTGAATCGGACGCCTCCGTCATCCGCTaGGTGAGGTGGGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: GTCQTCKFLSPPRSTESDASVIR*VRWETE
Trigger: CTCTGTCTCCCACCTCACGCAGCGGATGACGGAGGC...GTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp GAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCTTACTTCACGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ENPSLVLTSCAILSSLLHGLPGC*GRSKAP
Trigger: TGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC...GTGAAGTAAGCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGTCTTCGAGCCAAAGATaGCGTAGCTGGGGTACGGGA +
Preference number: 4 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLSSSQR*RSWGTG
Trigger: TCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGA...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTGCATCTGACAGGTCATaGCCCCGTCCCAGATCCACT +
Preference number: 4 (lower is better)
Translates to: RHHLGTCQTCKFLSPPRSASDRS*PRPRST
Trigger: AGTGGATCTGGGACGGGGCCATGACCTGTCAGATGC...AGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp GATCCAGGCGAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCTGCCGCTCTCTCCGTTaGCAAACTTCTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: DPGENPSLVLTSCAILSSCRSLR*QTSHRR
Trigger: CCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCA...GCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTCGCCTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp ATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCTCAGGCCTCCCATTTaGAGGTCCCCAAACCAAGCC +
Preference number: 4 (lower is better)
Translates to: MSRIPVLGHGSDTRTTVSLRPPI*RSPNQA
Trigger: GGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGAG...GGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAATCGAAGGAGTTGAAGTaGTGCACGTCCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SADHVCLEFPCWDMVQTQSKELK*CTSWCS
Trigger: GCTGCACCAGGACGTGCACCACTTCAACTCCTTCGA...TTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR CCA 90 bp CGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGATGGTGACCTCGTGGTaGCTCTGGCTGCCAAAGACG +
Preference number: 4 (lower is better)
Translates to: RMSRIPVLGHGSDTRTTVMVTSW*LWLPKT
Trigger: CGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCAT...CACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTGACATGGTGACCTCGTaGTGGCTCTGGCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGDMVTS*WLWLPK
Trigger: CTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTC...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
3UTR CAA 72 bp CGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTaGAGCCCGCCAAGATCTACTGAATCGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: RHHLGTCQTCKF*SPPRSTESDTL
Trigger: CAGGGTGTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp CTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATTCAGCTGTGCAATCCTaGGCAGCTTACTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: LRAKDGVAGVRDREPIQDSAVQS*AAYFTS
Trigger: AGAGGTGAAGTAAGCTGCTCAGGATTGCACAGCTGA...ATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576856.1
CDS-3UTR TCA 90 bp CGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTCCAGCTGTGCAATCCTaGGCAGCTTACTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: RHHLGTCQTCKFLSPPRSPAVQS*AAYFTS
Trigger: AGAGGTGAAGTAAGCTGCTCAGGATTGCACAGCTGG...AGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATGAAGAAGCAGAAACCTaGCCAAAGGTCGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHEEAET*PKVAQR
Trigger: CCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp ATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCGGAGGTCCTGGAAGGTaGGTGAGACGTAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: MSRIPVLGHGSDTRTTVSGGPGR*VRRRSP
Trigger: AGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC...GGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR TCA 90 bp GGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTACTGAATCGGACAAAGGCCGGTCATCCTaGGTCTGCAGGAATTTCCGG +
Preference number: 4 (lower is better)
Translates to: GTCQTCKFLSPPRSTESDKGRSS*VCRNFR
Trigger: CCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTT...GTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR TCA 90 bp GAGAATCCTAGCTTAGTGCTTACCAGCTGTGCAATCCTGAGCAGCTTACTTCACTCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: ENPSLVLTSCAILSSLLHSRCRT*RSPVCR
Trigger: ACGACACACTGGTGATCTTCACGTCCGACAACGGGA...GTGAAGTAAGCTGCTCAGGATTGCACAGCTGGTAAGCACTAAGCTAGGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR GCA 90 bp AACAGGGACTTGACCATGGGGCAAAACAGAAGAAGCAGAAACCTGCCCAAAGGTAGAAGTATCTGTGGCTaGCAAAGCCTGAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NRDLTMGQNRRSRNLPKGRSICG*QSLKRA
Trigger: GGCCCTCTTCAGGCTTTGGCAGCCACAGATACTTCT...ACCTTTGGGCAGGTTTCTGCTTCTTCTGTTTTGCCCCATGGTCAAGTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp TCAGGCCTCCCATTTGCAGGTCCCCAAACCAAGCCAGAAAACAAGACTCCCTTGGTTCAGAAGTATCTGTaGCTGCCAAAGCCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGLPFAGPQTKPENKTPLVQKYL*LPKPEE
Trigger: CTCTTCAGGCTTTGGCAGCCACAGATACTTCTGAAC...CAAGGGAGTCTTGTTTTCTGGCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CCA 90 bp CCCAGGCCCACAGTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTCTGGGATTTGCAATTTaGATATTAACAAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PRPTVSASPGNLSDMQILLGFAI*ILTSIP
Trigger: TGGGATGCTTGTTAATATCCAAATTGCAAATCCCAG...AAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATACTGTGGGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS GCA 90 bp TGGCACCCCCTCCAGTGCCCGGTTCTGCAAGCCCACCTTGGTCCATaGGGCCGACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: WHPLQCPVLQAHLGP*GRRWCTERPGRLGL
Trigger: CAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGGCACTGGAGGGGGTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp CAGTGCCCGGTTCTGCAAGCCCACCTTGGTCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: QCPVLQAHLGPCGRR*CTERPGRLGLPGCW
Trigger: CCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGGCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 90 bp GGTTCTGCAAGCCCACCTTGGTCCATGCGGCCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAG +
Preference number: 5 (lower is better)
Translates to: GSASPPWSMRPTVVY*AARSARAAGVLGTK
Trigger: CTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCGGCAGGACTTGGCCCCAGCGTTTaGGGTGCTCCGGGGATGACA +
Preference number: 5 (lower is better)
Translates to: SGCQRRWPRGARPPAPAGLGPSV*GAPGMT
Trigger: TGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAG...TCCTGCCGGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS TCA 90 bp CACCGGCGTCACGCAGCTCCTGGAGCACCAGTCCAACTCCTGTGGTaGGGGGCCGAGAAGCAGAGCTCAGCCGCAGACACGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HRRHAAPGAPVQLLW*GAEKQSSAADTEGG
Trigger: GCCTCCCTCCGTGTCTGCGGCTGAGCTCTGCTTCTCGGCCCCTCACCACAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 90 bp GCCCCAAGAGAGATGTGGGCCGCGAGCTCGGAGGGAAAGGGAACCTaGGTTTCCTGCTGTCCCGGGCCCACCCCACCTGGAGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: APREMWAASSEGKGT*VSCCPGPTPPGGSA
Trigger: GGCAGAGCCTCCAGGTGGGGTGGGCCCGGGACAGCAGGAAACTCAGGTTCCCTTTCCCTCCGAGCTCGCGGCCCACATCTCTCTTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 90 bp CCGCAGACACGGAGGGAGGCAGCGGGTGGTGTGTGTAGACCCACCTaGTGCTGCATCCGGCCGCTGGGCTCCAGCGCTTTCCGGATTCGA +
Preference number: 5 (lower is better)
Translates to: PQTRREAAGGVCRPT*CCIRPLGSSAFRIR
Trigger: TCGAATCCGGAAAGCGCTGGAGCCCAGCGGCCGGATGCAGCAGCAGGTGGGTCTACACACACCACCCGCTGCCTCCCTCCGTGTCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp AGAGGAGGCTGCGGCGGGCCAAGGCGTCCAGGTGCGGGGTGGCGATaGCGCTGTTGTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCG +
Preference number: 5 (lower is better)
Translates to: RGGCGGPRRPGAGWR*RCCCTRHSQSLRHP
