RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SGK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101049

Ensembl transcript IDs: ENST00000341458.9, ENST00000373077.5, ENST00000373100.7, ENST00000412111.6, ENST00000423407.7, ENST00000426287.2, ENST00000485914.2, ENST00000496343.6, ENST00000617268.1, ENST00000617358.1, ENST00000647716.1, ENST00000647834.1, ENST00000648083.1, ENST00000648530.1

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGCCCAGAAAGGCTaGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAA +
Preference number: 1 (lower is better)
Translates to: IHGGCQRCRRRAQKG*ALGPRRRRLQPHPK
Trigger: TTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCTGGGCTCTCCTTCTGCATCTCTGGCAACCTCCATGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
3UTR CCA 90 bp ACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTaGAGCAAGAAGGGCTTGGTCCTGGCTCTGAGCCACAGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: TRISSGFSVHTTPSC*SKKGLVLALSHRQA
Trigger: GGCCTGCCTGTGGCTCAGAGCCAGGACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
3UTR CCA 90 bp GCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTaGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTC +
Preference number: 1 (lower is better)
Translates to: ATVSGVQPMDLDTAS*VNSGSKCFKSAGPV
Trigger: GACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR CCA 90 bp GCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTGGGTaGTTAGTGAGATGGAAGCAGAAGTCATTGGGTGGAGCTTTTGGG +
Preference number: 1 (lower is better)
Translates to: ANKPHLPASIPGRGG*LVRWKQKSLGGAFG
Trigger: CCCAAAAGCTCCACCCAATGACTTCTGCTTCCATCTCACTAACCACCCACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR CCA 90 bp GCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTaGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTT +
Preference number: 1 (lower is better)
Translates to: ATVSGVQPMDLDTAS*VNSGSKCFKSAGPV
Trigger: AACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373077.5
3UTR TCA 90 bp CAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTaGACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTTGAAG +
Preference number: 1 (lower is better)
Translates to: QCQGYSQWTWTQLPG*TLGQNASSQQVLLK
Trigger: CTTCAACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373077.5
3UTR TCA 90 bp CAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTaGACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTCACAT +
Preference number: 1 (lower is better)
Translates to: QCQGYSQWTWTQLPG*TLGQNASSQQVLSH
Trigger: ATGTGACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR TCA 90 bp ATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTaGGTATCTGATGACCTGTCCTGCCAGTCCTGGACTCCGAAACAT +
Preference number: 1 (lower is better)
Translates to: IGSHLSRLAGQRYSL*VSDDLSCQSWTPKH
Trigger: ATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR GCA 90 bp CCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCTGTCACATTTGGGTTGAAGGGTGGA +
Preference number: 1 (lower is better)
Translates to: PMDLDTASWVNSGSK*FKSAGPVTFGLKGG
Trigger: TCCACCCTTCAACCCAAATGTGACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR CCA 90 bp AGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTCACATTTGGGTT +
Preference number: 1 (lower is better)
Translates to: RGTANGLGHSFLGEL*VKMLQVSRSCHIWV
Trigger: AACCCAAATGTGACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR GCA 90 bp CCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCTGTTGAAGACCTCACAAATGGTAGG +
Preference number: 1 (lower is better)
Translates to: PMDLDTASWVNSGSK*FKSAGPVEDLTNGR
Trigger: CCTACCATTTGTGAGGTCTTCAACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
3UTR TCA 90 bp CAGTGTGTATCTTTCAGCGTTCTTAGCACATGTGAAAGCTTAACATaGACTCTTCCTGACCCAGTTTTGATCTCTAATAGCTCAGTGTCA +
Preference number: 1 (lower is better)
Translates to: QCVSFSVLSTCESLT*TLPDPVLISNSSVS
Trigger: TGACACTGAGCTATTAGAGATCAAAACTGGGTCAGGAAGAGTTCATGTTAAGCTTTCACATGTGCTAAGAACGCTGAAAGATACACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR CCA 90 bp AGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGACAACCCCTAGCTGTTaGAGCAAGAAGGGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: RLGTWTSEEETPTPPKTKTTPSC*SKKGLV
Trigger: GACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGT...CTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
3UTR-3UTR CCA 90 bp CAGAAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAAACAACCCCTAGCTGTTaGAGCAAGAAGGGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: QKGWALGPRRRRLQPHPKTTPSC*SKKGLV
Trigger: GACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGT...TTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
3UTR-3UTR GCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCTTGAGGCCCCAGAGCTaGTGGCCACAGTGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVLRPQS*WPQCQG
Trigger: CCCCTGACACTGTGGCCAGCAGCTCTGGGGCCTCAA...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
3UTR-3UTR GCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCTTGAGGCCCCAGAGCTaGTGGCCACAGTGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLLRPQS*WPQCQG
Trigger: CCCCTGACACTGTGGCCAGCAGCTCTGGGGCCTCAA...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
3UTR-3UTR GCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCTCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 2 (lower is better)
Translates to: AICQGWQGRDTASEYLMTSDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR GCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 2 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLSDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR GCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPNSGSK*FKSAGP
Trigger: AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTT...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGGAAGCAGAAGTCATTaGGTGGAGCTTTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMGSRSH*VELLGK
Trigger: CTTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCC...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCCAGGGGTACAGCCAATaGACTTGGACACAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVQGYSQ*TWTQLP
Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTG...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
3UTR-3UTR GCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTTTAAAAGCGCCCTTTaGTCTTCTCCCCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLFKSAL*SSPLSS
Trigger: GGAGGAAAGGGGAGAAGAGCAAAGGGCGCTTTTAAA...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR GCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCACCTCTGGTAAAAGAGTaGTGGCTGCCTACCCAACAT +
Preference number: 2 (lower is better)
Translates to: LGIVTYPANKPHLPASIPPLVKE*WLPTQH
Trigger: ATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGG...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCGCAGAAGTCATTGGGTaGAGCTTTTGGGAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: AICQGWQGRDTASEYLMTAEVIG*SFWESS
Trigger: AGAGCTTTCCCAAAAGCTCCACCCAATGACTTCTGC...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCGGAAGCAGAAGTCATTaGGTGGAGCTTTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPGSRSH*VELLGK
Trigger: CTTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCC...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATTTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTC +
Preference number: 2 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNFLGEL*VKMLQV
Trigger: GACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAA...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR TCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTGTCACATTTGGGTTaGAGGGTGGAGTTAGCCTCT +
Preference number: 2 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSLSHLG*RVELAS
Trigger: AGAGGCTAACTCCACCCTTCAACCCAAATGTGACAG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR GCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATTCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 2 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYSDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGCAGAAGTCATTGGGTaGAGCTTTTGGGAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: LGIVTYPANKPHLPASIPAEVIG*SFWESS
Trigger: AGAGCTTTCCCAAAAGCTCCACCCAATGACTTCTGC...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTCTGGTAAAAGAGTGCTaGCTGCCTACCCAACATTCT +
Preference number: 2 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCLVKEC*LPTQHS
Trigger: AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAG...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTGATGTCATCATCCTCTaGCGCATAAGAAAATCCCAG +
Preference number: 2 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLDVIIL*RIRKSQ
Trigger: CTGGGATTTTCTTATGCGCCAGAGGATGATGACATC...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR GCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVNSGSK*FKSAGP
Trigger: AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTT...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
3UTR-3UTR GCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAATTTAAAAGCGCCCTTTaGTCTTCTCCCCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEFKSAL*SSPLSS
Trigger: GGAGGAAAGGGGAGAAGAGCAAAGGGCGCTTTTAAA...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAGGGTGGTTAGTGAGATaGAAGCAGAAGTCATTGGGT +
Preference number: 2 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEGWLVR*KQKSLG
Trigger: ACCCAATGACTTCTGCTTCCATCTCACTAACCACCC...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR TCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGATATTGATACCCTATaGGCTTGTTACATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LGIVTYPANKPHLPASIPDIDTL*ACYISV
Trigger: GACAGAGATGTAACAAGCTCATAGGGTATCAATATC...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
3UTR-3UTR TCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATGATATTGATACCCTATaGGCTTGTTACATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYDIDTL*ACYISV
Trigger: GACAGAGATGTAACAAGCTCATAGGGTATCAATATC...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
3UTR-3UTR CAA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGATCCCAGGAATGCACTaGAGGCCCCAGAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMIPGMH*RPQSCW
Trigger: CCAGCAGCTCTGGGGCCTCAAGTGCATTCCTGGGAT...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR CAA 90 bp TGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGCAGAAAGGCTGGGCACTaGGACCTCGGAGGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: WSWQENYSWRLPEMQKESRKAGH*DLGGGD
Trigger: GTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCT...GCTCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
3UTR CCA 72 bp CCACATCTCCCAGCCTCCATTCCAGGTAGGGGTGGGTaGTTAGTGAGATGGAAGCAGAAGTCATTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: PHLPASIPGRGG*LVRWKQKSLGG
Trigger: TCCACCCAATGACTTCTGCTTCCATCTCACTAACCACCCACCCCTACCTGGAATGGAGGCTGGGAGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR CCA 72 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTaGAGCAAGAAGGGCTTGGTCCTGGCTCTGAGCCAC +
Preference number: 3 (lower is better)
Translates to: SSGFSVHTTPSC*SKKGLVLALSH
Trigger: GTGGCTCAGAGCCAGGACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
3UTR TCA 72 bp CATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTaGGTATCTGATGACCTGTCCTGCCAGTCCTGGACT +
Preference number: 3 (lower is better)
Translates to: HLSRLAGQRYSL*VSDDLSCQSWT
Trigger: AGTCCAGGACTGGCAGGACAGGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR CCA 72 bp GCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTCAC +
Preference number: 3 (lower is better)
Translates to: ANGLGHSFLGEL*VKMLQVSRSCH
Trigger: GTGACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR CAA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTTGGAAGCAGAAGTCATaGGGTGGAGCTTTTGGGAAA +
Preference number: 3 (lower is better)
Translates to: VTYPANKPHLPASIPGRGWKQKS*GGAFGK
Trigger: TTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCCA...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR GCA 72 bp TTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCTGTTGAAGACCTCACA +
Preference number: 3 (lower is better)
Translates to: LDTASWVNSGSK*FKSAGPVEDLT
Trigger: TGTGAGGTCTTCAACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
3UTR GCA 72 bp TTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCTGTCACATTTGGGTTG +
Preference number: 3 (lower is better)
Translates to: LDTASWVNSGSK*FKSAGPVTFGL
Trigger: CAACCCAAATGTGACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR-3UTR CAA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: AICQGWQGRDTASEYLMTVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CAA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CAA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CAA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: LGIVTYPANKPHLPASIPVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR-3UTR CAA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATAGTGTCAGAACCCCTTaGTTATTAGGGATAGTCACG +
Preference number: 3 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYSVRTP*LLGIVT
Trigger: CGTGACTATCCCTAATAACAAAGGGGTTCTGACACT...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
3UTR TCA 72 bp TTAAGAGGAAAAGGCAATAAAATCACCAGCACACACTaGTCCAAGAAAGTTCCTTCCCTTGTCTCCCAACCA +
Preference number: 3 (lower is better)
Translates to: LRGKGNKITSTH*SKKVPSLVSQP
Trigger: TGGTTGGGAGACAAGGGAAGGAACTTTCTTGGATCAGTGTGTGCTGGTGATTTTATTGCCTTTTCCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
3UTR TCA 72 bp TCTTTCAGCGTTCTTAGCACATGTGAAAGCTTAACATaGACTCTTCCTGACCCAGTTTTGATCTCTAATAGC +
Preference number: 3 (lower is better)
Translates to: SFSVLSTCESLT*TLPDPVLISNS
Trigger: GCTATTAGAGATCAAAACTGGGTCAGGAAGAGTTCATGTTAAGCTTTCACATGTGCTAAGAACGCTGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR TCA 90 bp CAGAAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAAGCTTGGTCCTGGCTCTaGGCCACAGGCAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: QKGWALGPRRRRLQPHPKAWSWL*ATGRPH
