RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SGO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129810

Ensembl transcript IDs: ENST00000263753.8, ENST00000306698.6, ENST00000412997.6, ENST00000417364.1, ENST00000419233.6, ENST00000421451.5, ENST00000425061.5, ENST00000437051.5, ENST00000442720.5, ENST00000443724.5, ENST00000452020.5, ENST00000456624.1

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGCAATGGCTCACTCTGTTTGTGTACTCTTACAGATCCTCTCCTaGAGCAACAGAAAGAGGTGTAGATTGAATTTAAACAATATCCAA +
Preference number: 1 (lower is better)
Translates to: MAMAHSVCVLLQILS*SNRKRCRLNLNNIQ
Trigger: TTGGATATTGTTTAAATTCAATCTACACCTCTTTCTGTTGCTTCAGGAGAGGATCTGTAAGAGTACACAAACAGAGTGAGCCATTGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412997.6
ENST00000437051.5
ENST00000442720.5
3UTR-3UTR TCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAATTATGTATGTAGGCTaGGTGAAACAGACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPIMYVG*VKQTVN
Trigger: GTTGACAGTCTGTTTCACTCAGCCTACATACATAAT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
3UTR-3UTR TCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACAATTATGTATGTAGGCTaGGTGAAACAGACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTIMYVG*VKQTVN
Trigger: GTTGACAGTCTGTTTCACTCAGCCTACATACATAAT...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
3UTR-3UTR CAA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAGTCACCCTGGGAAAGTaGCTATCTCTAATTAAAGGG +
Preference number: 3 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPVTLGK*LSLIKG
Trigger: CCCTTTAATTAGAGATAGCAACTTTCCCAGGGTGAC...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
3UTR CCA 72 bp GTTTATGAGCTAGGGTCCTGTCAAGAGAATATTCTATaGCAATGGCTCACTCTGTTTGTGTACTCTTACAGA +
Preference number: 3 (lower is better)
Translates to: VYELGSCQENIL*QWLTLFVYSYR
Trigger: TCTGTAAGAGTACACAAACAGAGTGAGCCATTGCCATAGAATATTCTCTTGACAGGACCCTAGCTCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412997.6
ENST00000437051.5
ENST00000442720.5
CDS-3UTR CCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGCTAGCCCCGCGCACTaGGCCCTCCAGGACCGTACC +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLASPAH*ALQDRT
Trigger: GGTACGGTCCTGGAGGGCCCAGTGCGCGGGGCTAGC...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAACGCGGCGACCCTCCTaGCGCAGGCGCGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNATRRPS*RRRVQN
Trigger: GTTCTGGACGCGCCTGCGGCAGGAGGGTCGCCGCGT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGCTAGCCCCGCGCACTaGGCCCTCCAGGACCGTACC +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAASPAH*ALQDRT
Trigger: GGTACGGTCCTGGAGGGCCCAGTGCGCGGGGCTAGC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTACGCGGCGACCCTCCTaGCGCAGGCGCGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTTRRPS*RRRVQN
Trigger: GTTCTGGACGCGCCTGCGGCAGGAGGGTCGCCGCGT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACGCGGCGACCCTCCTaGCGCAGGCGCGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWTRRPS*RRRVQN
Trigger: GTTCTGGACGCGCCTGCGGCAGGAGGGTCGCCGCGT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTGGGGCTGGCGGAAGTaGACGCGGCGACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWWGWRK*TRRPSC
Trigger: GCAGGAGGGTCGCCGCGTCCACTTCCGCCAGCCCCA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTGGGGCTGGCGGAAGTaGACGCGGCGACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTWGWRK*TRRPSC
Trigger: GCAGGAGGGTCGCCGCGTCCACTTCCGCCAGCCCCA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCATGCTTCTTTGGCAGGTaGTACCTCCAGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPCFFGR*YLQGSF
Trigger: AAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGCA...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAGGCCATCTTTTGCCTTaGCCACTACTTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPGHLLP*PLLLQQ
Trigger: CTGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCC...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAGGTGACTGGTCTATCTaGATTGCTCGTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTGDWSI*IARGIL
Trigger: CAGAATCCCACGAGCAATTCAGATAGACCAGTCACC...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR TCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAGGCTAAGATGAGGTaGCTGCTGAGTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTQAKMR*LLSFRW
Trigger: CCACCTGAAACTCAGCAGTCACCTCATCTTAGCCTG...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp AGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATCCAGGCTAAGATGAGGTaGCTGCTGAGTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RFYYVCRLSETDCQHPSIQAKMR*LLSFRW
Trigger: CCACCTGAAACTCAGCAGTCACCTCATCTTAGCCTG...GATGGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCTTGGCCATCTTTTaGCTTGGCCACTACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPSLAIF*LGHYFC
Trigger: GCAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGA...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATCCTTGGCCATCTTTTaGCTTGGCCACTACTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSLAIF*LGHYFC
Trigger: GCAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGA...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAAGCTGTCATCACTATTaGGGTCCATTCCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPSCHHY*GPFQRN
Trigger: GTTCCTCTGGAATGGACCCCAATAGTGATGACAGCT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAGGTAGGAGTTTTTGTTaGCTTAGAACCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPGRSFC*LRTLRL
Trigger: GAGACGGAGGGTTCTAAGCCAACAAAAACTCCTACC...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CCA 90 bp AGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATCGTTTCGAAGCGAGGGTaGGCTCCTTATAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: RFYYVCRLSETDCQHPSIVSKRG*APYSSR
Trigger: GCGTGAACTATAAGGAGCCCACCCTCGCTTCGAAAC...GATGGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACATGCTTCTTTGGCAGGTaGTACCTCCAGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTCFFGR*YLQGSF
Trigger: AAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGCA...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCATTCAGGTGGTGTAGCTaGATCAAAATCAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPFRWCS*IKINSQ
Trigger: CTGGGAGTTGATTTTGATTCAGCTACACCACCTGAA...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419233.6
CDS-3UTR GCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACACTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTLGHYF*NSYLPP