Trigger: CGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS CCA 90 bp CGCCCTGTCCTCGGCACGGGGTCCTCACCTGTGCGCACACCAGCTTaGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTCGAAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: RPVLGTGSSPVRTPA*LSSSGRLRTLSKEL
Trigger: CAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGTGAGGACCCCGTGCCGAGGACAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575188.5
CDS-3UTR CAA 90 bp GTACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGTGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: VLSGQVGSGCRGVGDEVRCAHTS*AEQQRQ
Trigger: CTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACA...CCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CAA 90 bp ACCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCCACCAGTCCAACTCCTaGGTCCATGCGGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: TSWWLWLPKTVAQRGSASHQSNS*VHAADG
Trigger: ACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTG...GGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CAA 90 bp GGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCCGGCCAGTACAGGTaGGTCCTGCCGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GSAVPGQYRLVLPLGKGIPGQYR*VLPLGK
Trigger: CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGG...GATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCACTGCTGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CAA 90 bp CGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTCCCGGCCAGTACAGGTaGGTCCTGCCGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RPVQVGPAAGEGDPVVGRPGQYR*VLPLGK
Trigger: CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGG...ACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS GCA 90 bp ACAGCAGTGCAGCCAGGGCTGGCGGGTGAGTCGGAGCCCCTAGTCTaGACTCACAGCCATAGGCTGTGCCTCCTCCTGGAGGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TAVQPGLAGESEPLV*THSHRLCLLLEVGG
Trigger: CCCTCCCACCTCCAGGAGGAGGCACAGCCTATGGCTGTGAGTGCAGACTAGGGGCTCCGACTCACCCGCCAGCCCTGGCTGCACTGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571075.1
CDS CCA 90 bp TGCGAAAGAGGAGGCTGCGGCGGGCCAAGGCGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGTACGCGCCACTCTCAAAGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: CERGGCGGPRRPGAG*RWRCCCTRHSQSLR
Trigger: ACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS GCA 90 bp ACACGGAGGGAGGCAGCGGGTGGTGTGTGTAGACCCACCTGCTGCTaGATCCGGCCGCTGGGCTCCAGCGCTTTCCGGATTCGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: TRREAAGGVCRPTCC*IRPLGSSAFRIRKH
Trigger: GTGCTTTCGAATCCGGAAAGCGCTGGAGCCCAGCGGCCGGATGCAGCAGCAGGTGGGTCTACACACACCACCCGCTGCCTCCCTCCGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 90 bp CAGACACGGAGGGAGGCAGCGGGTGGTGTGTGTAGACCCACCTGCTaGTGCATCCGGCCGCTGGGCTCCAGCGCTTTCCGGATTCGAAAG +
Preference number: 5 (lower is better)
Translates to: QTRREAAGGVCRPTC*CIRPLGSSAFRIRK
Trigger: CTTTCGAATCCGGAAAGCGCTGGAGCCCAGCGGCCGGATGCAGCAGCAGGTGGGTCTACACACACCACCCGCTGCCTCCCTCCGTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp TCCGTACTGGGGCTGGGAGTGCCCACAGCGGTGGGGGTCGTGGAAGGCGACGTAACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SVLGLGVPTAVGVVEGDVTEVKA*RKRRLR
Trigger: CCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGT...TACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CAA 90 bp GGAGCCCACCTACTCAAGGAAGCGCCCTCTCCTTCGAGGGGTGTCCAGGCCGAGCACCAGTCCAACTCCTaGGTCCATGCGGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: GAHLLKEAPSPSRGVQAEHQSNS*VHAADG
Trigger: ACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTG...CTCGGCCTGGACACCCCTCGAAGGAGAGGGCGCTTCCTTGAGTAGGTGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp CAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACGCGGAAGGAAGAACCCTCCTaGGATGGGAGTGTGGACGGA +
Preference number: 5 (lower is better)
Translates to: QAPCSQVSVGGTCVLPTRKEEPS*DGSVDG
Trigger: TCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTT...CCGCGTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS TCA 90 bp AGTCAAACGGGTACACGGTCTCCGGCCCCACGTGCTTCTTCCCGATaGTGCCTGGGCGGGAAGAGAGGCCTGTGCGCACACCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SQTGTRSPAPRASSR*CLGGKRGLCAHQLG
Trigger: GCCAAGCTGGTGTGCGCACAGGCCTCTCTTCCCGCCCAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS GCA 90 bp GGCGCTGTTGTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCTaGGTGAGGTGGGAGACAGAGAGTGCACGGTCGGCGAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAVVVRATLKASVIR*VRWETESARSARSS
Trigger: GCTGCTCCTCGCCGACCGTGCACTCTCTGTCTCCCACCTCACGCAGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS CCA 90 bp CAGCCCCTGTGGTGGGTGTGGCCACAGTGCTCCTGGCTCATCATTTaGGGCCAGAGAGAGATGTGGGCCCCAAGAGAGATGTGGGCCGCG +
Preference number: 5 (lower is better)
Translates to: QPLWWVWPQCSWLII*GQREMWAPREMWAA
Trigger: CGCGGCCCACATCTCTCTTGGGGCCCACATCTCTCTCTGGCCCCAAATGATGAGCCAGGAGCACTGTGGCCACACCCACCACAGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp CAGCACACAGGAGCTGCCCTCGGAAGGGCCGAACCTACGCCACTCTaGGCGGCTCCCTTCTCCAATCCAATCAGCAGCGGGAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: QHTGAALGRAEPTPL*AAPFSNPISSGRCL
Trigger: AAGGCACCTCCCGCTGCTGATTGGATTGGAGAAGGGAGCCGCCCAGAGTGGCGTAGGTTCGGCCCTTCCGAGGGCAGCTCCTGTGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp ACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCAGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TERPGRLGLPGCWGRSKAAMALL*YAPLSK
Trigger: CTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGC...TGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CAA 90 bp CCAGGTCGGCTCGGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PGRLGLPGCWGRSKAPARAMALL*YAPLSK
Trigger: CTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGC...ACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CAA 90 bp GGGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GLPGCWGRSKAPARPVGRTEVKA*RKRRLR
Trigger: CCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGT...ACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CAA 90 bp GTCGCTCAAAGGCTTCCTCTAGGCCAGACGCTGGTAAGAGCCAGGCGCCGTGCTTGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: VAQRLPLGQTLVRARRRACAHTS*AEQQRQ
Trigger: CTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACA...AGCACGGCGCCTGGCTCTTACCAGCGTCTGGCCTAGAGGAAGCCTTTGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR CAA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACCCGGCCAGTACAGGTaGGTCCTGCCGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPPGQYR*VLPLGK
Trigger: CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGG...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp ACTACTCCCCAGGCTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACAGTAGGCCTCGCTGACTaGGCCCCAGCGTTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TTPQAGRPHGHVWDVSGTVGLAD*APAFWV
Trigger: CACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTAC...TGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAGCCTGGGGAGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp CCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGGAAAACAAGACTCCCTaGTCATGGGCTGGGGGCGCT +
Preference number: 5 (lower is better)
Translates to: PASTGWSCRWGRGSRCRTENKTP*SWAGGA
Trigger: AGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTC...CGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS GCA 90 bp CCACTCTGGGCGGCTCCCTTCTCCAATCCAATCAGCAGCGGGAGGTaGCTTGTCGAGCCGACACCTCTCACCGCCACGTCATCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PLWAAPFSNPISSGR*LVEPTPLTATSSLW
Trigger: CCAGAGAGATGACGTGGCGGTGAGAGGTGTCGGCTCGACAAGGCACCTCCCGCTGCTGATTGGATTGGAGAAGGGAGCCGCCCAGAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 90 bp TCCGTGTACGCAAAGTCAAACGGGTACACGGTCTCCGGCCCCACGTaGTTCTTCCCGATGATGCCTGGGCGGGAAGAGAGGCCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: SVYAKSNGYTVSGPT*FFPMMPGREERPVR