Trigger: GTGAGGCCTGCCTGTGGCTCAGAGCCAGGACCAAGC...TTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR GCA 90 bp CCAGAAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAACCCACGAGGAAGGGGTaGCGCACGTTCTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PERLGTWTSEEETPTPPKPTRKG*RTFFRS
Trigger: GCTTCTGAAGAACGTGCGGCACCCCTTCCTCGTGGG...TTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR GCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTTTGAGGCCCCAGAGCTaGTGGCCACAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPLRPQS*WPQCQG
Trigger: CCCCTGACACTGTGGCCAGCAGCTCTGGGGCCTCAA...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCTGTTCCCATTGGCCCTaGAGGGCTGTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: GPRRRRLQPHPKQRTKSTCSHWP*RAVDLG
Trigger: CCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACA...GGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTCAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: VTYPANKPHLPASIPGRGQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPRRRRLQPHPKQRTKSTSAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...GGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp AGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGAGAGCCCAGAAAGGCTaGGCACTTGGACCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RLGTWTSEEETPTPPKTKRAQKG*ALGPRR
Trigger: CCTCCGAGGTCCAAGTGCCCAGCCTTTCTGGGCTCT...CTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp GATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGTCCTGGGCTTGGTCCTGGCTCTaGGCCACAGGCAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DLVSTQPLAVGARRAWSWAWSWL*ATGRPH
Trigger: GTGAGGCCTGCCTGTGGCTCAGAGCCAGGACCAAGC...CCAGGACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp GGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACAGACTTCTTCCCCGTaGTTCCTGGGGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GHSVRGTANGLGHSFLGEQTSSP*FLGQEA
Trigger: AGCCTCCTGCCCCAGGAATCACGGGGAAGAAGTCTG...TTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTTGAGGCCCCAGAGCTaGTGGCCACAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMLRPQS*WPQCQG
Trigger: CCCCTGACACTGTGGCCAGCAGCTCTGGGGCCTCAA...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGACAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: GGPGRRTIHGGCQRCRRRQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...TCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp GCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGAAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: AGHLDLGGGDSNPTQNKGRALPR*HSRARS
Trigger: ACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCT...TCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp CCAGAAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAACTGGAGGCACAATCCTaGCTTGTCAAGCAACCTTCC +
Preference number: 4 (lower is better)
Translates to: PERLGTWTSEEETPTPPKLEAQS*LVKQPS
Trigger: GGAAGGTTGCTTGACAAGTCAGGATTGTGCCTCCAG...TTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648083.1
CDS-3UTR GCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTACGCCCCATCAGACTTaGGCTTGGCCAGTAGGACCT +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPTPHQT*AWPVGP
Trigger: AGGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGT...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTCATCTCGTAGAGGACTaGCCCCAAGCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPHLVED*PQAPPV
Trigger: GACTGGTGGTGCTTGGGGGCAGTCCTCTACGAGATG...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCCCCCATGCACGGCTCTaGCCTCTTCTCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GPRRRRLQPHPKQRTKSTPHARL*PLLSLH
Trigger: ATGAAGAGAGAGAAGAGGGCAGAGCCGTGCATGGGG...GGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR GCA 90 bp GGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGGATTTTGGGGAGCAGCCCCATaGACGGCTCTGCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGGDSNPTQNKGPSPPGFWGAAP*TALPSS
Trigger: AGAAGAGGGCAGAGCCGTGCATGGGGCTGCTCCCCA...AAATCCTGGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp TCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCATGTTCCCATTGGCCCTaGAGGGCTGTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGVQPMDLDTASWVNSGSCSHWP*RAVDLG
Trigger: CCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACA...TGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp AGAGCTGCTGGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAAGHSVRGTANGLGHSFGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...GAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCCAGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp AAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGWALGPRRRRLQPHPKQGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...TTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGGTAGCCAATGGCGCTaGCCACCTCAGCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMGSQWR*PPQQRR
Trigger: TCTACGCTGCTGAGGTGGCCAGCGCCATTGGCTACC...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCGGTAGCCAATGGCGCTaGCCACCTCAGCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: TWTSEEETPTPPKTKDQVGSQWR*PPQQRR
Trigger: TCTACGCTGCTGAGGTGGCCAGCGCCATTGGCTACC...GACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VTYPANKPHLPASIPGRGSAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTTGTGGAGAAGGCTTTaGAGGAGGTCACAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HSVRGTANGLGHSFLGELLWRRL*RRSQAA
Trigger: GGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAA...GAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTTTGTGGAGAAGGCTTTaGAGGAGGTCACAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VTYPANKPHLPASIPGRGLWRRL*RRSQAA
Trigger: GGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAA...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp AAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAACCCCATGCACGGCTCTaGCCTCTTCTCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KGWALGPRRRRLQPHPKQPHARL*PLLSLH
Trigger: ATGAAGAGAGAGAAGAGGGCAGAGCCGTGCATGGGG...TTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATAGGGATAAAGGGGGATaGTCAGGGTGTGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNRDKGG*SGCGPS
Trigger: GGAGGGGCCACACCCTGACCATCCCCCTTTATCCCT...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGTAGCCAATGGCGCTaGCCACCTCAGCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNGSQWR*PPQQRR
Trigger: TCTACGCTGCTGAGGTGGCCAGCGCCATTGGCTACC...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNSAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNPSRCL*SLWRRL
Trigger: AAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGGATTTAGAGCCCAGAAAGGCTaGGCACTTGGACCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGDSNPTQNKGPSPPGFRAQKG*ALGPRR
Trigger: CCTCCGAGGTCCAAGTGCCCAGCCTTTCTGGGCTCT...AAATCCTGGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCGCACCTGCCACCGCCTaGGGGTTTCCTACCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSAPATA*GFPTRG
Trigger: ACCTCGGGTAGGAAACCCTCAGGCGGTGGCAGGTGC...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR TCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMRALPR*HSRARS
Trigger: ACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCT...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp TCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: SGVQPMDLDTASWVNSGSRALPR*HSRARS
Trigger: ACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCT...TGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR TCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCGCAGCTCTGCGAGTCTaGGGAGAGGCCTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPAALRV*GEASRR
Trigger: TCTCCTAGAGGCCTCTCCTCAGACTCGCAGAGCTGC...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423407.7
CDS-3UTR GCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCGGCTTCAGGCACCACTaGCCTCTCCATCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTGFRHH*PLHPPL
Trigger: TAGGGGAGGATGGAGAGGGCAGTGGTGCCTGAAGCC...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR GCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTCCCACGAGGAAGGGGTaGCGCACGTTCTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLPTRKG*RTFFRS
Trigger: GCTTCTGAAGAACGTGCGGCACCCCTTCCTCGTGGG...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCCCACGAGGAAGGGGTaGCGCACGTTCTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTPTRKG*RTFFRS
Trigger: GCTTCTGAAGAACGTGCGGCACCCCTTCCTCGTGGG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTTCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPSDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAATCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 4 (lower is better)
Translates to: GHSVRGTANGLGHSFLGESDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...TTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCATGGGGAGCAGCCCCATaGACGGCTCTGCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGIVTYPANKPHLPASIPWGAAP*TALPSS
Trigger: AGAAGAGGGCAGAGCCGTGCATGGGGCTGCTCCCCA...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373100.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTATGATCAGGCAGCTCTaGGAGTCTGAGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VTYPANKPHLPASIPGRGMIRQL*ESEERP
Trigger: AGGCCTCTCCTCAGACTCGCAGAGCTGCCTGATCAT...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423407.7
CDS-3UTR CCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCTGTTCCCATTGGCCCTaGAGGGCTGTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTCSHWP*RAVDLG
Trigger: CCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACA...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMSKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGCAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: GFHQDLVSTQPLAVGARRQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...CCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAGCACCACGTGTCCCTaGCAGTCCAAGAGAATGTTC +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPSTTCP*QSKRMF
Trigger: GAACATTCTCTTGGACTGCCAGGGACACGTGGTGCT...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPPSRCL*SLWRRL
Trigger: AAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: HSFLGELWVKMLQVSRSCPSRCL*SLWRRL
Trigger: AAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...ACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGCCAGGTAGGGGTGGGTaGTTAGTGAGATGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMPGRGG*LVRWKQ
Trigger: CTGCTTCCATCTCACTAACCACCCACCCCTACCTGG...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGCAGGAGAACTATTCATaGAGGTTGCCAGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GWALGPRRRRLQPHPKQRQENYS*RLPEMQ
Trigger: CTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTG...CCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTAGGGAGGAGCAGGCATaGGAGAGTTGGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCREEQA*ESWCWG
Trigger: CCCCCAACACCAACTCTCTCATGCCTGCTCCTCCCT...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR TCA 90 bp GTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: VVLAGELFMEVARDAEGERALPR*HSRARS
Trigger: ACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCT...CTCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR GCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATCCGAAGCACTTCAGGTaGCAAGTACTCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNPKHFR*QVLRGT
Trigger: GGTACCCCTGAGTACTTGGCACCTGAAGTGCTTCGG...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCATCTCGTAGAGGACTaGCCCCAAGCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTHLVED*PQAPPV
Trigger: GACTGGTGGTGCTTGGGGGCAGTCCTCTACGAGATG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCTTGAGGCCCCAGAGCTaGTGGCCACAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSLRPQS*WPQCQG
Trigger: CCCCTGACACTGTGGCCAGCAGCTCTGGGGCCTCAA...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp ACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCGGAGGTTGCCAGAGATaGAGAAGGAGAGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TWTSEEETPTPPKTKDQVGGCQR*RRRAQK
Trigger: TTTCTGGGCTCTCCTTCTGCATCTCTGGCAACCTCC...GACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTGGAGGGCTGTGGACTTaGGGTCCCAGCTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSGGLWT*GPSWAR
Trigger: TCTAGCCCAGCTGGGACCCCAAGTCCACAGCCCTCC...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGTGTTCCCATTGGCCCTaGAGGGCTGTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSGFSVHTTPSCWSKKGLCSHWP*RAVDLG
Trigger: CCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACA...CAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp GATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGTCCTGGTCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: DLVSTQPLAVGARRAWSWSKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...CCAGGACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp TTGAAGGGTGGAGTTAGCCTCTTGTGGTACAGGTCATCCCAGTTTATGGGGCTGGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LKGGVSLLWYRSSQFMGLGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...CAGCCCCATAAACTGGGATGACCTGTACCACAAGAGGCTAACTCCACCCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATCAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTGGTAGCCAATGGCGCTaGCCACCTCAGCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCGSQWR*PPQQRR
Trigger: TCTACGCTGCTGAGGTGGCCAGCGCCATTGGCTACC...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGGTAGCCAATGGCGCTaGCCACCTCAGCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SSGFSVHTTPSCWSKKGLGSQWR*PPQQRR
Trigger: TCTACGCTGCTGAGGTGGCCAGCGCCATTGGCTACC...CAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVSAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp GGACCAAGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPSPPGFHQDLVSTQPLASAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...AGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp CACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCCAGGGGTACAGCCAATaGACTTGGACACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HSVRGTANGLGHSFLGELQGYSQ*TWTQLP
Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTG...GAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATCCAGGTAGGGGTGGGTaGTTAGTGAGATGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNPGRGG*LVRWKQ
Trigger: CTGCTTCCATCTCACTAACCACCCACCCCTACCTGG...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CAGAAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAGGAGAACTATTCATaGAGGTTGCCAGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: QKGWALGPRRRRLQPHPKQENYS*RLPEMQ
Trigger: CTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTG...TTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCCACTGCGCTCTGCCATaGTGTGGCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFHCALP*CGSALS
Trigger: AGAAAGAGCAGAGCCACATCATGGCAGAGCGCAGTG...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR TCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATCTGGAGGCACAATCCTaGCTTGTCAAGCAACCTTCC +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNLEAQS*LVKQPS
Trigger: GGAAGGTTGCTTGACAAGTCAGGATTGTGCCTCCAG...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373100.7
CDS-3UTR TCA 90 bp CCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGCCCAGATGATCAGGCAGCTCTaGAAACTCCAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGRRTIHGGCQRCRRRAQMIRQL*KLQVPA
Trigger: AGCAGGAACCTGGAGTTTTCAGAGCTGCCTGATCAT...CTGGGCTCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp AGAGCTGCTGGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCTATCCACATTTGGGTTaGAGGGTGGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RAAGHSVRGTANGLGHSFYPHLG*RVELAS
Trigger: AGAGGCTAACTCCACCCTTCAACCCAAATGTGGATA...GAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCCAGCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR GCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCTACCTGTGCACCTaGCACCGCCTGAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEPYLCT*HRLRVS
Trigger: GGAAACCCTCAGGCGGTGGCAGGTGCACAGGTAGGG...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR GCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCCCACGAGGAAGGGGTaGCGCACGTTCTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSPTRKG*RTFFRS
Trigger: GCTTCTGAAGAACGTGCGGCACCCCTTCCTCGTGGG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTCCCACGAGGAAGGGGTaGCGCACGTTCTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSPTRKG*RTFFRS
Trigger: GCTTCTGAAGAACGTGCGGCACCCCTTCCTCGTGGG...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCCGAAGCACTTCAGGTaGCAAGTACTCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPPKHFR*QVLRGT
Trigger: GGTACCCCTGAGTACTTGGCACCTGAAGTGCTTCGG...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTTGTGGAGAAGGCTTTaGAGGAGGTCACAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCLWRRL*RRSQAA
Trigger: GGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAA...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGAATCTCAAGAAAGTCTaGTTTGGAGCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMNLKKV*FGAQPL
Trigger: CAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATT...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR GCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTTTTAAAAGCGCCCTTTaGTCTTCTCCCCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPFKSAL*SSPLSS
Trigger: GGAGGAAAGGGGAGAAGAGCAAAGGGCGCTTTTAAA...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGCCTCTGGTAAAAGAGTaGTGGCTGCCTACCCAACAT +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMPLVKE*WLPTQH
Trigger: ATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGG...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GGTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGGAGGTTGCCAGAGATaGAGAAGGAGAGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGPGRRTIHGGCQRCRRRGGCQR*RRRAQK
Trigger: TTTCTGGGCTCTCCTTCTGCATCTCTGGCAACCTCC...TCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp TTGAAGGGTGGAGTTAGCCTCTTGTGGTACAGGTCATCCCAGTTTATGGGGCTGTCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LKGGVSLLWYRSSQFMGLSKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...CAGCCCCATAAACTGGGATGACCTGTACCACAAGAGGCTAACTCCACCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSGFSVHTTPSCWSKKGLGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...CAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTCGCTCTGCCATGATGTaGCTCTGCTCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPRSAMM*LCSFFF
Trigger: AAAGAAGAAAGAGCAGAGCCACATCATGGCAGAGCG...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AAAGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAACGCTCTGCCATGATGTaGCTCTGCTCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KGWALGPRRRRLQPHPKQRSAMM*LCSFFF
Trigger: AAAGAAGAAAGAGCAGAGCCACATCATGGCAGAGCG...TTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485914.2
CDS-3UTR CCA 90 bp AATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCACTTGCAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: NPRCHHPLAHKKIPGMHLQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...CAAGTGCATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCAGCAGCGTAGAACCTaGCCCGGGGCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCQQRRT*PGAPGT
Trigger: GGTTCCTGGAGCCCCGGGCCAGGTTCTACGCTGCTG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTGGTAGCCAATGGCGCTaGCCACCTCAGCAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSGSQWR*PPQQRR
Trigger: TCTACGCTGCTGAGGTGGCCAGCGCCATTGGCTACC...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGGGATCTGTAGCGGCTaGTGCAGAATGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMGICSG*CRMFSY
Trigger: GTATGAGAACATTCTGCACCAGCCGCTACAGATCCC...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCGGGATCTGTAGCGGCTaGTGCAGAATGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: HSVRGTANGLGHSFLGELGICSG*CRMFSY
Trigger: GTATGAGAACATTCTGCACCAGCCGCTACAGATCCC...GAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp CAGCAGGTCCTGTTGAAGACCTCACAAATGGTAGGTGACAAAACCAGGAATCCACCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QQVLLKTSQMVGDKTRNPPSRCL*SLWRRL
Trigger: AAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...TGGATTCCTGGTTTTGTCACCTACCATTTGTGAGGTCTTCAACAGGACCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATCAGGGGTACAGCCAATaGACTTGGACACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNQGYSQ*TWTQLP
Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTG...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTGGGTGGTTAGTGAGATaGAAGCAGAAGTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPGWLVR*KQKSLG
Trigger: ACCCAATGACTTCTGCTTCCATCTCACTAACCACCC...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TTGAAGGGTGGAGTTAGCCTCTTGTGGTACAGGTCATCCCAGTTTATGGGGCTGCCAGGTAGGGGTGGGTaGTTAGTGAGATGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LKGGVSLLWYRSSQFMGLPGRGG*LVRWKQ
Trigger: CTGCTTCCATCTCACTAACCACCCACCCCTACCTGG...CAGCCCCATAAACTGGGATGACCTGTACCACAAGAGGCTAACTCCACCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCATGGTCCTTCTGACTaGAGGCACAATCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: TWTSEEETPTPPKTKDQVHGPSD*RHNPDL
Trigger: CAAGTCAGGATTGTGCCTCCAGTCAGAAGGACCATG...GACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648083.1
CDS-3UTR TCA 90 bp GGACCAAGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTCACTGCGCTCTGCCATaGTGTGGCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GPSPPGFHQDLVSTQPLAHCALP*CGSALS
Trigger: AGAAAGAGCAGAGCCACATCATGGCAGAGCGCAGTG...AGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACTTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485914.2
CDS-3UTR TCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATCTGTCACATTTGGGTTaGAGGGTGGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNLSHLG*RVELAS
Trigger: AGAGGCTAACTCCACCCTTCAACCCAAATGTGACAG...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp GACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTCTGGAGGCACAATCCTaGCTTGTCAAGCAACCTTCC +
Preference number: 4 (lower is better)
Translates to: DTASWVNSGSKCFKSAGPLEAQS*LVKQPS
Trigger: GGAAGGTTGCTTGACAAGTCAGGATTGTGCCTCCAG...AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR TCA 90 bp GGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGGATTTATGATCAGGCAGCTCTaGAAACTCCAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGGDSNPTQNKGPSPPGFMIRQL*KLQVPA
Trigger: AGCAGGAACCTGGAGTTTTCAGAGCTGCCTGATCAT...AAATCCTGGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR GCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCCCGAAGCACTTCAGGTaGCAAGTACTCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVPKHFR*QVLRGT
Trigger: GGTACCCCTGAGTACTTGGCACCTGAAGTGCTTCGG...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCATCTCGTAGAGGACTaGCCCCAAGCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSHLVED*PQAPPV
Trigger: GACTGGTGGTGCTTGGGGGCAGTCCTCTACGAGATG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp TCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGATTGAGGCCCCAGAGCTaGTGGCCACAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSNPRCHHPLAHKKIPGLRPQS*WPQCQG
Trigger: CCCCTGACACTGTGGCCAGCAGCTCTGGGGCCTCAA...TCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp TTGAAGGGTGGAGTTAGCCTCTTGTGGTACAGGTCATCCCAGTTTATGGGGCTGTCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 4 (lower is better)
Translates to: LKGGVSLLWYRSSQFMGLSDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...CAGCCCCATAAACTGGGATGACCTGTACCACAAGAGGCTAACTCCACCCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCTCTGGTAAAAGAGTaGTGGCTGCCTACCCAACAT +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSPLVKE*WLPTQH
Trigger: ATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGG...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCACCCCATGCACGGCTCTaGCCTCTTCTCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LGIVTYPANKPHLPASIPPHARL*PLLSLH
Trigger: ATGAAGAGAGAGAAGAGGGCAGAGCCGTGCATGGGG...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373100.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCTGGGGAGCAGCCCCATaGACGGCTCTGCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLLAIQDVIILWRIRKSWGAAP*TALPSS
Trigger: AGAAGAGGGCAGAGCCGTGCATGGGGCTGCTCCCCA...GGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp TGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACACTATTCATGGAGGTTaGCAGAGATGCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: WTSEEETPTPPKTKDQVHTIHGG*QRCRRR
Trigger: TCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGT...GTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR GCA 90 bp CTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCAAGCTACAAAGTCTaGTTTGGAGCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LGHSFLGELWVKMLQVSRSSYKV*FGAQPL
Trigger: CAGCGGCTGGGCTCCAAAGCAGACTTTGTAGCTTGA...CCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp GTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGAAGCACACTGCGCTCTaGCATGATGTGGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VVLAGELFMEVARDAEGEKHTAL*HDVALF
Trigger: AAAGAGAGCCACATCATGGCAGAGCGCAGTGTGCTT...CTCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648083.1
CDS-3UTR CCA 90 bp CCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCGGAGGGCTGTGGACTTaGGGTCCCAGCTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PSLLAIQDVIILWRIRKSGGLWT*GPSWAR
Trigger: TCTAGCCCAGCTGGGACCCCAAGTCCACAGCCCTCC...GGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGACCAAGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GPSPPGFHQDLVSTQPLAHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...AGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACTTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SSGFSVHTTPSCWSKKGLHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...CAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSESAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTAGCACCACGTGTCCCTaGCAGTCCAAGAGAATGTTC +
Preference number: 4 (lower is better)
Translates to: HSFLGELWVKMLQVSRSCSTTCP*QSKRMF
Trigger: GAACATTCTCTTGGACTGCCAGGGACACGTGGTGCT...ACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGGAGTTAGCCTCTTGTaGTACAGGTCATCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMGVSLL*YRSSQF
Trigger: AAACTGGGATGACCTGTACCACAAGAGGCTAACTCC...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTGGAGTTAGCCTCTTGTaGTACAGGTCATCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VTYPANKPHLPASIPGRGGVSLL*YRSSQF
Trigger: AAACTGGGATGACCTGTACCACAAGAGGCTAACTCC...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTTTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPFLGEL*VKMLQV
Trigger: GACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAA...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCAGGGGTACAGCCAATaGACTTGGACACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPQGYSQ*TWTQLP
Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTG...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTCAGGGGTACAGCCAATaGACTTGGACACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DTASWVNSGSKCFKSAGPQGYSQ*TWTQLP
Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTG...AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp GTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAGGTAGGGGTGGAAGCAGAAGTCATTaGGTGGAGCTTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VTYPANKPHLPASIPGRGGSRSH*VELLGK
Trigger: CTTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCC...ACCCCTACCTGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAGGAAGCAGAAGTCATTaGGTGGAGCTTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SGVQPMDLDTASWVNSGSGSRSH*VELLGK
Trigger: CTTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCC...TGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGGGTGGTTAGTGAGATaGAAGCAGAAGTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMGWLVR*KQKSLG
Trigger: ACCCAATGACTTCTGCTTCCATCTCACTAACCACCC...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATGCAACAAGACCCCTGTaGGCCAGGGTAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYATRPL*ARVAPE