Trigger: AGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAG...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCCTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPLGHYF*NSYLPP
Trigger: AGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAG...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCTCCTTGGCCATCTTTTaGCTTGGCCACTACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSSLAIF*LGHYFC
Trigger: GCAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGA...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCTCAGGCATCTTTCCTTaGCCATCTTTTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSSGIFP*PSFALA
Trigger: GGCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGA...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACATCAGGCATCTTTCCTTaGCCATCTTTTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTSGIFP*PSFALA
Trigger: GGCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGA...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAAGCTGTCATCACTATTaGGGTCCATTCCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSCHHY*GPFQRN
Trigger: GTTCCTCTGGAATGGACCCCAATAGTGATGACAGCT...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAGAATGTACTTGCAAGTaGGCAAATAGAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPECTCK*ANRGHR
Trigger: CCGATGACCTCTATTTGCCCACTTGCAAGTACATTC...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAAGGCAGAGCCACTGCTaGGCTTGCTTTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPRQSHC*ACFILF
Trigger: AAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCATTCTCAGCTGTAGGATaGTATCTTGGGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPFSAVG*YLGLLS
Trigger: TGAAAGAAGCCCAAGATATCATCCTACAGCTGAGAA...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCACAGGCTAAGATGAGGTaGCTGCTGAGTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAQAKMR*LLSFRW
Trigger: CCACCTGAAACTCAGCAGTCACCTCATCTTAGCCTG...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAAGTTTTCTAAGGATGTaGAGCCCGTGGACTTTACCT +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSFLRM*SPWTLP
Trigger: AGGTAAAGTCCACGGGCTTCACATCCTTAGAAAACT...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAAAGGCAATCTCCAAGTaGCACAACCAAAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPKAISK*HNQKET
Trigger: AGTTTCCTTTTGGTTGTGTCACTTGGAGATTGCCTT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTLGHYF*NSYLPP
Trigger: AGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAG...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTTTAGGCAGAGCCACTaGTGGGCTTGCTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPFRQSH*WACFIL
Trigger: AAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCTAAA...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTATCAGGCATCTTTCCTTaGCCATCTTTTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLSGIFP*PSFALA
Trigger: GGCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGA...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCAGGCAGAGCCACTGCTaGGCTTGCTTTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPRQSHC*ACFILF
Trigger: AAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCT...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGTTTCGAAGCGAGGGTaGGCTCCTTATAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAVSKRG*APYSSR
Trigger: GCGTGAACTATAAGGAGCCCACCCTCGCTTCGAAAC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp AGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATCGACTTCCCTGCCAAATaGCTGGTTTCAAAATCATCC +
Preference number: 4 (lower is better)
Translates to: RFYYVCRLSETDCQHPSIDFPAK*LVSKSS
Trigger: GGATGATTTTGAAACCAGTCATTTGGCAGGGAAGTC...GATGGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR TCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCGTAAACGTTCCTGGCTaGATCAGCTTTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSVNVPG*ISFGDK
Trigger: CTTATCACCAAAGCTGATTCAGCCAGGAACGTTTAC...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGGTGACTGGTCTATCTaGATTGCTCGTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAGDWSI*IARGIL
Trigger: CAGAATCCCACGAGCAATTCAGATAGACCAGTCACC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR TCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTCAGGCTAAGATGAGGTaGCTGCTGAGTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTQAKMR*LLSFRW
Trigger: CCACCTGAAACTCAGCAGTCACCTCATCTTAGCCTG...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGCAGGCTAAGATGAGGTaGCTGCTGAGTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWQAKMR*LLSFRW
Trigger: CCACCTGAAACTCAGCAGTCACCTCATCTTAGCCTG...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGCTTCTTTGGCAGGTaGTACCTCCAGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNACFFGR*YLQGSF
Trigger: AAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGCA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGGCCATCTTTTGCCTTaGCCACTACTTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAGHLLP*PLLLQQ
Trigger: CTGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGGGCCATCTTTTGCCTTaGCCACTACTTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRGHLLP*PLLLQQ
Trigger: CTGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCC...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAAGCTGTCATCACTATTaGGGTCCATTCCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLSCHHY*GPFQRN
Trigger: GTTCCTCTGGAATGGACCCCAATAGTGATGACAGCT...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTAGCTGTCATCACTATTaGGGTCCATTCCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSSCHHY*GPFQRN
Trigger: GTTCCTCTGGAATGGACCCCAATAGTGATGACAGCT...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACTGCTGAGTTTCAGGTaGTGTAGTGGTAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTLLSFR*CSGRSF
Trigger: AAAACTCCTACCACTACACCACCTGAAACTCAGCAG...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACAAGGCAGAGCCACTGCTaGGCTTGCTTTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTRQSHC*ACFILF
Trigger: AAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCT...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGTTTCGAAGCGAGGGTaGGCTCCTTATAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTVSKRG*APYSSR
Trigger: GCGTGAACTATAAGGAGCCCACCCTCGCTTCGAAAC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGTTTCGAAGCGAGGGTaGGCTCCTTATAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWVSKRG*APYSSR
