RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SGCD (Homo sapiens)

Ensembl gene IDs: ENSG00000170624

Ensembl transcript IDs: ENST00000337851.9, ENST00000435422.7, ENST00000517913.5, ENST00000524347.2

Found 799 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTaGACGCCAGCAGCATCACTGGCCAGGCTAGGACCCACGCCGCTG +
Preference number: 1 (lower is better)
Translates to: LHEILNKSAWSESGV*TPAASLARLGPTPL
Trigger: CAGCGGCGTGGGTCCTAGCCTGGCCAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp GCACCTGGGGAAGGGTATGGCCCATTAATGATGGCTGCCAAGGTGTaGGGCCAAAGACATTACAGGACCAGAGTGGTCAGCTCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: APGEGYGPLMMAAKV*GQRHYRTRVVSSAL
Trigger: CAGAGCTGAGCTGACCACTCTGGTCCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCATCATTAATGGGCCATACCCTTCCCCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp GTGACCAGCCCAACTCTTCTGCATGAGATATTGAACAAGAGTGCTTaGAGTGAGTCTGGGGTCTGGACGCCAGCAGCATCACTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: VTSPTLLHEILNKSA*SESGVWTPAASLAR
Trigger: CCTGGCCAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATGCAGAAGAGTTGGGCTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp GGAGAATTCTGCACCTGGGGAAGGGTATGGCCCATTAATGATGGCTaGCAAGGTGTGAGGCCAAAGACATTACAGGACCAGAGTGGTCAG +
Preference number: 1 (lower is better)
Translates to: GEFCTWGRVWPINDG*QGVRPKTLQDQSGQ
Trigger: CTGACCACTCTGGTCCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCATCATTAATGGGCCATACCCTTCCCCAGGTGCAGAATTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TCCCATCCTCCCTGTTCCCAGGCATCCTCTGAGCCTGTGTTTCTCTaGCAGGTGGATCAATTACTTCCACATGTCTTGGAAGGCAGGCTT +
Preference number: 1 (lower is better)
Translates to: SHPPCSQASSEPVFL*QVDQLLPHVLEGRL
Trigger: AAGCCTGCCTTCCAAGACATGTGGAAGTAATTGATCCACCTGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAACAGGGAGGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp CAGAGGACCAGATATGTGTTGTGGAAAAAGCACATCAGAGAGGGATaGACCCCAACCTCTTTGCTGCTGTGGCCCTCTAAGCTCTGGGTG +
Preference number: 1 (lower is better)
Translates to: QRTRYVLWKKHIREG*TPTSLLLWPSKLWV
Trigger: CACCCAGAGCTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCCATCCCTCTCTGATGTGCTTTTTCCACAACACATATCTGGTCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp CTCCCTGTTCCCAGGCATCCTCTGAGCCTGTGTTTCTCTGGCAGGTaGATCAATTACTTCCACATGTCTTGGAAGGCAGGCTTTCCACAT +
Preference number: 1 (lower is better)
Translates to: LPVPRHPLSLCFSGR*INYFHMSWKAGFPH
Trigger: ATGTGGAAAGCCTGCCTTCCAAGACATGTGGAAGTAATTGATCCACCTGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAACAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp GAGGAGCTCTATCCACAATCCTGCCAGAGGACCAGATATGTGTTGTaGAAAAAGCACATCAGAGAGGGATGGACCCCAACCTCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: EELYPQSCQRTRYVL*KKHIREGWTPTSLL
Trigger: CAGCAAAGAGGTTGGGGTCCATCCCTCTCTGATGTGCTTTTTCCACAACACATATCTGGTCCTCTGGCAGGATTGTGGATAGAGCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp GCTAGGACCCACGCCGCTGTCCCCCACCATCTACTTCTAAGTAAGTaGCTAAGCAACACACAGCTTGCTTTTACATCCCATGTGTGCAAA +
Preference number: 1 (lower is better)
Translates to: ARTHAAVPHHLLLSK*LSNTQLAFTSHVCK
Trigger: TTTGCACACATGGGATGTAAAAGCAAGCTGTGTGTTGCTTAGTCACTTACTTAGAAGTAGATGGTGGGGGACAGCGGCGTGGGTCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp TGTGAGGCCAAAGACATTACAGGACCAGAGTGGTCAGCTCAGCTCTaGCATTGTATGCCTAATGCAGTCAGTGAGTCCCTGGTAGTTCTT +
Preference number: 1 (lower is better)
Translates to: CEAKDITGPEWSAQL*HCMPNAVSESLVVL
Trigger: AAGAACTACCAGGGACTCACTGACTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGTCTTTGGCCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TATGGGATAGGTGCTCCTAGTAGCCAAGGAGGGCGTTTCCTGGCTTaGAAAAACCCTGTATTGATACATACAGATTCTGGCAACATGGCC +
Preference number: 1 (lower is better)
Translates to: YGIGAPSSQGGRFLA*KNPVLIHTDSGNMA
Trigger: GGCCATGTTGCCAGAATCTGTATGTATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTTGGCTACTAGGAGCACCTATCCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp AATCACATTGCTTTTGAAAGTGCGAGCGTGTGTGGTGTGCTGTGCTaGCTGAAGCAGCAGGCTTCAGACTGCTTTATCTCTTATCAGTGG +
Preference number: 1 (lower is better)
Translates to: NHIAFESASVCGVLC*LKQQASDCFISYQW
Trigger: CCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTGCTTCAGCCAGCACAGCACACCACACACGCTCGCACTTTCAAAAGCAATGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp CCACAGGGTCCCCTACTTCACTCTCATTACACAATGATGCTGACCTaGAGAACCTGGTATGGTCTATCAATTAAGGGTCTTGGAGGATCA +
Preference number: 1 (lower is better)
Translates to: PQGPLLHSHYTMMLT*RTWYGLSIKGLGGS
Trigger: TGATCCTCCAAGACCCTTAATTGATAGACCATACCAGGTTCTGCAGGTCAGCATCATTGTGTAATGAGAGTGAAGTAGGGGACCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp AGAAATCACATTGCTTTTGAAAGTGCGAGCGTGTGTGGTGTGCTGTaGTGGCTGAAGCAGCAGGCTTCAGACTGCTTTATCTCTTATCAG +
Preference number: 1 (lower is better)
Translates to: RNHIAFESASVCGVL*WLKQQASDCFISYQ
Trigger: CTGATAAGAGATAAAGCAGTCTGAAGCCTGCTGCTTCAGCCAGCACAGCACACCACACACGCTCGCACTTTCAAAAGCAATGTGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TCAGTGTTTAATACGCTGTGTGATTCTGAATGGTCTGGGGAATGTTaGGACGGATGTGTGTTTAGATTTCTGTCACTCAGGTGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: SVFNTLCDSEWSGEC*DGCVFRFLSLRWWG
Trigger: TCCCCACCACCTGAGTGACAGAAATCTAAACACACATCCGTCCCAACATTCCCCAGACCATTCAGAATCACACAGCGTATTAAACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp GGGCTAAACAGACATGTTAAGTCAAAACTATTCTCTGGAGGACCATaGAATGGGCATCCCTCTAGACTATGGGAGGGTGAAGTGGAAAAC +
Preference number: 1 (lower is better)
Translates to: GLNRHVKSKLFSGGP*NGHPSRLWEGEVEN
Trigger: GTTTTCCACTTCACCCTCCCATAGTCTAGAGGGATGCCCATTCCATGGTCCTCCAGAGAATAGTTTTGACTTAACATGTCTGTTTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp ACAAATACTACTTCATTTAGGCTTGCAGGGCCACTACTTTCCAAATaGCATCCAGGACTGTCTAAGCCAGTGATGAGTTCATTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: TNTTSFRLAGPLLSK*HPGLSKPVMSSFWA
Trigger: AGCCCAGAATGAACTCATCACTGGCTTAGACAGTCCTGGATGCCATTTGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAGTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp CAAATGCCTATTTTTGATACAAAGGTCTCAGAGCTTGAGTGCGACTaGGATTCCCGCCATCACTCCCTCGTAATGACACTAAAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: QMPIFDTKVSELECD*DSRHHSLVMTLKEK
Trigger: CTTCTCTTTTAGTGTCATTACGAGGGAGTGATGGCGGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTTGTATCAAAAATAGGCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp GGTGATGATATTACTGCTTGCTGGGCTGAAGTTGAGGAGCAGCAGTaGGCACTGTTGTTGGAAGGTTTGAGACTGTTTATTGATGGATTT +
Preference number: 1 (lower is better)
Translates to: GDDITACWAEVEEQQ*ALLLEGLRLFIDGF
Trigger: AAATCCATCAATAAACAGTCTCAAACCTTCCAACAACAGTGCTCACTGCTGCTCCTCAACTTCAGCCCAGCAAGCAGTAATATCATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp GTTGTAAGAATTCAGAGTCTCCTTCTAGCTTTAGACCTTTTTCTGTaGTCCTCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTG +
Preference number: 1 (lower is better)
Translates to: VVRIQSLLLALDLFL*SSGFPFHPAAKWVL
Trigger: CAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGAGGATCACAGAAAAAGGTCTAAAGCTAGAAGGAGACTCTGAATTCTTACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524347.2
3UTR GCA 90 bp CTATGCAAATGTATCATTCCAGGAGCTGTTTCCTTATCCTTTTCATaGCTAAGATTTCTTGGGACAGGGGGAAGAGGGAGAACTGGTCTT +
Preference number: 1 (lower is better)
Translates to: LCKCIIPGAVSLSFS*LRFLGTGGRGRTGL
Trigger: AAGACCAGTTCTCCCTCTTCCCCCTGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGAAACAGCTCCTGGAATGATACATTTGCATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp GCTTCTTCAGAAGCGCATCTAGCCAGCATAATGATGGATAGCCTCTaGCTTTTCCTTCTAAAACACGACCTCCTTAAGAAGTATGTCTCA +
Preference number: 1 (lower is better)
Translates to: ASSEAHLASIMMDSL*LFLLKHDLLKKYVS
Trigger: TGAGACATACTTCTTAAGGAGGTCGTGTTTTAGAAGGAAAAGGCAGAGGCTATCCATCATTATGCTGGCTAGATGCGCTTCTGAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TCCAATACTTCCAATTATTTGTTGGTCTCACTAACTCTTCAAGCCTaGTGTGGCTGTAGGAACAGTAAGCACAGTGGCGGTGTTGATAAC +
Preference number: 1 (lower is better)
Translates to: SNTSNYLLVSLTLQA*CGCRNSKHSGGVDN
Trigger: GTTATCAACACCGCCACTGTGCTTACTGTTCCTACAGCCACACCAGGCTTGAAGAGTTAGTGAGACCAACAAATAATTGGAAGTATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATaGAACCTAATAGACCAGTTTGGAGTTTCTCGTTTTATGAAATCC +
Preference number: 1 (lower is better)
Translates to: SSSCPQTILWLQVFP*NLIDQFGVSRFMKS
Trigger: GGATTTCATAAAACGAGAAACTCCAAACTGGTCTATTAGGTTCCATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp CTAGTAGCCAAGGAGGGCGTTTCCTGGCTTGGAAAAACCCTGTATTaGTACATACAGATTCTGGCAACATGGCCCTATGGAATATTAATT +
Preference number: 1 (lower is better)
Translates to: LVAKEGVSWLGKTLY*YIQILATWPYGILI
Trigger: AATTAATATTCCATAGGGCCATGTTGCCAGAATCTGTATGTATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTTGGCTACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TGCTGGCTGAAGCAGCAGGCTTCAGACTGCTTTATCTCTTATCAGTaGTTTGGCTTTGTGCATGAGAAATTCAGAGGCAACTGTATAATT +
Preference number: 1 (lower is better)
Translates to: CWLKQQASDCFISYQ*FGFVHEKFRGNCII
Trigger: AATTATACAGTTGCCTCTGAATTTCTCATGCACAAAGCCAAACCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTGCTTCAGCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TTTCAAAATCTCCAAGCAAATGGGACTTCCATGACCTCACCATTTTaGTTAAGAACATCAGAATCCGGCTTCTTCAGAAGCGCATCTAGC +
Preference number: 1 (lower is better)
Translates to: FQNLQANGTSMTSPF*LRTSESGFFRSASS
Trigger: GCTAGATGCGCTTCTGAAGAAGCCGGATTCTGATGTTCTTAACCAAAATGGTGAGGTCATGGAAGTCCCATTTGCTTGGAGATTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 90 bp AGGAGAATCTGTGAGTTTGGAGGGAGCAAGATAGCAGAAGTTGGGTaGGCAGTTCAAAATTTGCTGAAATTCATCCTCCTCATTCATTCA +
Preference number: 1 (lower is better)
Translates to: RRICEFGGSKIAEVG*AVQNLLKFILLIHS
Trigger: TGAATGAATGAGGAGGATGAATTTCAGCAAATTTTGAACTGCTCACCCAACTTCTGCTATCTTGCTCCCTCCAAACTCACAGATTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp AGCAAAAGGGATCTTGACCAAAGGGATAAATGTCTGATAGGAACCTaGCTTACCACACACAAGCAGAGATGTCAGAATATGTCTTTTCAA +
Preference number: 1 (lower is better)
Translates to: SKRDLDQRDKCLIGT*LTTHKQRCQNMSFQ
Trigger: TTGAAAAGACATATTCTGACATCTCTGCTTGTGTGTGGTAAGGCAGGTTCCTATCAGACATTTATCCCTTTGGTCAAGATCCCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp CTTAGGATTAAATTTTGCATGTGGGATCACACCAGTCTCTTTTATTaGCATGAAACTTGTGGTGCTAATCTCATTCCTTCACGTGGTGAT +
Preference number: 1 (lower is better)
Translates to: LRIKFCMWDHTSLFY*HETCGANLIPSRGD
Trigger: ATCACCACGTGAAGGAATGAGATTAGCACCACAAGTTTCATGCCAATAAAAGAGACTGGTGTGATCCCACATGCAAAATTTAATCCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp AAACCTACACAGAAATGTAAGCTTACTCCCTGCTGTTTGGAAATGTaGTTTCTTTCCTGCTATATCCAATGCATACCACAAAAACCTCTA +
Preference number: 1 (lower is better)
Translates to: KPTQKCKLTPCCLEM*FLSCYIQCIPQKPL
Trigger: TAGAGGTTTTTGTGGTATGCATTGGATATAGCAGGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACATTTCTGTGTAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TATTCTGTTTGTGATCTCACTACCCTTAGGATTAAATTTTGCATGTaGGATCACACCAGTCTCTTTTATTGGCATGAAACTTGTGGTGCT +
Preference number: 1 (lower is better)
Translates to: YSVCDLTTLRIKFCM*DHTSLFYWHETCGA
Trigger: AGCACCACAAGTTTCATGCCAATAAAAGAGACTGGTGTGATCCCACATGCAAAATTTAATCCTAAGGGTAGTGAGATCACAAACAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp ATATTCCCAAACCTACACAGAAATGTAAGCTTACTCCCTGCTGTTTaGAAATGTGCTTTCTTTCCTGCTATATCCAATGCATACCACAAA +
Preference number: 1 (lower is better)
Translates to: IFPNLHRNVSLLPAV*KCAFFPAISNAYHK
Trigger: TTTGTGGTATGCATTGGATATAGCAGGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACATTTCTGTGTAGGTTTGGGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TTGACCTTTCATAGAGCCTTGAAAAATCAGTATCAGGTGCTGGAATaGATCTATTTACCTTTTTGGTCCAAACTTCATACTACCTTTGGC +
Preference number: 1 (lower is better)
Translates to: LTFHRALKNQYQVLE*IYLPFWSKLHTTFG
Trigger: GCCAAAGGTAGTATGAAGTTTGGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGCTCTATGAAAGGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp AGTAACTATATTCCCAAACCTACACAGAAATGTAAGCTTACTCCCTaGTGTTTGGAAATGTGCTTTCTTTCCTGCTATATCCAATGCATA +
Preference number: 1 (lower is better)
Translates to: SNYIPKPTQKCKLTP*CLEMCFLSCYIQCI
Trigger: TATGCATTGGATATAGCAGGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACATTTCTGTGTAGGTTTGGGAATATAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 90 bp GTTTCTTATATTATAACTTTTTCCCAACCTGCTACTAGGGCACTATaGAAATGTATCATTCCAGGAGCTGTTTCCTTATCCTTTTCATGC +
Preference number: 1 (lower is better)
Translates to: VSYIITFSQPATRAL*KCIIPGAVSLSFSC
Trigger: GCATGAAAAGGATAAGGAAACAGCTCCTGGAATGATACATTTGCATAGTGCCCTAGTAGCAGGTTGGGAAAAAGTTATAATATAAGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp CATAAAGACACTCAGTTTGTATTATCTTTCAGTGCACAATTCTGGTaGCATGTAGTGCTTCTTAGAGAAAACACAATAGTGGCTTTAGGA +
Preference number: 1 (lower is better)
Translates to: HKDTQFVLSFSAQFW*HVVLLRENTIVALG
Trigger: TCCTAAAGCCACTATTGTGTTTTCTCTAAGAAGCACTACATGCCACCAGAATTGTGCACTGAAAGATAATACAAACTGAGTGTCTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 90 bp TCTCATAAAGACACTCAGTTTGTATTATCTTTCAGTGCACAATTCTaGTGGCATGTAGTGCTTCTTAGAGAAAACACAATAGTGGCTTTA +
Preference number: 1 (lower is better)
Translates to: SHKDTQFVLSFSAQF*WHVVLLRENTIVAL
Trigger: TAAAGCCACTATTGTGTTTTCTCTAAGAAGCACTACATGCCACCAGAATTGTGCACTGAAAGATAATACAAACTGAGTGTCTTTATGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCAGGGAAGCAGGTACTaGTGGGCCTCAGGGGACACA +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQQGSRY*WASGDT
Trigger: TGTGTCCCCTGAGGCCCAGCAGTACCTGCTTCCCTG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGCGGGAATGAGGTGCTaGTTCCACATACAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: HEILNKSAWSESGVWTPAAGMRC*FHIQGS
Trigger: GCTTCCCTGTATGTGGAAGCAGCACCTCATTCCCGC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGTGTGCTGTGCTGGCTaGAGCAGCAGGCTTCAGACT +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQVCCAG*SSRLQT
Trigger: AGTCTGAAGCCTGCTGCTTCAGCCAGCACAGCACAC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTGTGCTGTGCTGGCTaGAGCAGCAGGCTTCAGACT +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVCCAG*SSRLQT
Trigger: AGTCTGAAGCCTGCTGCTTCAGCCAGCACAGCACAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATGGCGGGAATGAGGTaGTGCTTCCACATACAGGGA +
Preference number: 2 (lower is better)
Translates to: HEILNKSAWSESGVWTPAMAGMR*CFHIQG
Trigger: TCCCTGTATGTGGAAGCAGCACCTCATTCCCGCCAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAGTGAGTCTGGGGTCTaGACGCCAGCAGCATCACTG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSESGV*TPAASL
Trigger: CAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp CTTGCTGAGTGCATTGACTTAAGGCATAGGCACATTTCCCCCTCTTaGAACAGAGATGGTGTAATCCCCTGTCCCAGCACAAGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LAECIDLRHRHISPS*NRDGVIPCPSTRAG
Trigger: GCCAGCTCTTGTGCTGGGACAGGGGATTACACCATCTCTGTTCAAAGAGGGGGAAATGTGCCTATGCCTTAAGTCAATGCACTCAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp GGTGAGGAGCTCTATCCACAATCCTGCCAGAGGACCAGATATGTGTaGTGGAAAAAGCACATCAGAGAGGGATGGACCCCAACCTCTTTG +
Preference number: 2 (lower is better)
Translates to: GEELYPQSCQRTRYV*WKKHIREGWTPTSL
Trigger: CAAAGAGGTTGGGGTCCATCCCTCTCTGATGTGCTTTTTCCACAACACATATCTGGTCCTCTGGCAGGATTGTGGATAGAGCTCCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGATGGGATGGAAAATaGCAGTGGATATCGCAGGGT +
Preference number: 2 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGWDGK*QWISQG
Trigger: ACCCTGCGATATCCACTGTCATTTTCCATCCCATCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAAAGGTCTCAGAGCTTaGGTGCGACTGAGATTCCCG +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQKGLRA*VRLRFP
Trigger: CGGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTTGAGGAGCAGCAGTaGGCACTGTTGTTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVEEQQ*ALLLEG