Trigger: GCGCACAGGCCTCTCTTCCCGCCCAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS CCA 90 bp GTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCTGCGTGAGGTaGGAGACAGAGAGTGCACGGTCGGCGAGGAGCAGCAGTGCGTTC +
Preference number: 5 (lower is better)
Translates to: VVRATLKASVIRCVR*ETESARSARSSSAF
Trigger: GAACGCACTGCTGCTCCTCGCCGACCGTGCACTCTCTGTCTCCCACCTCACGCAGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp TGTACCAGCCCGTGGGCTGACCAGCTGTGGTGCGGTTCAGGAGGTCCTGGAAGGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCA +
Preference number: 5 (lower is better)
Translates to: CTSPWADQLWCGSGGPGRVAMAL*LYAPLS
Trigger: TGAGAGTGGCGCGTACAACAACAGCGCCATCGCCAC...CCTTCCAGGACCTCCTGAACCGCACCACAGCTGGTCAGCCCACGGGCTGGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CAA 90 bp GGCTGCCGGGGTGTTGGGGACGAAGTAAGGCACCAGCACGTCCAGTGGGTCGTAGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCA +
Preference number: 5 (lower is better)
Translates to: GCRGVGDEVRHQHVQWVVVAMAL*LYAPLS
Trigger: TGAGAGTGGCGCGTACAACAACAGCGCCATCGCCAC...TACGACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574505.5
ENST00000576941.5
CDS-3UTR CAA 90 bp GAGCCAGGCGCCGTGCTCCCAGGTGAGTGTCGGTGGGACCTGCGTACTGCCCACATGCCGCTCTCTCCGTaGCCAAACTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: EPGAVLPGECRWDLRTAHMPLSP*PNFSQK
Trigger: CTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCAT...GTGGGCAGTACGCAGGTCCCACCGACACTCACCTGGGAGCACGGCGCCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GGAGCGCATGGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGTAGGCCTCGCTGACTaGGCCCCAGCGTTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GAHGVGHGDLVVALAAKDVGLAD*APAFWV
Trigger: CACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTAC...GTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CAA 90 bp TGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGAGGGGCTCGGCCTCCAGCGCCATGGGAAAGGGCATCTaGAAGTTGAGGTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: WWLWLPKTVAQRGSASSAMGKGI*KLRLCT
Trigger: CGTGCACAACCTCAACTTCAAGATGCCCTTTCCCAT...GGCGCTGGAGGCCGAGCCCCTCTGGGCCACCGTCTTTGGCAGCCAGAGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS TCA 90 bp ACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCT +
Preference number: 5 (lower is better)
Translates to: TGWSCRWGRGSRCRT*RSPVCRSGHRRHAA
Trigger: AGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326317.11
ENST00000570923.1
ENST00000572257.5
ENST00000573150.5
ENST00000575282.5
CDS TCA 90 bp CTGTTGTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCTGCGTaGGGTGGGAGACAGAGAGTGCACGGTCGGCGAGGAGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LLLYAPLSKPPSSAA*GGRQRVHGRRGAAV
Trigger: CACTGCTGCTCCTCGCCGACCGTGCACTCTCTGTCTCCCACCTCACGCAGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS CCA 90 bp CTCCAGCGCTTTCCGGATTCGAAAGCACCCTGTAGTTCTTCCCAATaGCCCTGGCTCTTGCCCAGCTCTTGCCCAGCTCCGCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LQRFPDSKAPCSSSQ*PWLLPSSCPAPPSS
Trigger: GGAGCTGGGCGGAGCTGGGCAAGAGCTGGGCAAGAGCCAGGGCCATTGGGAAGAACTACAGGGTGCTTTCGAATCCGGAAAGCGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp GGGGTAGGACATGGTGACCTCGTGGTGGCTCTGGCTGCCAAAGACGGTGGCCCAGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GVGHGDLVVALAAKDGGPAMALL*YAPLSK
Trigger: CTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGC...TGGGCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS-3UTR CAA 90 bp TGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGGCAGGCTCCGCACCTaGTCGAAGGAGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: WPATRTRVGCVWDMPGMCGRLRT*SKELKW
Trigger: CCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCC...ACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR CAA 90 bp GTGAAGATCACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTGGAGCCACCAGTCCAACTCCTaGGTCCATGCGGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: VKITSVSFRTPASRSSWSHQSNS*VHAADG
Trigger: ACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTG...GCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTGATCTTCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CAA 90 bp GTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTGAAGATGTAGGCCTCGCTGACTaGGCCCCAGCGTTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: VQVGPAAGEGDPVVGREDVGLAD*APAFWV
Trigger: CACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTAC...ATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CAA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCTGGACGGAAGGGCTGTaGCCACTACTCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPWTEGL*PLLPRL
Trigger: CAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCA...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GTCGTGGGTCTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCCTCAGGCCTCCCATTaGCAGGTCCCCAAACCAAGC +
Preference number: 5 (lower is better)
Translates to: VVGLPLPLGQLVPKHLQKPQASH*QVPKPS
Trigger: GCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGAGG...CTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAGACCCACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS TCA 90 bp CGTAGCTGGGGTACGGGATCGAGAACCAATCCAAGATGGTGGGCGTaGGGTCTGGAAGGGACGCGGCATCTCAGAGCAGCAGAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: RSWGTGSRTNPRWWA*GLEGTRHLRAAEPS
Trigger: TGAGGGCTCTGCTGCTCTGAGATGCCGCGTCCCTTCCAGACCTCACGCCCACCATCTTGGATTGGTTCTCGATCCCGTACCCCAGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp CCCAGGTCCTGTGACTGGAAATATCTGAAGTCTTCACGCAACCTCTaGGGCACCCGAAGGCCCCAGCCCAGGAGCAGGTCCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: PRSCDWKYLKSSRNL*GTRRPQPRSRSTSG
Trigger: CCCTGATGTGGACCTGCTCCTGGGCTGGGGCCTTCGGGTGCCCCAGAGGTTGCGTGAAGACTTCAGATATTTCCAGTCACAGGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp CGCTTTCCGGATTCGAAAGCACCCTGTAGTTCTTCCCAATGGCCCTaGCTCTTGCCCAGCTCTTGCCCAGCTCCGCCCAGCTCCCATTCC +
Preference number: 5 (lower is better)
Translates to: RFPDSKAPCSSSQWP*LLPSSCPAPPSSHS
Trigger: GGAATGGGAGCTGGGCGGAGCTGGGCAAGAGCTGGGCAAGAGCCAGGGCCATTGGGAAGAACTACAGGGTGCTTTCGAATCCGGAAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp AAGATCACCAGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCTGTGGTGAGGGGCCGAGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: KITSVSFRTPASRSS*STSPTPVVRGREAE
Trigger: CTCTGCTTCTCGGCCCCTCACCACAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACTGGTGATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp GGGGTACGGGATCGAGAACCAATCCAAGATGGTGGGCGTGAGGTCTaGAAGGGACGCGGCATCTCAGAGCAGCAGAGCCCTCAGCACACA +
Preference number: 5 (lower is better)
Translates to: GVRDREPIQDGGREV*KGRGISEQQSPQHT
Trigger: TGTGTGCTGAGGGCTCTGCTGCTCTGAGATGCCGCGTCCCTTCCAGACCTCACGCCCACCATCTTGGATTGGTTCTCGATCCCGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp TGCTCCGGGGATGACACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACAGGTTGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCA +
Preference number: 5 (lower is better)
Translates to: CSGDDTSKGSAVPGQYRLVAMAL*LYAPLS
Trigger: TGAGAGTGGCGCGTACAACAACAGCGCCATCGCCAC...CAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CAA 90 bp CATGCTCTGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HALVTCSGPPPGNGKSDPTEVKA*RKRRLR
Trigger: CCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGT...GGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCAGAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp TCATGGCCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAATGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SWPRPRSTPTPFLTETDKCAHTS*AEQQRQ