Trigger: GCGTGAACTATAAGGAGCCCACCCTCGCTTCGAAAC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACATTCTCAGCTGTAGGATaGTATCTTGGGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTFSAVG*YLGLLS
Trigger: TGAAAGAAGCCCAAGATATCATCCTACAGCTGAGAA...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTGACTTCCCTGCCAAATaGCTGGTTTCAAAATCATCC +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSDFPAK*LVSKSS
Trigger: GGATGATTTTGAAACCAGTCATTTGGCAGGGAAGTC...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR TCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTTGGTCCTTGCTCCATTaGCAAGCATTGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSWSLLH*QALCCT
Trigger: TGTACAACACAATGCTTGTCAATGGAGCAAGGACCA...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR TCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTGTAAACGTTCCTGGCTaGATCAGCTTTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSVNVPG*ISFGDK
Trigger: CTTATCACCAAAGCTGATTCAGCCAGGAACGTTTAC...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTTGCTCGTGGGATTCTaGATGTACTTGCAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWLLVGF*MYLQVG
Trigger: GCCCACTTGCAAGTACATTCAGAATCCCACGAGCAA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR TCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTGCTTCTTTGGCAGGTaGTACCTCCAGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTCFFGR*YLQGSF
Trigger: AAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGCA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTGCTTCTTTGGCAGGTaGTACCTCCAGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWCFFGR*YLQGSF
Trigger: AAAAGAGCCCTGGAGGTATCACCTGCCAAAGAAGCA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCAAGGCAATCTCCAAGTaGCACAACCAAAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSKAISK*HNQKET
Trigger: AGTTTCCTTTTGGTTGTGTCACTTGGAGATTGCCTT...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACAAAAAACTTTGACCCCTaGAAACACCTGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTKNFDP*KHLEML
Trigger: CAGCATTTCCAGGTGTTTTCAGGGGTCAAAGTTTTT...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCAAAAACTTTGACCCCTaGAAACACCTGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSKNFDP*KHLEML
Trigger: CAGCATTTCCAGGTGTTTTCAGGGGTCAAAGTTTTT...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTACCTCCAGGGCTCCTaGATCAAAATCAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTYLQGS*IKINSQ
Trigger: CTGGGAGTTGATTTTGATTCAGGAGCCCTGGAGGTA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443724.5
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCACTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNALGHYF*NSYLPP
Trigger: AGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAG...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCGATTATTTGGCATGGTaGAGCTATAAAAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSDYLAW*SYKRPA
Trigger: CGCAGGTCTTTTATAGCTGCACCATGCCAAATAATC...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCGATTCTGAATGTACTTaGAAGTGGGCAAATAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPDSECT*KWANRG
Trigger: ACCTCTATTTGCCCACTTGCAAGTACATTCAGAATC...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACATCCCTGCCAAATGACTaGTTTCAAAATCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTSLPND*FQNHPS
Trigger: GCTTGGATGATTTTGAAACCAGTCATTTGGCAGGGA...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTATCTGAATTGCTCGTaGGATTCTGAATGTACTTGC +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPYLNCS*DSECTC
Trigger: GCAAGTACATTCAGAATCCCACGAGCAATTCAGATA...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATCTAGGAGATGGGATTaGAGAATTTCGCTTACACAA +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSRRWD*RISLTQ
Trigger: TTGTGTAAGCGAAATTCTCCAATCCCATCTCCTAGA...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAAAATCATCTAGGAGATaGGATTGGAGAATTTCGCTT +
Preference number: 4 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPKSSRR*DWRISL
Trigger: AAGCGAAATTCTCCAATCCCATCTCCTAGATGATTT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTATTCTCAGCTGTAGGATaGTATCTTGGGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLFSAVG*YLGLLS
Trigger: TGAAAGAAGCCCAAGATATCATCCTACAGCTGAGAA...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTCCTTGCTCCATTaGCAAGCATTGTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAWSLLH*QALCCT
Trigger: TGTACAACACAATGCTTGTCAATGGAGCAAGGACCA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGTAAACGTTCCTGGCTaGATCAGCTTTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAVNVPG*ISFGDK
Trigger: CTTATCACCAAAGCTGATTCAGCCAGGAACGTTTAC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR TCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTACGGAAAGGAGTAAGATaGACACCCTCTTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLRKGVR*TPSSKL
Trigger: TAATTTGGAAGAGGGTGTTCATCTTACTCCTTTCCG...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAAGTTTTCTAAGGATGTaGAGCCCGTGGACTTTACCT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNASFLRM*SPWTLP
Trigger: AGGTAAAGTCCACGGGCTTCACATCCTTAGAAAACT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATTATGTATGTAGGCTaGGTGAAACAGACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSIMYVG*VKQTVN
Trigger: GTTGACAGTCTGTTTCACTCAGCCTACATACATAAT...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp AGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATCATTATGTATGTAGGCTaGGTGAAACAGACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: RFYYVCRLSETDCQHPSIIMYVG*VKQTVN
Trigger: GTTGACAGTCTGTTTCACTCAGCCTACATACATAAT...GATGGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATTCAGGTGGTGTAGCTaGATCAAAATCAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAFRWCS*IKINSQ
Trigger: CTGGGAGTTGATTTTGATTCAGCTACACCACCTGAA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419233.6
ENST00000425061.5
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTCTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTLGHYF*NSYLPP
Trigger: AGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAG...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTGATTATTTGGCATGGTaGAGCTATAAAAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSDYLAW*SYKRPA
Trigger: CGCAGGTCTTTTATAGCTGCACCATGCCAAATAATC...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR GCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTACTGGTCTATCTGAATTaGTCGTGGGATTCTGAATGT +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLLVYLN*SWDSEC