Trigger: TTCTGGAGCTACCCTGGCTCACAGGGGTCTTGTTGC...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR TCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCACTGCGCTCTGCCATaGTGTGGCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSHCALP*CGSALS
Trigger: AGAAAGAGCAGAGCCACATCATGGCAGAGCGCAGTG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSRALPR*HSRARS
Trigger: ACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCT...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCCCACGAGGAAGGGGTaGCGCACGTTCTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCPTRKG*RTFFRS
Trigger: GCTTCTGAAGAACGTGCGGCACCCCTTCCTCGTGGG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTGCTCTACACCTTCCTTaGAGAGGCCAAAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLALHLP*RGQNPS
Trigger: TGACGGATTTTGGCCTCTGCAAGGAAGGTGTAGAGC...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCGCTCTACACCTTCCTTaGAGAGGCCAAAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFALHLP*RGQNPS
Trigger: TGACGGATTTTGGCCTCTGCAAGGAAGGTGTAGAGC...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp GTAGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACACATCTCGTAGAGGACTaGCCCCAAGCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: VANLTLEAICQGWQGRDTHLVED*PQAPPV
Trigger: GACTGGTGGTGCTTGGGGGCAGTCCTCTACGAGATG...TGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATCATCTCGTAGAGGACTaGCCCCAAGCACCACCAGTC +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYHLVED*PQAPPV
Trigger: GACTGGTGGTGCTTGGGGGCAGTCCTCTACGAGATG...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATTTGTGGAGAAGGCTTTaGAGGAGGTCACAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYLWRRL*RRSQAA
Trigger: GGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAA...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTTTTAAAAGCGCCCTTTaGTCTTCTCCCCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSFKSAL*SSPLSS
Trigger: GGAGGAAAGGGGAGAAGAGCAAAGGGCGCTTTTAAA...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTTGGGGAGCAGCCCCATaGACGGCTCTGCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAWGAAP*TALPSS
Trigger: AGAAGAGGGCAGAGCCGTGCATGGGGCTGCTCCCCA...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373077.5
ENST00000373100.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TTGAAGACCTCACAAATGGTAGGTGACAAAACCAGGAATCCAGCTCCGGAGTGTTCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LKTSQMVGDKTRNPAPECSKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...ACACTCCGGAGCTGGATTCCTGGTTTTGTCACCTACCATTTGTGAGGTCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CCA 90 bp GGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGTCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GFHQDLVSTQPLAVGARRSKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...CCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAGGAAGTCGAAGTCCGTaGGCTGGGCATTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEGSRSP*AGHLGW
Trigger: CCAACCCAAATGCCCAGCCCACGGACTTCGACTTCC...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TTGAAGACCTCACAAATGGTAGGTGACAAAACCAGGAATCCAGCTCCGGAGTGTCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: LKTSQMVGDKTRNPAPECHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...ACACTCCGGAGCTGGATTCCTGGTTTTGTCACCTACCATTTGTGAGGTCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGAGTGCAGGTAGCCAATaGCGCTGGCCACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSFTGPSLLAIQDVIILWSAGSQ*RWPPQQ
Trigger: CTGCTGAGGTGGCCAGCGCCATTGGCTACCTGCACT...CCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCGGGATCTGTAGCGGCTaGTGCAGAATGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPGICSG*CRMFSY
Trigger: GTATGAGAACATTCTGCACCAGCCGCTACAGATCCC...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTGGAGTTAGCCTCTTGTaGTACAGGTCATCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSGVSLL*YRSSQF
Trigger: AAACTGGGATGACCTGTACCACAAGAGGCTAACTCC...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCATTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SGVQPMDLDTASWVNSGSFLGEL*VKMLQV
Trigger: GACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAA...TGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMFLGEL*VKMLQV
Trigger: GACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAA...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAGATGTCATCATCCTCTaGCGCATAAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SGVQPMDLDTASWVNSGSDVIIL*RIRKSQ
Trigger: CTGGGATTTTCTTATGCGCCAGAGGATGATGACATC...TGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTGCAGAAGTCATTGGGTaGAGCTTTTGGGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSAEVIG*SFWESS
Trigger: AGAGCTTTCCCAAAAGCTCCACCCAATGACTTCTGC...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCACCGAAGACAGGCAGTaGACAAGAGAGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLTEDRQ*TREPLS
Trigger: AGAGAGAGGCTCTCTTGTCCACTGCCTGTCTTCGGT...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423407.7
CDS-3UTR TCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAGGCATTTGGGTTGGCTaGAGGCCCCAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEGIWVG*RPQVDV
Trigger: AACATCAACCTGGGGCCTTCAGCCAACCCAAATGCC...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGT +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSERALPR*HSRARS
Trigger: ACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCT...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCCTGTCACATTTGGGTTaGAGGGTGGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLLSHLG*RVELAS
Trigger: AGAGGCTAACTCCACCCTTCAACCCAAATGTGACAG...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTGATATTGATACCCTATaGGCTTGTTACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPDIDTL*ACYISV
Trigger: GACAGAGATGTAACAAGCTCATAGGGTATCAATATC...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR TCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAATGATCAGGCAGCTCTaGAAACTCCAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGIVTYPANKPHLPASIPMIRQL*KLQVPA
Trigger: AGCAGGAACCTGGAGTTTTCAGAGCTGCCTGATCAT...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373100.7
ENST00000496343.6
CDS-3UTR TCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTTCACCGTCCACAGCTaGTTGTGTGCTTCTGACACT +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCFTVHS*LCASDT
Trigger: AGTGTCAGAAGCACACAATCAGCTGTGGACGGTGAA...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR TCA 90 bp AGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGACACTGCGCTCTGCCATaGTGTGGCTCTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPPGFHQDLVSTQPLAVGHCALP*CGSLSS
Trigger: AGAAGAAAGAGAGCCACATCATGGCAGAGCGCAGTG...TCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648083.1
CDS-3UTR GCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGAGGTAAGCAACCCCTaGATGGATGGAACAAGAAAT +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNEVSNP*MDGTRN
Trigger: ATTTCTTGTTCCATCCATGCAGGGGTTGCTTACCTC...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR GCA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTATCCTCCCCTACCTGTaGACCTGCCACCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YISVILHIEIKIQTPGGPILPYL*TCHRLR
Trigger: CCTCAGGCGGTGGCAGGTGCACAGGTAGGGGAGGAT...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR GCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTATCTGTAGCGGCTGGTaGAGAATGTTCTCATACATC +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSICSGW*RMFSYI
Trigger: GATGTATGAGAACATTCTGCACCAGCCGCTACAGAT...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTAATCTCAAGAAAGTCTaGTTTGGAGCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCNLKKV*FGAQPL
Trigger: CAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATT...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR GCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSNSGSK*FKSAGP
Trigger: AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTT...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTTTTAAAAGCGCCCTTTaGTCTTCTCCCCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HSFLGELWVKMLQVSRSCFKSAL*SSPLSS
Trigger: GGAGGAAAGGGGAGAAGAGCAAAGGGCGCTTTTAAA...ACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTCAAGATGGCCAGGGCTaGAAGGATCTTTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSQDGQG*KDLFRA
Trigger: TGCCCTGAAAAGATCCTTCCAGCCCTGGCCATCTTG...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTTGTTCCCATTGGCCCTaGAGGGCTGTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCACSHWP*RAVDLG
Trigger: CCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACA...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GTAGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACATCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VANLTLEAICQGWQGRDTSKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...TGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCGCTCTGCCATGATGTaGCTCTGCTCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTRSAMM*LCSFFF
Trigger: AAAGAAGAAAGAGCAGAGCCACATCATGGCAGAGCG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTAGCACCACGTGTCCCTaGCAGTCCAAGAGAATGTTC +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSSTTCP*QSKRMF
Trigger: GAACATTCTCTTGGACTGCCAGGGACACGTGGTGCT...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCGGGATCTGTAGCGGCTaGTGCAGAATGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLGICSG*CRMFSY
Trigger: GTATGAGAACATTCTGCACCAGCCGCTACAGATCCC...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAPSRCL*SLWRRL
Trigger: AAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCGGAGTTAGCCTCTTGTaGTACAGGTCATCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTGVSLL*YRSSQF
Trigger: AAACTGGGATGACCTGTACCACAAGAGGCTAACTCC...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGATGTCATCATCCTCTaGCGCATAAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNDVIIL*RIRKSQ
Trigger: CTGGGATTTTCTTATGCGCCAGAGGATGATGACATC...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCGCAGAAGTCATTGGGTaGAGCTTTTGGGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFAEVIG*SFWESS
Trigger: AGAGCTTTCCCAAAAGCTCCACCCAATGACTTCTGC...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCGGGTGGTTAGTGAGATaGAAGCAGAAGTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPGWLVR*KQKSLG
Trigger: ACCCAATGACTTCTGCTTCCATCTCACTAACCACCC...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATCCAGGTAGGGGTGGGTaGTTAGTGAGATGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYPGRGG*LVRWKQ
Trigger: CTGCTTCCATCTCACTAACCACCCACCCCTACCTGG...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTCTGGTAAAAGAGTGCTaGCTGCCTACCCAACATTCT +
Preference number: 4 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLLVKEC*LPTQHS
Trigger: AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAG...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCCATGGTCCTTCTGACTaGAGGCACAATCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLHGPSD*RHNPDL
Trigger: CAAGTCAGGATTGTGCCTCCAGTCAGAAGGACCATG...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000373100.7
CDS-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTCATGGTCCTTCTGACTaGAGGCACAATCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCHGPSD*RHNPDL
Trigger: CAAGTCAGGATTGTGCCTCCAGTCAGAAGGACCATG...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373100.7
CDS-3UTR CCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCAGGAGAACCAGCAGTTaGAACCGAAGACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSRRTSS*NRRQAV
Trigger: CACTGCCTGTCTTCGGTTCCAACTGCTGGTTCTCCT...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423407.7
CDS-3UTR CCA 90 bp AGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAACAACCCCTAGCTGTTaGAGCAAGAAGGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SPPGFHQDLVSTQPLAVGTTPSC*SKKGLV
Trigger: GACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGT...TCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR TCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCACTGCGCTCTGCCATaGTGTGGCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCHCALP*CGSALS
Trigger: AGAAAGAGCAGAGCCACATCATGGCAGAGCGCAGTG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp AGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCACTGCGCTCTGCCATaGTGTGGCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSFTGPSLLAIQDVIILWHCALP*CGSALS
Trigger: AGAAAGAGCAGAGCCACATCATGGCAGAGCGCAGTG...CCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR TCA 90 bp TGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTCACATTTGGGTTGAAGGGTGGAAGTTAGGGGGATTTTaGCCTCTCCCTCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: WVKMLQVSRSCHIWVEGWKLGGF*PLPHLV
Trigger: GACAAGATGAGGGAGAGGTCAAAATCCCCCTAACTT...CCACCCTTCAACCCAAATGTGACAGGACCTGCTGACTTGAAGCATTTTGACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGCCATGATGTGGCTCTaGTCTTTCTTCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNAMMWL*SFFFKM
Trigger: CATCTTAAAGAAGAAAGAGCAGAGCCACATCATGGC...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGGCCATGATGTGGCTCTaGTCTTTCTTCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: VVLAGELFMEVARDAEGEAMMWL*SFFFKM
Trigger: CATCTTAAAGAAGAAAGAGCAGAGCCACATCATGGC...CTCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485914.2
CDS-3UTR GCA 90 bp TCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCCGAAGCACTTCAGGTaGCAAGTACTCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SSNPRCHHPLAHKKIPGMPKHFR*QVLRGT
Trigger: GGTACCCCTGAGTACTTGGCACCTGAAGTGCTTCGG...CATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCATCTGTAGCGGCTGGTaGAGAATGTTCTCATACATC +
Preference number: 4 (lower is better)
Translates to: AICQGWQGRDTASEYLMTICSGW*RMFSYI
Trigger: GATGTATGAGAACATTCTGCACCAGCCGCTACAGAT...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLNSGSK*FKSAGP
Trigger: AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTT...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAATCTGATGACCTGTCCTaGCAGTCCTGGACTCCGAAA +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSESDDLS*QSWTPK