Trigger: ACCTTCCAACAACAGTGCTCACTGCTGCTCCTCAAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTTCCAGGCTTCTTTTaGGGTAGGAGTTCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: HEILNKSAWSESGVWTPALPGFF*GRSSAL
Trigger: AAGAGCAGAACTCCTACCCCAAAAGAAGCCTGGAAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTGAACAAGAGTGCTTaGAGTGAGTCTGGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLNKSA*SESGVW
Trigger: CCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTTGGAACCCCACTCTaGCTTCCTACTGCAACAGGT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFGTPL*LPTATG
Trigger: ACCTGTTGCAGTAGGAAGCCAGAGTGGGGTTCCAAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTGAATTCCTACGGCTaGCTTCTACAGCATTGCCAG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLNSYG*LLQHCQ
Trigger: CTGGCAATGCTGTAGAAGTCAGCCGTAGGAATTCAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGTGCAAATCTCAGCCTaGTGCTTGAGTGTCATCTCA +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMVQISA*CLSVIS
Trigger: TGAGATGACACTCAAGCATCAGGCTGAGATTTGCAC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGGGATACATAGTCTCTaGCACAACTACTCCATCCTG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMGIHSL*HNYSIL
Trigger: CAGGATGGAGTAGTTGTGTCAGAGACTATGTATCCC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCCTTCCTCCCCACCATaGTACTCATACTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQPSSPP*YSYFQS
Trigger: ACTCTGGAAGTATGAGTATCATGGTGGGGAGGAAGG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTGTCTGATAGGAACCTaGCTTACCACACACAAGCAG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMCLIGT*LTTHKQ
Trigger: CTGCTTGTGTGTGGTAAGGCAGGTTCCTATCAGACA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCTCTTTGAACAGAGATaGTGTAATCCCCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLFEQR*CNPLSQ
Trigger: CTGGGACAGGGGATTACACCATCTCTGTTCAAAGAG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACAGTGAGTCTGGGGTCTaGACGCCAGCAGCATCACTG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSESGV*TPAASL
Trigger: CAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp GAGCCTGTGTTTCTCTGGCAGGTGGATCAATTACTTCCACATGTCTaGGAAGGCAGGCTTTCCACATGTAACATAAGGAAGGGCTTCCTT +
Preference number: 2 (lower is better)
Translates to: EPVFLWQVDQLLPHV*EGRLSTCNIRKGFL
Trigger: AAGGAAGCCCTTCCTTATGTTACATGTGGAAAGCCTGCCTTCCAAGACATGTGGAAGTAATTGATCCACCTGCCAGAGAAACACAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGAGCTTGAGTGCGACTaGGATTCCCGCCATCACTCC +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEELECD*DSRHHS
Trigger: GGAGTGATGGCGGGAATCTCAGTCGCACTCAAGCTC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATAGCAGAAGTTGGGTaGGCAGTTCAAAATTTGCTG +
Preference number: 2 (lower is better)
Translates to: HEILNKSAWSESGVWTPAIAEVG*AVQNLL
Trigger: CAGCAAATTTTGAACTGCTCACCCAACTTCTGCTAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCCCAACTCTTCTGCATaGGATATTGAACAAGAGTGC +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMPNSSA*DIEQEC
Trigger: GCACTCTTGTTCAATATCTCATGCAGAAGAGTTGGG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAAATCACATTGCTTTTaGAAGTGCGAGCGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMKSHCF*KCERVW
Trigger: CCACACACGCTCGCACTTTCAAAAGCAATGTGATTT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCATTCAAACCTGCCTTaGGAAATTTCAGGGACTCCC +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLHSNLP*EISGTP
Trigger: GGGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGAAGCCATTGGAAAGTaGGGGACTATTAGACAACTC +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMEAIGK*GTIRQL
Trigger: GAGTTGTCTAATAGTCCCTCACTTTCCAATGGCTTC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAAAAAGGCCTTTATGCTaGCAACAATGTCCACTATGG +
Preference number: 2 (lower is better)
Translates to: HEILNKSAWSESGVWTPAKRPLC*QQCPLW
Trigger: CCATAGTGGACATTGTTGGCAGCATAAAGGCCTTTT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCTTCCAGGCTTCTTTTaGGGTAGGAGTTCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLPGFF*GRSSAL
Trigger: AAGAGCAGAACTCCTACCCCAAAAGAAGCCTGGAAG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCTCTTTGAACAGAGATaGTGTAATCCCCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLFEQR*CNPLSQ
Trigger: CTGGGACAGGGGATTACACCATCTCTGTTCAAAGAG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGGGCGTTTCCTGGCTTaGAAAAACCCTGTATTGATA +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMGRFLA*KNPVLI
Trigger: TATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCATCCCTCTAGACTATaGGAGGGTGAAGTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLHPSRL*EGEVEN
Trigger: GTTTTCCACTTCACCCTCCCATAGTCTAGAGGGATG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCCTCAGACAATCCTTTaGCTACAAGTGTTCCCATGG +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQPQTIL*LQVFPW
Trigger: CCATGGGAACACTTGTAGCCAAAGGATTGTCTGAGG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp AAATCCAAATGCCACCCAGGCCTACAAATACTACTTCATTTAGGCTaGCAGGGCCACTACTTTCCAAATGGCATCCAGGACTGTCTAAGC +
Preference number: 2 (lower is better)
Translates to: KSKCHPGLQILLHLG*QGHYFPNGIQDCLS
Trigger: GCTTAGACAGTCCTGGATGCCATTTGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAGTATTTGTAGGCCTGGGTGGCATTTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp TTCACTCACTTACTAGTGAGGCTGTCCACATACTTAATGAGGCATTaGGAACCCCACTCTGGCTTCCTACTGCAACAGGTGGATTTAGAC +
Preference number: 2 (lower is better)
Translates to: FTHLLVRLSTYLMRH*EPHSGFLLQQVDLD
Trigger: GTCTAAATCCACCTGTTGCAGTAGGAAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGTAAGTGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp TCTTCCTTGTTGACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTaGGCTACAAGTGTTCCCATGGAACCTAATAGACCAGTTTGGAGT +
Preference number: 2 (lower is better)
Translates to: SSLLTSVVFLPSDNP*ATSVPMEPNRPVWS
Trigger: ACTCCAAACTGGTCTATTAGGTTCCATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGTCAACAAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTCTGCATGAGATATTaGACAAGAGTGCTTGGAGTG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFCMRY*TRVLGV
Trigger: CACTCCAAGCACTCTTGTTCAATATCTCATGCAGAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCCCAACTCTTCTGCATaGGATATTGAACAAGAGTGC +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQPNSSA*DIEQEC
Trigger: GCACTCTTGTTCAATATCTCATGCAGAAGAGTTGGG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTTTGGCTTTGTGCATaGGAAATTCAGAGGCAACTG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVWLCA*EIQRQL
Trigger: CAGTTGCCTCTGAATTTCTCATGCACAAAGCCAAAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACATGGCGGGAATGAGGTaGTGCTTCCACATACAGGGA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNMAGMR*CFHIQG
Trigger: TCCCTGTATGTGGAAGCAGCACCTCATTCCCGCCAT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCAGCAGGCTTCAGACTaGTTTATCTCTTATCAGTGG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLQQASD*FISYQW
Trigger: CCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGATGATATTACTGCTTaGTGGGCTGAAGTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQDDITA*WAEVEE
Trigger: CTCCTCAACTTCAGCCCAGCAAGCAGTAATATCATC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGATGATATTACTGCTTaGTGGGCTGAAGTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLDDITA*WAEVEE
Trigger: CTCCTCAACTTCAGCCCAGCAAGCAGTAATATCATC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCCACTACTTTCCAAATaGCATCCAGGACTGTCTAAG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLPLLSK*HPGLSK
Trigger: CTTAGACAGTCCTGGATGCCATTTGGAAAGTAGTGG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGGGCGTTTCCTGGCTTaGAAAAACCCTGTATTGATA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLGRFLA*KNPVLI
Trigger: TATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTACTTCCACATGTCTTaGAAGGCAGGCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLYFHMS*KAGFPH
Trigger: ATGTGGAAAGCCTGCCTTCCAAGACATGTGGAAGTA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp ACACACTCAAGCACGCACACACACGTACACATACACACAAGGTCTTaGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGGCAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: THSSTHTHVHIHTRS*IGFLCSSKNSWQPV
Trigger: CACTGGCTGCCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGACCTTGTGTGTATGTGTACGTGTGTGTGCGTGCTTGAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp TTTGAATTCCTACGGCTGACTTCTACAGCATTGCCAGTTCCTAGCTaGAAGAGGGGGAAGTTAGCCAGCCTTACTAAAGCTAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: FEFLRLTSTALPVPS*KRGKLASLTKAKTG
Trigger: TCCTGTTTTAGCTTTAGTAAGGCTGGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAATGCTGTAGAAGTCAGCCGTAGGAATTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTAGGCCAGCCATTTTaGATTCCTACGGCTGACTTC +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVGQPF*IPTADF
Trigger: GAAGTCAGCCGTAGGAATTCAAAATGGCTGGCCTAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATAGCAGAAGTTGGGTaGGCAGTTCAAAATTTGCTG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLIAEVG*AVQNLL
Trigger: CAGCAAATTTTGAACTGCTCACCCAACTTCTGCTAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCTTCCTCCCCACCATaGTACTCATACTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPSSPP*YSYFQS
Trigger: ACTCTGGAAGTATGAGTATCATGGTGGGGAGGAAGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTCAGGGACTCCCTTATaGAGAAAGCTTTTAAGAACC +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSGTPL*RKLLRT
Trigger: GGTTCTTAAAAGCTTTCTTCATAAGGGAGTCCCTGA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTGTAAGCTTACTCCCTaGTGTTTGGAAATGTGCTTT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMCKLTP*CLEMCF
Trigger: AAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGCTACTAGGGCACTATaGAAATGTATCATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLATRAL*KCIIPG
Trigger: TCCTGGAATGATACATTTGCATAGTGCCCTAGTAGC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTCTAGTAAAAATAGCTaGCAGCCAGTGTCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSSKNS*QPVSKA
Trigger: GGCTTTAGACACTGGCTGCCAGCTATTTTTACTAGA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAGTGCACAATTCTGGTaGCATGTAGTGCTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSAQFW*HVVLLR
Trigger: TCTAAGAAGCACTACATGCCACCAGAATTGTGCACT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTCAGTGCACAATTCTaGTGGCATGTAGTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFSAQF*WHVVLL
Trigger: AAGAAGCACTACATGCCACCAGAATTGTGCACTGAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGGAAGCAGGTACTGCTaGGCCTCAGGGGACACAGTG +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKGSRYC*ASGDTV
Trigger: CACTGTGTCCCCTGAGGCCCAGCAGTACCTGCTTCC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTGTTTCTCTGGCAGGTaGATCAATTACTTCCACATG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLCFSGR*INYFHM
Trigger: CATGTGGAAGTAATTGATCCACCTGCCAGAGAAACA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTGACCTGCAGAACCTaGTATGGTCTATCAATTAAG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLTCRT*YGLSIK
Trigger: CTTAATTGATAGACCATACCAGGTTCTGCAGGTCAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTCTCTGGAGGACCATaGAATGGGCATCCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFSGGP*NGHPSR
Trigger: TCTAGAGGGATGCCCATTCCATGGTCCTCCAGAGAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp CCTAGTAGCCAAGGAGGGCGTTTCCTGGCTTGGAAAAACCCTGTATaGATACATACAGATTCTGGCAACATGGCCCTATGGAATATTAAT +
Preference number: 2 (lower is better)
Translates to: PSSQGGRFLAWKNPV*IHTDSGNMALWNIN
Trigger: ATTAATATTCCATAGGGCCATGTTGCCAGAATCTGTATGTATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTTGGCTACTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGGATGGGATGGAAAATaGCAGTGGATATCGCAGGGT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEGWDGK*QWISQG
Trigger: ACCCTGCGATATCCACTGTCATTTTCCATCCCATCC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTGAATTCCTACGGCTaGCTTCTACAGCATTGCCAG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLNSYG*LLQHCQ
Trigger: CTGGCAATGCTGTAGAAGTCAGCCGTAGGAATTCAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTAGGCCAGCCATTTTaGATTCCTACGGCTGACTTC +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVGQPF*IPTADF
Trigger: GAAGTCAGCCGTAGGAATTCAAAATGGCTGGCCTAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCTATCATTGTTTATCTaGATGATATGGGATAGGTGC +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLSLFI*MIWDRC
Trigger: GCACCTATCCCATATCATTCAGATAAACAATGATAG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCATTCCTTCACGTGGTaGTTAGAACAAAATCTAAGC +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQHSFTW*LEQNLS
Trigger: GCTTAGATTTTGTTCTAATCACCACGTGAAGGAATG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTCCCAAGACTTCTATaGCTTCTTGAGCAGATATCA +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFPRLL*LLEQIS
Trigger: TGATATCTGCTCAAGAAGTCATAGAAGTCTTGGGAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGGGATACATAGTCTCTaGCACAACTACTCCATCCTG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNGIHSL*HNYSIL
Trigger: CAGGATGGAGTAGTTGTGTCAGAGACTATGTATCCC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGAAGGGCTTCCTTCCTaGAAGACTTTGCCAAGTAAC +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNEGLPS*KTLPSN
Trigger: GTTACTTGGCAAAGTCTTTCAGGAAGGAAGCCCTTC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTCTACACCAGAGAATaGAGACCCAGATTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFYTRE*RPRFLE
Trigger: TTCTAAGAATCTGGGTCTTCATTCTCTGGTGTAGAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTGTTGTTGGAAGGTTTaGGACTGTTTATTGATGGAT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMCCWKV*DCLLMD
Trigger: ATCCATCAATAAACAGTCTCAAACCTTCCAACAACA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCACTGTCTTCCTTGTTaGCAAGTGTCGTCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEHCLPC*QVSSSC
Trigger: GCAGGAAGACGACACTTGTCAACAAGGAAGACAGTG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTGTATTATCTTTCAGTaGACAATTCTGGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMCIIFQ*TILVAC
Trigger: ACATGCCACCAGAATTGTGCACTGAAAGATAATACA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAAGATAAATAAGATGTaGTTCTCCTTGCTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMKINKM*FSLLSA
Trigger: TGCACTCAGCAAGGAGAAGCACATCTTATTTATCTT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAAAGAAAAATCCAAATaGCACCCAGGCCTACAAATA +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMKEKSK*HPGLQI
Trigger: TATTTGTAGGCCTGGGTGGCATTTGGATTTTTCTTT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTACTACTCCATCCTGCTaGTGTAGTGTAAAATCAGAA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLTTPSC*CSVKSE
Trigger: TTCTGATTTTACACTACAGCAGCAGGATGGAGTAGT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTCCTGCTATATCCAATaGATACCACAAAAACCTCTA +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSCYIQ*IPQKPL
Trigger: TAGAGGTTTTTGTGGTATGCATTGGATATAGCAGGA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGTCTGATAGGAACCTaGCTTACCACACACAAGCAG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNCLIGT*LTTHKQ
Trigger: CTGCTTGTGTGTGGTAAGGCAGGTTCCTATCAGACA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTGGTGGGGATGGGATaGAAAATGACAGTGGATATC +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVVGMG*KMTVDI
Trigger: GATATCCACTGTCATTTTCCATCCCATCCCCACCAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTTCTGTCACTCAGGTaGTGGGGATGGGATGGAAAA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFLSLR*WGWDGK
Trigger: TTTTCCATCCCATCCCCACCACCTGAGTGACAGAAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGGTCTGGGGAATGTTaGGACGGATGTGTGTTTAGA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNWSGEC*DGCVFR
Trigger: TCTAAACACACATCCGTCCCAACATTCCCCAGACCA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCAAGATAGCAGAAGTTaGGTGAGCAGTTCAAAATTT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMQDSRS*VSSSKF
