Pregenerated sensors for SGPP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000126821Ensembl transcript IDs: ENST00000247225.7, ENST00000645915.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCAAAAGCCTAATTCTGACCTGGCTTTACCTGGAATATATTTTTaGGTATCAGTAACTGATACCCTCCTTTCTTATCATAAACAATAC | + |
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Preference number: 1 (lower is better) Translates to: LQKPNSDLALPGIYF*VSVTDTLLSYHKQY Trigger: GTATTGTTTATGATAAGAAAGGAGGGTATCAGTTACTGATACCCAAAAATATATTCCAGGTAAAGCCAGGTCAGAATTAGGCTTTTGCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTTGGGTATCAGTAACTaGTACCCTCCTTTCTTATCA | + |
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Preference number: 2 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYLGISN*YPPFLS Trigger: TGATAAGAAAGGAGGGTATCAGTTACTGATACCCAA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAGCCTAATTCTGACCTaGCTTTACCTGGAATATATT | + |
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Preference number: 2 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYSLILT*LYLEYI Trigger: AATATATTCCAGGTAAAGCCAGGTCAGAATTAGGCT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCCTGGAATATATTTTTaGGTATCAGTAACTGATACC | + |
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Preference number: 2 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYPGIYF*VSVTDT Trigger: GGTATCAGTTACTGATACCCAAAAATATATTCCAGG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCCTGGAATATATTTTTaGGTATCAGTAACTGATACC | + |
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Preference number: 2 (lower is better) Translates to: NGSVKTGSKSMYSSICILPGIYF*VSVTDT Trigger: GGTATCAGTTACTGATACCCAAAAATATATTCCAGG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| 3UTR CCA 72 bp | CCTAATTCTGACCTGGCTTTACCTGGAATATATTTTTaGGTATCAGTAACTGATACCCTCCTTTCTTATCAT | + |
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Preference number: 3 (lower is better) Translates to: PNSDLALPGIYF*VSVTDTLLSYH Trigger: ATGATAAGAAAGGAGGGTATCAGTTACTGATACCCAAAAATATATTCCAGGTAAAGCCAGGTCAGAATTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCTGTCCCCGCGCTCCTaGCCAGCGGCAGCGGAACCG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYLSPRS*PAAAEP Trigger: CGGTTCCGCTGCCGCTGGCCAGGAGCGCGGGGACAG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATGGCTTGGCCGGGCACTaGTTGCGGTCGCTCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYGLAGH*LRSLPG Trigger: TCCCGGGAGCGACCGCAATCAGTGCCCGGCCAAGCC...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCTGTCCCCGCGCTCCTaGCCAGCGGCAGCGGAACCG | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILLSPRS*PAAAEP Trigger: CGGTTCCGCTGCCGCTGGCCAGGAGCGCGGGGACAG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCTCACGCGGGCCAGCTaGCCCTCCTCGCCCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILLTRAS*PSSPVS Trigger: GCTGACGGGCGAGGAGGGCCAGCTGGCCCGCGTGAG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGGGCTTGGCCGGGCACTaGTTGCGGTCGCTCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILGLAGH*LRSLPG Trigger: TCCCGGGAGCGACCGCAATCAGTGCCCGGCCAAGCC...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTGGCCGGGCACTGATTaGGGTCGCTCCCGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYWPGTD*GRSREA Trigger: AGCCTCCCGGGAGCGACCGCAATCAGTGCCCGGCCA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAGACGGCCAACCAGCTaGGCCAGGCGCTGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYRRPTS*ARRCLS Trigger: GCTGAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCGCCGCCGTCCGGCTTaGCCGGGCACTGATTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILRRRPA*PGTDCG Trigger: ACCGCAATCAGTGCCCGGCCAAGCCGGACGGCGGCG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATGCCTCGGCCAGCGGATaGTGTCCTTGGTGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYASASG*CPWCTG Trigger: GCCAGTGCACCAAGGACATCATCCGCTGGCCGAGGC...