Trigger: ACATTCAGAATCCCACGAGCAATTCAGATAGACCAG...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATTTAGGCAGAGCCACTaGTGGGCTTGCTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAFRQSH*WACFIL
Trigger: AAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCTAAA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCGGTGATTATTTGGCATaGTGCAGCTATAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSGDYLA*CSYKRP
Trigger: AGGTCTTTTATAGCTGCACCATGCCAAATAATCACC...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGAGCTGTCATCACTATTaGGGTCCATTCCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSCHHY*GPFQRN
Trigger: GTTCCTCTGGAATGGACCCCAATAGTGATGACAGCT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTAGCTGTCATCACTATTaGGGTCCATTCCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSCHHY*GPFQRN
Trigger: GTTCCTCTGGAATGGACCCCAATAGTGATGACAGCT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTTCCCTGCCAAATGACTaGTTTCAAAATCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSSLPND*FQNHPS
Trigger: GCTTGGATGATTTTGAAACCAGTCATTTGGCAGGGA...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGAATGTACTTGCAAGTaGGCAAATAGAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAECTCK*ANRGHR
Trigger: CCGATGACCTCTATTTGCCCACTTGCAAGTACATTC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGGTAGGAGTTTTTGTTaGCTTAGAACCCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWGRSFC*LRTLRL
Trigger: GAGACGGAGGGTTCTAAGCCAACAAAAACTCCTACC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCACTGCTGAGTTTCAGGTaGTGTAGTGGTAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNALLSFR*CSGRSF
Trigger: AAAACTCCTACCACTACACCACCTGAAACTCAGCAG...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAAGGCAGAGCCACTGCTaGGCTTGCTTTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNARQSHC*ACFILF
Trigger: AAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTCCAGAACGATACCTTaGCCACTACTTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSRTIP*PLLLQQ
Trigger: CTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCCAGAACGATACCTTaGCCACTACTTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSRTIP*PLLLQQ
Trigger: CTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATTCTCAGCTGTAGGATaGTATCTTGGGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAFSAVG*YLGLLS
Trigger: TGAAAGAAGCCCAAGATATCATCCTACAGCTGAGAA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGACTTCCCTGCCAAATaGCTGGTTTCAAAATCATCC +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWDFPAK*LVSKSS
Trigger: GGATGATTTTGAAACCAGTCATTTGGCAGGGAAGTC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGAGTTTTCTAAGGATGTaGAGCCCGTGGACTTTACCT +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSFLRM*SPWTLP
Trigger: AGGTAAAGTCCACGGGCTTCACATCCTTAGAAAACT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTAGTTTTCTAAGGATGTaGAGCCCGTGGACTTTACCT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSFLRM*SPWTLP
Trigger: AGGTAAAGTCCACGGGCTTCACATCCTTAGAAAACT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAATTATGTATGTAGGCTaGGTGAAACAGACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLIMYVG*VKQTVN
Trigger: GTTGACAGTCTGTTTCACTCAGCCTACATACATAAT...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGATTATTTGGCATGGTaGAGCTATAAAAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNADYLAW*SYKRPA
Trigger: CGCAGGTCTTTTATAGCTGCACCATGCCAAATAATC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGGATTATTTGGCATGGTaGAGCTATAAAAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRDYLAW*SYKRPA
Trigger: CGCAGGTCTTTTATAGCTGCACCATGCCAAATAATC...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATCTTCAAGAGGAATTTaGGGTAAATCCTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSSRGI*GKSFTN
Trigger: ATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGA...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGGTGATTATTTGGCATaGTGCAGCTATAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLGDYLA*CSYKRP
Trigger: AGGTCTTTTATAGCTGCACCATGCCAAATAATCACC...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTGGTGATTATTTGGCATaGTGCAGCTATAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSGDYLA*CSYKRP
Trigger: AGGTCTTTTATAGCTGCACCATGCCAAATAATCACC...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CCA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCGTGTTGGTGATTATTTaGCATGGTGCAGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSVLVII*HGAAIK
Trigger: TTTTATAGCTGCACCATGCCAAATAATCACCAACAC...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCACAAATAAATTTCTaGAGCTGTCATCACTATTGG +
Preference number: 4 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPSQINF*SCHHYW
Trigger: CCAATAGTGATGACAGCTCCAGAAATTTATTTGTGA...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGAGGCAGAGCCACTGCTaGGCTTGCTTTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWRQSHC*ACFILF
Trigger: AAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTAGGCAGAGCCACTGCTaGGCTTGCTTTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTRQSHC*ACFILF
Trigger: AAAAAGAATAAAGCAAGCCCAGCAGTGGCTCTGCCT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CCA 90 bp AGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATCAAATCATCTAGGAGATaGGATTGGAGAATTTCGCTT +
Preference number: 4 (lower is better)
Translates to: RFYYVCRLSETDCQHPSIKSSRR*DWRISL
Trigger: AAGCGAAATTCTCCAATCCCATCTCCTAGATGATTT...GATGGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
3UTR CAA 72 bp TCAACACGTACTGATTCCTCGGTCACCCTGGGAAAGTaGCTATCTCTAATTAAAGGGCTTAGATTTTATTAT +
Preference number: 4 (lower is better)
Translates to: STRTDSSVTLGK*LSLIKGLRFYY
Trigger: ATAATAAAATCTAAGCCCTTTAATTAGAGATAGCAACTTTCCCAGGGTGACCGAGGAATCAGTACGTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTTCTCAGCTGTAGGATaGTATCTTGGGCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWFSAVG*YLGLLS
Trigger: TGAAAGAAGCCCAAGATATCATCCTACAGCTGAGAA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR TCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTCGGAAAGGAGTAAGATaGACACCCTCTTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTRKGVR*TPSSKL
Trigger: TAATTTGGAAGAGGGTGTTCATCTTACTCCTTTCCG...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR TCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTAAGGCAATCTCCAAGTaGCACAACCAAAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTKAISK*HNQKET