Trigger: AAATTTTGAACTGCTCACCCAACTTCTGCTATCTTG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTGAACAAGAGTGCTTaGAGTGAGTCTGGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELNKSA*SESGVW
Trigger: CCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTGGTAAGTCAGATTTaGTTTCCAGGTCATAGTTTG +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVVSQI*FPGHSL
Trigger: CAAACTATGACCTGGAAACCAAATCTGACTTACCAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTCTCTGGAGGACCATaGAATGGGCATCCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFSGGP*NGHPSR
Trigger: TCTAGAGGGATGCCCATTCCATGGTCCTCCAGAGAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGGGAAGAGGGAGAACTaGTCTTGTTTAATGAAATTT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMGKREN*SCLMKF
Trigger: AAATTTCATTAAACAAGACCAGTTCTCCCTCTTCCC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTTATCTCTTATCAGTaGTTTGGCTTTGTGCATGAG +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFISYQ*FGFVHE
Trigger: CTCATGCACAAAGCCAAACCACTGATAAGAGATAAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGATATTACTGCTTGCTaGGCTGAAGTTGAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNDITAC*AEVEEQ
Trigger: CTGCTCCTCAACTTCAGCCCAGCAAGCAGTAATATC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGCTTCTCGATTACAGTaGCTGTTTCTTTGTTCTATT +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMASRLQ*LFLCSI
Trigger: AATAGAACAAAGAAACAGCCACTGTAATCGAGAAGC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTTGGAACCCCACTCTaGCTTCCTACTGCAACAGGT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFGTPL*LPTATG
Trigger: ACCTGTTGCAGTAGGAAGCCAGAGTGGGGTTCCAAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTCTAGGCATGTGGGGTaGATTTTAAATCAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSRHVG*ILNQAD
Trigger: ATCTGCTTGATTTAAAATCCACCCCACATGCCTAGA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCTCAGACAATCCTTTaGCTACAAGTGTTCCCATGG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPQTIL*LQVFPW
Trigger: CCATGGGAACACTTGTAGCCAAAGGATTGTCTGAGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTGCAAATCTCAGCCTaGTGCTTGAGTGTCATCTCA +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVQISA*CLSVIS
Trigger: TGAGATGACACTCAAGCATCAGGCTGAGATTTGCAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCTATCTAGCCACAAATaGCTTTGTAGCTATCATTGT +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLSSHK*LCSYHC
Trigger: ACAATGATAGCTACAAAGTCATTTGTGGCTAGATAG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTCCCAGGCATCCTCTaGGCCTGTGTTTCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKFPGIL*ACVSLA
Trigger: TGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCATTCAAACCTGCCTTaGGAAATTTCAGGGACTCCC +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEHSNLP*EISGTP
Trigger: GGGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGTAGAAGTAGGATGTaGAGCCATTGGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNCRSRM*SHWKVR
Trigger: CCTCACTTTCCAATGGCTTCACATCCTACTTCTACA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTGTATTATCTTTCAGTaGACAATTCTGGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLCIIFQ*TILVAC
Trigger: ACATGCCACCAGAATTGTGCACTGAAAGATAATACA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGCGGGAATGAGGTGCTaGTTCCACATACAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKAGMRC*FHIQGS
Trigger: GCTTCCCTGTATGTGGAAGCAGCACCTCATTCCCGC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTCCTGCTATATCCAATaGATACCACAAAAACCTCTA +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSCYIQ*IPQKPL
Trigger: TAGAGGTTTTTGTGGTATGCATTGGATATAGCAGGA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTCCTTATCCTTTTCATaGCTAAGATTTCTTGGGACA +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSLSFS*LRFLGT
Trigger: TGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTCCTTATCCTTTTCATaGCTAAGATTTCTTGGGACA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSLSFS*LRFLGT
Trigger: TGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTGTGTGATTCTGAATaGTCTGGGGAATGTTGGGAC +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLCDSE*SGECWD
Trigger: GTCCCAACATTCCCCAGACCATTCAGAATCACACAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCACTACTTTCCAAATaGCATCCAGGACTGTCTAAG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPLLSK*HPGLSK
Trigger: CTTAGACAGTCCTGGATGCCATTTGGAAAGTAGTGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAAGGAGGGCGTTTCCTaGCTTGGAAAAACCCTGTAT +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSKEGVS*LGKTLY
Trigger: ATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTAACTCTTCAAGCCTaGTGTGGCTGTAGGAACAGT +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLTLQA*CGCRNS
Trigger: ACTGTTCCTACAGCCACACCAGGCTTGAAGAGTTAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGAAATAAAGCCAAACTaGCATTCATCTGGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQEIKPN*HSSGFS
Trigger: TGAGAAACCAGATGAATGCCAGTTTGGCTTTATTTC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTATCAGGTGCTGGAATaGATCTATTTACCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQYQVLE*IYLPFW
Trigger: CCAAAAAGGTAAATAGATCCATTCCAGCACCTGATA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTTATCTCTTATCAGTaGTTTGGCTTTGTGCATGAG +
Preference number: 2 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFISYQ*FGFVHE
Trigger: CTCATGCACAAAGCCAAACCACTGATAAGAGATAAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCCTAATAGACCAGTTTaGAGTTTCTCGTTTTATGAA +
Preference number: 2 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMPNRPV*SFSFYE
Trigger: TTCATAAAACGAGAAACTCCAAACTGGTCTATTAGG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACATAAAGGGCATGTTTTaGCATTTCCCACCAATCCCA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNIKGMF*HFPPIP
Trigger: TGGGATTGGTGGGAAATGTCAAAACATGCCCTTTAT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTCCAAATAAAAGGCTaGGGGATTCCCTTAAGTGAC +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFQIKG*GIPLSD
Trigger: GTCACTTAAGGGAATCCCTCAGCCTTTTATTTGGAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTCAGGGACTCCCTTATaGAGAAAGCTTTTAAGAACC +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSGTPL*RKLLRT
Trigger: GGTTCTTAAAAGCTTTCTTCATAAGGGAGTCCCTGA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGCTACTAGGGCACTATaGAAATGTATCATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNATRAL*KCIIPG
Trigger: TCCTGGAATGATACATTTGCATAGTGCCCTAGTAGC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACAGCTCTGACATTGTATaGCTAATGCAGTCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSSDIV*LMQSVS
Trigger: ACTCACTGACTGCATTAGGCATACAATGTCAGAGCT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTGGGTTGAAATCTTTTaGTTAAAGTCAGAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLWVEIF*LKSEVR
Trigger: TCTCACTTCTGACTTTAACCAAAAGATTTCAACCCA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCATCTGCCAGCCATTTaGCTTGTCTATCAGCTTTTA +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNHLPAI*LVYQLL
Trigger: TAAAAGCTGATAGACAAGCCAAATGGCTGGCAGATG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATTAAATTTTGCATGTaGGATCACACCAGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLIKFCM*DHTSLF
Trigger: AAAGAGACTGGTGTGATCCCACATGCAAAATTTAAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTACTTCCACATGTCTTaGAAGGCAGGCTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEYFHMS*KAGFPH
Trigger: ATGTGGAAAGCCTGCCTTCCAAGACATGTGGAAGTA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGAGCCTGTGTTTCTCTaGCAGGTGGATCAATTACTT +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSEPVFL*QVDQLL
Trigger: AAGTAATTGATCCACCTGCCAGAGAAACACAGGCTC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGAGCCTGTGTTTCTCTaGCAGGTGGATCAATTACTT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEEPVFL*QVDQLL
Trigger: AAGTAATTGATCCACCTGCCAGAGAAACACAGGCTC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTCAAAACTATTCTCTaGAGGACCATGGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVKTIL*RTMEWA
Trigger: TGCCCATTCCATGGTCCTCCAGAGAATAGTTTTGAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTCAAAACTATTCTCTaGAGGACCATGGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVKTIL*RTMEWA
Trigger: TGCCCATTCCATGGTCCTCCAGAGAATAGTTTTGAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTAGGGTCTGGTAAATaGGGGTCATTTACATTTAAA +
Preference number: 2 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLGSGK*GSFTFK
Trigger: TTTAAATGTAAATGACCCCCATTTACCAGACCCTAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp CATAGTTTGCCCACCTCTGCTCTAGGGTCAAACCTTAAGCAAACTTaGGTCTATAGTTGCTGGATATGCGATGAAAATTATCCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: HSLPTSALGSNLKQT*VYSCWICDENYPKR
Trigger: TCTCTTTGGATAATTTTCATCGCATATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTTTGACCCTAGAGCAGAGGTGGGCAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp AACAATACTCAAAAGGAGGACCTCCCACAAGTAATTATTTTCCCTTaGCCATTCAAACCTGCCTTGAGAAATTTCAGGGACTCCCTTATG +
Preference number: 2 (lower is better)
Translates to: NNTQKEDLPQVIIFP*PFKPALRNFRDSLM
Trigger: CATAAGGGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATGGCAAAGGGAAAATAATTACTTGTGGGAGGTCCTCCTTTTGAGTATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTTAGGGATTTTGATTaGCCTGATCATTGTGGGTTG +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELRDFD*PDHCGL
Trigger: CAACCCACAATGATCAGGTCAATCAAAATCCCTAAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCATAAAGGGCATGTTTTaGCATTTCCCACCAATCCCA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSIKGMF*HFPPIP
Trigger: TGGGATTGGTGGGAAATGTCAAAACATGCCCTTTAT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTCTGCATGAGATATTaGACAAGAGTGCTTGGAGTG +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFCMRY*TRVLGV
Trigger: CACTCCAAGCACTCTTGTTCAATATCTCATGCAGAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTCCAAATAAAAGGCTaGGGGATTCCCTTAAGTGAC +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFQIKG*GIPLSD
Trigger: GTCACTTAAGGGAATCCCTCAGCCTTTTATTTGGAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAAAAGGCCTTTATGCTaGCAACAATGTCCACTATGG +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEKRPLC*QQCPLW
Trigger: CCATAGTGGACATTGTTGGCAGCATAAAGGCCTTTT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAAGCAACACACAGCTTaGTTTTACATCCCATGTGTG +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEKQHTA*FYIPCV
Trigger: CACACATGGGATGTAAAAGCAAGCTGTGTGTTGCTT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAAGCAACACACAGCTTaGTTTTACATCCCATGTGTG +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSKQHTA*FYIPCV
Trigger: CACACATGGGATGTAAAAGCAAGCTGTGTGTTGCTT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGTAAGCTTACTCCCTaGTGTTTGGAAATGTGCTTT +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNCKLTP*CLEMCF
Trigger: AAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCATCTGACATCCCAATaGCGTGGCTTTGACTATTTT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEHLTSQ*RGFDYF
Trigger: AAAATAGTCAAAGCCACGGCATTGGGATGTCAGATG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGTGTGAGCATGAGTTaGCCCAAAAAGGTTATTTTC +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNCVSMS*PKKVIF
Trigger: GAAAATAACCTTTTTGGGGCAACTCATGCTCACACA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTCTAGTAAAAATAGCTaGCAGCCAGTGTCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLESSKNS*QPVSKA
Trigger: GGCTTTAGACACTGGCTGCCAGCTATTTTTACTAGA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCATCTGCCAGCCATTTaGCTTGTCTATCAGCTTTTA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSHLPAI*LVYQLL
Trigger: TAAAAGCTGATAGACAAGCCAAATGGCTGGCAGATG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCTACAAGTGTTCCCATaGAACCTAATAGACCAGTTT +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLQVFP*NLIDQF
Trigger: AAACTGGTCTATTAGGTTCCATGGGAACACTTGTAG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp ACTAAATTTAGATGTGCCGACACTTCCCTTTACTTTTCTAGAATCTaGCATCTCTTCCAGAGAGCTAGATTTCTGGCTCTGGTAAGGTTA +
Preference number: 2 (lower is better)
Translates to: TKFRCADTSLYFSRI*HLFQRARFLALVRL
Trigger: TAACCTTACCAGAGCCAGAAATCTAGCTCTCTGGAAGAGATGCAAGATTCTAGAAAAGTAAAGGGAAGTGTCGGCACATCTAAATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTACTTCTAAGTAAGTaGCTAAGCAACACACAGCTT +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLLLSK*LSNTQL
Trigger: AAGCTGTGTGTTGCTTAGTCACTTACTTAGAAGTAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCATTGTTTATCTGAATaGTATGGGATAGGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEHCLSE*YGIGAP
Trigger: AGGAGCACCTATCCCATATCATTCAGATAAACAATG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTCCCAAGACTTCTATaGCTTCTTGAGCAGATATCA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFPRLL*LLEQIS
Trigger: TGATATCTGCTCAAGAAGTCATAGAAGTCTTGGGAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGTTGTTGGAAGGTTTaGGACTGTTTATTGATGGAT +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNCCWKV*DCLLMD
Trigger: ATCCATCAATAAACAGTCTCAAACCTTCCAACAACA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGAGTTTCTCGTTTTATaGAATCCTGAGCTATCTCTG +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEEFLVL*NPELSL
Trigger: CAGAGATAGCTCAGGATTTCATAAAACGAGAAACTC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACATAAGAACTGGCAAATaGGTCTTATTTCCAACTCAG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNIRTGK*VLFPTQ
Trigger: CTGAGTTGGAAATAAGACTCATTTGCCAGTTCTTAT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTTGCCATTCAAACCTaGCTTGAGAAATTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFAIQT*LEKFQG
Trigger: TCCCTGAAATTTCTCAAGGCAGGTTTGAATGGCAAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGTGGTGGGGATGGGATaGAAAATGACAGTGGATATC +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKVVGMG*KMTVDI
Trigger: GATATCCACTGTCATTTTCCATCCCATCCCCACCAC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAAGGAGGGCGTTTCCTaGCTTGGAAAAACCCTGTAT +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKKEGVS*LGKTLY
Trigger: ATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTGGTAAGTCAGATTTaGTTTCCAGGTCATAGTTTG +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVVSQI*FPGHSL
Trigger: CAAACTATGACCTGGAAACCAAATCTGACTTACCAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTAACTCTTCAAGCCTaGTGTGGCTGTAGGAACAGT +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLTLQA*CGCRNS
Trigger: ACTGTTCCTACAGCCACACCAGGCTTGAAGAGTTAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTGAGTATGAAACCCTaGATGAGCAAAAGGGATCTT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELSMKP*MSKRDL
Trigger: AAGATCCCTTTTGCTCATCCAGGGTTTCATACTCAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTATCAGGTGCTGGAATaGATCTATTTACCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: KELQMHSFSPFLVETPPNYQVLE*IYLPFW
Trigger: CCAAAAAGGTAAATAGATCCATTCCAGCACCTGATA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 90 bp TATATTCCCAAACCTACACAGAAATGTAAGCTTACTCCCTGCTGTTaGGAAATGTGCTTTCTTTCCTGCTATATCCAATGCATACCACAA +
Preference number: 2 (lower is better)
Translates to: YIPKPTQKCKLTPCC*EMCFLSCYIQCIPQ
Trigger: TTGTGGTATGCATTGGATATAGCAGGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACATTTCTGTGTAGGTTTGGGAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCAAATGCCTATTTTTaGTACAAAGGTCTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSNAYF*YKGLRA
Trigger: AGCTCTGAGACCTTTGTATCAAAAATAGGCATTTGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTGATCATTGTGGGTTaGAATCTTTTGGTTAAAGTC +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELIIVG*NLLVKV
Trigger: GACTTTAACCAAAAGATTTCAACCCACAATGATCAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTGATCATTGTGGGTTaGAATCTTTTGGTTAAAGTC +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLIIVG*NLLVKV