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAGTAGAGCGGCCAGTTaGTCACGCGGGCCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYSRAAS*SRGPAG Trigger: GCCAGCTGGCCCGCGTGAGCAACTGGCCGCTCTACT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAGACGGCCAACCAGCTaGGCCAGGCGCTGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILRRPTS*ARRCLS Trigger: GCTGAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTGGCGGTGCCGGACATaGCATGGGTGGAGGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYWRCRT*HGWRAC Trigger: GCATGCCCTCCACCCATGCCATGTCCGGCACCGCCA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGGCCTCGGCCAGCGGATaGTGTCCTTGGTGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILASASG*CPWCTG Trigger: GCCAGTGCACCAAGGACATCATCCGCTGGCCGAGGC...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATACCCCGCACAGCCGCTaGAAACGGGCCACTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYTPHSR*KRATFC Trigger: GCAGAAAGTGGCCCGTTTCCAGCGGCTGTGCGGGGT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAGCTGGGCCAGGCGCTaGCTCAGCGACATGATAACG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYSWARR*LSDMIT Trigger: CGTTATCATGTCGCTGAGGCAGCGCCTGGCCCAGCT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATACTTTCTGCGGGTCCTaGAGACGGCCAACCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYTFCGS*RRPTSW Trigger: CCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAAATGGGGATGGCGGTaGCGGACATGGCATGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYKWGWR*RTWHGW Trigger: CCACCCATGCCATGTCCGGCACCGCCATCCCCATTT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATGTGCCGGACATGGCATaGGTGGAGGGCATGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYVPDMA*VEGMLY Trigger: GTACAGCATGCCCTCCACCCATGCCATGTCCGGCAC...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAGCTGGGCCAGGCGCTaGCTCAGCGACATGATAACG | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILSWARR*LSDMIT Trigger: CGTTATCATGTCGCTGAGGCAGCGCCTGGCCCAGCT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGACTTTCTGCGGGTCCTaGAGACGGCCAACCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILTFCGS*RRPTSW Trigger: CCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAAACGGGCCACTTTCTaGGGGTCCTGCAGACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILKRATF*GSCRRP Trigger: TGGCCGTCTGCAGGACCCGCAGAAAGTGGCCCGTTT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCGTTGCCCAGCTCCGTaGCGAAGCAGAACAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILRCPAP*RSRTGS Trigger: ACTGCCTGTTCTGCTTCGGCACGGAGCTGGGCAACG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCGGACATGGCATGGGTaGAGGGCATGCTGTACTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYRTWHG*RACCTQ Trigger: CTGAGTACAGCATGCCCTCCACCCATGCCATGTCCG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTGTAGAAGAGTTCGTTaGCCAGCTCCGTGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYCRRVR*PAPCRS Trigger: GCTTCGGCACGGAGCTGGGCAACGAACTCTTCTACA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYMSLVH*PRYMTS Trigger: GCTGGTCATGTACCTGGGCCAGTGCACCAAGGACAT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCGGACATGGCATGGGTaGAGGGCATGCTGTACTCAG | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILRTWHG*RACCTQ Trigger: CTGAGTACAGCATGCCCTCCACCCATGCCATGTCCG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILMSLVH*PRYMTS Trigger: GCTGGTCATGTACCTGGGCCAGTGCACCAAGGACAT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCATGGGTGGAGGGCATaGTGTACTCAGAGTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYHGWRA*CTQSCR Trigger: TCTACAACTCTGAGTACAGCATGCCCTCCACCCATG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTCCAGGTGTCAAGAGTaGAAGAAAAGATCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYSRCQE*KKRSPK Trigger: CTTTGGGGATCTTTTCTTTCACTCTTGACACCTGGA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCAAATACCATCCCTATaGGGATCCGCAATATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYQIPSL*GSAIWL Trigger: AAGCCATATTGCGGATCCTCATAGGGATGGTATTTG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATATCCCCAAAGCTAAATaGAGCCCGATGATGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYIPKAK*SPMMMN Trigger: ATTCATCATCATCGGGCTTCATTTAGCTTTGGGGAT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGTCCAGGTGTCAAGAGTaGAAGAAAAGATCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILSRCQE*KKRSPK Trigger: CTTTGGGGATCTTTTCTTTCACTCTTGACACCTGGA...