Trigger: TTTCGGAGTCCAGGACTGGCAGGACAGGTCATCAGA...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCCCCATGCACGGCTCTaGCCTCTTCTCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCPHARL*PLLSLH
Trigger: ATGAAGAGAGAGAAGAGGGCAGAGCCGTGCATGGGG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373077.5
ENST00000373100.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTTGTTCCCATTGGCCCTaGAGGGCTGTGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: YISVILHIEIKIQTPGGPCSHWP*RAVDLG
Trigger: CCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACA...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCATCAGACTTGCGCTTaGCCAGTAGGACCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCHQTCA*PVGPSR
Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCCGCTCTGCCATGATGTaGCTCTGCTCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVRSAMM*LCSFFF
Trigger: AAAGAAGAAAGAGCAGAGCCACATCATGGCAGAGCG...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTCGCTCTGCCATGATGTaGCTCTGCTCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCRSAMM*LCSFFF
Trigger: AAAGAAGAAAGAGCAGAGCCACATCATGGCAGAGCG...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCACGCTCTGCCATGATGTaGCTCTGCTCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGIVTYPANKPHLPASIPRSAMM*LCSFFF
Trigger: AAAGAAGAAAGAGCAGAGCCACATCATGGCAGAGCG...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATAGCACCACGTGTCCCTaGCAGTCCAAGAGAATGTTC +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYSTTCP*QSKRMF
Trigger: GAACATTCTCTTGGACTGCCAGGGACACGTGGTGCT...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTGCAGAAGTCATTGGGTaGAGCTTTTGGGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCAEVIG*SFWESS
Trigger: AGAGCTTTCCCAAAAGCTCCACCCAATGACTTCTGC...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTGGAAGCAGAAGTCATTaGGTGGAGCTTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCGSRSH*VELLGK
Trigger: CTTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCC...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCGGGTGGTTAGTGAGATaGAAGCAGAAGTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLGWLVR*KQKSLG
Trigger: ACCCAATGACTTCTGCTTCCATCTCACTAACCACCC...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCCTGGTAAAAGAGTGCTaGCTGCCTACCCAACATTCT +
Preference number: 4 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLLVKEC*LPTQHS
Trigger: AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAG...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAGGATGGAACAAGAAATaGTATCCCCTGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEGWNKK*YPLDPD
Trigger: GTCTGGGTCCAGGGGATATCATTTCTTGTTCCATCC...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR TCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACTGTCACATTTGGGTTaGAGGGTGGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSELSHLG*RVELAS
Trigger: AGAGGCTAACTCCACCCTTCAACCCAAATGTGACAG...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTGATATTGATACCCTATaGGCTTGTTACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSDIDTL*ACYISV
Trigger: GACAGAGATGTAACAAGCTCATAGGGTATCAATATC...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR TCA 90 bp GTAGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAATGATCAGGCAGCTCTaGAAACTCCAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VANLTLEAICQGWQGRDTMIRQL*KLQVPA
Trigger: AGCAGGAACCTGGAGTTTTCAGAGCTGCCTGATCAT...TGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373077.5
ENST00000373100.7
ENST00000496343.6
CDS-3UTR TCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTATCACCAGCACACACTaGTCCAAGAAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSITSTH*SKKVPS
Trigger: GGAAGGAACTTTCTTGGATCAGTGTGTGCTGGTGAT...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp CTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGGCCATGATGTGGCTCTaGTCTTTCTTCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: LGHSFLGELWVKMLQVSRAMMWL*SFFFKM
Trigger: CATCTTAAAGAAGAAAGAGCAGAGCCACATCATGGC...CCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAGCTCTACACCTTCCTTaGAGAGGCCAAAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEALHLP*RGQNPS
Trigger: TGACGGATTTTGGCCTCTGCAAGGAAGGTGTAGAGC...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCAATCTGTAGCGGCTGGTaGAGAATGTTCTCATACATC +
Preference number: 4 (lower is better)
Translates to: LGIVTYPANKPHLPASIPICSGW*RMFSYI
Trigger: GATGTATGAGAACATTCTGCACCAGCCGCTACAGAT...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCATCTGTAGCGGCTGGTaGAGAATGTTCTCATACATC +
Preference number: 4 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVICSGW*RMFSYI
Trigger: GATGTATGAGAACATTCTGCACCAGCCGCTACAGAT...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATAATCTCAAGAAAGTCTaGTTTGGAGCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYNLKKV*FGAQPL
Trigger: CAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATT...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR GCA 90 bp GTAGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACACCTCTGGTAAAAGAGTaGTGGCTGCCTACCCAACAT +
Preference number: 4 (lower is better)
Translates to: VANLTLEAICQGWQGRDTPLVKE*WLPTQH
Trigger: ATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGG...TGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGACTATTCATGGAGGTTaGCAGAGATGCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSGFSVHTTPSCWSKKGLTIHGG*QRCRRR
Trigger: TCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGT...CAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTTCGAAGTCCGTGGGCTaGGCATTTGGGTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCASKSVG*AFGLAE
Trigger: TTCAGCCAACCCAAATGCCCAGCCCACGGACTTCGA...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GGACCAAGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTCGCTCTGCCATGATGTaGCTCTCTTTCTTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GPSPPGFHQDLVSTQPLARSAMM*LSFFFK
Trigger: CTTAAAGAAGAAAGAGAGCCACATCATGGCAGAGCG...AGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACTTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648083.1
CDS-3UTR TCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCTGTCACATTTGGGTTaGAGGGTGGAGTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCLSHLG*RVELAS
Trigger: AGAGGCTAACTCCACCCTTCAACCCAAATGTGACAG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR TCA 90 bp TTACTAATACCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCATGATCAGGCAGCTCTaGAAACTCCAGGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLIPAGLSSFTGPSLLAIMIRQL*KLQVPA
Trigger: AGCAGGAACCTGGAGTTTTCAGAGCTGCCTGATCAT...GATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGGTATTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR TCA 90 bp CCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCTGGGTGAACAAGACTTaGGGAAGGGAAAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PSLLAIQDVIILWRIRKSWVNKT*GRERVG
Trigger: TCCCACTCTTTCCCTTCCTCAAGTCTTGTTCACCCA...GGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR TCA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCATGTGAAAGCTTAACATaGACTCTTCCTGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGIVTYPANKPHLPASIPCESLT*TLPDPV
Trigger: AACTGGGTCAGGAAGAGTTCATGTTAAGCTTTCACA...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCGCTCTACACCTTCCTTaGAGAGGCCAAAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCALHLP*RGQNPS
Trigger: TGACGGATTTTGGCCTCTGCAAGGAAGGTGTAGAGC...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp AATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCACTTGGCTCTACACCTTCCTTaGAGAGGCCAAAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: NPRCHHPLAHKKIPGMHLALHLP*RGQNPS
Trigger: TGACGGATTTTGGCCTCTGCAAGGAAGGTGTAGAGC...CAAGTGCATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTCCGAAGCACTTCAGGTaGCAAGTACTCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: YISVILHIEIKIQTPGGPPKHFR*QVLRGT
Trigger: GGTACCCCTGAGTACTTGGCACCTGAAGTGCTTCGG...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR GCA 90 bp CCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCAATCTCAAGAAAGTCTaGTTTGGAGCCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PSLLAIQDVIILWRIRKSNLKKV*FGAQPL
Trigger: CAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATT...GGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR GCA 90 bp TCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCCTCTGGTAAAAGAGTaGTGGCTGCCTACCCAACAT +
Preference number: 4 (lower is better)
Translates to: SSNPRCHHPLAHKKIPGMPLVKE*WLPTQH
Trigger: ATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGG...CATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCCATTCATCTCTaGCTAGTATTCCATGTATGG +
Preference number: 4 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFKSIHL*LVFHVW
Trigger: CCATACATGGAATACTAGGCAGAGATGAATGGACTT...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCGGGATCTGTAGCGGCTaGTGCAGAATGTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCGICSG*CRMFSY
Trigger: GTATGAGAACATTCTGCACCAGCCGCTACAGATCCC...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTCAGGGGTACAGCCAATaGACTTGGACACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAQGYSQ*TWTQLP
Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTG...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCGATGTCATCATCCTCTaGCGCATAAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSDVIIL*RIRKSQ
Trigger: CTGGGATTTTCTTATGCGCCAGAGGATGATGACATC...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GTAGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCAGAAGTCATTGGGTaGAGCTTTTGGGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VANLTLEAICQGWQGRDTAEVIG*SFWESS
Trigger: AGAGCTTTCCCAAAAGCTCCACCCAATGACTTCTGC...TGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCACTTGAGCTTTTCTGGTGCCTaGCCCGAGTGTATCCACATT +
Preference number: 4 (lower is better)
Translates to: NPRCHHPLAHKKIPGMHLSFSGA*PECIHI
Trigger: AATGTGGATACACTCGGGCCAGGCACCAGAAAAGCT...CAAGTGCATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR GCA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCGCCATGATGTGGCTCTaGTCTTTCTTCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSAMMWL*SFFFKM
Trigger: CATCTTAAAGAAGAAAGAGCAGAGCCACATCATGGC...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR GCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAAACTCTGGGTCAAAATaGTTCAAGTCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSENSGSK*FKSAGP
Trigger: AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTT...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCGGAGTTAGCCTCTTGTaGTACAGGTCATCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCGVSLL*YRSSQF
Trigger: AAACTGGGATGACCTGTACCACAAGAGGCTAACTCC...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAATTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEFLGEL*VKMLQV
Trigger: GACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAA...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp AATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCACTTGCTGGTAAAAGAGTGCTaGCTGCCTACCCAACATTCT +
Preference number: 4 (lower is better)
Translates to: NPRCHHPLAHKKIPGMHLLVKEC*LPTQHS
Trigger: AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAG...CAAGTGCATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CCA 90 bp AGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGGAAAAGAAGCTTTTCTaGTGCCTGGCCCGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SSFTGPSLLAIQDVIILWEKKLF*CLARVY
Trigger: ATACACTCGGGCCAGGCACCAGAAAAGCTTCTTTTC...CCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR TCA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTGATATTGATACCCTATaGGCTTGTTACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSDIDTL*ACYISV
Trigger: GACAGAGATGTAACAAGCTCATAGGGTATCAATATC...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR GCA 90 bp TCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATCTGTAGCGGCTGGTaGAGAATGTTCTCATACATC +
Preference number: 4 (lower is better)
Translates to: SSSNPRCHHPLAHKKIPGICSGW*RMFSYI
Trigger: GATGTATGAGAACATTCTGCACCAGCCGCTACAGAT...TCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTCTGGTAAAAGAGTGCTaGCTGCCTACCCAACATTCT +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCALVKEC*LPTQHS
Trigger: AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAG...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp TTGAAGACCTCACAAATGGTAGGTGACAAAACCAGGAATCCAGCTCCGGAGTGTCTAGTATTCCATGTATaGTTCTCTCTCCAGGGTATA +
Preference number: 4 (lower is better)
Translates to: LKTSQMVGDKTRNPAPECLVFHV*FSLQGI
Trigger: TATACCCTGGAGAGAGAACCATACATGGAATACTAG...ACACTCCGGAGCTGGATTCCTGGTTTTGTCACCTACCATTTGTGAGGTCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CCA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCCTGGCACTATTAAGATaGAAATCAGTGTGTATCTTT +
Preference number: 4 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFLALLR*KSVCIF
Trigger: AAAGATACACACTGATTTCCATCTTAATAGTGCCAG...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR TCA 90 bp TTACTAATACCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCTTCCTGACCCAGTTTTaGTCTCTAATAGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLIPAGLSSFTGPSLLAIFLTQF*SLIAQC
Trigger: ACACTGAGCTATTAGAGATCAAAACTGGGTCAGGAA...GATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGGTATTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR GCA 90 bp CCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCGCCATGATGTGGCTCTaGTCTTTCTTCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: PSLLAIQDVIILWRIRKSAMMWL*SFFFKM
Trigger: CATCTTAAAGAAGAAAGAGCAGAGCCACATCATGGC...GGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR GCA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCGCCATGATGTGGCTCTaGTCTTTCTTCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCAMMWL*SFFFKM
Trigger: CATCTTAAAGAAGAAAGAGCAGAGCCACATCATGGC...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTATTCTTTTCAAGAACTaGGGACACCCAGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAILFKN*GHPGQQ