Trigger: GACTTTAACCAAAAGATTTCAACCCACAATGATCAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTATCATTGTTTATCTaGATGATATGGGATAGGTGC +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLSLFI*MIWDRC
Trigger: GCACCTATCCCATATCATTCAGATAAACAATGATAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTATCTAGCCACAAATaGCTTTGTAGCTATCATTGT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELSSHK*LCSYHC
Trigger: ACAATGATAGCTACAAAGTCATTTGTGGCTAGATAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAAATCACATTGCTTTTaGAAGTGCGAGCGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKKSHCF*KCERVW
Trigger: CCACACACGCTCGCACTTTCAAAAGCAATGTGATTT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAAGATAAATAAGATGTaGTTCTCCTTGCTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSKINKM*FSLLSA
Trigger: TGCACTCAGCAAGGAGAAGCACATCTTATTTATCTT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTTAGGATTAAATTTTaGATGTGGGATCACACCAGT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELRIKF*MWDHTS
Trigger: ACTGGTGTGATCCCACATGCAAAATTTAATCCTAAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCATGTGCTTTCTTTCCTaGTATATCCAATGCATACCA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSMCFLS*YIQCIP
Trigger: TGGTATGCATTGGATATAGCAGGAAAGAAAGCACAT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACAGCAGGCTTCAGACTaGTTTATCTCTTATCAGTGG +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKQQASD*FISYQW
Trigger: CCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCAAGATAGCAGAAGTTaGGTGAGCAGTTCAAAATTT +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSQDSRS*VSSSKF
Trigger: AAATTTTGAACTGCTCACCCAACTTCTGCTATCTTG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGGGAAGAGGGAGAACTaGTCTTGTTTAATGAAATTT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEGKREN*SCLMKF
Trigger: AAATTTCATTAAACAAGACCAGTTCTCCCTCTTCCC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGCTTCTCGATTACAGTaGCTGTTTCTTTGTTCTATT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEASRLQ*LFLCSI
Trigger: AATAGAACAAAGAAACAGCCACTGTAATCGAGAAGC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTGGGTTGAAATCTTTTaGTTAAAGTCAGAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSWVEIF*LKSEVR
Trigger: TCTCACTTCTGACTTTAACCAAAAGATTTCAACCCA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAGTGCACAATTCTGGTaGCATGTAGTGCTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSAQFW*HVVLLR
Trigger: TCTAAGAAGCACTACATGCCACCAGAATTGTGCACT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGGCAACATGGCCCTATaGAATATTAATTATACTGAT +
Preference number: 2 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEGNMAL*NINYTD
Trigger: ATCAGTATAATTAATATTCCATAGGGCCATGTTGCC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGATACATACAGATTCTaGCAACATGGCCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKDTYRF*QHGPME
Trigger: TTCCATAGGGCCATGTTGCCAGAATCTGTATGTATC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATGTTTCTCTGGCAGGTaGATCAATTACTTCCACATG +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKCFSGR*INYFHM
Trigger: CATGTGGAAGTAATTGATCCACCTGCCAGAGAAACA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTGACCTGCAGAACCTaGTATGGTCTATCAATTAAG +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLTCRT*YGLSIK
Trigger: CTTAATTGATAGACCATACCAGGTTCTGCAGGTCAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTCTACACCAGAGAATaGAGACCCAGATTCTTAGAA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKFYTRE*RPRFLE
Trigger: TTCTAAGAATCTGGGTCTTCATTCTCTGGTGTAGAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTGAGTATGAAACCCTaGATGAGCAAAAGGGATCTT +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLSMKP*MSKRDL
Trigger: AAGATCCCTTTTGCTCATCCAGGGTTTCATACTCAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAAAGAAAAATCCAAATaGCACCCAGGCCTACAAATA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKKEKSK*HPGLQI
Trigger: TATTTGTAGGCCTGGGTGGCATTTGGATTTTTCTTT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTTAGGATTAAATTTTaGATGTGGGATCACACCAGT +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLRIKF*MWDHTS
Trigger: ACTGGTGTGATCCCACATGCAAAATTTAATCCTAAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGAAATAAAGCCAAACTaGCATTCATCTGGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKEIKPN*HSSGFS
Trigger: TGAGAAACCAGATGAATGCCAGTTTGGCTTTATTTC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAATCAGTATCAGGTGCTaGAATGGATCTATTTACCTT +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKISIRC*NGSIYL
Trigger: AAGGTAAATAGATCCATTCCAGCACCTGATACTGAT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAAAATCAGTATCAGGTaGTGGAATGGATCTATTTAC +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKKISIR*WNGSIY
Trigger: GTAAATAGATCCATTCCAGCACCTGATACTGATTTT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
34% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAATTAAATTTTGCATGTaGGATCACACCAGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKIKFCM*DHTSLF
Trigger: AAAGAGACTGGTGTGATCCCACATGCAAAATTTAAT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTAGGGTCTGGTAAATaGGGGTCATTTACATTTAAA +
Preference number: 2 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLGSGK*GSFTFK
Trigger: TTTAAATGTAAATGACCCCCATTTACCAGACCCTAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp ATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTaGACGCCAGCAGCATCACTGGCCAGGCTAGGACCC +
Preference number: 3 (lower is better)
Translates to: ILNKSAWSESGV*TPAASLARLGP
Trigger: GGGTCCTAGCCTGGCCAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CTCTGGGGAGGAGAATTCTGCACCTGGGGAAGGGTATaGCCCATTAATGATGGCTGCCAAGGTGTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: LWGGEFCTWGRV*PINDGCQGVRP
Trigger: TGGCCTCACACCTTGGCAGCCATCATTAATGGGCCATACCCTTCCCCAGGTGCAGAATTCTCCTCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTaGAATCTGAGTCACCTGGCTCCTGGTTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: QVSHSIQQQSGY*NLSHLAPGSGS
Trigger: GGAGCCAGAACCAGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
3UTR GCA 72 bp TGCACCTGGGGAAGGGTATGGCCCATTAATGATGGCTaGCAAGGTGTGAGGCCAAAGACATTACAGGACCAG +
Preference number: 3 (lower is better)
Translates to: CTWGRVWPINDG*QGVRPKTLQDQ
Trigger: CTGGTCCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCATCATTAATGGGCCATACCCTTCCCCAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp GAAGGGTATGGCCCATTAATGATGGCTGCCAAGGTGTaGGGCCAAAGACATTACAGGACCAGAGTGGTCAGC +
Preference number: 3 (lower is better)
Translates to: EGYGPLMMAAKV*GQRHYRTRVVS
Trigger: GCTGACCACTCTGGTCCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCATCATTAATGGGCCATACCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCAAAGGTCTCAGAGCTaGAGTGCGACTGAGATTCCC +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMQRSQS*SATEIP
Trigger: GGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTTG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTGCCAGTTCCTAGCTaGAAGAGGGGGAAGTTAGCC +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLPVPS*KRGKLA
Trigger: GGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTTCCAGGTCATAGTTaGCCCACCTCTGCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFPGHS*PTSALG
Trigger: CCCTAGAGCAGAGGTGGGCAAACTATGACCTGGAAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAGCACAGTGGCGGTGTaGATAACTGACGTGATGTGG +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSTVAV*ITDVMW
Trigger: CCACATCACGTCAGTTATCAACACCGCCACTGTGCT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 72 bp ATTGCTTTTGAAAGTGCGAGCGTGTGTGGTGTGCTGTaGTGGCTGAAGCAGCAGGCTTCAGACTGCTTTATC +
Preference number: 3 (lower is better)
Translates to: IAFESASVCGVL*WLKQQASDCFI
Trigger: GATAAAGCAGTCTGAAGCCTGCTGCTTCAGCCAGCACAGCACACCACACACGCTCGCACTTTCAAAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CCAACTCTTCTGCATGAGATATTGAACAAGAGTGCTTaGAGTGAGTCTGGGGTCTGGACGCCAGCAGCATCA +
Preference number: 3 (lower is better)
Translates to: PTLLHEILNKSA*SESGVWTPAAS
Trigger: TGATGCTGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATGCAGAAGAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CCCTGTTCCCAGGCATCCTCTGAGCCTGTGTTTCTCTaGCAGGTGGATCAATTACTTCCACATGTCTTGGAA +
Preference number: 3 (lower is better)
Translates to: PCSQASSEPVFL*QVDQLLPHVLE
Trigger: TTCCAAGACATGTGGAAGTAATTGATCCACCTGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTGACTTCTACAGCATaGCCAGTTCCTAGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: HEILNKSAWSESGVWTPALTSTA*PVPSLK
Trigger: CTTCAAGCTAGGAACTGGCAATGCTGTAGAAGTCAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTTCCAGGTCATAGTTaGCCCACCTCTGCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFPGHS*PTSALG
Trigger: CCCTAGAGCAGAGGTGGGCAAACTATGACCTGGAAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp GGTGCTCCTAGTAGCCAAGGAGGGCGTTTCCTGGCTTaGAAAAACCCTGTATTGATACATACAGATTCTGGC +
Preference number: 3 (lower is better)
Translates to: GAPSSQGGRFLA*KNPVLIHTDSG
Trigger: GCCAGAATCTGTATGTATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTTGGCTACTAGGAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAGACATATCACCCGTTaGTTCATTGCCCATCAGGCC +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLRHITR*FIAHQA
Trigger: GGCCTGATGGGCAATGAACAAACGGGTGATATGTCT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp CACGCCGCTGTCCCCCACCATCTACTTCTAAGTAAGTaGCTAAGCAACACACAGCTTGCTTTTACATCCCAT +
Preference number: 3 (lower is better)
Translates to: HAAVPHHLLLSK*LSNTQLAFTSH
Trigger: ATGGGATGTAAAAGCAAGCTGTGTGTTGCTTAGTCACTTACTTAGAAGTAGATGGTGGGGGACAGCGGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp AAAGACATTACAGGACCAGAGTGGTCAGCTCAGCTCTaGCATTGTATGCCTAATGCAGTCAGTGAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: KDITGPEWSAQL*HCMPNAVSESL
Trigger: CAGGGACTCACTGACTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp CTTATTTCCAACTCAGATAAATTGGTAGTAACGGCCTaGGTGCTCTGGGGAGGAGAATTCTGCACCTGGGGA +
Preference number: 3 (lower is better)
Translates to: LISNSDKLVVTA*VLWGGEFCTWG
Trigger: TCCCCAGGTGCAGAATTCTCCTCCCCAGAGCACTCAGGCCGTTACTACCAATTTATCTGAGTTGGAAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTCACCCGTTTGTTCATaGCCCATCAGGCCATTAAGT +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSPVCS*PIRPLS
Trigger: ACTTAATGGCCTGATGGGCAATGAACAAACGGGTGA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCACATTTCCCCCTCTTaGAACAGAGATGGTGTAATC +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHISPS*NRDGVI
Trigger: GATTACACCATCTCTGTTCAAAGAGGGGGAAATGTG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTCATTCTGGGCTCTTaGAAATCCACATCATCTGCC +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFILGS*KSTSSA
Trigger: GGCAGATGATGTGGATTTCAAAGAGCCCAGAATGAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTTGCTGGGCTGAAGTaGAGGAGCAGCAGTGAGCAC +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELAGLK*RSSSEH
Trigger: GTGCTCACTGCTGCTCCTCAACTTCAGCCCAGCAAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATACACACAAGGTCTTaGATAGGCTTTCTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: HEILNKSAWSESGVWTPAIHTRS*IGFLCS
Trigger: AGAACACAGAAAGCCTATCAAAGACCTTGTGTGTAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTGCCAGTTCCTAGCTaGAAGAGGGGGAAGTTAGCC +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLPVPS*KRGKLA
Trigger: GGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAATAAAGGGCATGTTTaGACATTTCCCACCAATCCC +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMNKGHV*TFPTNP
Trigger: GGGATTGGTGGGAAATGTCAAAACATGCCCTTTATT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTCATCTGCCAGCCATTaGGCTTGTCTATCAGCTTTT +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSSASH*ACLSAF
Trigger: AAAAGCTGATAGACAAGCCAAATGGCTGGCAGATGA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTCATTCTGGGCTCTTaGAAATCCACATCATCTGCC +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFILGS*KSTSSA
Trigger: GGCAGATGATGTGGATTTCAAAGAGCCCAGAATGAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 72 bp TCTTTTGGGTATGGTGAGGAGCTCTATCCACAATCCTaGCAGAGGACCAGATATGTGTTGTGGAAAAAGCAC +
Preference number: 3 (lower is better)
Translates to: SFGYGEELYPQS*QRTRYVLWKKH
Trigger: GTGCTTTTTCCACAACACATATCTGGTCCTCTGGCAGGATTGTGGATAGAGCTCCTCACCATACCCAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp ACTTCATTTAGGCTTGCAGGGCCACTACTTTCCAAATaGCATCCAGGACTGTCTAAGCCAGTGATGAGTTCA +
Preference number: 3 (lower is better)
Translates to: TSFRLAGPLLSK*HPGLSKPVMSS
Trigger: TGAACTCATCACTGGCTTAGACAGTCCTGGATGCCATTTGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp TCCAATTATTTGTTGGTCTCACTAACTCTTCAAGCCTaGTGTGGCTGTAGGAACAGTAAGCACAGTGGCGGT +
Preference number: 3 (lower is better)
Translates to: SNYLLVSLTLQA*CGCRNSKHSGG
Trigger: ACCGCCACTGTGCTTACTGTTCCTACAGCCACACCAGGCTTGAAGAGTTAGTGAGACCAACAAATAATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCAAAGGTCTCAGAGCTaGAGTGCGACTGAGATTCCC +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSQRSQS*SATEIP
Trigger: GGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTTG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCTTCTGCATGAGATATaGAACAAGAGTGCTTGGAGT +
Preference number: 3 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLLHEI*NKSAWS
Trigger: ACTCCAAGCACTCTTGTTCAATATCTCATGCAGAAG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTGGAAAAACCCTGTATaGATACATACAGATTCTGGC +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMWKNPV*IHTDSG
Trigger: GCCAGAATCTGTATGTATCAATACAGGGTTTTTCCA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAGCACAGTGGCGGTGTaGATAACTGACGTGATGTGG +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLESTVAV*ITDVMW
Trigger: CCACATCACGTCAGTTATCAACACCGCCACTGTGCT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCTGTTGTTGGAAGGTTaGAGACTGTTTATTGATGGA +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLLLEG*RLFIDG
Trigger: TCCATCAATAAACAGTCTCAAACCTTCCAACAACAG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCCTCAGACAATCCTTaGGCTACAAGTGTTCCCATG +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPSDNP*ATSVPM
Trigger: CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp ATTTTTGATACAAAGGTCTCAGAGCTTGAGTGCGACTaGGATTCCCGCCATCACTCCCTCGTAATGACACTA +
Preference number: 3 (lower is better)
Translates to: IFDTKVSELECD*DSRHHSLVMTL
Trigger: TAGTGTCATTACGAGGGAGTGATGGCGGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTTGTATCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 72 bp TGTATCATTCCAGGAGCTGTTTCCTTATCCTTTTCATaGCTAAGATTTCTTGGGACAGGGGGAAGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: CIIPGAVSLSFS*LRFLGTGGRGR
Trigger: TCTCCCTCTTCCCCCTGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGAAACAGCTCCTGGAATGATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 72 bp GAAGCGCATCTAGCCAGCATAATGATGGATAGCCTCTaGCTTTTCCTTCTAAAACACGACCTCCTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: EAHLASIMMDSL*LFLLKHDLLKK
Trigger: CTTCTTAAGGAGGTCGTGTTTTAGAAGGAAAAGGCAGAGGCTATCCATCATTATGCTGGCTAGATGCGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp AATACGCTGTGTGATTCTGAATGGTCTGGGGAATGTTaGGACGGATGTGTGTTTAGATTTCTGTCACTCAGG +
Preference number: 3 (lower is better)
Translates to: NTLCDSEWSGEC*DGCVFRFLSLR
Trigger: CCTGAGTGACAGAAATCTAAACACACATCCGTCCCAACATTCCCCAGACCATTCAGAATCACACAGCGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CTCCAAGCAAATGGGACTTCCATGACCTCACCATTTTaGTTAAGAACATCAGAATCCGGCTTCTTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: LQANGTSMTSPF*LRTSESGFFRS
Trigger: GCTTCTGAAGAAGCCGGATTCTGATGTTCTTAACCAAAATGGTGAGGTCATGGAAGTCCCATTTGCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATACACACAAGGTCTTaGATAGGCTTTCTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLIHTRS*IGFLCS