Trigger: AGTTTCCTTTTGGTTGTGTCACTTGGAGATTGCCTT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR TCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGAAAAACTTTGACCCCTaGAAACACCTGGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWKNFDP*KHLEML
Trigger: CAGCATTTCCAGGTGTTTTCAGGGGTCAAAGTTTTT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGATTATTTGGCATGGTaGAGCTATAAAAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWDYLAW*SYKRPA
Trigger: CGCAGGTCTTTTATAGCTGCACCATGCCAAATAATC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGATTATTTGGCATGGTaGAGCTATAAAAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTDYLAW*SYKRPA
Trigger: CGCAGGTCTTTTATAGCTGCACCATGCCAAATAATC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTACATTTTCAGGTATGTaGATGTTTACTAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSTFSGM*MFTSGS
Trigger: AGACCCACTAGTAAACATGCACATACCTGAAAATGT...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTCTGGTCTATCTGAATTaGTCGTGGGATTCTGAATGT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTLVYLN*SWDSEC
Trigger: ACATTCAGAATCCCACGAGCAATTCAGATAGACCAG...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATCCTTGGCCATCTTTTaGCTTAAAACCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNASLAIF*LKTYFF
Trigger: GAAGAAGTAGGTTTTAAGGCAAAAGATGGCCAAGGA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGGTGATTATTTGGCATaGTGCAGCTATAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAGDYLA*CSYKRP
Trigger: AGGTCTTTTATAGCTGCACCATGCCAAATAATCACC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTGTGTTGGTGATTATTTaGCATGGTGCAGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSVLVII*HGAAIK
Trigger: TTTTATAGCTGCACCATGCCAAATAATCACCAACAC...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CCA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACATCACAAATAAATTTCTaGAGCTGTCATCACTATTGG +
Preference number: 4 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTSQINF*SCHHYW
Trigger: CCAATAGTGATGACAGCTCCAGAAATTTATTTGTGA...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCCCTGCCAAATGACTaGTTTCAAAATCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSLPND*FQNHPS
Trigger: GCTTGGATGATTTTGAAACCAGTCATTTGGCAGGGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CCA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGTCTAGGAGATGGGATTaGAGAATTTCGCTTACACAA +
Preference number: 4 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRSRRWD*RISLTQ
Trigger: TTGTGTAAGCGAAATTCTCCAATCCCATCTCCTAGA...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR GCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTTCTTCAAGAGGAATTTaGGGTAAATCCTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSSSRGI*GKSFTN
Trigger: ATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGA...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR GCA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGACATTTTCAGGTATGTaGATGTTTACTAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRTFSGM*MFTSGS
Trigger: AGACCCACTAGTAAACATGCACATACCTGAAAATGT...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAACATTTTCAGGTATGTaGATGTTTACTAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNATFSGM*MFTSGS
Trigger: AGACCCACTAGTAAACATGCACATACCTGAAAATGT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGATTCTGAATGTACTTaGAAGTGGGCAAATAGAGGT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTDSECT*KWANRG
Trigger: ACCTCTATTTGCCCACTTGCAAGTACATTCAGAATC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCCTTGGCCATCTTTTaGCTTAAAACCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSLAIF*LKTYFF
Trigger: GAAGAAGTAGGTTTTAAGGCAAAAGATGGCCAAGGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGGTGATTATTTGGCATaGTGCAGCTATAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTGDYLA*CSYKRP
Trigger: AGGTCTTTTATAGCTGCACCATGCCAAATAATCACC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGGTGATTATTTGGCATaGTGCAGCTATAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWGDYLA*CSYKRP
Trigger: AGGTCTTTTATAGCTGCACCATGCCAAATAATCACC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGTGTTGGTGATTATTTaGCATGGTGCAGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAVLVII*HGAAIK
Trigger: TTTTATAGCTGCACCATGCCAAATAATCACCAACAC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTATCACAAATAAATTTCTaGAGCTGTCATCACTATTGG +
Preference number: 4 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLSQINF*SCHHYW
Trigger: CCAATAGTGATGACAGCTCCAGAAATTTATTTGTGA...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTTCACAAATAAATTTCTaGAGCTGTCATCACTATTGG +
Preference number: 4 (lower is better)
Translates to: TLSVDLASPESKSTPSVSSQINF*SCHHYW
Trigger: CCAATAGTGATGACAGCTCCAGAAATTTATTTGTGA...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTATCTGAATTGCTCGTaGGATTCTGAATGTACTTGC +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTYLNCS*DSECTC
Trigger: GCAAGTACATTCAGAATCCCACGAGCAATTCAGATA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCTAGGAGATGGGATTaGAGAATTTCGCTTACACAA +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSRRWD*RISLTQ
Trigger: TTGTGTAAGCGAAATTCTCCAATCCCATCTCCTAGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAAAATCATCTAGGAGATaGGATTGGAGAATTTCGCTT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAKSSRR*DWRISL
Trigger: AAGCGAAATTCTCCAATCCCATCTCCTAGATGATTT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGCTGCTGAGTTTCAGGTaGTGTAGCTTCTATTTGAAA +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWLLSFR*CSFYLK
Trigger: TTTCAAATAGAAGCTACACCACCTGAAACTCAGCAG...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306698.6
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTCTGCTGAGTTTCAGGTaGTGTAGCTTCTATTTGAAA +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTLLSFR*CSFYLK
Trigger: TTTCAAATAGAAGCTACACCACCTGAAACTCAGCAG...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306698.6
ENST00000452020.5
CDS-3UTR GCA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATCTTCAAGAGGAATTTaGGGTAAATCCTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: PQHIKLESIKGLHTLVNASSRGI*GKSFTN
Trigger: ATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGTGTTGGTGATTATTTaGCATGGTGCAGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWVLVII*HGAAIK
Trigger: TTTTATAGCTGCACCATGCCAAATAATCACCAACAC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGTGTTGGTGATTATTTaGCATGGTGCAGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTVLVII*HGAAIK