Trigger: TTGTTGCCCTGGGTGTCCCCAGTTCTTGAAAAGAAT...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR CCA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTTTCCTGGGTGAACTCTaGGTCAAAATGCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAFLGEL*VKMLQV
Trigger: GACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAA...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS GCA 90 bp GCCTCTCTCTGTTCTCCCAACAAGGGCCTAAGTGTCTGTGCCTGGTaGCGGCCTGGCCCCAGCACAGAGCTCACAGCTCCCGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: ASLCSPNKGLSVCAW*RPGPSTELTAPGSR
Trigger: GCGGCTGCCGGGAGCTGTGAGCTCTGTGCTGGGGCCAGGCCGGCACCAGGCACAGACACTTAGGCCCTTGTTGGGAGAACAGAGAGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423407.7
ENST00000617268.1
ENST00000647834.1
CDS GCA 90 bp GCTTTGGAGCCCAGCCGCTGCCTCTGGTCCTTGTGGAGAAGGCTTTaGAGGAGGTCACAGGCGGCCACTGTCCGGCCTCCGGGGATCTGT +
Preference number: 5 (lower is better)
Translates to: ALEPSRCLWSLWRRL*RRSQAATVRPPGIC
Trigger: ACAGATCCCCGGAGGCCGGACAGTGGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000496343.6
ENST00000647716.1
ENST00000648530.1
CDS TCA 90 bp CGAAGTCCGTGGGCTGGGCATTTGGGTTGGCTGAAGGCCCCAGGTTaGTGTTCCCATTGGCCCTGGAGGGCTGTGGACTTGGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RSPWAGHLGWLKAPG*CSHWPWRAVDLGSQ
Trigger: CTGGGACCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGGACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000412111.6
ENST00000423407.7
ENST00000426287.2
ENST00000485914.2
ENST00000496343.6
ENST00000617358.1
ENST00000648083.1
ENST00000648530.1
CDS GCA 90 bp CAAGAGAGCCTCTCTCTGTTCTCCCAACAAGGGCCTAAGTGTCTGTaGCTGGTGCCGGCCTGGCCCCAGCACAGAGCTCACAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: QESLSLFSQQGPKCL*LVPAWPQHRAHSSR
Trigger: CCGGGAGCTGTGAGCTCTGTGCTGGGGCCAGGCCGGCACCAGGCACAGACACTTAGGCCCTTGTTGGGAGAACAGAGAGAGGCTCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423407.7
ENST00000617268.1
ENST00000647834.1
CDS CCA 90 bp CGGGATCCGGCAGAGCTTAAGATGGGACTGGAGACTTCTGTTCCCTaGGGAACACCATCTCACCCTAGCGGGGACGGTGGGAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RDPAELKMGLETSVP*GTPSHPSGDGGRGG
Trigger: CCCACCCCTCCCACCGTCCCCGCTAGGGTGAGATGGTGTTCCCCAGGGAACAGAAGTCTCCAGTCCCATCTTAAGCTCTGCCGGATCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS TCA 90 bp CAGCCCAGGGAAGCCTCCCTGTGGGCCCACCCACCTCTCCCCCGTTaGCATAGTCGAGCACGAAGTAGAGCTTCTCAGGTGTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: QPREASLWAHPPLPR*HSRARSRASQVSGR
Trigger: CCTTCCAGACACCTGAGAAGCTCTACTTCGTGCTCGACTATGTCAACGGGGGAGAGGTGGGTGGGCCCACAGGGAGGCTTCCCTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617358.1
CDS-3UTR CAA 90 bp GGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GPRRRRLQPHPKQRTKSTPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...GGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp AGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: RLGTWTSEEETPTPPKTKPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...CTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS TCA 90 bp GGAACCGGCGCTCCCGCTGCAGGTGGAAGAAGAGCTCTCCCCCGTTaGCATAGTCGAGCACGAAGTAGAGCTTCTCAGGTGTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GTGAPAAGGRRALPR*HSRARSRASQVSGR
Trigger: CCTTCCAGACACCTGAGAAGCTCTACTTCGTGCTCGACTATGTCAACGGGGGAGAGCTCTTCTTCCACCTGCAGCGGGAGCGCCGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000412111.6
ENST00000423407.7
ENST00000426287.2
ENST00000485914.2
ENST00000496343.6
ENST00000648083.1
ENST00000648530.1
CDS-3UTR CAA 90 bp CACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: HSVRGTANGLGHSFLGELPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...GAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp GCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: AGHLDLGGGDSNPTQNKGPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...TCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp GGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGAAAGGCTGGGCACTaGGACCTCGGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: GPRRRRLQPHPKQRTKSTRKAGH*DLGGGD
Trigger: GTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCT...GGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp AGGCTGGGCACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGAGAAAGGCTGGGCACTaGGACCTCGGAGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: RLGTWTSEEETPTPPKTKRKAGH*DLGGGD
Trigger: GTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCTTTCT...CTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGTGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp GGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAAGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GHSVRGTANGLGHSFLGEAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...TTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp TGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: WTSEEETPTPPKTKDQVHNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...GTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp GGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTTGTGGAGAAGGCTTaGCAGGAGGTCACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GHSVRGTANGLGHSFLGELVEKA*QEVTGG
Trigger: GCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAG...TTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAGGTTGATGTTCCCATaGGCCCTGGAGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPRLMFP*ALEGCG
Trigger: TCCACAGCCCTCCAGGGCCAATGGGAACATCAACCT...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp ACTTGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: TWTSEEETPTPPKTKDQVAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...GACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp GGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGGATTTGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GGGDSNPTQNKGPSPPGFGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...AAATCCTGGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: HSVRGTANGLGHSFLGELNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...GAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTTCAAGAAAGTCTGCTTaGGAGCCCAGCCGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPSRKSA*EPSRCL
Trigger: GAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGA...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CAA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGGCTACAAAGTCTGCTTaGGAGCCCAGCCGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMATKSA*EPSRCL
Trigger: GAGGCAGCGGCTGGGCTCCAAAGCAGACTTTGTAGC...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS GCA 90 bp CACCTGCCACCGCCTGAGGGTTTCCTACCCGAGGTAAGCAACCCCTaGATGGATGGAACAAGAAATGATATCCCCTGGACCCAGACTTCC +
Preference number: 5 (lower is better)
Translates to: HLPPPEGFLPEVSNP*MDGTRNDIPWTQTS
Trigger: GGAAGTCTGGGTCCAGGGGATATCATTTCTTGTTCCATCCATGCAGGGGTTGCTTACCTCGGGTAGGAAACCCTCAGGCGGTGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR CAA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LGHSFLGELWVKMLQVSRGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...CCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp GATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGTCCTGGCCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: DLVSTQPLAVGARRAWSWPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...CCAGGACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp GGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACCAGGATTTAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: GGGDSNPTQNKGPSPPGFNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...AAATCCTGGTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATATCCCAGGAATGCACTaGAGGCCCCAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNIPGMH*RPQSCW
Trigger: CCAGCAGCTCTGGGGCCTCAAGTGCATTCCTGGGAT...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS TCA 90 bp TGGAGGCACAATCCTGACTTGTCAAGCAACCTTCCCAGTCAGGAATaGCCTGTCACCCACTCGCTCCTGGCTCCCAAACCGGCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: WRHNPDLSSNLPSQE*PVTHSLLAPKPAQV
Trigger: AACTTGAGCCGGTTTGGGAGCCAGGAGCGAGTGGGTGACAGGTCATTCCTGACTGGGAAGGTTGCTTGACAAGTCAGGATTGTGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647834.1
CDS CCA 90 bp GGCAACAAGACCCCTGTGAGCCAGGGTAGCTCCAGAAGTCCAAGATaGCCAGGGCTGGAAGGATCTTTTCAGGGCATAAAGTCTGAACCC +
Preference number: 5 (lower is better)
Translates to: GNKTPVSQGSSRSPR*PGLEGSFQGIKSEP
Trigger: GGGTTCAGACTTTATGCCCTGAAAAGATCCTTCCAGCCCTGGCCATCTTGGACTTCTGGAGCTACCCTGGCTCACAGGGGTCTTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS CCA 90 bp TTCTTAATCTCAAGAAAGTCTGCTTTGGAGCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTTTGCAGGAGGTCACAGGCGGCCACT +
Preference number: 5 (lower is better)
Translates to: FLISRKSALEPSRCL*SLWRRLCRRSQAAT
Trigger: AGTGGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATTAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000647716.1
CDS-3UTR CAA 90 bp GGTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAAGGTTGATGTTCCCATaGGCCCTGGAGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GGPGRRTIHGGCQRCRRRRLMFP*ALEGCG
Trigger: TCCACAGCCCTCCAGGGCCAATGGGAACATCAACCT...TCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: DTASWVNSGSKCFKSAGPAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SSGFSVHTTPSCWSKKGLGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...CAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: RVLAAYPTFSPNVLVSEPPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...GGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: AICQGWQGRDTASEYLMTPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGCATCTGGGATACATCTaGGCTGTAGAAGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMHLGYI*AVEGRQ
Trigger: CTGCCGCCCTTCTACAGCCAAGATGTATCCCAGATG...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCCTTGTGGAGAAGGCTTaGCAGGAGGTCACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFLVEKA*QEVTGG
Trigger: GCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAG...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCATCCCAGGAATGCACTaGAGGCCCCAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFIPGMH*RPQSCW
Trigger: CCAGCAGCTCTGGGGCCTCAAGTGCATTCCTGGGAT...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS GCA 90 bp TACCACAGAATGTGGATGTGGTGTCTTCAGGCTCTACACCTTCCTTaGAGAGGCCAAAATCCGTCAGCACCACGTGTCCCTGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: YHRMWMWCLQALHLP*RGQNPSAPRVPGSP
Trigger: TGGACTGCCAGGGACACGTGGTGCTGACGGATTTTGGCCTCTGCAAGGAAGGTGTAGAGCCTGAAGACACCACATCCACATTCTGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000496343.6
ENST00000648530.1
CDS GCA 90 bp ACATGGTTCTTAATCTCAAGAAAGTCTGCTTTGGAGCCCAGCCGCTaGCTCTGGTCCTTGTGGAGAAGGCTTTGCAGGAGGTCACAGGCG +
Preference number: 5 (lower is better)
Translates to: TWFLISRKSALEPSR*LWSLWRRLCRRSQA
Trigger: CGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATTAAGAACCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000647716.1
CDS-3UTR CAA 90 bp GGACCAAGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GPSPPGFHQDLVSTQPLAAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...AGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTGGCTGGGCATTTGGGTaGGCTGAAGGCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSGWAFG*AEGPRL
Trigger: CAACCTGGGGCCTTCAGCCAACCCAAATGCCCAGCC...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGCCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GGPLVKECWLPTQHSPLMPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...CATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCTCAAGAAAGTCTGCTTaGGAGCCCAGCCGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AICQGWQGRDTASEYLMTSRKSA*EPSRCL
Trigger: GAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGA...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CAA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTGGTGGAGTTAGCCTCTaGTGGTACAGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSGGVSL*WYRSSQ
Trigger: CTGGGATGACCTGTACCACAAGAGGCTAACTCCACC...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AGAGCTGCTGGCCACAGTGTCAGGGGTACAGCCAATGGACTTGGACACAGCTTCAGGCACAATCCTGACTaGTCAAGCAACCTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: RAAGHSVRGTANGLGHSFRHNPD*SSNLPS
Trigger: ACTGGGAAGGTTGCTTGACAAGTCAGGATTGTGCCT...GAAGCTGTGTCCAAGTCCATTGGCTGTACCCCTGACACTGTGGCCAGCAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CAA 90 bp TGGACCTCGGAGGAGGAGACTCCAACCCCACCCAAAACAAAGGACCAAGTCCACAGGCACAATCCTGACTaGTCAAGCAACCTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: WTSEEETPTPPKTKDQVHRHNPD*SSNLPS
Trigger: ACTGGGAAGGTTGCTTGACAAGTCAGGATTGTGCCT...GTGGACTTGGTCCTTTGTTTTGGGTGGGGTTGGAGTCTCCTCCTCCGAGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648083.1
CDS GCA 90 bp CTGTGGCTGTGTGTGTGTTCATGCATCAGTCATTCAGCAAAGGCCTaGTTTCTGCAGGGCCCTTTGCCATGGGTTGGGGATGTAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LWLCVCSCISHSAKA*FLQGPLPWVGDVEE
Trigger: CTCTTCTACATCCCCAACCCATGGCAAAGGGCCCTGCAGAAAGCAGGCCTTTGCTGAATGACTGATGCATGAACACACACACAGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 90 bp ATCAGTCATTCAGCAAAGGCCTGCTTTCTGCAGGGCCCTTTGCCATaGGTTGGGGATGTAGAAGAGGTCAGCCAGGACTGCTTTGTGCAA +
Preference number: 5 (lower is better)
Translates to: ISHSAKACFLQGPLP*VGDVEEVSQDCFVQ
Trigger: TTGCACAAAGCAGTCCTGGCTGACCTCTTCTACATCCCCAACCCATGGCAAAGGGCCCTGCAGAAAGCAGGCCTTTGCTGAATGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS-3UTR CAA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTAGGTTGATGTTCCCATaGGCCCTGGAGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCRLMFP*ALEGCG
Trigger: TCCACAGCCCTCCAGGGCCAATGGGAACATCAACCT...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp ACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTTAGGTTGATGTTCCCATaGGCCCTGGAGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: TASWVNSGSKCFKSAGPVRLMFP*ALEGCG