Trigger: AGAACACAGAAAGCCTATCAAAGACCTTGTGTGTAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTTACAGCTCCTAATTaGACTGTAGGAGAATCTGTG +
Preference number: 3 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFTAPN*TVGESV
Trigger: CACAGATTCTCCTACAGTCAAATTAGGAGCTGTAAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAGACATATCACCCGTTaGTTCATTGCCCATCAGGCC +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSRHITR*FIAHQA
Trigger: GGCCTGATGGGCAATGAACAAACGGGTGATATGTCT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACAGGGCGTTTCCTGGCTaGGAAAAACCCTGTATTGAT +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNRAFPG*EKPCID
Trigger: ATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAACCTTAAGCAAACTTaGGTCTATAGTTGCTGGATA +
Preference number: 3 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMNLKQT*VYSCWI
Trigger: TATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTTAATGGAAATATGTaGGAACTAGGGGAACCTTCC +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFNGNM*ELGEPS
Trigger: GGAAGGTTCCCCTAGTTCCAACATATTTCCATTAAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTAATTATTTTCCCTTaGCCATTCAAACCTGCCTTG +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVIIFP*PFKPAL
Trigger: CAAGGCAGGTTTGAATGGCAAAGGGAAAATAATTAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATGTGTGAGCATGAGTaGCCCCAAAAAGGTTATTTT +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLMCEHE*PQKGYF
Trigger: AAAATAACCTTTTTGGGGCAACTCATGCTCACACAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTGTTGTTGGAAGGTTaGAGACTGTTTATTGATGGA +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLLLEG*RLFIDG
Trigger: TCCATCAATAAACAGTCTCAAACCTTCCAACAACAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTACTTAATGAGGCATTaGGAACCCCACTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNYLMRH*EPHSGF
Trigger: GAAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp TGTGAGTTTGGAGGGAGCAAGATAGCAGAAGTTGGGTaGGCAGTTCAAAATTTGCTGAAATTCATCCTCCTC +
Preference number: 3 (lower is better)
Translates to: CEFGGSKIAEVG*AVQNLLKFILL
Trigger: GAGGAGGATGAATTTCAGCAAATTTTGAACTGCTCACCCAACTTCTGCTATCTTGCTCCCTCCAAACTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp AGAGCTAGATTTCTGGCTCTGGTAAGGTTAGTCCTATaGGACCCTTTAATGGTATCTATTCCTGGCTTGCCA +
Preference number: 3 (lower is better)
Translates to: RARFLALVRLVL*DPLMVSIPGLP
Trigger: TGGCAAGCCAGGAATAGATACCATTAAAGGGTCTCATAGGACTAACCTTACCAGAGCCAGAAATCTAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp ATTCAGAGTCTCCTTCTAGCTTTAGACCTTTTTCTGTaGTCCTCAGGTTTCCCATTCCATCCAGCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: IQSLLLALDLFL*SSGFPFHPAAK
Trigger: CTTTGCTGCTGGATGGAATGGGAAACCTGAGGATCACAGAAAAAGGTCTAAAGCTAGAAGGAGACTCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524347.2
3UTR GCA 72 bp CCCCTACTTCACTCTCATTACACAATGATGCTGACCTaGAGAACCTGGTATGGTCTATCAATTAAGGGTCTT +
Preference number: 3 (lower is better)
Translates to: PLLHSHYTMMLT*RTWYGLSIKGL
Trigger: AAGACCCTTAATTGATAGACCATACCAGGTTCTGCAGGTCAGCATCATTGTGTAATGAGAGTGAAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CACTCTCATTACACAATGATGCTGACCTGCAGAACCTaGTATGGTCTATCAATTAAGGGTCTTGGAGGATCA +
Preference number: 3 (lower is better)
Translates to: HSHYTMMLTCRT*YGLSIKGLGGS
Trigger: TGATCCTCCAAGACCCTTAATTGATAGACCATACCAGGTTCTGCAGGTCAGCATCATTGTGTAATGAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp AAGCAGCAGGCTTCAGACTGCTTTATCTCTTATCAGTaGTTTGGCTTTGTGCATGAGAAATTCAGAGGCAAC +
Preference number: 3 (lower is better)
Translates to: KQQASDCFISYQ*FGFVHEKFRGN
Trigger: GTTGCCTCTGAATTTCTCATGCACAAAGCCAAACCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp TGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATaGAACCTAATAGACCAGTTTGGAGTTTCTCGTTTT +
Preference number: 3 (lower is better)
Translates to: CPQTILWLQVFP*NLIDQFGVSRF
Trigger: AAAACGAGAAACTCCAAACTGGTCTATTAGGTTCCATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATCAAATGCCTATTTTaGATACAAAGGTCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLIKCLF*IQRSQS
Trigger: GCTCTGAGACCTTTGTATCAAAAATAGGCATTTGAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCACCCGTTTGTTCATaGCCCATCAGGCCATTAAGT +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSPVCS*PIRPLS
Trigger: ACTTAATGGCCTGATGGGCAATGAACAAACGGGTGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTACTTCATTTAGGCTaGCAGGGCCACTACTTTCCA +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLLHLG*QGHYFP
Trigger: TGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTACTTCATTTAGGCTaGCAGGGCCACTACTTTCCA +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELLHLG*QGHYFP
Trigger: TGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAGGGCGTTTCCTGGCTaGGAAAAACCCTGTATTGAT +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLERAFPG*EKPCID
Trigger: ATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAACCTTAAGCAAACTTaGGTCTATAGTTGCTGGATA +
Preference number: 3 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQNLKQT*VYSCWI
Trigger: TATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGAAATCACATTGCTTTaGAAAGTGCGAGCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNEITLL*KVRACV
Trigger: CACACACGCTCGCACTTTCAAAAGCAATGTGATTTC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCCATTCAAACCTGCCTaGAGAAATTTCAGGGACTCC +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEPFKPA*RNFRDS
Trigger: GGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATGG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTACTTAATGAGGCATTaGGAACCCCACTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEYLMRH*EPHSGF
Trigger: GAAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCTGCTCTTAGGGATTTaGATTGACCTGATCATTGTG +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLLLGI*IDLIIV
Trigger: CACAATGATCAGGTCAATCAAAATCCCTAAGAGCAG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCACATTTCCCCCTCTTaGAACAGAGATGGTGTAATC +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSHISPS*NRDGVI
Trigger: GATTACACCATCTCTGTTCAAAGAGGGGGAAATGTG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCATCTGCCAGCCATTaGGCTTGTCTATCAGCTTTT +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSSASH*ACLSAF
Trigger: AAAAGCTGATAGACAAGCCAAATGGCTGGCAGATGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTTACTCCCTGCTGTTaGGAAATGTGCTTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLTPCC*EMCFLS
Trigger: GGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp GCTACAAGTGTTCCCATGGAACCTAATAGACCAGTTTaGAGTTTCTCGTTTTATGAAATCCTGAGCTATCTC +
Preference number: 3 (lower is better)
Translates to: ATSVPMEPNRPV*SFSFYEILSYL
Trigger: GAGATAGCTCAGGATTTCATAAAACGAGAAACTCCAAACTGGTCTATTAGGTTCCATGGGAACACTTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTTACAGCTCCTAATTaGACTGTAGGAGAATCTGTG +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFTAPN*TVGESV
Trigger: CACAGATTCTCCTACAGTCAAATTAGGAGCTGTAAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTGCTCTTAGGGATTTaGATTGACCTGATCATTGTG +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELLLGI*IDLIIV
Trigger: CACAATGATCAGGTCAATCAAAATCCCTAAGAGCAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTCTCTTATCAGTGGTTaGGCTTTGTGCATGAGAAAT +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSLISG*ALCMRN
Trigger: ATTTCTCATGCACAAAGCCAAACCACTGATAAGAGA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGACAGTGGCTGTTTCTTaGTTCTATTCCACCTGCATA +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLETVAVS*FYSTCI
Trigger: TATGCAGGTGGAATAGAACAAAGAAACAGCCACTGT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTGACTTCTACAGCATaGCCAGTTCCTAGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLTSTA*PVPSLK
Trigger: CTTCAAGCTAGGAACTGGCAATGCTGTAGAAGTCAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTATCAATTAAGGGTCTaGGAGGATCATAACTTTCCT +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNYQLRV*EDHNFP
Trigger: AGGAAAGTTATGATCCTCCAAGACCCTTAATTGATA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACCATTCAAACCTGCCTaGAGAAATTTCAGGGACTCC +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKPFKPA*RNFRDS
Trigger: GGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATGG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGATGTGTGAGCATGAGTaGCCCCAAAAAGGTTATTTT +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEMCEHE*PQKGYF
Trigger: AAAATAACCTTTTTGGGGCAACTCATGCTCACACAT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGAGAAGTTTCATAGATaGGCTCAGATTGTCAAAAGA +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNEKFHR*AQIVKR
Trigger: TCTTTTGACAATCTGAGCCAATCTATGAAACTTCTC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTATTTGATCGCTTCCTaGAGTTTTGCCACAAGTAAA +
Preference number: 3 (lower is better)
Translates to: KELQMHSFSPFLVETPPNYLIAS*SFATSK
Trigger: TTTACTTGTGGCAAAACTCAAGGAAGCGATCAAATA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTTCCCAATAGGTACTaGATTTATATGGTTGATTGC +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVPNRY*IYMVDC
Trigger: GCAATCAACCATATAAATCAAGTACCTATTGGGAAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTACCCAAAGGTGCGATaGTCTAGAAAATGTCATATA +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSYPKVR*SRKCHI
Trigger: TATATGACATTTTCTAGACAATCGCACCTTTGGGTA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTTACTCCCTGCTGTTaGGAAATGTGCTTTCTTTCC +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLTPCC*EMCFLS
Trigger: GGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTATCAATTAAGGGTCTaGGAGGATCATAACTTTCCT +
Preference number: 3 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSYQLRV*EDHNFP
Trigger: AGGAAAGTTATGATCCTCCAAGACCCTTAATTGATA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGAGAAGTTTCATAGATaGGCTCAGATTGTCAAAAGA +
Preference number: 3 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEEKFHR*AQIVKR
Trigger: TCTTTTGACAATCTGAGCCAATCTATGAAACTTCTC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 72 bp TCTGTTTGTGATCTCACTACCCTTAGGATTAAATTTTaGATGTGGGATCACACCAGTCTCTTTTATTGGCAT +
Preference number: 3 (lower is better)
Translates to: SVCDLTTLRIKF*MWDHTSLFYWH
Trigger: ATGCCAATAAAAGAGACTGGTGTGATCCCACATGCAAAATTTAATCCTAAGGGTAGTGAGATCACAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp AAATTTTGCATGTGGGATCACACCAGTCTCTTTTATTaGCATGAAACTTGTGGTGCTAATCTCATTCCTTCA +
Preference number: 3 (lower is better)
Translates to: KFCMWDHTSLFY*HETCGANLIPS
Trigger: TGAAGGAATGAGATTAGCACCACAAGTTTCATGCCAATAAAAGAGACTGGTGTGATCCCACATGCAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAATAAAGGGCATGTTTaGACATTTCCCACCAATCCC +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKNKGHV*TFPTNP
Trigger: GGGATTGGTGGGAAATGTCAAAACATGCCCTTTATT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTTCTGCATGAGATATaGAACAAGAGTGCTTGGAGT +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLLHEI*NKSAWS
Trigger: ACTCCAAGCACTCTTGTTCAATATCTCATGCAGAAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAATCAGTGGTTTGGCTTaGTGCATGAGAAATTCAGAG +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKISGLA*CMRNSE
Trigger: CTCTGAATTTCTCATGCACAAAGCCAAACCACTGAT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR TCA 72 bp CTCTTAGGGATTTTGATTGACCTGATCATTGTGGGTTaGAATCTTTTGGTTAAAGTCAGAAGTGAGAACAGA +
Preference number: 3 (lower is better)
Translates to: LLGILIDLIIVG*NLLVKVRSENR
Trigger: TCTGTTCTCACTTCTGACTTTAACCAAAAGATTTCAACCCACAATGATCAGGTCAATCAAAATCCCTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp ACTCAGTTTGTATTATCTTTCAGTGCACAATTCTGGTaGCATGTAGTGCTTCTTAGAGAAAACACAATAGTG +
Preference number: 3 (lower is better)
Translates to: TQFVLSFSAQFW*HVVLLRENTIV
Trigger: CACTATTGTGTTTTCTCTAAGAAGCACTACATGCCACCAGAATTGTGCACTGAAAGATAATACAAACTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp GACACTCAGTTTGTATTATCTTTCAGTGCACAATTCTaGTGGCATGTAGTGCTTCTTAGAGAAAACACAATA +
Preference number: 3 (lower is better)
Translates to: DTQFVLSFSAQF*WHVVLLRENTI
Trigger: TATTGTGTTTTCTCTAAGAAGCACTACATGCCACCAGAATTGTGCACTGAAAGATAATACAAACTGAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CCA 72 bp CAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTaGTCCAAACTTCATACTACCTTTGGCCTTTATAAA +
Preference number: 3 (lower is better)
Translates to: QYQVLEWIYLPF*SKLHTTFGLYK
Trigger: TTTATAAAGGCCAAAGGTAGTATGAAGTTTGGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATGGAAAAACCCTGTATaGATACATACAGATTCTGGC +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKWKNPV*IHTDSG
Trigger: GCCAGAATCTGTATGTATCAATACAGGGTTTTTCCA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATACCCAAAGGTGCGATaGTCTAGAAAATGTCATATA +
Preference number: 3 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKYPKVR*SRKCHI
Trigger: TATATGACATTTTCTAGACAATCGCACCTTTGGGTA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR GCA 72 bp CTAGGGTCAAACCTTAAGCAAACTTTGGTCTATAGTTaGTGGATATGCGATGAAAATTATCCAAAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: LGSNLKQTLVYS*WICDENYPKRK
Trigger: TTTTCTCTTTGGATAATTTTCATCGCATATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTTTGACCCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp TCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGGCTCCTGGTTCTGGCCACTCGGCCCGCTaGGTGTGTGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SIQQQSGYWNLSHLAPGSGHSAR*VCAGPA
Trigger: GGCTGGGCCTGCACACACTCAGCGGGCCGAGTGGCC...AGAACCAGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGCCCGCTGAGTGTGTaGAGGCCCAGCCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGPLSV*RPSLRS
Trigger: TGAGCGCAGGCTGGGCCTGCACACACTCAGCGGGCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR GCA 90 bp CCTCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACGGCCCGCTGAGTGTGTaGAGGCCCAGCCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PQVSHSIQQQSGYWNLSHGPLSV*RPSLRS
Trigger: TGAGCGCAGGCTGGGCCTGCACACACTCAGCGGGCC...GTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCGTGCTGAGCAGCTCTaGAGGAGGTGGCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMRAEQL*RRWPLG
Trigger: GCCGAGTGGCCACCTCCTTCAGAGCTGCTCAGCACG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGGCCACTCGGCCCGCTaGGTGTGTGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNGHSAR*VCAGPA
Trigger: GGCTGGGCCTGCACACACTCAGCGGGCCGAGTGGCC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR TCA 90 bp CTGGTCGGGACTGGATTTCTTTGGCGTAGAGAGGTTGTAAGAATTCAGAGTCTCCGTGCTGAGCAGCTCTaGAGGAGGTGGCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: LVGTGFLWRREVVRIQSLRAEQL*RRWPLG
Trigger: GCCGAGTGGCCACCTCCTTCAGAGCTGCTCAGCACG...GAGACTCTGAATTCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCCGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR GCA 90 bp TCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGGCTCCTCAGAGCCAGGCATGGTaGTCCGGTGGTGAGTGTACT +
Preference number: 4 (lower is better)
Translates to: SHSIQQQSGYWNLSHLAPQSQAW*SGGECT
Trigger: AGTACACTCACCACCGGAGCACCATGCCTGGCTCTG...AGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR GCA 90 bp CCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGGCTCCTGGTTCTGGCTCCTGCAGCCAAGTCCCTaGCCATGCCTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: PAAKWVLESESPGSWFWLLQPSP*PCLKNF
Trigger: GAAATTCTTCAGGCATGGGCAGGGACTTGGCTGCAG...GAGCCAGAACCAGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp TCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGGCTCCTCCTGGCTCCTGGTTCTaGCTCCTCTCAGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: SHSIQQQSGYWNLSHLAPPGSWF*LLSAHS
Trigger: GGAATGAGCTGAGAGGAGCCAGAACCAGGAGCCAGG...AGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGAGCTTGAGTGCGACTaGGATTCCCGCCATCACTCC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAELECD*DSRHHS