Trigger: CTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACA...TTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGGCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp GGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATCCCGGCCAGTACAGGTaGGTCCTGCCGCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GWSSSQRWRSWGTGSRTNPGQYR*VLPLGK
Trigger: CTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGG...ATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CAA 90 bp GGAGGTCCTGGAAGGTGGGTGAGACGTAGAAGTCCTGGTCGATGGGAAAGGGCACTTGGCCCCAGCGTTTaGGGTGCTCCGGGGATGACA +
Preference number: 5 (lower is better)
Translates to: GGPGRWVRRRSPGRWERALGPSV*GAPGMT
Trigger: TGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAG...TGCCCTTTCCCATCGACCAGGACTTCTACGTCTCACCCACCTTCCAGGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CAA 90 bp CCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGTGCACAGGGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PHGHVWDVSGTCLGCVHRAMALL*YAPLSK
Trigger: CTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGC...CCTGTGCACACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp TTTGGGTGCTCCGGGGATGACACCAGTAAGGGTTCAGCAGTGCCCGGCCAGTACGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: FGCSGDDTSKGSAVPGQYAMALL*YAPLSK
Trigger: CTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGC...GTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000573150.5
CDS-3UTR CAA 90 bp TCACTCAGGGAGCCTGCTGCCAATCAGCTGAAACCTGCCTGGGGAACAGGGACTACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SLREPAANQLKPAWGTGTTEVKA*RKRRLR
Trigger: CCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGT...AGTCCCTGTTCCCCAGGCAGGTTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp CTGGCCGGCCACACGGACACGTGTGGGATGTGTCTGGGACATGCCTGGGATGTGATCTTGAAGTTGAGGTaGTGCACGAGGCGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LAGHTDTCGMCLGHAWDVILKLR*CTRRKC
Trigger: GCACTTCCGCCTCGTGCACAACCTCAACTTCAAGAT...CACATCCCAGGCATGTCCCAGACACATCCCACACGTGTCCGTGTGGCCGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GAGGGACCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGAAGGGCATCTTGAAGTaGAGGTTGTGCACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: EGPASEVDGLRAKDGVAGKGILK*RLCTRR
Trigger: CCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT...CCCAGCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS CCA 90 bp AACAGCCTCACTCCGGACCACCCCGTCTCTCTACGGTTCTCTCTGTaGCCCCGAGGTTGGGAACCTGAATCCGATTTGGTCAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: NSLTPDHPVSLRFSL*PRGWEPESDLVRAS
Trigger: AGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTAGAGAGACGGGGTGGTCCGGAGTGAGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp ACCCATGCCGCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCA +
Preference number: 5 (lower is better)
Translates to: THAALSVAKLLTEGSVLGVAMAL*LYAPLS
Trigger: TGAGAGTGGCGCGTACAACAACAGCGCCATCGCCAC...CCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CAA 90 bp AGAAAACAAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCAACCTTGTCGAAGGAGTaGAAGTGGTGCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RKQDSLVMGWGRCPVRRPTLSKE*KWCTSW
Trigger: CCAGGACGTGCACCACTTCAACTCCTTCGACAAGGT...TGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326317.11
CDS-3UTR CAA 90 bp GGCGACGTAGAGGAAGAAAGGCCGGTCATCCTGAGTCTGCAGGAATTTCCGGACGGCAGGCTCCGCACCTaGTCGAAGGAGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GDVEEERPVILSLQEFPDGRLRT*SKELKW
Trigger: CCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCC...GTCCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTTCTTCCTCTACGTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CAA 90 bp AAGACTCCCTTGTCATGGGCTGGGGGCGCTGCCCTGTCCGCAGACCACGTATGTATGCCGCTCTCTCCGTaGCCAAACTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: KTPLSWAGGAALSADHVCMPLSP*PNFSQK
Trigger: CTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCAT...ACATACGTGGTCTGCGGACAGGGCAGCGCCCCCAGCCCATGACAAGGGAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTGGAGCACCAGTCCAACTCATGCCGCTCTCTCCGTaGCCAAACTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: VCRSGHRRHAAPGAPVQLMPLSP*PNFSQK
Trigger: CTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCAT...GAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576941.5
CDS-3UTR CAA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGGGGAAGGGGATCCCGTaGTCGGACGTGAAGATCACC +
Preference number: 5 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWGKGIP*SDVKIT
Trigger: GGTGATCTTCACGTCCGACAACGGGATCCCCTTCCC...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp CCTGTCCGCAGACCACGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACCTTGGCCCCAGCGTTTaGGGTGCTCCGGGGATGACA +
Preference number: 5 (lower is better)
Translates to: PVRRPRMSRIPVLGHGSDLGPSV*GAPGMT
Trigger: TGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAG...GTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACGTGGTCTGCGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp CCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGATCTTGAAGTTGAGGTaGTGCACGAGGCGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PASEVDGLRAKDGVAGVRILKLR*CTRRKC
Trigger: GCACTTCCGCCTCGTGCACAACCTCAACTTCAAGAT...CCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CAA 90 bp CAGCGCCGGCAGGAGGGACCGGCCAGTGAGGTGGATGGTCTTCGAGCCAAAGATATGGGAAAGGGCATCTaGAAGTTGAGGTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: QRRQEGPASEVDGLRAKDMGKGI*KLRLCT
Trigger: CGTGCACAACCTCAACTTCAAGATGCCCTTTCCCAT...ATCTTTGGCTCGAAGACCATCCACCTCACTGGCCGGTCCCTCCTGCCGGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CAA 90 bp CCAGAAACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGGACGGAAGGGCTGTaGCCACTACTCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PETPQVQAHHSGSLLPISWTEGL*PLLPRL
Trigger: CAGCCTGGGGAGTAGTGGCAACAGCCCTTCCGTCCA...GCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp TGGTCACATGCTCTGGTCCCCCTCCAGGCAATGGCAAGAGTGACCCCACAGGAAGAAAACAAGACTCCCTaGTCATGGGCTGGGGGCGCT +
Preference number: 5 (lower is better)
Translates to: WSHALVPLQAMARVTPQEENKTP*SWAGGA
Trigger: AGCGCCCCCAGCCCATGACAAGGGAGTCTTGTTTTC...TTCCTGTGGGGTCACTCTTGCCATTGCCTGGAGGGGGACCAGAGCATGTGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS GCA 90 bp ACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTaGACAGGATGGACATCTTCCCCATCGTCATCCACGTCTCAAACA +
Preference number: 5 (lower is better)
Translates to: TPMPSWTSSWTVSAP*TGWTSSPSSSTSQT
Trigger: TGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS GCA 90 bp ACAAAGAACACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTaGACCCTGCACAGGATGGACATCTTCCCCATCGTCATCCACGTC +
Preference number: 5 (lower is better)
Translates to: TKNTHALLDVQLDSV*TLHRMDIFPIVIHV
Trigger: GACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS GCA 90 bp AAGTGGCAAGCTCTATTCCCTCATCTCCTCTACAAAATTCAGCTCTaGCCAGCTCCTGCCCTGCCCTCAGCCTGTCCGGAGGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: KWQALFPHLLYKIQL*PAPALPSACPEGPS
Trigger: AGAAGGGCCCTCCGGACAGGCTGAGGGCAGGGCAGGAGCTGGGCAGAGCTGAATTTTGTAGAGGAGATGAGGGAATAGAGCTTGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS CCA 90 bp GACTCACTTCTTCTCTCCCTCCCACAAAGAACACCCATGCCCTCCTaGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATGGACA +
Preference number: 5 (lower is better)
Translates to: DSLLLSLPQRTPMPS*TSSWTVSAPCTGWT
Trigger: TGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGAAGTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS-3UTR CAA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGGGGAAGGGGATCCCGTaGTCGGACGTGAAGATCACC +
Preference number: 5 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTGKGIP*SDVKIT
Trigger: GGTGATCTTCACGTCCGACAACGGGATCCCCTTCCC...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GGGAAAGGGCATCTTGAAGTTGAGGTTGTGCACGAGGCGGAAGTGCCGGTGCTGAAGGAAGAACCCTCCTaGGATGGGAGTGTGGACGGA +