Trigger: TTTTATAGCTGCACCATGCCAAATAATCACCAACAC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTCTTCAAGAGGAATTTaGGGTAAATCCTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSSRGI*GKSFTN
Trigger: ATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR GCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCTTCAAGAGGAATTTaGGGTAAATCCTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSSRGI*GKSFTN
Trigger: ATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCACAAATAAATTTCTaGAGCTGTCATCACTATTGG +
Preference number: 4 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSQINF*SCHHYW
Trigger: CCAATAGTGATGACAGCTCCAGAAATTTATTTGTGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CCA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTCACAAATAAATTTCTaGAGCTGTCATCACTATTGG +
Preference number: 4 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSQINF*SCHHYW
Trigger: CCAATAGTGATGACAGCTCCAGAAATTTATTTGTGA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS CCA 90 bp TTCAAGGCTCTTCGAAGCTCTCCAGCCACGGCTAGCCCCGCGCACTaGGCCCTCCAGGACCGTACCACCGTCCGCCGTCGCCTGGAACTA +
Preference number: 5 (lower is better)
Translates to: FKALRSSPATASPAH*ALQDRTTVRRRLEL
Trigger: TAGTTCCAGGCGACGGCGGACGGTGGTACGGTCCTGGAGGGCCCAGTGCGCGGGGCTAGCCGTGGCTGGAGAGCTTCGAAGAGCCTTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412997.6
ENST00000442720.5
CDS CCA 90 bp GGACGCGGCGACCCTCCTGCCGCAGGCGCGTCCAGAACGATACCTTaGCCACTACTTCTGCAACAGCTATCTTCCTCCTCCTCACATTTC +
Preference number: 5 (lower is better)
Translates to: GRGDPPAAGASRTIP*PLLLQQLSSSSSHF
Trigger: GAAATGTGAGGAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGACGCGCCTGCGGCAGGAGGGTCGCCGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412997.6
ENST00000417364.1
ENST00000421451.5
ENST00000425061.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
CDS GCA 90 bp CTCCTGCCGCAGGCGCGTCCAGAACGATACCTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCTCCTCACATTTCAAGGCTCTTCGAA +
Preference number: 5 (lower is better)
Translates to: LLPQARPERYLGHYF*NSYLPPPHISRLFE
Trigger: TTCGAAGAGCCTTGAAATGTGAGGAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGACGCGCCTGCGGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412997.6
ENST00000417364.1
ENST00000421451.5
ENST00000425061.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCATTCAGGCATCTTTCCTaGGCCATCTTTTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPFRHLS*AIFCLG
Trigger: GCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGAA...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCTGGCCATCTTTTGCCTaGGCCACTACTTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSWPSFA*ATTSAT
Trigger: TGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCCA...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACATTCCTTGGCCATCTTTaGCCTTGGCCACTACTTCTG +
Preference number: 5 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTFLGHL*PWPLLL
Trigger: CAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGAA...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp AGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATCTTCCTTGGCCATCTTTaGCCTTGGCCACTACTTCTG +
Preference number: 5 (lower is better)
Translates to: RFYYVCRLSETDCQHPSIFLGHL*PWPLLL
Trigger: CAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGAA...GATGGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACAGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: TLSVDLASPESKSTPSVSELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CAA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTTGGTCCTTGCTCCATaGACAAGCATTGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPLVLAP*TSIVLY
Trigger: GTACAACACAATGCTTGTCAATGGAGCAAGGACCAA...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263753.8
CDS-3UTR CAA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAGGATACAAGGAGACATaGGTGATATCCTTCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTGYKET*VISFRL
Trigger: TAGCCTGAAGGATATCACCAATGTCTCCTTGTATCC...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAATAAAAATTGCTTCTTaGGCAGGTGATACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPIKIAS*AGDTSR
Trigger: CCTGGAGGTATCACCTGCCAAAGAAGCAATTTTTAT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCGTCACCCTGGGAAAGTaGCTATCTCTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPVTLGK*LSLIKG
Trigger: CCCTTTAATTAGAGATAGCAACTTTCCCAGGGTGAC...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGTGGCCATCTTTTGCCTaGGCCACTACTTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRWPSFA*ATTSAT
Trigger: TGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCCA...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGTTCCTTGGCCATCTTTaGCCTTGGCCACTACTTCTG +
Preference number: 5 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRFLGHL*PWPLLL
Trigger: CAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGAA...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATTCAGGCATCTTTCCTaGGCCATCTTTTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAFRHLS*AIFCLG
Trigger: GCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGAA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAATAAAAGACCTGCGTTaGCCAATCTCTGCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTIKDLR*PISAKF
Trigger: AAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTAT...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp AGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACACAACCAAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: RTQLSLQERKGNLQVTQPSVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...TGGTTGTGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp GGGCTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCAGCAGTGTAGAAGTGTaGGTGATTATTTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: GLRFYYVCRLSETDCQHPSSVEV*VIIWHG
Trigger: ACCATGCCAAATAATCACCAACACTTCTACACTGCT...GGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAAGCAGTGTAGAAGTGTaGGTGATTATTTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSSVEV*VIIWHG
Trigger: ACCATGCCAAATAATCACCAACACTTCTACACTGCT...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp TGGGTAAAATGCAATATATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: WVKCNIFEDTAELTRKKRELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...CCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATATATTGCATTTTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTTCAGGCATCTTTCCTaGGCCATCTTTTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWFRHLS*AIFCLG