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCAAATACCATCCCTATaGGGATCCGCAATATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILQIPSL*GSAIWL Trigger: AAGCCATATTGCGGATCCTCATAGGGATGGTATTTG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAACATGAGATCCACATaGAATTCCAGCACCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILNMRST*NSSTTS Trigger: GGAAGTGGTGCTGGAATTGCATGTGGATCTCATGTT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATATTTGTGAGTTTGGTTaGAGTTGTCAATCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYICEFG*SCQSGP Trigger: TGGACCTGATTGACAACTTCAACCAAACTCACAAAT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGATCCCCAAAGCTAAATaGAGCCCGATGATGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILIPKAK*SPMMMN Trigger: ATTCATCATCATCGGGCTTCATTTAGCTTTGGGGAT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCATCACACGGTATATTaGAGATTTTGCAGGCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYHHTVY*RFCRLK Trigger: CTTTAGCCTGCAAAATCTTCAATATACCGTGTGATG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAACGTTTCCATTCACTaGAAATACCTACCTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYNVSIH*KYLPAV Trigger: TACTGCAGGTAGGTATTTCCAGTGAATGGAAACGTT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAGGCTAAAGGAATGGTaGTCTTTTTCATTACATCTC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYRLKEW*SFSLHL Trigger: GAGATGTAATGAAAAAGATCACCATTCCTTTAGCCT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCATCACACGGTATATTaGAGATTTTGCAGGCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILHHTVY*RFCRLK Trigger: CTTTAGCCTGCAAAATCTTCAATATACCGTGTGATG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGTTGGGTATCAGTAACTaGTACCCTCCTTTCTTATCA | + |
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Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILLGISN*YPPFLS Trigger: TGATAAGAAAGGAGGGTATCAGTTACTGATACCCAA...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTGCTTTGTTTACATATaGAGTATGTGCATTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYCFVYI*SMCIVP Trigger: TGGGACAATGCACATACTTCATATGTAAACAAAGCA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATAGTTCAACTTCCATGTaGTGTCTTGCTTTTCGAATA | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYSSTSM*CLAFRI Trigger: TATTCGAAAAGCAAGACAGCACATGGAAGTTGAACT...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCTGGAAATACCTACCTaGAGTATAAACAATCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYLEIPT*SINNQD Trigger: GTCTTGATTGTTTATACTGCAGGTAGGTATTTCCAG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAACGTTTCCATTCACTaGAAATACCTACCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILNVSIH*KYLPAV Trigger: TACTGCAGGTAGGTATTTCCAGTGAATGGAAACGTT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCATAGGCCCAAATTATaGGAAACGGTCCCTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILHRPKL*ETVPKI Trigger: AATTTTAGGGACCGTTTCCCATAATTTGGGCCTATG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR TCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAGGCTAAAGGAATGGTaGTCTTTTTCATTACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILRLKEW*SFSLHL Trigger: GAGATGTAATGAAAAAGATCACCATTCCTTTAGCCT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAGTTCAACTTCCATGTaGTGTCTTGCTTTTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILSSTSM*CLAFRI Trigger: TATTCGAAAAGCAAGACAGCACATGGAAGTTGAACT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR GCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCTGGAAATACCTACCTaGAGTATAAACAATCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILLEIPT*SINNQD Trigger: GTCTTGATTGTTTATACTGCAGGTAGGTATTTCCAG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAGCCTAATTCTGACCTaGCTTTACCTGGAATATATT | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILSLILT*LYLEYI Trigger: AATATATTCCAGGTAAAGCCAGGTCAGAATTAGGCT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATGTAGCATATGCATTCTaGTCTAGTAATTACGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYVAYAF*SSNYAI Trigger: AATTGCGTAATTACTAGACCAGAATGCATATGCTAC...