Preference number: 5 (lower is better)
Translates to: GKGHLEVEVVHEAEVPVLKEEPS*DGSVDG
Trigger: TCCGTCCACACTCCCATCCAAGGAGGGTTCTTCCTT...CAGCACCGGCACTTCCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS CCA 90 bp CCGGACCACCCCGTCTCTCTACGGTTCTCTCTGTGGCCCCGAGGTTaGGAACCTGAATCCGATTTGGTCAGAGCCTCTTTCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: PDHPVSLRFSLWPRG*EPESDLVRASFFII
Trigger: GATGATGAAGAAAGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTAGAGAGACGGGGTGGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp GCTCTCTCCGTTGCCAAACTTCTCACAGAAGGTTCCGTACTGGGGCTGGGAGTGACCTTGTCGAAGGAGTaGAAGTGGTGCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ALSVAKLLTEGSVLGLGVTLSKE*KWCTSW
Trigger: CCAGGACGTGCACCACTTCAACTCCTTCGACAAGGT...CACTCCCAGCCCCAGTACGGAACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CAA 90 bp GTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGCACCAGTCCAACTCCTaGGTCCATGCGGCCGACGGT +
Preference number: 5 (lower is better)
Translates to: VSASPGNLSDMQILEPAKHQSNS*VHAADG
Trigger: ACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTG...CTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp CGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTCTTGGCCCCAGCGTTTaGGGTGCTCCGGGGATGACA +
Preference number: 5 (lower is better)
Translates to: RHHLGTCQTCKFLSPPRSLGPSV*GAPGMT
Trigger: TGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAG...AGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp AGCCTCATTCTTTTCCTCTGTAGAGTGGGAGTGACAGTCCCTTCCTCACCCAGAGTAGGCCTCGCTGACTaGGCCCCAGCGTTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SLILFLCRVGVTVPSSPRVGLAD*APAFWV
Trigger: CACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTAC...TCTGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGAGGAAAAGAATGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp CTCCCACTGCCACTTGGCCAGCTGGTCCCGAAGCATCTCCAGAAGCTGAGCAAAATCTTGAAGTTGAGGTaGTGCACGAGGCGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LPLPLGQLVPKHLQKLSKILKLR*CTRRKC
Trigger: GCACTTCCGCCTCGTGCACAACCTCAACTTCAAGAT...TTTGCTCAGCTTCTGGAGATGCTTCGGGACCAGCTGGCCAAGTGGCAGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS-3UTR CAA 90 bp AATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCCCTGCCATCCTCAGGCCTCCCATTaGCAGGTCCCCAAACCAAGC +
Preference number: 5 (lower is better)
Translates to: NSRAGTWFRHKDNCVPCHPQASH*QVPKPS
Trigger: GCTTGGTTTGGGGACCTGCAAATGGGAGGCCTGAGG...ATGGCAGGGGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS TCA 90 bp CCCCGTCTCTCTACGGTTCTCTCTGTGGCCCCGAGGTTGGGAACCTaGATCCGATTTGGTCAGAGCCTCTTTCTTCATCATCTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PRLSTVLSVAPRLGT*IRFGQSLFLHHLGP
Trigger: TGGCCCTAGATGATGAAGAAAGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTAGAGAGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 90 bp CATGGTGGCGTGCGGTGCGATTGCAGTCCTAGCTACTTTGGAGGCTaGGACAGAAAAATCGCTCGAACCTGGGAGGTGGTGGTTGTAGTG +
Preference number: 5 (lower is better)
Translates to: HGGVRCDCSPSYFGG*DRKIARTWEVVVVV
Trigger: CACTACAACCACCACCTCCCAGGTTCGAGCGATTTTTCTGTCTCAGCCTCCAAAGTAGCTAGGACTGCAATCGCACCGCACGCCACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 90 bp TACGGTTCTCTCTGTGGCCCCGAGGTTGGGAACCTGAATCCGATTTaGTCAGAGCCTCTTTCTTCATCATCTAGGGCCAGGGCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: YGSLCGPEVGNLNPI*SEPLSSSSRARAAS
Trigger: GCTTGCAGCCCTGGCCCTAGATGATGAAGAAAGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp GTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VSASPGNLSDMQILEPAKTEVKA*RKRRLR
Trigger: CCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGT...CTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp AGCCTCATTCTTTTCCTCTGTAGAGTGGGAGTGACAGTCCCTTCCTCACCCAGAGGCAGGCTCCGCACCTaGTCGAAGGAGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SLILFLCRVGVTVPSSPRGRLRT*SKELKW
Trigger: CCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCC...TCTGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGAGGAAAAGAATGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp CCCCGTCCCAGATCCACTCCCACACCTTTCCTGACGGAGACAGACAAAGGCATAATGCCGCTCTCTCCGTaGCCAAACTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: PRPRSTPTPFLTETDKGIMPLSP*PNFSQK
Trigger: CTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCAT...TATGCCTTTGTCTGTCTCCGTCAGGAAAGGTGTGGGAGTGGATCTGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp GGCGACGTAGAGGAAGAAAGGCCGGTCATCCTGAGTCTGCAGGAATTTCCGGACATGCCGCTCTCTCCGTaGCCAAACTTCTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: GDVEEERPVILSLQEFPDMPLSP*PNFSQK
Trigger: CTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCAT...GTCCGGAAATTCCTGCAGACTCAGGATGACCGGCCTTTCTTCCTCTACGTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS-3UTR CAA 90 bp AACACCACAGGTTCAAGCTCATCACTCAGGGAGCCTGCTGCCAATCAGCTGAAAGGGAAGGGGATCCCGTaGTCGGACGTGAAGATCACC +
Preference number: 5 (lower is better)
Translates to: NTTGSSSSLREPAANQLKGKGIP*SDVKIT
Trigger: GGTGATCTTCACGTCCGACAACGGGATCCCCTTCCC...TTTCAGCTGATTGGCAGCAGGCTCCCTGAGTGATGAGCTTGAACCTGTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GGATGGTCTTCGAGCCAAAGATGGCGTAGCTGGGGTACGGGATCGAGAACCAATAAGGGCATCTTGAAGTaGAGGTTGTGCACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GWSSSQRWRSWGTGSRTNKGILK*RLCTRR
Trigger: CCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT...ATTGGTTCTCGATCCCGTACCCCAGCTACGCCATCTTTGGCTCGAAGACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573150.5
ENST00000576856.1
CDS CCA 90 bp AATTTCCGGACGAGCAGCTTAATTCTAGTGATGTTCCGCCCCACCTaGAGGACGGAGCCATTCTCCTCCGTGTACGCAAAGTCAAACGGG +
Preference number: 5 (lower is better)
Translates to: NFRTSSLILVMFRPT*RTEPFSSVYAKSNG
Trigger: CCCGTTTGACTTTGCGTACACGGAGGAGAATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571675.5
ENST00000573150.5
ENST00000575282.5
ENST00000576707.5
CDS CCA 90 bp CCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATaGACATCTTCCCCATCGTCATCCACGTCTCAAACAAACTTGATT +
Preference number: 5 (lower is better)
Translates to: PSWTSSWTVSAPCTG*TSSPSSSTSQTNLI
Trigger: AATCAAGTTTGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS-3UTR CAA 90 bp CGTATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCA +
Preference number: 5 (lower is better)
Translates to: RMSRIPVLGHGSDTRTTVVAMAL*LYAPLS
Trigger: TGAGAGTGGCGCGTACAACAACAGCGCCATCGCCAC...CACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACATACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GAAGAAGCAGAAACCTGCCCAAAGGTCGCTCAAAGGCTTCCTCTAGGCCAGACGATGGGAAAGGGCATCTaGAAGTTGAGGTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: EEAETCPKVAQRLPLGQTMGKGI*KLRLCT
Trigger: CGTGCACAACCTCAACTTCAAGATGCCCTTTCCCAT...CGTCTGGCCTAGAGGAAGCCTTTGAGCGACCTTTGGGCAGGTTTCTGCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp TTAGGAATGAGCAGGGTCATGAGGTGCTTTGGGTCCCCCAGGAAGGCAGGATGGCAGACATGCAAATTCTaGAGCCCGCCAAGATCTACT +
Preference number: 5 (lower is better)
Translates to: LGMSRVMRCFGSPRKAGWQTCKF*SPPRST
Trigger: AGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTG...CCATCCTGCCTTCCTGGGGGACCCAAAGCACCTCATGACCCTGCTCATTCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS TCA 90 bp CATATGCTAAGGAACTCCAAACCCCCAAATCTGACCCAGGTCCTGTaGCTGGAAATATCTGAAGTCTTCACGCAACCTCTGGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: HMLRNSKPPNLTQVL*LEISEVFTQPLGHP
Trigger: CGGGTGCCCCAGAGGTTGCGTGAAGACTTCAGATATTTCCAGTCACAGGACCTGGGTCAGATTTGGGGGTTTGGAGTTCCTTAGCATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS-3UTR CAA 90 bp ATGTCTAGAATTCCCGTGCTGGGACATGGTTCAGACACAAGGACAACTGTGTCCAAGGGCATCTTGAAGTaGAGGTTGTGCACGAGGCGG +
Preference number: 5 (lower is better)
Translates to: MSRIPVLGHGSDTRTTVSKGILK*RLCTRR