Trigger: GCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGAA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCATAAAAGACCTGCGTTaGCCAATCTCTGCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSIKDLR*PISAKF
Trigger: AAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTAT...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCTCCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACAAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: PPSLPQHIKLESIKGLHTSVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...TGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp TATTTGAGGACACAGCTGAGCTTACAAGAAAGAAAAGGCAATCTCCAAGTGACAAGCAGTGTAGAAGTGTaGGTGATTATTTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: YLRTQLSLQERKGNLQVTSSVEV*VIIWHG
Trigger: ACCATGCCAAATAATCACCAACACTTCTACACTGCT...TGTCACTTGGAGATTGCCTTTTCTTTCTTGTAAGCTCAGCTGTGTCCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGAGCTGTCATCACTATaGGGGTCCATTCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTELSSL*GSIPEE
Trigger: TTCCTCTGGAATGGACCCCAATAGTGATGACAGCTC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTTTGGTCCTTGCTCCATaGACAAGCATTGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: TLSVDLASPESKSTPSVSLVLAP*TSIVLY
Trigger: GTACAACACAATGCTTGTCAATGGAGCAAGGACCAA...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CAA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTCACCCTGGGAAAGTaGCTATCTCTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLVTLGK*LSLIKG
Trigger: CCCTTTAATTAGAGATAGCAACTTTCCCAGGGTGAC...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGTCCAGAACGATACCTaGGCCACTACTTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWVQNDT*ATTSAT
Trigger: TGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGAC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGTCCAGAACGATACCTaGGCCACTACTTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTVQNDT*ATTSAT
Trigger: TGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGAC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CCATCTCTCCCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAATAAAAGACCTGCGTTaGCCAATCTCTGCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: PSLPQHIKLESIKGLHTLIKDLR*PISAKF
Trigger: AAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTAT...TAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGGGAGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTATAAAAGACCTGCGTTaGCCAATCTCTGCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: TLSVDLASPESKSTPSVSIKDLR*PISAKF
Trigger: AAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTAT...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CAA 90 bp CTTAGATTTTATTATGTATGTAGGCTGAGTGAAACAGACTGTCAACACCCCTCCAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: LRFYYVCRLSETDCQHPSSVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...GGAGGGGTGTTGACAGTCTGTTTCACTCAGCCTACATACATAATAAAATCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTAGCAGTGTAGAAGTGTaGGTGATTATTTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: TLSVDLASPESKSTPSVSSSVEV*VIIWHG
Trigger: ACCATGCCAAATAATCACCAACACTTCTACACTGCT...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATTGGTCCTTGCTCCATaGACAAGCATTGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNALVLAP*TSIVLY
Trigger: GTACAACACAATGCTTGTCAATGGAGCAAGGACCAA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAGGATACAAGGAGACATaGGTGATATCCTTCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAGYKET*VISFRL
Trigger: TAGCCTGAAGGATATCACCAATGTCTCCTTGTATCC...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAATAAAAGACCTGCGTTaGCCAATCTCTGCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAIKDLR*PISAKF
Trigger: AAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTAT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: TLSVDLASPESKSTPSVSSVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGGATACAAGGAGACATaGGTGATATCCTTCAGGCTA +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTGYKET*VISFRL
Trigger: TAGCCTGAAGGATATCACCAATGTCTCCTTGTATCC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGGTCACCCTGGGAAAGTaGCTATCTCTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWVTLGK*LSLIKG
Trigger: CCCTTTAATTAGAGATAGCAACTTTCCCAGGGTGAC...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATTCAGGCATCTTTCCTaGGCCATCTTTTGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNAFRHLS*AIFCLK
Trigger: TTTAAGGCAAAAGATGGCCAAGGAAAGATGCCTGAA...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS CCA 90 bp TTTCTTCAAGAGGAATTTGCGGTAAATCCTTCACAAATAAATTTCTaGAGCTGTCATCACTATTGGGGTCCATTCCAGAGGAACATATTT +
Preference number: 5 (lower is better)
Translates to: FLQEEFAVNPSQINF*SCHHYWGPFQRNIF
Trigger: AAATATGTTCCTCTGGAATGGACCCCAATAGTGATGACAGCTCCAGAAATTTATTTGTGAAGGATTTACCGCAAATTCCTCTTGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000412997.6
ENST00000417364.1
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000437051.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
ENST00000456624.1
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGATAAAAGACCTGCGTTaGCCAATCTCTGCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWIKDLR*PISAKF
Trigger: AAACTTGGCAGAGATTGGCAAACGCAGGTCTTTTAT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCAAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNASVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTAGCAGTGTAGAAGTGTaGGTGATTATTTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSSVEV*VIIWHG
Trigger: ACCATGCCAAATAATCACCAACACTTCTACACTGCT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGAGCAGTGTAGAAGTGTaGGTGATTATTTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSSVEV*VIIWHG
Trigger: ACCATGCCAAATAATCACCAACACTTCTACACTGCT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp ACATTATCAGTAGACTTAGCTTCACCTGAATCAAAATCAACTCCCAGTGTGTCTTTGACAAGCATTGTGTaGTACATTTTCAGGTATGTG +
Preference number: 5 (lower is better)
Translates to: TLSVDLASPESKSTPSVSLTSIV*YIFRYV
Trigger: CACATACCTGAAAATGTACAACACAATGCTTGTCAA...AGACACACTGGGAGTTGATTTTGATTCAGGTGAAGCTAAGTCTACTGATAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456624.1