Trigger: GGAGTGATGGCGGGAATCTCAGTCGCACTCAAGCTC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGATCCCAGGGCGTGCTaGGCAGCTCTGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLDPRAC*AALKEV
Trigger: CACCTCCTTCAGAGCTGCTCAGCACGCCCTGGGATC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGACCCCAACCTCTTTaGTGCTGTGGCCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGPQPL*CCGPLS
Trigger: GCTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGACAGGCCGACTCCCCTaGAACAGCGCTCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMTGRLP*NSAHGV
Trigger: GACACCATGAGCGCTGTTGCAGGGGAGTCGGCCTGT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGGAAGCAGGTACTGCTaGGCCTCAGGGGACACAGTG +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMGSRYC*ASGDTV
Trigger: CACTGTGTCCCCTGAGGCCCAGCAGTACCTGCTTCC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CCTCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACGAGTCACCTGGCTCCTaGTTCTGGCTCCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PQVSHSIQQQSGYWNLSHESPGS*FWLLSA
Trigger: AGCTGAGAGGAGCCAGAACCAGGAGCCAGGTGACTC...GTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
3UTR CAA 72 bp AAAAAGCACATCAGAGAGGGATGGACCCCAACCTCTTaGCTGCTGTGGCCCTCTAAGCTCTGGGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KKHIREGWTPTS*LLWPSKLWVKA
Trigger: TGCCTTCACCCAGAGCTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCCATCCCTCTCTGATGTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAAGCGCTCATGGTGTCTaGCGGGCTCATACTCACAAC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPASAHGV*RAHTHN
Trigger: GTTGTGAGTATGAGCCCGGCAGACACCATGAGCGCT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCCACAGAGCCAGGCATaGTGCTCCGGTGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLPQSQA*CSGGEC
Trigger: ACACTCACCACCGGAGCACCATGCCTGGCTCTGTGG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CCTCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCACCTTGTATACCTGTaGCCCCACAGAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQVSHSIQQQSGYWNLSHHLVYL*PHRARH
Trigger: ATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTG...GTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAAAGTGCGAGCGTGTGTaGTGTGCTGTGCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAKCERV*CAVLAE
Trigger: TTCAGCCAGCACAGCACACCACACACGCTCGCACTT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAAAAGGTCTCAGAGCTTaGGTGCGACTGAGATTCCCG +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAKGLRA*VRLRFP
Trigger: CGGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTCCCAGGCATCCTCTaGGCCTGTGTTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFPGIL*ACVSLA
Trigger: TGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTGGTAGTAACGGCCTaGGTGCTCTGGGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLVVTA*VLWGGE
Trigger: TTCTCCTCCCCAGAGCACTCAGGCCGTTACTACCAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCCTCTAAGCTCTGGGTaGAGGCAGGTTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLPLSSG*RQVDSR
Trigger: CCTGCTGTCAACCTGCCTTCACCCAGAGCTTAGAGG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCCCCAACCTCTTTGCTaGTGTGGCCCTCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMPQPLC*CGPLSS
Trigger: AGAGCTTAGAGGGCCACAGCAGCAAAGAGGTTGGGG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAGTGAGTCTGGGGTCTaGACGCCAGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSESGV*TPAASL
Trigger: CAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGAGAATTCTGCACCTaGGGAAGGGTATGGCCCATT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGEFCT*GRVWPI
Trigger: AATGGGCCATACCCTTCCCCAGGTGCAGAATTCTCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGGCTCCTGGTTCTGGCTCCTCCGTACTTCAATATaGCTTTGTCAGACCGACTCA +
Preference number: 4 (lower is better)
Translates to: PAAKWVLESESPGSWFWLLRTSI*LCQTDS
Trigger: TGAGTCGGTCTGACAAAGCCATATTGAAGTACGGAG...GAGCCAGAACCAGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTGGTAGTAACGGCCTaGGTGCTCTGGGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLVVTA*VLWGGE
Trigger: TTCTCCTCCCCAGAGCACTCAGGCCGTTACTACCAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATTTGTGGTGGGTTGTTaGACCAGGAAAGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAFVVGC*TRKALA
Trigger: TGCCAGTGCTTTCCTGGTTCAACAACCCACCACAAA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGATCTCGAAGACCTTCTaGCTCGTTCCTGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMISKTF*LVPVGV
Trigger: CACGCCTACAGGAACGAGGCAGAAGGTCTTCGAGAT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGCGGGAATGAGGTGCTaGTTCCACATACAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLAGMRC*FHIQGS
Trigger: GCTTCCCTGTATGTGGAAGCAGCACCTCATTCCCGC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGATGGCGGGAATGAGGTaGTGCTTCCACATACAGGGA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMMAGMR*CFHIQG
Trigger: TCCCTGTATGTGGAAGCAGCACCTCATTCCCGCCAT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACAAGTGTCGTCTTCCTaGCCTCAGACAATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAQVSSS*PQTILW
Trigger: CCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGCTCTGTCCTGCAGGTaGCTTCCATATTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMALSCR*LPYCQL
Trigger: AAGCTGGCAATATGGAAGCCACCTGCAGGACAGAGC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTGTGGTGTGCTGTGCTaGCTGAAGCAGCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQCGVLC*LKQQAS
Trigger: TGAAGCCTGCTGCTTCAGCCAGCACAGCACACCACA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAAGTGCGAGCGTGTGTaGTGTGCTGTGCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQKCERV*CAVLAE
Trigger: TTCAGCCAGCACAGCACACCACACACGCTCGCACTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGACCTGGGGAAGGGTATaGCCCATTAATGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMTWGRV*PINDGC
Trigger: GCAGCCATCATTAATGGGCCATACCCTTCCCCAGGT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CTTTGGCGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTTCTAGCTTTAGACCTTTCACAAACCGGCCGATaGAAACCGCCCGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: LWRREVVRIQSLLLALDLSQTGR*KPPAIP
Trigger: TGGGATCGCGGGCGGTTTTCATCGGCCGGTTTGTGA...AAGGTCTAAAGCTAGAAGGAGACTCTGAATTCTTACAACCTCTCTACGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGGATGGGATGGAAAATaGCAGTGGATATCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMGWDGK*QWISQG
Trigger: ACCCTGCGATATCCACTGTCATTTTCCATCCCATCC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGTGCAAATCTCAGCCTaGTGCTTGAGTGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAVQISA*CLSVIS
Trigger: TGAGATGACACTCAAGCATCAGGCTGAGATTTGCAC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGTTGAGGAGCAGCAGTaGGCACTGTTGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQVEEQQ*ALLLEG
Trigger: ACCTTCCAACAACAGTGCTCACTGCTGCTCCTCAAC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCACTGTCTTCCTTGTTaGCAAGTGTCGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHCLPC*QVSSSC
Trigger: GCAGGAAGACGACACTTGTCAACAAGGAAGACAGTG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGATGGCTGCCAAGGTGTaGGGCCAAAGACATTACAGG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQMAAKV*GQRHYR
Trigger: CCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCAT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTTCTAGCTTTAGACCTTTTTCTGGATCCCAGGGCGTGCTaGGCAGCTCTGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RREVVRIQSLLLALDLFLDPRAC*AALKEV
Trigger: CACCTCCTTCAGAGCTGCTCAGCACGCCCTGGGATC...CAGAAAAAGGTCTAAAGCTAGAAGGAGACTCTGAATTCTTACAACCTCTCTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATGGCGGGAATGAGGTaGTGCTTCCACATACAGGGA +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLMAGMR*CFHIQG
Trigger: TCCCTGTATGTGGAAGCAGCACCTCATTCCCGCCAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp TCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGGCTCCTGGGACTGGATTTCTTTaGCGTAGAGAGGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SHSIQQQSGYWNLSHLAPGTGFL*RREVVR
Trigger: TCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCC...AGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGTGGTGGGGATGGGATaGAAAATGACAGTGGATATC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAVVGMG*KMTVDI
Trigger: GATATCCACTGTCATTTTCCATCCCATCCCCACCAC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGACCTGGGGAAGGGTATaGCCCATTAATGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQTWGRV*PINDGC
Trigger: GCAGCCATCATTAATGGGCCATACCCTTCCCCAGGT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp CTACGGCTGACTTCTACAGCATTGCCAGTTCCTAGCTaGAAGAGGGGGAAGTTAGCCAGCCTTACTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRLTSTALPVPS*KRGKLASLTKA
Trigger: AGCTTTAGTAAGGCTGGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAATGCTGTAGAAGTCAGCCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp TGCCACCCAGGCCTACAAATACTACTTCATTTAGGCTaGCAGGGCCACTACTTTCCAAATGGCATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CHPGLQILLHLG*QGHYFPNGIQD
Trigger: GTCCTGGATGCCATTTGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAGTATTTGTAGGCCTGGGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp GGTGTGGCTGTAGGAACAGTAAGCACAGTGGCGGTGTaGATAACTGACGTGATGTGGGCTAAACAGACATGT +
Preference number: 4 (lower is better)
Translates to: GVAVGTVSTVAV*ITDVMWAKQTC
Trigger: ACATGTCTGTTTAGCCCACATCACGTCAGTTATCAACACCGCCACTGTGCTTACTGTTCCTACAGCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp CTCTATCCACAATCCTGCCAGAGGACCAGATATGTGTaGTGGAAAAAGCACATCAGAGAGGGATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: LYPQSCQRTRYV*WKKHIREGWTP
Trigger: TGGGGTCCATCCCTCTCTGATGTGCTTTTTCCACAACACATATCTGGTCCTCTGGCAGGATTGTGGATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCACAAACCGGCCGATaGAAACCGCCCGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSQTGR*KPPAIP
Trigger: TGGGATCGCGGGCGGTTTTCATCGGCCGGTTTGTGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTCACAAACCGGCCGATaGAAACCGCCCGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLESQTGR*KPPAIP
Trigger: TGGGATCGCGGGCGGTTTTCATCGGCCGGTTTGTGA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACCCAACTCTTCTGCATaGGATATTGAACAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAPNSSA*DIEQEC
Trigger: GCACTCTTGTTCAATATCTCATGCAGAAGAGTTGGG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGAAGGGCTTCCTTCCTaGAAGACTTTGCCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMEGLPS*KTLPSN
Trigger: GTTACTTGGCAAAGTCTTTCAGGAAGGAAGCCCTTC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCATTCAAACCTGCCTTaGGAAATTTCAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHSNLP*EISGTP
Trigger: GGGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATGTAGAAGTAGGATGTaGAGCCATTGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPACRSRM*SHWKVR
Trigger: CCTCACTTTCCAATGGCTTCACATCCTACTTCTACA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCTCTAAGCTCTGGGTaGAGGCAGGTTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPLSSG*RQVDSR
Trigger: CCTGCTGTCAACCTGCCTTCACCCAGAGCTTAGAGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGTCTTTTGGGTATGGTaGGGAGCTCTATCCACAATC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMVFWVW*GALSTI
Trigger: GATTGTGGATAGAGCTCCTCACCATACCCAAAAGAC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTTGTGGTGGGTTGTTaGACCAGGAAAGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFVVGC*TRKALA
Trigger: TGCCAGTGCTTTCCTGGTTCAACAACCCACCACAAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCAGAGCCAGGCATGGTaGTCCGGTGGTGAGTGTACT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNQSQAW*SGGECT
Trigger: AGTACACTCACCACCGGAGCACCATGCCTGGCTCTG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATTCTTTGAAGGGGTCTaGCCTGACATTAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAFFEGV*PDIRCF
Trigger: GAAACACCTAATGTCAGGGCAGACCCCTTCAAAGAA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGATGATATTACTGCTTaGTGGGCTGAAGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPADDITA*WAEVEE
Trigger: CTCCTCAACTTCAGCCCAGCAAGCAGTAATATCATC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp TCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGTCAGATTTTCCAACTaGAGAACTGCAGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SGFPFHPAAKWVLESESPVRFSN*RTAAKS
Trigger: GGACTTGGCTGCAGTTCTGCAGTTGGAAAATCTGAC...AGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGGACTGGATTTCTTTaGCGTAGAGAGGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGTGFL*RREVVR
Trigger: TCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTGTTTATCTGACAAGTaGACCCAGCTCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLCLSDK*TQLLPE
Trigger: CTCAGGCAGGAGCTGGGTCCACTTGTCAGATAAACA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGGCGTTTCCTGGCTTaGAAAAACCCTGTATTGATA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGRFLA*KNPVLI
Trigger: TATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAAGGAGGGCGTTTCCTaGCTTGGAAAAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMKEGVS*LGKTLY
Trigger: ATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGAGCCTGTGTTTCTCTaGCAGGTGGATCAATTACTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAEPVFL*QVDQLL
Trigger: AAGTAATTGATCCACCTGCCAGAGAAACACAGGCTC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACCTGACTGGGGGAGGTaGTTGATACATGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAPDWGR*LIHEKL
Trigger: AAGTTTTTCATGTATCAACCACCTCCCCCAGTCAGG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAGGGAGAAACCTGACTaGGGGAGGTGGTTGATACAT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLREKPD*GRWLIH
Trigger: ATGTATCAACCACCTCCCCCAGTCAGGTTTCTCCCT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTCCGTACTTCAATATaGCTTTGTCAGACCGACTCA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPALRTSI*LCQTDS
Trigger: TGAGTCGGTCTGACAAAGCCATATTGAAGTACGGAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
3UTR CAA 72 bp AGCCATTTTGAATTCCTACGGCTGACTTCTACAGCATaGCCAGTTCCTAGCTTGAAGAGGGGGAAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: SHFEFLRLTSTA*PVPSLKRGKLA
Trigger: GGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAATGCTGTAGAAGTCAGCCGTAGGAATTCAAAATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp TTACTAGTGAGGCTGTCCACATACTTAATGAGGCATTaGGAACCCCACTCTGGCTTCCTACTGCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: LLVRLSTYLMRH*EPHSGFLLQQV
Trigger: CACCTGTTGCAGTAGGAAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCATTTCTGGCAGACTTaGAGTACAGGGCATTACCTG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLHFWQT*STGHYL
Trigger: CAGGTAATGCCCTGTACTTCAAGTCTGCCAGAAATG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTACACTTGTGTTTATCTaGCAAGTGGACCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLTLVFI*QVDPAP
Trigger: AGGAGCTGGGTCCACTTGTCAGATAAACACAAGTGT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTGAATTCCTACGGCTaGCTTCTACAGCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLNSYG*LLQHCQ
Trigger: CTGGCAATGCTGTAGAAGTCAGCCGTAGGAATTCAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTTAGGGATTTTGATTaGCCTGATCATTGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPALRDFD*PDHCGL
Trigger: CAACCCACAATGATCAGGTCAATCAAAATCCCTAAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGAAGGGCTTCCTTCCTaGAAGACTTTGCCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQEGLPS*KTLPSN
Trigger: GTTACTTGGCAAAGTCTTTCAGGAAGGAAGCCCTTC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAATGGGGGACCACTCACTaGTACTGTGACCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQWGTTH*YCDPPS
Trigger: GCTGGGAGGGTCACAGTATCAGTGAGTGGTCCCCCA...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTCTTTGAAGGGGTCTaGCCTGACATTAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFFEGV*PDIRCF