Trigger: CCGCCTCGTGCACAACCTCAACTTCAAGATGCCCTT...GGACACAGTTGTCCTTGTGTCTGAACCATGTCCCAGCACGGGAATTCTAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326317.11
ENST00000573150.5
CDS-3UTR CAA 90 bp GGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTACTGAATCGGACACCTTGTCGAAGGAGTaGAAGTGGTGCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GTCQTCKFLSPPRSTESDTLSKE*KWCTSW
Trigger: CCAGGACGTGCACCACTTCAACTCCTTCGACAAGGT...GTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp AGCCTCATTCTTTTCCTCTGTAGAGTGGGAGTGACAGTCCCTTCCTCACCCAGAGAAAAGGCAATGGTTTaGAAAGCAGCAGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: SLILFLCRVGVTVPSSPREKAMV*KAAGSR
Trigger: CCTGGATCCTGCTGCTTTCAAAACCATTGCCTTTTC...TCTGGGTGAGGAAGGGACTGTCACTCCCACTCTACAGAGGAAAAGAATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp GTATCGGCATCACCTGGGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGCCTGGGATTTGCAATTaGGATATTAACAAGCATCCC +
Preference number: 5 (lower is better)
Translates to: VSASPGNLSDMQILEPAKPGICN*DINKHP
Trigger: GGGATGCTTGTTAATATCCAAATTGCAAATCCCAGG...CTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGCCGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS-3UTR CAA 90 bp GGAACTTGTCAGACATGCAAATTCTTGAGCCCGCCAAGATCTACTGAATCGGACGCATCACCTGGGAACTaGTCAGACATGCAAATTCTT +
Preference number: 5 (lower is better)
Translates to: GTCQTCKFLSPPRSTESDASPGN*SDMQIL
Trigger: AAGAATTTGCATGTCTGACAAGTTCCCAGGTGATGC...GTCCGATTCAGTAGATCTTGGCGGGCTCAAGAATTTGCATGTCTGACAAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS CCA 72 bp GCAGCAGCGCGCAGCAGGCGGGCACGGGGCAGCTCATaGCGGCGGCGGCTCGGACTCGGGATCGGGATCCGG +
Preference number: 6 (lower is better)
Translates to: AAARSRRARGSS*RRRLGLGIGIR
Trigger: CCGGATCCCGATCCCGAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573150.5
CDS CAA 90 bp CCCGGCCGTGGCACCCCCTCCAGTGCCCGGTTCTGCAAGCCCACCTaGGTCCATGCGGCCGACGGTGGTGTACTGAGCGGCCAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: PGRGTPSSARFCKPT*VHAADGGVLSGQVG
Trigger: GCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGGCACTGGAGGGGGTGCCACGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 72 bp GACCCCGGCCGTGGCACCCCCTCCAGTGCCCGGTTCTaGAAGCCCACCTTGGTCCATGCGGCCGACGGTGGT +
Preference number: 6 (lower is better)
Translates to: DPGRGTPSSARF*KPTLVHAADGG
Trigger: ACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGGCACTGGAGGGGGTGCCACGGCCGGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp ACTGAGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTaGGGACGAAGTAAGGCACCTGGGGCAGGCGGTGGG +
Preference number: 6 (lower is better)
Translates to: TERPGRLGLPGC*GRSKAPGAGGG
Trigger: CCCACCGCCTGCCCCAGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp CCCGGGATCCCAGGGATGGGAGACGTGGCAGAGGCCTaGGCCCCGGACGCAGCCTGTCTACTCCCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: PGIPGMGDVAEA*APDAACLLPAH
Trigger: GTGGGCAGGGAGTAGACAGGCTGCGTCCGGGGCCCAGGCCTCTGCCACGTCTCCCATCCCTGGGATCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571075.1
CDS TCA 72 bp AGCCCACCTTGGTCCATGCGGCCGACGGTGGTGTACTaGGCGGCCAGGTCGGCTCGGGCTGCCGGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: SPPWSMRPTVVY*AARSARAAGVL
Trigger: CAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CAA 90 bp AGGCTGGCGCGGCTGGGAGAGCAGCTGCTGACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGGCGGGCCAAGGCGTCCAGGTGCGGG +
Preference number: 6 (lower is better)
Translates to: RLARLGEQLLTEVKA*RKRRLRRAKASRCG
Trigger: CCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCAGCAGCTGCTCTCCCAGCCGCGCCAGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS CAA 90 bp CGGCGGGCCAAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCGAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRAKASRCGVAMALL*YAPLSKPPSSARSS
Trigger: GCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576941.5
CDS CAA 90 bp CTGCGGCGGGCCAAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LRRAKASRCGVAMAL*LYAPLSKPPSSARS
Trigger: GCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576941.5
CDS GCA 72 bp GACGGTGGTGTACTGAGCGGCCAGGTCGGCTCGGGCTaGCGGGGTGTTGGGGACGAAGTAAGGCACCTGGGG +
Preference number: 6 (lower is better)
Translates to: DGGVLSGQVGSG*RGVGDEVRHLG
Trigger: CCCCAGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 72 bp AGGGAGGCAGCGGGTGGTGTGTGTAGACCCACCTGCTaGTGCATCCGGCCGCTGGGCTCCAGCGCTTTCCGG +
Preference number: 6 (lower is better)
Translates to: REAAGGVCRPTC*CIRPLGSSAFR
Trigger: CCGGAAAGCGCTGGAGCCCAGCGGCCGGATGCAGCAGCAGGTGGGTCTACACACACCACCCGCTGCCTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp GGAGGCTGCGGCGGGCCAAGGCGTCCAGGTGCGGGGTaGCGATGGCGCTGTTGTTGTACGCGCCACTCTCAA +
Preference number: 6 (lower is better)
Translates to: GGCGGPRRPGAG*RWRCCCTRHSQ
Trigger: TTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS CCA 72 bp GTTCTGCAAGCCCACCTTGGTCCATGCGGCCGACGGTaGTGTACTGAGCGGCCAGGTCGGCTCGGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VLQAHLGPCGRR*CTERPGRLGLP
Trigger: CGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp CCTGGGCGGGAAGAGAGGCCTGTGCGCACACCAGCTTaGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTCG +
Preference number: 6 (lower is better)
Translates to: PGREERPVRTPA*LSSSGRLRTLS
Trigger: CGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGCCTCTCTTCCCGCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS CAA 72 bp GGCACCCCCTCCAGTGCCCGGTTCTGCAAGCCCACCTaGGTCCATGCGGCCGACGGTGGTGTACTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: GTPSSARFCKPT*VHAADGGVLSG
Trigger: GCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGGCACTGGAGGGGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CAA 72 bp GCCTGGGCGGGAAGAGAGGCCTGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTC +
Preference number: 6 (lower is better)
Translates to: AWAGREACAHTS*AEQQRQAPHLV
Trigger: GACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGCCTCTCTTCCCGCCCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS TCA 72 bp GGCGGGAAGAGAGGCCTGTGCGCACACCAGCTTGGCTaGGCAGCAGCGGCAGGCTCCGCACCTTGTCGAAGG +
Preference number: 6 (lower is better)
Translates to: GGKRGLCAHQLG*AAAAGSAPCRR
Trigger: CCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGCCTCTCTTCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS GCA 72 bp CTCCAGTGCCCGGTTCTGCAAGCCCACCTTGGTCCATaGGGCCGACGGTGGTGTACTGAGCGGCCAGGTCGG +
Preference number: 6 (lower is better)
Translates to: LQCPVLQAHLGP*GRRWCTERPGR
Trigger: CCGACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGGCACTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp TGCGGCGGGCCAAGGCGTCCAGGTGCGGGGTGGCGATaGCGCTGTTGTTGTACGCGCCACTCTCAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: CGGPRRPGAGWR*RCCCTRHSQSL
Trigger: GAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS CAA 72 bp CGGCTGGGAGAGCAGCTGCTGACCGAGGTGAAGGCATaGCGAAAGAGGAGGCTGCGGCGGGCCAAGGCGTCC +
Preference number: 6 (lower is better)
Translates to: RLGEQLLTEVKA*RKRRLRRAKAS
Trigger: GGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCAGCAGCTGCTCTCCCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS CAA 90 bp ACGCCCTGTCCTCGGCACGGGGTCCTCACCTGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTCGAAGGAGTT +
Preference number: 6 (lower is better)
Translates to: TPCPRHGVLTCAHTS*AEQQRQAPHLVEGV
Trigger: AACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGTGAGGACCCCGTGCCGAGGACAGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575188.5
CDS TCA 72 bp GGTACACGGTCTCCGGCCCCACGTGCTTCTTCCCGATaGTGCCTGGGCGGGAAGAGAGGCCTGTGCGCACAC +
Preference number: 6 (lower is better)
Translates to: GTRSPAPRASSR*CLGGKRGLCAH
Trigger: GTGTGCGCACAGGCCTCTCTTCCCGCCCAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS TCA 72 bp GATGTTCCGCCCCACCTGTGCGCACACCAGCTTGGCTaGGCAGCAGCGGCAGGCTCCGCACCTTGTCGAAGG +
Preference number: 6 (lower is better)