Trigger: TCCACAGCCCTCCAGGGCCAATGGGAACATCAACCT...AACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CAA 90 bp CAAACACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: QTPGGPLVKECWLPTQHSPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...AGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GGTGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGACCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GGPGRRTIHGGCQRCRRRPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...TCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp GGATTTAGTGTCCACACAACCCCTAGCTGTTGGAGCAAGAAGGGCTTGGTCCTGCCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GFSVHTTPSCWSKKGLVLPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...CAGGACCAAGCCCTTCTTGCTCCAACAGCTAGGGGTTGTGTGGACACTAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTCCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCATCTGGGATACATCTaGGCTGTAGAAGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: AICQGWQGRDTASEYLMTHLGYI*AVEGRQ
Trigger: CTGCCGCCCTTCTACAGCCAAGATGTATCCCAGATG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTTGTGGAGAAGGCTTaGCAGGAGGTCACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSLVEKA*QEVTGG
Trigger: GCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTCTTGTGGAGAAGGCTTaGCAGGAGGTCACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSLVEKA*QEVTGG
Trigger: GCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAG...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TTAGGGATAGTCACGTACCCAGCAAATAAGCCACATCTCCCAGCCTCCATTCCATCAAGAAAGTCTGCTTaGGAGCCCAGCCGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LGIVTYPANKPHLPASIPSRKSA*EPSRCL
Trigger: GAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGA...TGGAATGGAGGCTGGGAGATGTGGCTTATTTGCTGGGTACGTGACTATCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CAA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCATCCCAGGAATGCACTaGAGGCCCCAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSIPGMH*RPQSCW
Trigger: CCAGCAGCTCTGGGGCCTCAAGTGCATTCCTGGGAT...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp ACCAGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTTGGAAGCAGAAGTCATaGGGTGGAGCTTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: TRRPSGKRVLAAYPTFSPWKQKS*GGAFGK
Trigger: TTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCCA...AGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS TCA 90 bp ATAGCAAGCTCCCCCAGCCCCGGAAATCCAGAGTCTAGAATGCTGTaGCCTCTTACCACATTTGGGTTGAAGGGTGGAGTTAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: IASSPSPGNPESRML*PLTTFGLKGGVSLL
Trigger: CAAGAGGCTAACTCCACCCTTCAACCCAAATGTGGTAAGAGGTCACAGCATTCTAGACTCTGGATTTCCGGGGCTGGGGGAGCTTGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS GCA 90 bp GGCCCTTTGCCATGGGTTGGGGATGTAGAAGAGGTCAGCCAGGACTaGTTTGTGCAATTTACATGGTGTGTACCACACAAAAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: GPLPWVGDVEEVSQD*FVQFTWCVPHKSTS
Trigger: GCTGGTGCTTTTGTGTGGTACACACCATGTAAATTGCACAAAGCAGTCCTGGCTGACCTCTTCTACATCCCCAACCCATGGCAAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 90 bp TCATTCAGCAAAGGCCTGCTTTCTGCAGGGCCCTTTGCCATGGGTTaGGGATGTAGAAGAGGTCAGCCAGGACTGCTTTGTGCAATTTAC +
Preference number: 5 (lower is better)
Translates to: SFSKGLLSAGPFAMG*GCRRGQPGLLCAIY
Trigger: GTAAATTGCACAAAGCAGTCCTGGCTGACCTCTTCTACATCCCCAACCCATGGCAAAGGGCCCTGCAGAAAGCAGGCCTTTGCTGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS-3UTR CAA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCAGGTTGATGTTCCCATaGGCCCTGGAGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSRLMFP*ALEGCG
Trigger: TCCACAGCCCTCCAGGGCCAATGGGAACATCAACCT...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAAGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KRVLAAYPTFSPNVLVSEAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...TTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTCCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: HSFLGELWVKMLQVSRSCPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...ACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp GCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCTCTGAGTATCTGATGACCCCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AICQGWQGRDTASEYLMTPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...GGTCATCAGATACTCAGAGGCTGTATCTCTGCCCTGCCAACCTTGACAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTCCGTGGGCTGGGCATTaGGGTTGGCTGAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: YISVILHIEIKIQTPGGPPWAGH*GWLKAP
Trigger: TGGGGCCTTCAGCCAACCCAAATGCCCAGCCCACGG...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CAA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCCCTTTGCCGATGACTTaGAGGAAGTCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLPLPMT*RKSKSV
Trigger: CACGGACTTCGACTTCCTCAAAGTCATCGGCAAAGG...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGACCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SSSNPRCHHPLAHKKIPGPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...TCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp TTACTAATACCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCCATCAGACTTGCGCTaGGCCAGTAGGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LLIPAGLSSFTGPSLLAIPSDLR*ASRTFP
Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCTGATGG...GATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGGTATTAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp AATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCACTTGAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: NPRCHHPLAHKKIPGMHLNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...CAAGTGCATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp AGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAGCCATCTGGGATACATCTaGGCTGTAGAAGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SKPNIGSHLSRLAGQRYSHLGYI*AVEGRQ
Trigger: CTGCCGCCCTTCTACAGCCAAGATGTATCCCAGATG...GCTGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCTTGTGGAGAAGGCTTaGCAGGAGGTCACAGGCGGC +
Preference number: 5 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCLVEKA*QEVTGG
Trigger: GCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTGGTGGAGTTAGCCTCTaGTGGTACAGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: SLFLAAEGNSLLIPAGLSGGVSL*WYRSSQ
Trigger: CTGGGATGACCTGTACCACAAGAGGCTAACTCCACC...ACTGAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCATCATCCTCTGGATCCCAGGAATGCACTaGAGGCCCCAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSFTGPSLLAIQDVIILWIPGMH*RPQSCW
Trigger: CCAGCAGCTCTGGGGCCTCAAGTGCATTCCTGGGAT...CCAGAGGATGATGACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATTGGAAGCAGAAGTCATaGGGTGGAGCTTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNWKQKS*GGAFGK
Trigger: TTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCCA...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TGGTCCTGGCAGGAGAACTATTCATGGAGGTTGCCAGAGATGCAGAAGGAGAGCAACTATTCATGGAGGTaGCCAGAGATGCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: WSWQENYSWRLPEMQKESNYSWR*PEMQKE
Trigger: CTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTT...GCTCTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTTCTCCTGCCAGGACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp AGGAGGCCCTCTGGTAAAAGAGTGCTGGCTGCCTACCCAACATTCTCCCCTAATGAAGTTAGGGGGATTTaGACCTCTCCCTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: RRPSGKRVLAAYPTFSPNEVRGI*TSPSSC
Trigger: ACAAGATGAGGGAGAGGTCAAAATCCCCCTAACTTC...ATTAGGGGAGAATGTTGGGTAGGCAGCCAGCACTCTTTTACCAGAGGGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS GCA 90 bp GGGTCAGGGTATGTGCAGCATGGTGTGTACTGTGTGAGTGTTTTGTaGATAGAGTGCTTCCGTGTGTGTCTGTCTGTGGCTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: GSGYVQHGVYCVSVL*IECFRVCLSVAVYF
Trigger: GAAATACACAGCCACAGACAGACACACACGGAAGCACTCTATGCACAAAACACTCACACAGTACACACCATGCTGCACATACCCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS-3UTR CAA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTGCTGAAGGCCCCAGGTaGATGTTCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAAEGPR*MFPLAL
Trigger: CAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGC...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGAATGCACTTGTCAAGAAAGTCTGCTTaGGAGCCCAGCCGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NPRCHHPLAHKKIPGMHLSRKSA*EPSRCL
Trigger: GAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGA...CAAGTGCATTCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CAA 90 bp GCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTTATGGTGGAGTTAGCCTCTaGTGGTACAGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: AAYPTFSPNVLVSEPLCYGGVSL*WYRSSQ
Trigger: CTGGGATGACCTGTACCACAAGAGGCTAACTCCACC...ATAACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp ATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCTATCCCAGGAATGCACTaGAGGCCCCAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MTCPASPGLRNIIFLLCAIPGMH*RPQSCW
Trigger: CCAGCAGCTCTGGGGCCTCAAGTGCATTCCTGGGAT...AGCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAGTCAGCAGGTCCTGTaGAAGACCTCACAAATGGTA +
Preference number: 5 (lower is better)
Translates to: QPMDLDTASWVNSGSKCFSQQVL*KTSQMV
Trigger: TACCATTTGTGAGGTCTTCAACAGGACCTGCTGACT...GAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS TCA 90 bp TTTCCTACCCGAGGTAAGCAACCCCTGCATGGATGGAACAAGAAATaGTATCCCCTGGACCCAGACTTCCTAACAAACATCTCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: FPTRGKQPLHGWNKK*YPLDPDFLTNISEG
Trigger: CCCTTCTGAGATGTTTGTTAGGAAGTCTGGGTCCAGGGGATATCATTTCTTGTTCCATCCATGCAGGGGTTGCTTACCTCGGGTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS-3UTR CAA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTAACGCCCCATCAGACTaGCGCTTGGCCAGTAGGACC +
Preference number: 5 (lower is better)
Translates to: YISVILHIEIKIQTPGGPNAPSD*RLASRT
Trigger: GGTCCTACTGGCCAAGCGCAAGTCTGATGGGGCGTT...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CAA 90 bp TCTTCTAGCAATCCAAGATGTCATCATCCTCTGGCGCATAAGAAAATCCCAGGACATCTGGGATACATCTaGGCTGTAGAAGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SSSNPRCHHPLAHKKIPGHLGYI*AVEGRQ
Trigger: CTGCCGCCCTTCTACAGCCAAGATGTATCCCAGATG...TCCTGGGATTTTCTTATGCGCCAGAGGATGATGACATCTTGGATTGCTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp TTACTAATACCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCGGTGGAGTTAGCCTCTaGTGGTACAGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: LLIPAGLSSFTGPSLLAIGGVSL*WYRSSQ
Trigger: CTGGGATGACCTGTACCACAAGAGGCTAACTCCACC...GATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGGTATTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373077.5
ENST00000496343.6
CDS-3UTR CAA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCTGGAAGCAGAAGTCATaGGGTGGAGCTTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLWKQKS*GGAFGK
Trigger: TTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCCA...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CCAGCTGGCCTCAGTAGTTTCACAGGTCCTTCTCTTCTAGCAATCCAAGATGTCTGGAAGCAGAAGTCATaGGGTGGAGCTTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PAGLSSFTGPSLLAIQDVWKQKS*GGAFGK
Trigger: TTTCCCAAAAGCTCCACCCAATGACTTCTGCTTCCA...GACATCTTGGATTGCTAGAAGAGAAGGACCTGTGAAACTACTGAGGCCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CAA 90 bp GACACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTAGTGTCAGAACCCCTTaGTTATTAGGGATAGTCACG +
Preference number: 5 (lower is better)
Translates to: DTASWVNSGSKCFKSAGPSVRTP*LLGIVT
Trigger: CGTGACTATCCCTAATAACAAAGGGGTTCTGACACT...AGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS TCA 90 bp TGCTTCAAGTCAGCAGGTCCTGTTGAAGACCTCACAAATGGTAGGTaGCAAAACCAGGAATCCAGCTCCGGAGTGTCTCATTCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: CFKSAGPVEDLTNGR*QNQESSSGVSHSKV
Trigger: GACTTTAGAATGAGACACTCCGGAGCTGGATTCCTGGTTTTGTCACCTACCATTTGTGAGGTCTTCAACAGGACCTGCTGACTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS-3UTR CAA 90 bp GTGCTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: VLAAYPTFSPNVLVSEPLVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...AAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp CTGGCTGCCTACCCAACATTCTCCCCTAATGTCTTAGTGTCAGAACCCCTTTGTAGTGTCAGAACCCCTTaGTTATTAGGGATAGTCACG +
Preference number: 5 (lower is better)
Translates to: LAAYPTFSPNVLVSEPLCSVRTP*LLGIVT
Trigger: CGTGACTATCCCTAATAACAAAGGGGTTCTGACACT...ACAAAGGGGTTCTGACACTAAGACATTAGGGGAGAATGTTGGGTAGGCAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCAGTGTCAGAACCCCTTaGTTATTAGGGATAGTCACG +
Preference number: 5 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLSVRTP*LLGIVT
Trigger: CGTGACTATCCCTAATAACAAAGGGGTTCTGACACT...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp AGTCCACCAGGATTTCATCAGGATTTAGTGTCCACACAACCCCTAGCTGTTGGAAACTATTCATGGAGGTaGCCAGAGATGCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SPPGFHQDLVSTQPLAVGNYSWR*PEMQKE
Trigger: CTCCTTCTGCATCTCTGGCAACCTCCATGAATAGTT...TCCAACAGCTAGGGGTTGTGTGGACACTAAATCCTGATGAAATCCTGGTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485914.2
ENST00000648083.1
CDS-3UTR CAA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTGGTGGAGTTAGCCTCTaGTGGTACAGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: YISVILHIEIKIQTPGGPGGVSL*WYRSSQ
Trigger: CTGGGATGACCTGTACCACAAGAGGCTAACTCCACC...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS-3UTR CAA 90 bp ACAGCTTCCTGGGTGAACTCTGGGTCAAAATGCTTCAAGTCAGCAGGTCCTGTTGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: TASWVNSGSKCFKSAGPVVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...AACAGGACCTGCTGACTTGAAGCATTTTGACCCAGAGTTCACCCAGGAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS GCA 90 bp AGGAATCCAGCTCCGGAGTGTCTCATTCTAAAGTCCATTCATCTCTaGCTAGTATTCCATGTATGGTTCTCTCTCCAGGGTATAAGTTCG +
Preference number: 5 (lower is better)
Translates to: RNPAPECLILKSIHL*LVFHVWFSLQGISS
Trigger: CGAACTTATACCCTGGAGAGAGAACCATACATGGAATACTAGGCAGAGATGAATGGACTTTAGAATGAGACACTCCGGAGCTGGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS GCA 90 bp TATGTGCAGCATGGTGTGTACTGTGTGAGTGTTTTGTGCATAGAGTaGTTCCGTGTGTGTCTGTCTGTGGCTGTGTATTTCAGGTATTTG +
Preference number: 5 (lower is better)
Translates to: YVQHGVYCVSVLCIE*FRVCLSVAVYFRYL