Trigger: GAAACACCTAATGTCAGGGCAGACCCCTTCAAAGAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGCTACTAGGGCACTATaGAAATGTATCATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAATRAL*KCIIPG
Trigger: TCCTGGAATGATACATTTGCATAGTGCCCTAGTAGC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCCCAACCTCTTTGCTaGTGTGGCCCTCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPQPLC*CGPLSS
Trigger: AGAGCTTAGAGGGCCACAGCAGCAAAGAGGTTGGGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGGACCCCAACCTCTTTaGTGCTGTGGCCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEGPQPL*CCGPLS
Trigger: GCTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTCTATCCACAATCCTaGCAGAGGACCAGATATGTG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLYPQS*QRTRYV
Trigger: CACATATCTGGTCCTCTGGCAGGATTGTGGATAGAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GGGACTGGATTTCTTTGGCGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTTCTATTCCAACTGCAGAACTaGAGCCAAGTCCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GTGFLWRREVVRIQSLLLFQLQN*SQVPAH
Trigger: ATGGGCAGGGACTTGGCTGCAGTTCTGCAGTTGGAA...TAGAAGGAGACTCTGAATTCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGTCAGATTTTCCAACTaGAGAACTGCAGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQVRFSN*RTAAKS
Trigger: GGACTTGGCTGCAGTTCTGCAGTTGGAAAATCTGAC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACCACAGAGCCAGGCATaGTGCTCCGGTGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQPQSQA*CSGGEC
Trigger: ACACTCACCACCGGAGCACCATGCCTGGCTCTGTGG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCACCTTGTATACCTGTaGCCCCACAGAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNHLVYL*PHRARH
Trigger: ATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTGGTGGGGATGGGATaGAAAATGACAGTGGATATC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVVGMG*KMTVDI
Trigger: GATATCCACTGTCATTTTCCATCCCATCCCCACCAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTTCTGTCACTCAGGTaGTGGGGATGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFLSLR*WGWDGK
Trigger: TTTTCCATCCCATCCCCACCACCTGAGTGACAGAAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCTGTGTGATTCTGAATaGTCTGGGGAATGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLCDSE*SGECWD
Trigger: GTCCCAACATTCCCCAGACCATTCAGAATCACACAG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAAGTGCACAATTCTGGTaGCATGTAGTGCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPASAQFW*HVVLLR
Trigger: TCTAAGAAGCACTACATGCCACCAGAATTGTGCACT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATTCAGTGCACAATTCTaGTGGCATGTAGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAFSAQF*WHVVLL
Trigger: AAGAAGCACTACATGCCACCAGAATTGTGCACTGAA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAGTGAGTCTGGGGTCTaGACGCCAGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLESESGV*TPAASL
Trigger: CAGTGATGCTGCTGGCGTCCAGACCCCAGACTCACT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGTCAAAACTATTCTCTaGAGGACCATGGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMVKTIL*RTMEWA
Trigger: TGCCCATTCCATGGTCCTCCAGAGAATAGTTTTGAC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTAACTCTTCAAGCCTaGTGTGGCTGTAGGAACAGT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLTLQA*CGCRNS
Trigger: ACTGTTCCTACAGCCACACCAGGCTTGAAGAGTTAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGATATTACTGCTTGCTaGGCTGAAGTTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLDITAC*AEVEEQ
Trigger: CTGCTCCTCAACTTCAGCCCAGCAAGCAGTAATATC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCCTGACTGGGGGAGGTaGTTGATACATGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMPDWGR*LIHEKL
Trigger: AAGTTTTTCATGTATCAACCACCTCCCCCAGTCAGG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTGCAACAGCGCTCATaGTGTCTGCCGGGCTCATAC +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELQQRS*CLPGSY
Trigger: GTATGAGCCCGGCAGACACCATGAGCGCTGTTGCAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGGACCTGTTATAAGCTaGGTTAGCACTTTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQGPVIS*VSTLVW
Trigger: CCAGACTAAAGTGCTAACTCAGCTTATAACAGGTCC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGATAAAGGGCATGTTTTaGCATTTCCCACCAATCCCA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMIKGMF*HFPPIP
Trigger: TGGGATTGGTGGGAAATGTCAAAACATGCCCTTTAT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCCCAACTCTTCTGCATaGGATATTGAACAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLPNSSA*DIEQEC
Trigger: GCACTCTTGTTCAATATCTCATGCAGAAGAGTTGGG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACATTCCTTCACGTGGTaGTTAGAACAAAATCTAAGC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAHSFTW*LEQNLS
Trigger: GCTTAGATTTTGTTCTAATCACCACGTGAAGGAATG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTCCCAGGCATCCTCTaGGCCTGTGTTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFPGIL*ACVSLA
Trigger: TGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGAAGCCATTGGAAAGTaGGGGACTATTAGACAACTC +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQEAIGK*GTIRQL
Trigger: GAGTTGTCTAATAGTCCCTCACTTTCCAATGGCTTC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGAGGTGGTTGATACATaGAAAACTTTATTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMEVVDT*KTLFPP
Trigger: CGGAGGGAATAAAGTTTTTCATGTATCAACCACCTC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACAGAGCCAGGCATGGTaGTCCGGTGGTGAGTGTACT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQQSQAW*SGGECT
Trigger: AGTACACTCACCACCGGAGCACCATGCCTGGCTCTG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTCTCAGCTCTGTCCTaGAGGTGGCTTCCATATTGC +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVSALS*RWLPYC
Trigger: GCAATATGGAAGCCACCTGCAGGACAGAGCTGAGAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACATCTCGAAGACCTTCTaGCTCGTTCCTGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNISKTF*LVPVGV
Trigger: CACGCCTACAGGAACGAGGCAGAAGGTCTTCGAGAT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCATCTGACATCCCAATaGCGTGGCTTTGACTATTTT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHLTSQ*RGFDYF
Trigger: AAAATAGTCAAAGCCACGGCATTGGGATGTCAGATG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAGCTCTGACATTGTATaGCTAATGCAGTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSSDIV*LMQSVS
Trigger: ACTCACTGACTGCATTAGGCATACAATGTCAGAGCT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCTGCGCTCAGAAGCTaGCCCAGTCAGATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPALRS*PSQIFQ
Trigger: TTGGAAAATCTGACTGGGGCAGCTTCTGAGCGCAGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CCA 90 bp CTTTGGCGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTTCTAGCTTTAGACCTTGGCATCATCTCCACCTaGTCCCTTCACTCAACACTC +
Preference number: 4 (lower is better)
Translates to: LWRREVVRIQSLLLALDLGIIST*SLHSTL
Trigger: GAGTGTTGAGTGAAGGGACCAGGTGGAGATGATGCC...AAGGTCTAAAGCTAGAAGGAGACTCTGAATTCTTACAACCTCTCTACGCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCACCTTGTATACCTGTaGCCCCACAGAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSHLVYL*PHRARH
Trigger: ATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp TCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTGAGTCACCTGAATCCAGATGGTCATaGCCAAGTTCACCAGTATTA +
Preference number: 4 (lower is better)
Translates to: SGFPFHPAAKWVLESESPESRWS*PSSPVL
Trigger: TAATACTGGTGAACTTGGCCATGACCATCTGGATTC...AGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCAACAATGTCCACTATaGATAGTCTTTCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMQQCPL*IVFQRQ
Trigger: CTGCCTCTGAAAGACTATCCATAGTGGACATTGTTG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCATCTGCCAGCCATTTaGCTTGTCTATCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHLPAI*LVYQLL
Trigger: TAAAAGCTGATAGACAAGCCAAATGGCTGGCAGATG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTGTTTCTCTGGCAGGTaGATCAATTACTTCCACATG +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMCFSGR*INYFHM
Trigger: CATGTGGAAGTAATTGATCCACCTGCCAGAGAAACA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGAGCCTGTGTTTCTCTaGCAGGTGGATCAATTACTT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLEPVFL*QVDQLL
Trigger: AAGTAATTGATCCACCTGCCAGAGAAACACAGGCTC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATTGAGTATGAAACCCTaGATGAGCAAAAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPALSMKP*MSKRDL
Trigger: AAGATCCCTTTTGCTCATCCAGGGTTTCATACTCAA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGGAGAATTCTGCACCTaGGGAAGGGTATGGCCCATT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNGEFCT*GRVWPI
Trigger: AATGGGCCATACCCTTCCCCAGGTGCAGAATTCTCC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATTTACTAAGGTTTTGTaGTGGGTTGTTGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAFTKVL*WVVEPG
Trigger: TCCTGGTTCAACAACCCACCACAAAACCTTAGTAAA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAAATCTCCAAGCAAATaGGACTTCCATGACCTCACC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLKSPSK*DFHDLT
Trigger: GGTGAGGTCATGGAAGTCCCATTTGCTTGGAGATTT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp TTGACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTaGGCTACAAGTGTTCCCATGGAACCTAATAGACCA +
Preference number: 4 (lower is better)
Translates to: LTSVVFLPSDNP*ATSVPMEPNRP
Trigger: TGGTCTATTAGGTTCCATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGATAGCAGAAGTTGGGTaGGCAGTTCAAAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQIAEVG*AVQNLL
Trigger: CAGCAAATTTTGAACTGCTCACCCAACTTCTGCTAT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATAAAGGGCATGTTTTaGCATTTCCCACCAATCCCA +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLIKGMF*HFPPIP
Trigger: TGGGATTGGTGGGAAATGTCAAAACATGCCCTTTAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTATCATTGTTTATCTaGATGATATGGGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPALSLFI*MIWDRC
Trigger: GCACCTATCCCATATCATTCAGATAAACAATGATAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTATCTAGCCACAAATaGCTTTGTAGCTATCATTGT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPALSSHK*LCSYHC
Trigger: ACAATGATAGCTACAAAGTCATTTGTGGCTAGATAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTCCCAAGACTTCTATaGCTTCTTGAGCAGATATCA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFPRLL*LLEQIS
Trigger: TGATATCTGCTCAAGAAGTCATAGAAGTCTTGGGAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTTGAGGAGCAGCAGTaGGCACTGTTGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVEEQQ*ALLLEG
Trigger: ACCTTCCAACAACAGTGCTCACTGCTGCTCCTCAAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGATGGCTGCCAAGGTGTaGGGCCAAAGACATTACAGG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEMAAKV*GQRHYR
Trigger: CCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCAT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATAAGAACTGGCAAATaGGTCTTATTTCCAACTCAG +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAIRTGK*VLFPTQ
Trigger: CTGAGTTGGAAATAAGACTCATTTGCCAGTTCTTAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGTAAGGTTAGTCCTATaGGACCCTTTAATGGTATCT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMVRLVL*DPLMVS
Trigger: AGATACCATTAAAGGGTCTCATAGGACTAACCTTAC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCATATTGCCAGCTTCTaGATTGATTTCCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHIASF*IDFHSF
Trigger: AAAGGAGTGGAAATCAATGCAGAAGCTGGCAATATG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTCTCAGCTCTGTCCTaGAGGTGGCTTCCATATTGC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVSALS*RWLPYC
Trigger: GCAATATGGAAGCCACCTGCAGGACAGAGCTGAGAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAAAAGGCCTTTATGCTaGCAACAATGTCCACTATGG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLKRPLC*QQCPLW
Trigger: CCATAGTGGACATTGTTGGCAGCATAAAGGCCTTTT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACAGGGAAGCAGGTACTaGTGGGCCTCAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKQGSRY*WASGDT
Trigger: TGTGTCCCCTGAGGCCCAGCAGTACCTGCTTCCCTG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAAGCAACACACAGCTTaGTTTTACATCCCATGTGTG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQKQHTA*FYIPCV
Trigger: CACACATGGGATGTAAAAGCAAGCTGTGTGTTGCTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGACTACTCCATCCTGCTaGTGTAGTGTAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMTTPSC*CSVKSE
Trigger: TTCTGATTTTACACTACAGCAGCAGGATGGAGTAGT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCCATTAATGATGGCTaGCAAGGTGTGAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPINDG*QGVRPK
Trigger: CTTTGGCCTCACACCTTGGCAGCCATCATTAATGGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTGCAGCCAAGTCCCTaGCCATGCCTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLQPSP*PCLKNF
Trigger: GAAATTCTTCAGGCATGGGCAGGGACTTGGCTGCAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTCCAACTGCAGAACTaGAGCCAAGTCCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFQLQN*SQVPAH
Trigger: ATGGGCAGGGACTTGGCTGCAGTTCTGCAGTTGGAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR GCA 90 bp CGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTTCTAGCTTTAGACCTTTTTCTGCCTGCGCTCAGAAGCTaGCCCAGTCAGATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RREVVRIQSLLLALDLFLPALRS*PSQIFQ
Trigger: TTGGAAAATCTGACTGGGGCAGCTTCTGAGCGCAGG...CAGAAAAAGGTCTAAAGCTAGAAGGAGACTCTGAATTCTTACAACCTCTCTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGGCATCATCTCCACCTaGTCCCTTCACTCAACACTC +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEGIIST*SLHSTL
Trigger: GAGTGTTGAGTGAAGGGACCAGGTGGAGATGATGCC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337851.9
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACACCTTGTATACCTGTaGCCCCACAGAGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQHLVYL*PHRARH
Trigger: ATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGAATCCAGATGGTCATaGCCAAGTTCACCAGTATTA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQESRWS*PSSPVL
Trigger: TAATACTGGTGAACTTGGCCATGACCATCTGGATTC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAGCTTCTACGGCTTTTaGACCTGTTATAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSFYGF*TCYKLS
Trigger: ACTCAGCTTATAACAGGTCCAAAAGCCGTAGAAGCT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGGAATAATCTCCCATTaGCGCAGACGCAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNGIISH*RRRRSR
Trigger: TCGAGATCTGCGTCTGCGCCAATGGGAGATTATTCC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACAAGATAGCAGAAGTTaGGTGAGCAGTTCAAAATTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAQDSRS*VSSSKF
Trigger: AAATTTTGAACTGCTCACCCAACTTCTGCTATCTTG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGATACATACAGATTCTaGCAACATGGCCCTATGGAA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQDTYRF*QHGPME
Trigger: TTCCATAGGGCCATGTTGCCAGAATCTGTATGTATC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGGGAAGAGGGAGAACTaGTCTTGTTTAATGAAATTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAGKREN*SCLMKF
Trigger: AAATTTCATTAAACAAGACCAGTTCTCCCTCTTCCC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCACATCAGAGAGGGATaGACCCCAACCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEHIREG*TPTSLL
Trigger: CAGCAAAGAGGTTGGGGTCCATCCCTCTCTGATGTG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GGGACTGGATTTCTTTGGCGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTTCTACATCCAGCAGCAAAGTaGGTACTGGAATCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: GTGFLWRREVVRIQSLLLHPAAK*VLESES
Trigger: TGACTCAGATTCCAGTACCCACTTTGCTGCTGGATG...TAGAAGGAGACTCTGAATTCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
3UTR CAA 72 bp AAGGTGGTAAGTCAGATTTGGTTTCCAGGTCATAGTTaGCCCACCTCTGCTCTAGGGTCAAACCTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: KVVSQIWFPGHS*PTSALGSNLKQ