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CCA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGGTAGCATATGCATTCTaGTCTAGTAATTACGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: NGSVKTGSKSMYSSICILVAYAF*SSNYAI Trigger: AATTGCGTAATTACTAGACCAGAATGCATATGCTAC...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | AGTTGCTCACGCGGGCCAGCTGGCCCTCCTCGCCCGTCAGCGAGTTaGGGCGCAGAGCGCCCGCGCGCCGCGGCGAGGCCGGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSRGPAGPPRPSAS*GAERPRAAARPGPA Trigger: AGCTGGGCCCGGCCTCGCCGCGGCGCGCGGGCGCTCTGCGCCGCAACTCGCTGACGGGCGAGGAGGGCCAGCTGGCCCGCGTGAGCAACT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CCA 90 bp | CCAGCCCGTTCCGCACGCCGTTGGGGGCGCCGCCGCCGTCCGGCTTaGCCGGGCACTGATTGCGGTCGCTCCCGGGAGGCTGGGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PARSARRWGRRRRPA*PGTDCGRSREAGGL Trigger: GAGGCCCCCAGCCTCCCGGGAGCGACCGCAATCAGTGCCCGGCCAAGCCGGACGGCGGCGGCGCCCCCAACGGCGTGCGGAACGGGCTGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | TTGCGGTCGCTCCCGGGAGGCTGGGGGCCTCCAGGCGCCCCTGGCTaGCGCCCTCGCAGTCGAGGGTCTCCGGCGAGAGGCGCCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSLPGGWGPPGAPG*RPRSRGSPARGASA Trigger: AGCGGAGGCGCCTCTCGCCGGAGACCCTCGACTGCGAGGGCGGCAGCCAGGGGCGCCTGGAGGCCCCCAGCCTCCCGGGAGCGACCGCAA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | GGCGGCGCTTCCACCCCGCACAGCCGCTGGAAACGGGCCACTTTCTaGGGGTCCTGCAGACGGCCAACCAGCTGGGCCAGGCGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGASTPHSRWKRATF*GSCRRPTSWARRCL Trigger: GAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGTGGCCCGTTTCCAGCGGCTGTGCGGGGTGGAAGCGCCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | TCCACCCCGCACAGCCGCTGGAAACGGGCCACTTTCTGCGGGTCCTaGAGACGGCCAACCAGCTGGGCCAGGCGCTGCCTCAGCGACATG | + |
|
Preference number: 5 (lower is better) Translates to: STPHSRWKRATFCGS*RRPTSWARRCLSDM Trigger: CATGTCGCTGAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGTGGCCCGTTTCCAGCGGCTGTGCGGGGTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | TGCCCAGCTCCGTGCCGAAGCAGAACAGGCAGTAGAGCGGCCAGTTaGTCACGCGGGCCAGCTGGCCCTCCTCGCCCGTCAGCGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPAPCRSRTGSRAAS*SRGPAGPPRPSASC Trigger: GCAACTCGCTGACGGGCGAGGAGGGCCAGCTGGCCCGCGTGAGCAACTGGCCGCTCTACTGCCTGTTCTGCTTCGGCACGGAGCTGGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CCA 90 bp | GGCGGCGAGGCGGGCCTCGGCCAGCGGATGATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGCACCCAGATGACCACGAGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GGEAGLGQRMMSLVH*PRYMTSTQMTTSLR Trigger: CCGGAGGCTCGTGGTCATCTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCGAGGCCCGCCTCGCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | AGAAGGGGAAGAACAGGATGTAGAAGAGTTCGTTGCCCAGCTCCGTaGCGAAGCAGAACAGGCAGTAGAGCGGCCAGTTGCTCACGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGRTGCRRVRCPAP*RSRTGSRAASCSRG Trigger: CCCGCGTGAGCAACTGGCCGCTCTACTGCCTGTTCTGCTTCGGCACGGAGCTGGGCAACGAACTCTTCTACATCCTGTTCTTCCCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CAA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYQRMMS*VHWPRY Trigger: GTACCTGGGCCAGTGCACCAAGGACATCATCCGCTG...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CAA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NGSVKTGSKSMYSSICILQRMMS*VHWPRY Trigger: GTACCTGGGCCAGTGCACCAAGGACATCATCCGCTG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 90 bp | ATAGGTAATATACCGATAAGGAAGTTCAACTTCCATGTGCTGTCTTaGTTTTCGAATATCATCACACGGTATATTGAAGATTTTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IGNIPIRKFNFHVLS*FSNIITRYIEDFAG Trigger: GCCTGCAAAATCTTCAATATACCGTGTGATGATATTCGAAAAGCAAGACAGCACATGGAAGTTGAACTTCCTTATCGGTATATTACCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CAA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGCTTCCATGTGCTGTCTaGCTTTTCGAATATCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: NGSVKTGSKSMYSSICILLPCAV*LFEYHH Trigger: GTGATGATATTCGAAAAGCAAGACAGCACATGGAAG...