Translates to: DVPPHLCAHQLG*AAAAGSAPCRR
Trigger: CCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGTGGGGCGGAACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS GCA 72 bp GAGGCAGCGGGTGGTGTGTGTAGACCCACCTGCTGCTaGATCCGGCCGCTGGGCTCCAGCGCTTTCCGGATT +
Preference number: 6 (lower is better)
Translates to: EAAGGVCRPTCC*IRPLGSSAFRI
Trigger: AATCCGGAAAGCGCTGGAGCCCAGCGGCCGGATGCAGCAGCAGGTGGGTCTACACACACCACCCGCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 72 bp CAGCCAGGGCTGGCGGGTGAGTCGGAGCCCCTAGTCTaGACTCACAGCCATAGGCTGTGCCTCCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: QPGLAGESEPLV*THSHRLCLLLE
Trigger: CTCCAGGAGGAGGCACAGCCTATGGCTGTGAGTGCAGACTAGGGGCTCCGACTCACCCGCCAGCCCTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571075.1
CDS CCA 72 bp GCGGTGTCCAGCCTTCTCCCCGGGGCCTCCTGCAAATaGGTTAGCCCAGAACAGCCTCACTCCGGACCACCC +
Preference number: 6 (lower is better)
Translates to: AVSSLLPGASCK*VSPEQPHSGPP
Trigger: GGGTGGTCCGGAGTGAGGCTGTTCTGGGCTAACCCATTTGCAGGAGGCCCCGGGGAGAAGGCTGGACACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp GGAGCTGCCCTCGGAAGGGCCGAACCTACGCCACTCTaGGCGGCTCCCTTCTCCAATCCAATCAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: GAALGRAEPTPL*AAPFSNPISSG
Trigger: CCCGCTGCTGATTGGATTGGAGAAGGGAGCCGCCCAGAGTGGCGTAGGTTCGGCCCTTCCGAGGGCAGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp AGAGCTAAGGGCAGGCCACGGGGGCTGAGCGTGCCTTaGTACAAGGTGCCGAACCTCCTGGGCTCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: RAKGRPRGLSVP*YKVPNLLGSGL
Trigger: CAGGCCAGAGCCCAGGAGGTTCGGCACCTTGTACCAAGGCACGCTCAGCCCCCGTGGCCTGCCCTTAGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575188.5
CDS CCA 72 bp GGTCTCCGGCCCCACGTGCTTCTTCCCGATGATGCCTaGGCGGGAAGAGAGGCCTGTGCGCACACCAGCTTG +
Preference number: 6 (lower is better)
Translates to: GLRPHVLLPDDA*AGREACAHTSL
Trigger: CAAGCTGGTGTGCGCACAGGCCTCTCTTCCCGCCCAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS TCA 72 bp CCCCCAGGCAGCTGCTCCCTGGTGCCCGCCGGCTTTTaGGTTCTCCGGAATCTCGTGTCTGTCCCATGGAGC +
Preference number: 6 (lower is better)
Translates to: PPGSCSLVPAGF*VLRNLVSVPWS
Trigger: GCTCCATGGGACAGACACGAGATTCCGGAGAACTCAAAAGCCGGCGGGCACCAGGGAGCAGCTGCCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp CACGCAGCTCCTGGAGCACCAGTCCAACTCCTGTGGTaGGGGGCCGAGAAGCAGAGCTCAGCCGCAGACACG +
Preference number: 6 (lower is better)
Translates to: HAAPGAPVQLLW*GAEKQSSAADT
Trigger: CGTGTCTGCGGCTGAGCTCTGCTTCTCGGCCCCTCACCACAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp GCCACTCTCAAAGCCTCCGTCATCCGCTGCGTGAGGTaGGAGACAGAGAGTGCACGGTCGGCGAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ATLKASVIRCVR*ETESARSARSS
Trigger: GCTGCTCCTCGCCGACCGTGCACTCTCTGTCTCCCACCTCACGCAGCGGATGACGGAGGCTTTGAGAGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS CAA 72 bp AAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCG +
Preference number: 6 (lower is better)
Translates to: KASRCGVAMALL*YAPLSKPPSSA
Trigger: CGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576941.5
CDS CAA 72 bp GCCAAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCAAAGCCTCCGTCATCC +
Preference number: 6 (lower is better)
Translates to: AKASRCGVAMAL*LYAPLSKPPSS
Trigger: GGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571075.1
ENST00000571675.5
ENST00000572208.5
ENST00000573150.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
ENST00000576941.5
CDS CAA 72 bp CTAGTGATGTTCCGCCCCACCTGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTC +
Preference number: 6 (lower is better)
Translates to: LVMFRPTCAHTS*AEQQRQAPHLV
Trigger: GACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGTGGGGCGGAACATCACTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574505.5
CDS CAA 90 bp GTGCGCACACCAGCTTGGCTGAGCAGCAGCGGCAGGCTCCGCACCTaGTCGAAGGAGTTGAAGTGGTGCACGTCCTGGTGCAGCCCGTAC +
Preference number: 6 (lower is better)
Translates to: VRTPAWLSSSGRLRT*SKELKWCTSWCSPY
Trigger: GTACGGGCTGCACCAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571675.5
ENST00000572208.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
CDS CAA 90 bp CCCGGCCAGTACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTaGTCGGACGTGAAGATCACCAGTGTGTCGTTCAGGACACCGGCG +
Preference number: 6 (lower is better)
Translates to: PGQYRLVLPLGKGIP*SDVKITSVSFRTPA
Trigger: CGCCGGTGTCCTGAACGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326317.11
ENST00000570923.1
ENST00000572257.5
ENST00000573150.5
ENST00000575282.5
CDS CAA 90 bp CGGCGGGCCAAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCTGAATTAACC +
Preference number: 6 (lower is better)
Translates to: RRAKASRCGVAMALL*YAPLSKPPSSAELT
Trigger: GGTTAATTCAGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576707.5
CDS CAA 90 bp CTGCGGCGGGCCAAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTaGTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCTGAATTA +
Preference number: 6 (lower is better)
Translates to: LRRAKASRCGVAMAL*LYAPLSKPPSSAEL
Trigger: TAATTCAGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576707.5
CDS TCA 72 bp GCAGCAGCGGCAGGCTCCGCACCTTGTCGAAGGAGTTaGAGTGGTGCACGTCCTGGTGCAGCCCGTACATCC +
Preference number: 6 (lower is better)
Translates to: AAAAGSAPCRRS*SGARPGAARTS
Trigger: GGATGTACGGGCTGCACCAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571675.5
ENST00000572208.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
CDS TCA 72 bp CCTTTGGGACAAGAGCTAAGGGCAGGCCACGGGGGCTaGGCGTGCCTTGGTACAAGGTGCCGAACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PLGQELRAGHGG*ACLGTRCRTSW
Trigger: CCAGGAGGTTCGGCACCTTGTACCAAGGCACGCTCAGCCCCCGTGGCCTGCCCTTAGCTCTTGTCCCAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575188.5
CDS GCA 72 bp GCGGCTCCCTTCTCCAATCCAATCAGCAGCGGGAGGTaGCTTGTCGAGCCGACACCTCTCACCGCCACGTCA +
Preference number: 6 (lower is better)
Translates to: AAPFSNPISSGR*LVEPTPLTATS
Trigger: TGACGTGGCGGTGAGAGGTGTCGGCTCGACAAGGCACCTCCCGCTGCTGATTGGATTGGAGAAGGGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS GCA 72 bp GTTGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCTaGGTGAGGTGGGAGACAGAGAGTGCACGGTCGGCG +
Preference number: 6 (lower is better)
Translates to: VVRATLKASVIR*VRWETESARSA
Trigger: CGCCGACCGTGCACTCTCTGTCTCCCACCTCACGCAGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570923.1
CDS CCA 72 bp GACGTAGAGGAAGAAAGGCCTGTGCGCACACCAGCTTaGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTCG +
Preference number: 6 (lower is better)
Translates to: DVEEERPVRTPA*LSSSGRLRTLS
Trigger: CGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGCCTTTCTTCCTCTACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571051.5
ENST00000572208.5
CDS CCA 72 bp AGTGTGTCGTTCAGGACACCGGCGTCACGCAGCTCCTaGAGCACCAGTCCAACTCCTGTGGTGAGGGGCCGA +
Preference number: 6 (lower is better)
Translates to: SVSFRTPASRSS*STSPTPVVRGR
Trigger: TCGGCCCCTCACCACAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGACACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CAA 72 bp CCAGCTTGGCTGAGCAGCAGCGGCAGGCTCCGCACCTaGTCGAAGGAGTTGAAGTGGTGCACGTCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: PAWLSSSGRLRT*SKELKWCTSWC
Trigger: GCACCAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571051.5
ENST00000571675.5
ENST00000572208.5
ENST00000574505.5
ENST00000575188.5
ENST00000575282.5
ENST00000576707.5
CDS CAA 72 bp CGACGTAGAGGAAGAAAGGCCTGTGCGCACACCAGCTaGGCTGAGCAGCAGCGGCAGGCTCCGCACCTTGTC +
Preference number: 6 (lower is better)
Translates to: RRRGRKACAHTS*AEQQRQAPHLV
Trigger: GACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCGCACAGGCCTTTCTTCCTCTACGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571051.5
ENST00000572208.5
CDS CAA 72 bp ACCCCCAGGCAGCTGCTCCCTGGTGCCCGCCGGCTTTaGAGTTCTCCGGAATCTCGTGTCTGTCCCATGGAG +