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTGTCATTGCTCACTTTTaGTCGGAAAGGAGTAAGATG +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTVIAHF*SERSKM
Trigger: CATCTTACTCCTTTCCGACAAAAAGTGAGCAATGAC...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CAA 90 bp CCCCAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCACTCACTTCAGACTCGTaGTTTTCTTCTCTATTAGAG +
Preference number: 5 (lower is better)
Translates to: PQHIKLESIKGLHTLVNALTSDS*FSSLLE
Trigger: CTCTAATAGAGAAGAAAACAACGAGTCTGAAGTGAG...TGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGATAAAAATTGCTTCTTaGGCAGGTGATACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWIKIAS*AGDTSR
Trigger: CCTGGAGGTATCACCTGCCAAAGAAGCAATTTTTAT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTATAAAAATTGCTTCTTaGGCAGGTGATACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTIKIAS*AGDTSR
Trigger: CCTGGAGGTATCACCTGCCAAAGAAGCAATTTTTAT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTTCAGGCATCTTTCCTaGGCCATCTTTTGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWFRHLS*AIFCLK
Trigger: TTTAAGGCAAAAGATGGCCAAGGAAAGATGCCTGAA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGAGTGTTGGTGATTATTaGGCATGGTGCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSVGDY*AWCSYK
Trigger: TTTATAGCTGCACCATGCCAAATAATCACCAACACT...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTTGACAAGCATTGTGTaGTACATTTTCAGGTATGTG +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWLTSIV*YIFRYV
Trigger: CACATACCTGAAAATGTACAACACAATGCTTGTCAA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTTGACAAGCATTGTGTaGTACATTTTCAGGTATGTG +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTLTSIV*YIFRYV
Trigger: CACATACCTGAAAATGTACAACACAATGCTTGTCAA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CAA 90 bp CACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGACTTCTCTATTAGAGTCATaGCTCACTTTTTGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: HIKLESIKGLHTLVNAWTSLLES*LTFCRK
Trigger: TTTCCGACAAAAAGTGAGCAATGACTCTAATAGAGA...AGTCCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS-3UTR CAA 90 bp CAACACATAAAGCTAGAATCTATTAAAGGTCTGCATACATTAGTGAATGCATGGTCTCTATTAGAGTCATaGCTCACTTTTTGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: QHIKLESIKGLHTLVNAWSLLES*LTFCRK
Trigger: TTTCCGACAAAAAGTGAGCAATGACTCTAATAGAGA...CCATGCATTCACTAATGTATGCAGACCTTTAATAGATTCTAGCTTTATGTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263753.8
ENST00000421451.5
CDS CCA 72 bp CTTCGAAGCTCTCCAGCCACGGCTAGCCCCGCGCACTaGGCCCTCCAGGACCGTACCACCGTCCGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: LRSSPATASPAH*ALQDRTTVRRR
Trigger: GCGACGGCGGACGGTGGTACGGTCCTGGAGGGCCCAGTGCGCGGGGCTAGCCGTGGCTGGAGAGCTTCGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000412997.6
ENST00000419233.6
ENST00000437051.5
ENST00000442720.5
CDS CCA 72 bp GACCCTCCTGCCGCAGGCGCGTCCAGAACGATACCTTaGCCACTACTTCTGCAACAGCTATCTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DPPAAGASRTIP*PLLLQQLSSSS
Trigger: GGAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGACGCGCCTGCGGCAGGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412997.6
ENST00000417364.1
ENST00000421451.5
ENST00000425061.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
CDS CAA 72 bp CGACCCTCCTGCCGCAGGCGCGTCCAGAACGATACCTaGGCCACTACTTCTGCAACAGCTATCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RPSCRRRVQNDT*ATTSATAIFLL
Trigger: GAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGACGCGCCTGCGGCAGGAGGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412997.6
ENST00000417364.1
ENST00000421451.5
ENST00000425061.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
CDS CAA 90 bp TGGACGCGGCGACCCTCCTGCCGCAGGCGCGTCCAGAACGATACCTaGGCCACTACTTCTGCAACAGCTATCTTCCTCCTCCTCACATTT +
Preference number: 6 (lower is better)
Translates to: WTRRPSCRRRVQNDT*ATTSATAIFLLLTF
Trigger: AAATGTGAGGAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGACGCGCCTGCGGCAGGAGGGTCGCCGCGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412997.6
ENST00000417364.1
ENST00000421451.5
ENST00000425061.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
CDS GCA 72 bp CAGGCGCGTCCAGAACGATACCTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCTCCTCACATTTCAAGG +
Preference number: 6 (lower is better)
Translates to: QARPERYLGHYF*NSYLPPPHISR
Trigger: CCTTGAAATGTGAGGAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGTATCGTTCTGGACGCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000412997.6
ENST00000417364.1
ENST00000421451.5
ENST00000425061.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
CDS GCA 72 bp CTTTCCTTGGCCATCTTTTGCCTTGGCCACTACTTCTaGAACAGCTATCTTCCTCCTCCTCACATTTCAAGG +
Preference number: 6 (lower is better)
Translates to: LSLAIFCLGHYF*NSYLPPPHISR
Trigger: CCTTGAAATGTGAGGAGGAGGAAGATAGCTGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000437051.5
CDS CCA 72 bp CTGAATTGCTCGTGGGATTCTGAATGTACTTGCAAGTaGGCAAATAGAGGTCATCGGAATCATCTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: LNCSWDSECTCK*ANRGHRNHLLN
Trigger: GTTCAGGAGATGATTCCGATGACCTCTATTTGCCCACTTGCAAGTACATTCAGAATCCCACGAGCAATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263753.8
ENST00000412997.6
ENST00000421451.5
CDS CCA 72 bp GGATGTGAAGCCCGTGGACTTTACCTCAAGCAGATGTaGGTTTCAAGTTTACATTTCCTACAGTCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: GCEARGLYLKQM*VSSLHFLQSGN
Trigger: ATTCCCAGACTGTAGGAAATGTAAACTTGAAACCCACATCTGCTTGAGGTAAAGTCCACGGGCTTCACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000443724.5
ENST00000452020.5
CDS CCA 72 bp GACTATCTTGAAAGGACTTTTTCAGGCATCTTTCCTTaGCCATCTTTTGCCTTGGCCACTACTTCTGCAACA +
Preference number: 6 (lower is better)
Translates to: DYLERTFSGIFP*PSFALATTSAT
Trigger: TGTTGCAGAAGTAGTGGCCAAGGCAAAAGATGGCCAAGGAAAGATGCCTGAAAAAGTCCTTTCAAGATAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000419233.6
ENST00000437051.5
CDS CCA 72 bp GAGGAATTTGCGGTAAATCCTTCACAAATAAATTTCTaGAGCTGTCATCACTATTGGGGTCCATTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: EEFAVNPSQINF*SCHHYWGPFQR
Trigger: CCTCTGGAATGGACCCCAATAGTGATGACAGCTCCAGAAATTTATTTGTGAAGGATTTACCGCAAATTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000263753.8
ENST00000306698.6
ENST00000412997.6
ENST00000417364.1
ENST00000419233.6
ENST00000421451.5
ENST00000425061.5
ENST00000437051.5
ENST00000442720.5
ENST00000443724.5
ENST00000452020.5
ENST00000456624.1