Trigger: CAAATACCTGAAATACACAGCCACAGACAGACACACACGGAAGCACTCTATGCACAAAACACTCACACAGTACACACCATGCTGCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS-3UTR CAA 90 bp GTAGCAAACCTAACATTGGAAGCCATTTGTCAAGGTTGGCAGGGCAGAGATACAAGTGTCAGAACCCCTTaGTTATTAGGGATAGTCACG +
Preference number: 5 (lower is better)
Translates to: VANLTLEAICQGWQGRDTSVRTP*LLGIVT
Trigger: CGTGACTATCCCTAATAACAAAGGGGTTCTGACACT...TGTATCTCTGCCCTGCCAACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
ENST00000496343.6
CDS-3UTR CAA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTAGGCACAATCCTGACTaGTCAAGCAACCTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: YISVILHIEIKIQTPGGPRHNPD*SSNLPS
Trigger: ACTGGGAAGGTTGCTTGACAAGTCAGGATTGTGCCT...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373100.7
CDS-3UTR CAA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCCTTCCTGACCCAGTTTaGATCTCTAATAGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCLPDPV*ISNSSV
Trigger: CACTGAGCTATTAGAGATCAAAACTGGGTCAGGAAG...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CAA 90 bp GAGTCGCTCTTCCTAGCAGCTGAAGGTAATTCCTTACTAATACCAGCTGGCCTCCATCTTGTCCCAAATTaGTCAATTATCTGGCACTAT +
Preference number: 5 (lower is better)
Translates to: ESLFLAAEGNSLLIPAGLHLVPN*SIIWHY
Trigger: ATAGTGCCAGATAATTGACAAATTTGGGACAAGATG...GAGGCCAGCTGGTATTAGTAAGGAATTACCTTCAGCTGCTAGGAAGAGCGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS-3UTR CAA 90 bp GATGACCTGTCCTGCCAGTCCTGGACTCCGAAACATTATTTTTCTTTTATGTGCGACCTCTCCCTCATCTaGTCCCAAATTTGTCAATTA +
Preference number: 5 (lower is better)
Translates to: DDLSCQSWTPKHYFSFMCDLSLI*SQICQL
Trigger: TAATTGACAAATTTGGGACAAGATGAGGGAGAGGTC...GCACATAAAAGAAAAATAATGTTTCGGAGTCCAGGACTGGCAGGACAGGTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS GCA 90 bp ACTTCACAAACTGTAAAAGTCTCTGCAGCCAGAGTTATTTATTGGTaGTCAAGACAAAGGAGCAGCAACATGGCTGTTTATCCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TSQTVKVSAARVIYW*SRQRSSNMAVYPRA
Trigger: AGCTCTTGGATAAACAGCCATGTTGCTGCTCCTTTGTCTTGAGCACCAATAAATAACTCTGGCTGCAGAGACTTTTACAGTTTGTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 90 bp AGCACTTCACAAACTGTAAAAGTCTCTGCAGCCAGAGTTATTTATTaGTGCTCAAGACAAAGGAGCAGCAACATGGCTGTTTATCCAAGA +
Preference number: 5 (lower is better)
Translates to: STSQTVKVSAARVIY*CSRQRSSNMAVYPR
Trigger: TCTTGGATAAACAGCCATGTTGCTGCTCCTTTGTCTTGAGCACCAATAAATAACTCTGGCTGCAGAGACTTTTACAGTTTGTGAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS-3UTR CAA 90 bp TACATCTCTGTCATTTTACACATTGAGATCAAAATCCAAACACCAGGAGGCCCTGTAGCAAACCTAACATaGGAAGCCATTTGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: YISVILHIEIKIQTPGGPVANLT*EAICQG
Trigger: ACCTTGACAAATGGCTTCCAATGTTAGGTTTGCTAC...AGGGCCTCCTGGTGTTTGGATTTTGATCTCAATGTGTAAAATGACAGAGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341458.9
ENST00000373100.7
ENST00000423407.7
CDS CCA 90 bp TGTCTCATTCTAAAGTCCATTCATCTCTGCCTAGTATTCCATGTATaGTTCTCTCTCCAGGGTATAAGTTCGACATTATCTTCACTGTCT +
Preference number: 5 (lower is better)
Translates to: CLILKSIHLCLVFHV*FSLQGISSTLSSLS
Trigger: AGACAGTGAAGATAATGTCGAACTTATACCCTGGAGAGAGAACCATACATGGAATACTAGGCAGAGATGAATGGACTTTAGAATGAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS GCA 72 bp CCCAGCCGCTGCCTCTGGTCCTTGTGGAGAAGGCTTTaGAGGAGGTCACAGGCGGCCACTGTCCGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: PSRCLWSLWRRL*RRSQAATVRPP
Trigger: CGGAGGCCGGACAGTGGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000496343.6
ENST00000647716.1
ENST00000648530.1
CDS CAA 90 bp TGCTTTGGAGCCCAGCCGCTGCCTCTGGTCCTTGTGGAGAAGGCTTaGCAGGAGGTCACAGGCGGCCACTGTCCGGCCTCCGGGGATCTG +
Preference number: 6 (lower is better)
Translates to: CFGAQPLPLVLVEKA*QEVTGGHCPASGDL
Trigger: CAGATCCCCGGAGGCCGGACAGTGGCCGCCTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000496343.6
ENST00000647716.1
ENST00000648530.1
CDS CCA 72 bp GGCAGCTCTGAAAACTCCAGGTTCCTGCTCAGGTCCTaGGGAGCAGCCCCATGCACGGCTCTGCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSSENSRFLLRS*GAAPCTALPSS
Trigger: AGAAGAGGGCAGAGCCGTGCATGGGGCTGCTCCCCAGGACCTGAGCAGGAACCTGGAGTTTTCAGAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373077.5
ENST00000373100.7
ENST00000485914.2
ENST00000496343.6
ENST00000648083.1
ENST00000648530.1
CDS TCA 72 bp GAAGCCTCCCTGTGGGCCCACCCACCTCTCCCCCGTTaGCATAGTCGAGCACGAAGTAGAGCTTCTCAGGTG +
Preference number: 6 (lower is better)
Translates to: EASLWAHPPLPR*HSRARSRASQV
Trigger: CACCTGAGAAGCTCTACTTCGTGCTCGACTATGTCAACGGGGGAGAGGTGGGTGGGCCCACAGGGAGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617358.1
CDS CCA 72 bp TCTCACCCTGAAAACTCCAGGTTCCTGCTCAGGTCCTaGGGAGCAGCCCCATGCACGGCTCTGCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SHPENSRFLLRS*GAAPCTALPSS
Trigger: AGAAGAGGGCAGAGCCGTGCATGGGGCTGCTCCCCAGGACCTGAGCAGGAACCTGGAGTTTTCAGGGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647834.1
CDS CAA 72 bp TTTGGGTTGGCTGAAGGCCCCAGGTTGATGTTCCCATaGGCCCTGGAGGGCTGTGGACTTGGGGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: FGLAEGPRLMFP*ALEGCGLGVPA
Trigger: AGCTGGGACCCCAAGTCCACAGCCCTCCAGGGCCAATGGGAACATCAACCTGGGGCCTTCAGCCAACCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000412111.6
ENST00000423407.7
ENST00000426287.2
ENST00000485914.2
ENST00000496343.6
ENST00000617358.1
ENST00000648083.1
ENST00000648530.1
CDS CCA 72 bp GCAGAGCTTAAGATGGGACTGGAGACTTCTGTTCCCTaGGGAACACCATCTCACCCTAGCGGGGACGGTGGG +
Preference number: 6 (lower is better)
Translates to: AELKMGLETSVP*GTPSHPSGDGG
Trigger: CCCACCGTCCCCGCTAGGGTGAGATGGTGTTCCCCAGGGAACAGAAGTCTCCAGTCCCATCTTAAGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS CCA 72 bp TTCCCAGTCAGGAATGACCTGTCACCCACTCGCTCCTaGCTCCCAAACCGGCTCAAGTTCAACCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: FPVRNDLSPTRS*LPNRLKFNLPA
Trigger: GGCTGGGAGGTTGAACTTGAGCCGGTTTGGGAGCCAGGAGCGAGTGGGTGACAGGTCATTCCTGACTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647834.1
CDS GCA 72 bp GGGGTGCCGCACGTTCTTCAGAAGCACACTGCGCTCTaGCATGATGTGGCTCTGCTTCACTGCATAGAACGC +
Preference number: 6 (lower is better)
Translates to: GVPHVLQKHTAL*HDVALLHCIER
Trigger: GCGTTCTATGCAGTGAAGCAGAGCCACATCATGGCAGAGCGCAGTGTGCTTCTGAAGAACGTGCGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412111.6
CDS CCA 72 bp GCGGCCACTGTCCGGCCTCCGGGGATCTGTAGCGGCTaGTGCAGAATGTTCTCATACATCTGGGATACATCT +
Preference number: 6 (lower is better)
Translates to: AATVRPPGICSG*CRMFSYIWDTS
Trigger: AGATGTATCCCAGATGTATGAGAACATTCTGCACCAGCCGCTACAGATCCCCGGAGGCCGGACAGTGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000496343.6
ENST00000647716.1
ENST00000648530.1
CDS CCA 72 bp GCTACAAAGTCTGCTTTGGAGCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTTTGCAGGAGGTCACAG +
Preference number: 6 (lower is better)
Translates to: ATKSALEPSRCL*SLWRRLCRRSQ
Trigger: CTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCAGACTTTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS TCA 72 bp GCCGCACGTTCTTCAGAAGCACACTGCGCTCTGCCATaGTGTGGCTCTGCTTCACTGCATAGAACGCCCCAT +
Preference number: 6 (lower is better)
Translates to: AARSSEAHCALP*CGSASLHRTPH
Trigger: ATGGGGCGTTCTATGCAGTGAAGCAGAGCCACATCATGGCAGAGCGCAGTGTGCTTCTGAAGAACGTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412111.6
CDS GCA 72 bp TCTCAAGCTACAAAGTCTGCTTTGGAGCCCAGCCGCTaGCTCTGGTCCTTGTGGAGAAGGCTTTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SQATKSALEPSR*LWSLWRRLCRR
Trigger: CCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCAGACTTTGTAGCTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496343.6
CDS CCA 72 bp TCAAGAAAGTCTGCTTTGGAGCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCTTTGCAGGAGGTCACAG +
Preference number: 6 (lower is better)
Translates to: SRKSALEPSRCL*SLWRRLCRRSQ
Trigger: CTGTGACCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000647716.1
CDS CAA 72 bp GGCAGCCCTGGAGACCCTCAGGGCTTGTTAGACTGTTaGGGTCAGGGTATGTGCAGCATGGTGTGTACTGTG +
Preference number: 6 (lower is better)
Translates to: GSPGDPQGLLDC*GQGMCSMVCTV
Trigger: CACAGTACACACCATGCTGCACATACCCTGACCCAAACAGTCTAACAAGCCCTGAGGGTCTCCAGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS CCA 72 bp ACCCCTGTGAGCCAGGGTAGCTCCAGAAGTCCAAGATaGCCAGGGCTGGAAGGATCTTTTCAGGGCATAAAG +
Preference number: 6 (lower is better)
Translates to: TPVSQGSSRSPR*PGLEGSFQGIK
Trigger: CTTTATGCCCTGAAAAGATCCTTCCAGCCCTGGCCATCTTGGACTTCTGGAGCTACCCTGGCTCACAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS CCA 72 bp ATTTTTGCAAAGGCATTCAACTGGCTATCCGTGTCCTaGGAACGGAAGGCCCCGGGAGTACTCTCACAGGGC +
Preference number: 6 (lower is better)
Translates to: IFAKAFNWLSVS*ERKAPGVLSQG
Trigger: GCCCTGTGAGAGTACTCCCGGGGCCTTCCGTTCCCAGGACACGGATAGCCAGTTGAATGCCTTTGCAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 72 bp AAAGGCCTGCTTTCTGCAGGGCCCTTTGCCATGGGTTaGGGATGTAGAAGAGGTCAGCCAGGACTGCTTTGT +
Preference number: 6 (lower is better)
Translates to: KGLLSAGPFAMG*GCRRGQPGLLC
Trigger: ACAAAGCAGTCCTGGCTGACCTCTTCTACATCCCCAACCCATGGCAAAGGGCCCTGCAGAAAGCAGGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS GCA 72 bp TTAATCTCAAGAAAGTCTGCTTTGGAGCCCAGCCGCTaGCTCTGGTCCTTGTGGAGAAGGCTTTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LISRKSALEPSR*LWSLWRRLCRR
Trigger: CCTCCTGCAAAGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAAGCAGACTTTCTTGAGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000647716.1
CDS CAA 90 bp TCATGCATCAGTCATTCAGCAAAGGCCTGCTTTCTGCAGGGCCCTTaGCCATGGGTTGGGGATGTAGAAGAGGTCAGCCAGGACTGCTTT +
Preference number: 6 (lower is better)
Translates to: SCISHSAKACFLQGP*PWVGDVEEVSQDCF
Trigger: AAAGCAGTCCTGGCTGACCTCTTCTACATCCCCAACCCATGGCAAAGGGCCCTGCAGAAAGCAGGCCTTTGCTGAATGACTGATGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS TCA 72 bp TCCCCCAGCCCCGGAAATCCAGAGTCTAGAATGCTGTaGCCTCTTACCACATTTGGGTTGAAGGGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: SPSPGNPESRML*PLTTFGLKGGV
Trigger: AACTCCACCCTTCAACCCAAATGTGGTAAGAGGTCACAGCATTCTAGACTCTGGATTTCCGGGGCTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 72 bp GCAGAGCTTAAGATGGGACTGGAGACTTCTGTTCCCTaGGGAACACCATCTCACCCTGAAAACTCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: AELKMGLETSVP*GTPSHPENSRF
Trigger: GAACCTGGAGTTTTCAGGGTGAGATGGTGTTCCCCAGGGAACAGAAGTCTCCAGTCCCATCTTAAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647834.1
CDS CAA 72 bp CTGGTGCAGAATGTTCTCATACATCTGGGATACATCTaGGCTGTAGAAGGGCGGCAGGCCATGGAGCATCTC +
Preference number: 6 (lower is better)
Translates to: LVQNVLIHLGYI*AVEGRQAMEHL
Trigger: GAGATGCTCCATGGCCTGCCGCCCTTCTACAGCCAAGATGTATCCCAGATGTATGAGAACATTCTGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341458.9
ENST00000373077.5
ENST00000373100.7
ENST00000423407.7
ENST00000426287.2
ENST00000496343.6
ENST00000647716.1
ENST00000648530.1
CDS TCA 72 bp TCAGCAGGTCCTGTTGAAGACCTCACAAATGGTAGGTaGCAAAACCAGGAATCCAGCTCCGGAGTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: SAGPVEDLTNGR*QNQESSSGVSH
Trigger: ATGAGACACTCCGGAGCTGGATTCCTGGTTTTGTCACCTACCATTTGTGAGGTCTTCAACAGGACCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS CAA 72 bp GGGTATGTGCAGCATGGTGTGTACTGTGTGAGTGTTTaGTGCATAGAGTGCTTCCGTGTGTGTCTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: GYVQHGVYCVSV*CIECFRVCLSV
Trigger: CACAGACAGACACACACGGAAGCACTCTATGCACAAAACACTCACACAGTACACACCATGCTGCACATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS CAA 90 bp TTTGGGTCAGGGTATGTGCAGCATGGTGTGTACTGTGTGAGTGTTTaGTGCATAGAGTGCTTCCGTGTGTGTCTGTCTGTGGCTGTGTAT +
Preference number: 6 (lower is better)
Translates to: FGSGYVQHGVYCVSV*CIECFRVCLSVAVY
Trigger: ATACACAGCCACAGACAGACACACACGGAAGCACTCTATGCACAAAACACTCACACAGTACACACCATGCTGCACATACCCTGACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS TCA 72 bp CGAGGTAAGCAACCCCTGCATGGATGGAACAAGAAATaGTATCCCCTGGACCCAGACTTCCTAACAAACATC +
Preference number: 6 (lower is better)
Translates to: RGKQPLHGWNKK*YPLDPDFLTNI
Trigger: GATGTTTGTTAGGAAGTCTGGGTCCAGGGGATATCATTTCTTGTTCCATCCATGCAGGGGTTGCTTACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341458.9
CDS GCA 72 bp TATGTGCAGCATGGTGTGTACTGTGTGAGTGTTTTGTaGATAGAGTGCTTCCGTGTGTGTCTGTCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: YVQHGVYCVSVL*IECFRVCLSVA
Trigger: AGCCACAGACAGACACACACGGAAGCACTCTATGCACAAAACACTCACACAGTACACACCATGCTGCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617268.1
CDS GCA 72 bp CCATGGGTTGGGGATGTAGAAGAGGTCAGCCAGGACTaGTTTGTGCAATTTACATGGTGTGTACCACACAAA +
Preference number: 6 (lower is better)
Translates to: PWVGDVEEVSQD*FVQFTWCVPHK
Trigger: TTTGTGTGGTACACACCATGTAAATTGCACAAAGCAGTCCTGGCTGACCTCTTCTACATCCCCAACCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 72 bp GAAGAGGTCAGCCAGGACTGCTTTGTGCAATTTACATaGTGTGTACCACACAAAAGCACCAGCCAAAAGGGT +
Preference number: 6 (lower is better)
Translates to: EEVSQDCFVQFT*CVPHKSTSQKG
Trigger: ACCCTTTTGGCTGGTGCTTTTGTGTGGTACACACCATGTAAATTGCACAAAGCAGTCCTGGCTGACCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS GCA 72 bp GCTCCGGAGTGTCTCATTCTAAAGTCCATTCATCTCTaGCTAGTATTCCATGTATGGTTCTCTCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: APECLILKSIHL*LVFHVWFSLQG
Trigger: ACCCTGGAGAGAGAACCATACATGGAATACTAGGCAGAGATGAATGGACTTTAGAATGAGACACTCCGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373077.5
CDS CAA 90 bp GAGCACTTCACAAACTGTAAAAGTCTCTGCAGCCAGAGTTATTTATaGGTGCTCAAGACAAAGGAGCAGCAACATGGCTGTTTATCCAAG +
Preference number: 6 (lower is better)
Translates to: EHFTNCKSLCSQSYL*VLKTKEQQHGCLSK
Trigger: CTTGGATAAACAGCCATGTTGCTGCTCCTTTGTCTTGAGCACCAATAAATAACTCTGGCTGCAGAGACTTTTACAGTTTGTGAAGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS TCA 72 bp AGGTGCCAAGTACTGTTAGAAGGAAACACACTTATTTaGAATAAGTCGTTAAGCCTCAGTTGCCCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RCQVLLEGNTLI*NKSLSLSCPSC
Trigger: ACAGCTGGGGCAACTGAGGCTTAACGACTTATTTCAAATAAGTGTGTTTCCTTCTAACAGTACTTGGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647716.1
CDS CCA 72 bp CTAAAGTCCATTCATCTCTGCCTAGTATTCCATGTATaGTTCTCTCTCCAGGGTATAAGTTCGACATTATCT +
Preference number: 6 (lower is better)
Translates to: LKSIHLCLVFHV*FSLQGISSTLS
Trigger: AGATAATGTCGAACTTATACCCTGGAGAGAGAACCATACATGGAATACTAGGCAGAGATGAATGGACTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373077.5