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CAA 90 bp | AGCTCACCTAAAACAGTATCTGGATGTGCAATGATAAAATGCACTGACTCTTATTCATCACACGGTATATaGAAGATTTTGCAGGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSPKTVSGCAMIKCTDSYSSHGI*KILQAK Trigger: TTTAGCCTGCAAAATCTTCAATATACCGTGTGATGA...ATAAGAGTCAGTGCATTTTATCATTGCACATCCAGATACTGTTTTAGGTGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CAA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGAGCATATTTGTGAGTTaGGTTGAAGTTGTCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: NGSVKTGSKSMYSSICILSIFVS*VEVVNQ Trigger: CTGATTGACAACTTCAACCAAACTCACAAATATGCT...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS-3UTR CAA 90 bp | AATGGCAGTGTAAAAACAGGCAGTAAATCAATGTATAGTAGCATATGCATTCTGTCATCACACGGTATATaGAAGATTTTGCAGGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: NGSVKTGSKSMYSSICILSSHGI*KILQAK Trigger: TTTAGCCTGCAAAATCTTCAATATACCGTGTGATGA...CAGAATGCATATGCTACTATACATTGATTTACTGCCTGTTTTTACACTGCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CCA 72 bp | TCCGCACGCCGTTGGGGGCGCCGCCGCCGTCCGGCTTaGCCGGGCACTGATTGCGGTCGCTCCCGGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SARRWGRRRRPA*PGTDCGRSREA Trigger: AGCCTCCCGGGAGCGACCGCAATCAGTGCCCGGCCAAGCCGGACGGCGGCGGCGCCCCCAACGGCGTGCGGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CCA 72 bp | GAGCGGCGCGGCGGCGCTTCCACCCCGCACAGCCGCTaGAAACGGGCCACTTTCTGCGGGTCCTGCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: ERRGGASTPHSR*KRATFCGSCRR Trigger: CCGTCTGCAGGACCCGCAGAAAGTGGCCCGTTTCCAGCGGCTGTGCGGGGTGGAAGCGCCGCCGCGCCGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 72 bp | CACAGCCGCTGGAAACGGGCCACTTTCTGCGGGTCCTaGAGACGGCCAACCAGCTGGGCCAGGCGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSRWKRATFCGS*RRPTSWARRCL Trigger: GAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGTGGCCCGTTTCCAGCGGCTGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 72 bp | CCGTGCCGAAGCAGAACAGGCAGTAGAGCGGCCAGTTaGTCACGCGGGCCAGCTGGCCCTCCTCGCCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCRSRTGSRAAS*SRGPAGPPRPS Trigger: TGACGGGCGAGGAGGGCCAGCTGGCCCGCGTGAGCAACTGGCCGCTCTACTGCCTGTTCTGCTTCGGCACGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CAA 72 bp | GGCGGCGAGGCGGGCCTCGGCCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTACATGACCAGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGEAGLGQRMMS*VHWPRYMTSTQ Trigger: CTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCGAGGCCCGCCTCGCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CCA 72 bp | GCGGGCCTCGGCCAGCGGATGATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGCACCCAGATGACCACG | + |
|
Preference number: 6 (lower is better) Translates to: AGLGQRMMSLVH*PRYMTSTQMTT Trigger: CGTGGTCATCTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCGAGGCCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS CCA 72 bp | GCCACTTTCTGCGGGTCCTGCAGACGGCCAACCAGCTaGGCCAGGCGCTGCCTCAGCGACATGATAACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ATFCGSCRRPTS*ARRCLSDMITE Trigger: TTCCGTTATCATGTCGCTGAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 72 bp | AGAACAGGATGTAGAAGAGTTCGTTGCCCAGCTCCGTaGCGAAGCAGAACAGGCAGTAGAGCGGCCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTGCRRVRCPAP*RSRTGSRAASC Trigger: GCAACTGGCCGCTCTACTGCCTGTTCTGCTTCGGCACGGAGCTGGGCAACGAACTCTTCTACATCCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS GCA 72 bp | TCCAGAAGGGGAAGAACAGGATGTAGAAGAGTTCGTTaGCCAGCTCCGTGCCGAAGCAGAACAGGCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRRGRTGCRRVR*PAPCRSRTGSR Trigger: TCTACTGCCTGTTCTGCTTCGGCACGGAGCTGGGCAACGAACTCTTCTACATCCTGTTCTTCCCCTTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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| CDS TCA 72 bp | CTGTGTCTCCTCGGGATGTGCTCCAGGTGTCAAGAGTaGAAGAAAAGATCCCCAAAGCTAAATGAAGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LCLLGMCSRCQE*KKRSPKLNEAR Trigger: TCGGGCTTCATTTAGCTTTGGGGATCTTTTCTTTCACTCTTGACACCTGGAGCACATCCCGAGGAGACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247225.7 ENST00000645915.2 |
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