Preference number: 6 (lower is better)
Translates to: TPRQLLPGARRL*SSPESRVCPME
Trigger: CTCCATGGGACAGACACGAGATTCCGGAGAACTCAAAAGCCGGCGGGCACCAGGGAGCAGCTGCCTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CAA 72 bp AAGGCGTCCAGGTGCGGGGTGGCGATGGCGCTGTTGTaGTACGCGCCACTCTCAAAGCCTCCGTCATCCGCT +
Preference number: 6 (lower is better)
Translates to: KASRCGVAMALL*YAPLSKPPSSA
Trigger: AGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAGCGCCATCGCCACCCCGCACCTGGACGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570923.1
ENST00000576707.5
CDS CAA 90 bp TCTGGGCGGCTCCCTTCTCCAATCCAATCAGCAGCGGGAGGTGCCTaGTCGAGCCGACACCTCTCACCGCCACGTCATCTCTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SGRLPSPIQSAAGGA*SSRHLSPPRHLSGP
Trigger: AGGCCCAGAGAGATGACGTGGCGGTGAGAGGTGTCGGCTCGACAAGGCACCTCCCGCTGCTGATTGGATTGGAGAAGGGAGCCGCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp TCCTGCCGCTGGGGAAGGGGATCCCGTTGTCGGACGTaGAGATCACCAGTGTGTCGTTCAGGACACCGGCGT +
Preference number: 6 (lower is better)
Translates to: SCRWGRGSRCRT*RSPVCRSGHRR
Trigger: ACGCCGGTGTCCTGAACGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326317.11
ENST00000570923.1
ENST00000572257.5
ENST00000573150.5
ENST00000575282.5
CDS GCA 72 bp TCGGAGCCCCTAGTCTGCACTCACAGCCATAGGCTGTaGCTCCTCCTGGAGGTGGGAGGGAAAGTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: SEPLVCTHSHRL*LLLEVGGKVGN
Trigger: GTTGCCCACTTTCCCTCCCACCTCCAGGAGGAGGCACAGCCTATGGCTGTGAGTGCAGACTAGGGGCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571075.1
CDS GCA 72 bp GCAAAGTCAAACGGGTACACGGTCTCCGGCCCCACGTaGTTCTTCCCGATGATGCCTGGGCGGGAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: AKSNGYTVSGPT*FFPMMPGREER
Trigger: CCTCTCTTCCCGCCCAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570427.1
CDS GCA 72 bp GCAAAGTCAAACGGGTACACGGTCTCCGGCCCCACGTaGTTCTTCCCGATGATGCCTGTGCGCACACCAGCT +
Preference number: 6 (lower is better)
Translates to: AKSNGYTVSGPT*FFPMMPVRTPA
Trigger: AGCTGGTGTGCGCACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326317.11
ENST00000570923.1
ENST00000571675.5
ENST00000575282.5
ENST00000576707.5
CDS GCA 72 bp CCCTCCTGGACGTCCAGCTGGACAGTGTCTGCACCCTaGACAGGATGGACATCTTCCCCATCGTCATCCACG +
Preference number: 6 (lower is better)
Translates to: PSWTSSWTVSAP*TGWTSSPSSST
Trigger: CGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS GCA 72 bp ACCCATGCCCTCCTGGACGTCCAGCTGGACAGTGTCTaGACCCTGCACAGGATGGACATCTTCCCCATCGTC +
Preference number: 6 (lower is better)
Translates to: THALLDVQLDSV*TLHRMDIFPIV
Trigger: GACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS CCA 72 bp GATTCGAAAGCACCCTGTAGTTCTTCCCAATGGCCCTaGCTCTTGCCCAGCTCTTGCCCAGCTCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: DSKAPCSSSQWP*LLPSSCPAPPS
Trigger: GCTGGGCGGAGCTGGGCAAGAGCTGGGCAAGAGCCAGGGCCATTGGGAAGAACTACAGGGTGCTTTCGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CAA 72 bp CTCCCTTCTCCAATCCAATCAGCAGCGGGAGGTGCCTaGTCGAGCCGACACCTCTCACCGCCACGTCATCTC +
Preference number: 6 (lower is better)
Translates to: LPSPIQSAAGGA*SSRHLSPPRHL
Trigger: GAGATGACGTGGCGGTGAGAGGTGTCGGCTCGACAAGGCACCTCCCGCTGCTGATTGGATTGGAGAAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp GGTACGGGATCGAGAACCAATCCAAGATGGTGGGCGTaGGGTCTGGAAGGGACGCGGCATCTCAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GTGSRTNPRWWA*GLEGTRHLRAA
Trigger: TGCTGCTCTGAGATGCCGCGTCCCTTCCAGACCTCACGCCCACCATCTTGGATTGGTTCTCGATCCCGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp ACTCCGGACCACCCCGTCTCTCTACGGTTCTCTCTGTaGCCCCGAGGTTGGGAACCTGAATCCGATTTGGTC +
Preference number: 6 (lower is better)
Translates to: TPDHPVSLRFSL*PRGWEPESDLV
Trigger: GACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTAGAGAGACGGGGTGGTCCGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp TGTGACTGGAAATATCTGAAGTCTTCACGCAACCTCTaGGGCACCCGAAGGCCCCAGCCCAGGAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: CDWKYLKSSRNL*GTRRPQPRSRS
Trigger: GGACCTGCTCCTGGGCTGGGGCCTTCGGGTGCCCCAGAGGTTGCGTGAAGACTTCAGATATTTCCAGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp GATCGAGAACCAATCCAAGATGGTGGGCGTGAGGTCTaGAAGGGACGCGGCATCTCAGAGCAGCAGAGCCCT +
Preference number: 6 (lower is better)
Translates to: DREPIQDGGREV*KGRGISEQQSP
Trigger: AGGGCTCTGCTGCTCTGAGATGCCGCGTCCCTTCCAGACCTCACGCCCACCATCTTGGATTGGTTCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CAA 72 bp TACAGGTTGGTCCTGCCGCTGGGGAAGGGGATCCCGTaGTCGGACGTGAAGATCACCAGTGTGTCGTTCAGG +
Preference number: 6 (lower is better)
Translates to: YRLVLPLGKGIP*SDVKITSVSFR
Trigger: CCTGAACGACACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326317.11
ENST00000570923.1
ENST00000572257.5
ENST00000573150.5
ENST00000575282.5
CDS CCA 72 bp CCCGTCTCTCTACGGTTCTCTCTGTGGCCCCGAGGTTaGGAACCTGAATCCGATTTGGTCAGAGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: PVSLRFSLWPRG*EPESDLVRASF
Trigger: GAAAGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTAGAGAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp CTAGGCCTTCAGGGGAGCATGGCCCTGCTGACACCTTaGTTTCAAACTTCTGGCCTCCTGAACTGTGGGAGT +
Preference number: 6 (lower is better)
Translates to: LGLQGSMALLTP*FQTSGLLNCGS
Trigger: ACTCCCACAGTTCAGGAGGCCAGAAGTTTGAAATCAAGGTGTCAGCAGGGCCATGCTCCCCTGAAGGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp ACGAGCAGCTTAATTCTAGTGATGTTCCGCCCCACCTaGAGGACGGAGCCATTCTCCTCCGTGTACGCAAAG +
Preference number: 6 (lower is better)
Translates to: TSSLILVMFRPT*RTEPFSSVYAK
Trigger: CTTTGCGTACACGGAGGAGAATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326317.11
ENST00000570427.1
ENST00000570923.1
ENST00000571675.5
ENST00000572257.5
ENST00000573150.5
ENST00000575282.5
ENST00000576707.5
CDS CCA 72 bp CTCTGTGGCCCCGAGGTTGGGAACCTGAATCCGATTTaGTCAGAGCCTCTTTCTTCATCATCTAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LCGPEVGNLNPI*SEPLSSSSRAR
Trigger: CCTGGCCCTAGATGATGAAGAAAGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp ACGTCCAGCTGGACAGTGTCTGCACCCTGCACAGGATaGACATCTTCCCCATCGTCATCCACGTCTCAAACA +
Preference number: 6 (lower is better)
Translates to: TSSWTVSAPCTG*TSSPSSSTSQT
Trigger: TGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACTGTCCAGCTGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1
CDS CAA 90 bp GCCGACACCTCTCACCGCCACGTCATCTCTCTGGGCCTCAGTGCCTaGAATGGTATAACAAGAGGCCCTGATTCGGTGACATTTAGGATC +
Preference number: 6 (lower is better)
Translates to: ADTSHRHVISLGLSA*NGITRGPDSVTFRI
Trigger: GATCCTAAATGTCACCGAATCAGGGCCTCTTGTTATACCATTCAAGGCACTGAGGCCCAGAGAGATGACGTGGCGGTGAGAGGTGTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp AGGGAAATGGCAAAGGTCCTGACCTCCTGTCGTCCCTaGCCCCAAAAGACATGTGTGCTGGAATCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: REMAKVLTSCRP*PQKTCVLESVK
Trigger: CTTCACAGATTCCAGCACACATGTCTTTTGGGGTCAGGGACGACAGGAGGTCAGGACCTTTGCCATTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp TCTACGGTTCTCTCTGTGGCCCCGAGGTTGGGAACCTaGATCCGATTTGGTCAGAGCCTCTTTCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: STVLSVAPRLGT*IRFGQSLFLHH
Trigger: ATGATGAAGAAAGAGGCTCTGACCAAATCGGATTCAGGTTCCCAACCTCGGGGCCACAGAGAGAACCGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS CCA 72 bp GAGCATGGCCCTGCTGACACCTTGATTTCAAACTTCTaGCCTCCTGAACTGTGGGAGTACAAATTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: EHGPADTLISNF*PPELWEYKFWL
Trigger: CAACCAAAATTTGTACTCCCACAGTTCAGGAGGCCAGAAGTTTGAAATCAAGGTGTCAGCAGGGCCATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575282.5
CDS TCA 72 bp ACAAACTTGATTTCAAATCTGGCCTCTCCAGAATCTTaGTACCAGGATGACGGTGCCTTTTACAGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: TNLISNLASPES*YQDDGAFYSGQ
Trigger: TTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCCAGATTTGAAATCAAGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575484.1