Trigger: TTGCTTAAGGTTTGACCCTAGAGCAGAGGTGGGCAAACTATGACCTGGAAACCAAATCTGACTTACCACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGAGCTTGAGTGCGACTaGGATTCCCGCCATCACTCC +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKELECD*DSRHHS
Trigger: GGAGTGATGGCGGGAATCTCAGTCGCACTCAAGCTC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTCAAATGCCTATTTTTaGTACAAAGGTCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSNAYF*YKGLRA
Trigger: AGCTCTGAGACCTTTGTATCAAAAATAGGCATTTGA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTAGGCCAGCCATTTTaGATTCCTACGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVGQPF*IPTADF
Trigger: GAAGTCAGCCGTAGGAATTCAAAATGGCTGGCCTAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTGCAAATCTCAGCCTaGTGCTTGAGTGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVQISA*CLSVIS
Trigger: TGAGATGACACTCAAGCATCAGGCTGAGATTTGCAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTCTACACCAGAGAATaGAGACCCAGATTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFYTRE*RPRFLE
Trigger: TTCTAAGAATCTGGGTCTTCATTCTCTGGTGTAGAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCCTTCCTCCCCACCATaGTACTCATACTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSPSSPP*YSYFQS
Trigger: ACTCTGGAAGTATGAGTATCATGGTGGGGAGGAAGG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGGTCAGCTCAGCTCTaGCATTGTATGCCTAATGCA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNWSAQL*HCMPNA
Trigger: TGCATTAGGCATACAATGTCAGAGCTGAGCTGACCA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTACAGATCAAACCCTaGTCCCTTTGCTTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQLQIKP*SLCLED
Trigger: ATCTTCTAAGCAAAGGGATCAGGGTTTGATCTGTAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTCTAATCTTTTTGCATaGTCCCTGGCTGAGTTAATT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSNLFA*SLAELI
Trigger: AATTAACTCAGCCAGGGATCATGCAAAAAGATTAGA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGACTGGGGGAGGTGGTTaGTACATGAAAAACTTTATT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQTGGGG*YMKNFI
Trigger: AATAAAGTTTTTCATGTATCAACCACCTCCCCCAGT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCACTTCATTATTGTCTaGAGAGAAGAGCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHFIIV*REEQFS
Trigger: GGAAAATTGCTCTTCTCTGCAGACAATAATGAAGTG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGTCTCAGCTCTGTCCTaGAGGTGGCTTCCATATTGC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQVSALS*RWLPYC
Trigger: GCAATATGGAAGCCACCTGCAGGACAGAGCTGAGAC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTTGCCATTCAAACCTaGCTTGAGAAATTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFAIQT*LEKFQG
Trigger: TCCCTGAAATTTCTCAAGGCAGGTTTGAATGGCAAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCCCATTAATGATGGCTaGCAAGGTGTGAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEPINDG*QGVRPK
Trigger: CTTTGGCCTCACACCTTGGCAGCCATCATTAATGGG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATGATGGATAGCCTCTaGCTTTTCCTTCTAAAACAC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLMMDSL*LFLLKH
Trigger: GTGTTTTAGAAGGAAAAGGCAGAGGCTATCCATCAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGGCATCATCTCCACCTaGTCCCTTCACTCAACACTC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQGIIST*SLHSTL
Trigger: GAGTGTTGAGTGAAGGGACCAGGTGGAGATGATGCC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTACAGGGCATTACCTaGTCGGGACTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVQGIT*SGLDFF
Trigger: AAAGAAATCCAGTCCCGACCAGGTAATGCCCTGTAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGCTCTGTCCTGCAGGTaGCTTCCATATTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQALSCR*LPYCQL
Trigger: AAGCTGGCAATATGGAAGCCACCTGCAGGACAGAGC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGGAATAATCTCCCATTaGCGCAGACGCAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSGIISH*RRRRSR
Trigger: TCGAGATCTGCGTCTGCGCCAATGGGAGATTATTCC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATGGGTTGAAATCTTTTaGTTAAAGTCAGAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAWVEIF*LKSEVR
Trigger: TCTCACTTCTGACTTTAACCAAAAGATTTCAACCCA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTGAACAAGAGTGCTTaGAGTGAGTCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLNKSA*SESGVW
Trigger: CCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATTAAATTTTGCATGTaGGATCACACCAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: HEILNKSAWSESGVWTPAIKFCM*DHTSLF
Trigger: AAAGAGACTGGTGTGATCCCACATGCAAAATTTAAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGTGGTAAGTCAGATTTaGTTTCCAGGTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQVVSQI*FPGHSL
Trigger: CAAACTATGACCTGGAAACCAAATCTGACTTACCAC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTCTCTGGAGGACCATaGAATGGGCATCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFSGGP*NGHPSR
Trigger: TCTAGAGGGATGCCCATTCCATGGTCCTCCAGAGAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGATCAGTATCAGGTGCTaGAATGGATCTATTTACCTT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMISIRC*NGSIYL
Trigger: AAGGTAAATAGATCCATTCCAGCACCTGATACTGAT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTTGGAACCCCACTCTaGCTTCCTACTGCAACAGGT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFGTPL*LPTATG
Trigger: ACCTGTTGCAGTAGGAAGCCAGAGTGGGGTTCCAAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTCTAGGCATGTGGGGTaGATTTTAAATCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSRHVG*ILNQAD
Trigger: ATCTGCTTGATTTAAAATCCACCCCACATGCCTAGA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTTTACTAAGGTTTTGTaGTGGGTTGTTGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQFTKVL*WVVEPG
Trigger: TCCTGGTTCAACAACCCACCACAAAACCTTAGTAAA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAGGGAGAAACCTGACTaGGGGAGGTGGTTGATACAT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEREKPD*GRWLIH
Trigger: ATGTATCAACCACCTCCCCCAGTCAGGTTTCTCCCT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp TTTCCCTTAAACAGAGACATATCACCCGTTTGTTCATaGCCCATCAGGCCATTAAGTAGCTTCCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: FPLNRDISPVCS*PIRPLSSFQLT
Trigger: AGTGAGCTGGAAGCTACTTAATGGCCTGATGGGCAATGAACAAACGGGTGATATGTCTCTGTTTAAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp CTGGGCTCTTTGAAATCCACATCATCTGCCAGCCATTaGGCTTGTCTATCAGCTTTTAAGATGTCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGSLKSTSSASH*ACLSAFKMSSH
Trigger: ATGACTGGACATCTTAAAAGCTGATAGACAAGCCAAATGGCTGGCAGATGATGTGGATTTCAAAGAGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp TCTCCAAGCAAATGGGACTTCCATGACCTCACCATTTaGGTTAAGAACATCAGAATCCGGCTTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPSKWDFHDLTI*VKNIRIRLLQK
Trigger: CTTCTGAAGAAGCCGGATTCTGATGTTCTTAACCAAAATGGTGAGGTCATGGAAGTCCCATTTGCTTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCACACTTGTGTTTATCTaGCAAGTGGACCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSTLVFI*QVDPAP
Trigger: AGGAGCTGGGTCCACTTGTCAGATAAACACAAGTGT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTCAAATGCCTATTTTTaGTACAAAGGTCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSNAYF*YKGLRA
Trigger: AGCTCTGAGACCTTTGTATCAAAAATAGGCATTTGA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTGAATTCCTACGGCTaGCTTCTACAGCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLNSYG*LLQHCQ
Trigger: CTGGCAATGCTGTAGAAGTCAGCCGTAGGAATTCAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTGATCATTGTGGGTTaGAATCTTTTGGTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLIIVG*NLLVKV
Trigger: GACTTTAACCAAAAGATTTCAACCCACAATGATCAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTATCTAGCCACAAATaGCTTTGTAGCTATCATTGT +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLSSHK*LCSYHC
Trigger: ACAATGATAGCTACAAAGTCATTTGTGGCTAGATAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGGGATACATAGTCTCTaGCACAACTACTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSGIHSL*HNYSIL
Trigger: CAGGATGGAGTAGTTGTGTCAGAGACTATGTATCCC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTGGTCAGCTCAGCTCTaGCATTGTATGCCTAATGCA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEWSAQL*HCMPNA
Trigger: TGCATTAGGCATACAATGTCAGAGCTGAGCTGACCA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTCTCCCTTCCTAGTTaGAACACCACCAAACCTCAT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFSLPS*NTTKPH
Trigger: ATGAGGTTTGGTGGTGTTTCAACTAGGAAGGGAGAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTCTTTTGGGTATGGTaGGGAGCTCTATCCACAATC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVFWVW*GALSTI
Trigger: GATTGTGGATAGAGCTCCTCACCATACCCAAAAGAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTGTATTATCTTTCAGTaGACAATTCTGGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQCIIFQ*TILVAC
Trigger: ACATGCCACCAGAATTGTGCACTGAAAGATAATACA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAAGATAAATAAGATGTaGTTCTCCTTGCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQKINKM*FSLLSA
Trigger: TGCACTCAGCAAGGAGAAGCACATCTTATTTATCTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTATGTGCTTTCTTTCCTaGTATATCCAATGCATACCA +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLMCFLS*YIQCIP
Trigger: TGGTATGCATTGGATATAGCAGGAAAGAAAGCACAT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACACAATGATGCTGACCTaGAGAACCTGGTATGGTCTA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNTMMLT*RTWYGL
Trigger: TAGACCATACCAGGTTCTGCAGGTCAGCATCATTGT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCAGCAGGCTTCAGACTaGTTTATCTCTTATCAGTGG +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNQQASD*FISYQW
Trigger: CCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGGGACTGGATTTCTTTaGCGTAGAGAGGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNGTGFL*RREVVR
Trigger: TCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTACAGGGCATTACCTaGTCGGGACTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVQGIT*SGLDFF
Trigger: AAAGAAATCCAGTCCCGACCAGGTAATGCCCTGTAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTTCTGTCACTCAGGTaGTGGGGATGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFLSLR*WGWDGK
Trigger: TTTTCCATCCCATCCCCACCACCTGAGTGACAGAAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTGGTCTGGGGAATGTTaGGACGGATGTGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEWSGEC*DGCVFR
Trigger: TCTAAACACACATCCGTCCCAACATTCCCCAGACCA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTTCCAGGCTTCTTTTaGGGTAGGAGTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELPGFF*GRSSAL
Trigger: AAGAGCAGAACTCCTACCCCAAAAGAAGCCTGGAAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTTCCAGGCTTCTTTTaGGGTAGGAGTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLPGFF*GRSSAL
Trigger: AAGAGCAGAACTCCTACCCCAAAAGAAGCCTGGAAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGGCAACATGGCCCTATaGAATATTAATTATACTGAT +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMGNMAL*NINYTD
Trigger: ATCAGTATAATTAATATTCCATAGGGCCATGTTGCC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGAAATAAAGCCAAACTaGCATTCATCTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLEIKPN*HSSGFS
Trigger: TGAGAAACCAGATGAATGCCAGTTTGGCTTTATTTC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTAGGGTCTGGTAAATaGGGGTCATTTACATTTAAA +
Preference number: 4 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLGSGK*GSFTFK
Trigger: TTTAAATGTAAATGACCCCCATTTACCAGACCCTAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTATCAGGTGCTGGAATaGATCTATTTACCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLYQVLE*IYLPFW
Trigger: CCAAAAAGGTAAATAGATCCATTCCAGCACCTGATA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGATCAGTATCAGGTGCTaGAATGGATCTATTTACCTT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQISIRC*NGSIYL
Trigger: AAGGTAAATAGATCCATTCCAGCACCTGATACTGAT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGCTTCTCGATTACAGTaGCTGTTTCTTTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQASRLQ*LFLCSI
Trigger: AATAGAACAAAGAAACAGCCACTGTAATCGAGAAGC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp AGCACGCACACACACGTACACATACACACAAGGTCTTaGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: STHTHVHIHTRS*IGFLCSSKNSW
Trigger: CCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGACCTTGTGTGTATGTGTACGTGTGTGTGCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp AGCAGGCTTCAGACTGCTTTATCTCTTATCAGTGGTTaGGCTTTGTGCATGAGAAATTCAGAGGCAACTGTA +
Preference number: 4 (lower is better)
Translates to: SRLQTALSLISG*ALCMRNSEATV
Trigger: TACAGTTGCCTCTGAATTTCTCATGCACAAAGCCAAACCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp ATGAATATGGGAACTAAAGAAACACTGTCTTCCTTGTaGACAAGTGTCGTCTTCCTGCCCTCAGACAATCCT +
Preference number: 4 (lower is better)
Translates to: MNMGTKETLSSL*TSVVFLPSDNP
Trigger: AGGATTGTCTGAGGGCAGGAAGACGACACTTGTCAACAAGGAAGACAGTGTTTCTTTAGTTCCCATATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTAGACCTTTTTCTGTaGTCCTCAGGTTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLDLFL*SSGFPF
Trigger: GAATGGGAAACCTGAGGATCACAGAAAAAGGTCTAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACATTTCTGGCAGACTTaGAGTACAGGGCATTACCTG +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQHFWQT*STGHYL
Trigger: CAGGTAATGCCCTGTACTTCAAGTCTGCCAGAAATG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGGACCTGTTATAAGCTaGGTTAGCACTTTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSGPVIS*VSTLVW
Trigger: CCAGACTAAAGTGCTAACTCAGCTTATAACAGGTCC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTTTGGCTTTGTGCATaGGAAATTCAGAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVWLCA*EIQRQL
Trigger: CAGTTGCCTCTGAATTTCTCATGCACAAAGCCAAAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTTTGGCTTTGTGCATaGGAAATTCAGAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVWLCA*EIQRQL
Trigger: CAGTTGCCTCTGAATTTCTCATGCACAAAGCCAAAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAAATCACATTGCTTTTaGAAGTGCGAGCGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEKSHCF*KCERVW
Trigger: CCACACACGCTCGCACTTTCAAAAGCAATGTGATTT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGAAGCCATTGGAAAGTaGGGGACTATTAGACAACTC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSEAIGK*GTIRQL
Trigger: GAGTTGTCTAATAGTCCCTCACTTTCCAATGGCTTC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTGTAGAAGTAGGATGTaGAGCCATTGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLECRSRM*SHWKVR
Trigger: CCTCACTTTCCAATGGCTTCACATCCTACTTCTACA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAAGGAAATCCCTGACTaGCTTACTGTAGAGTCGAGT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEKEIPD*LTVESS
Trigger: ACTCGACTCTACAGTAAGTCAGTCAGGGATTTCCTT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACCTTCTTCAAATCCCTaGGGATGGAGGTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQPSSNP*GWRFLP
Trigger: TGGAAGAAACCTCCATCCTCAGGGATTTGAAGAAGG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAAAATCAGTATCAGGTaGTGGAATGGATCTATTTAC +
Preference number: 4 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLKISIR*WNGSIY
Trigger: GTAAATAGATCCATTCCAGCACCTGATACTGATTTT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAAAATCAGTATCAGGTaGTGGAATGGATCTATTTAC +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQKISIR*WNGSIY
Trigger: GTAAATAGATCCATTCCAGCACCTGATACTGATTTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGTACAGGGCATTACCTaGTCGGGACTGGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQVQGIT*SGLDFF
Trigger: AAAGAAATCCAGTCCCGACCAGGTAATGCCCTGTAC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACAGCTTCTACGGCTTTTaGACCTGTTATAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSFYGF*TCYKLS
Trigger: ACTCAGCTTATAACAGGTCCAAAAGCCGTAGAAGCT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGCTCTGTCCTGCAGGTaGCTTCCATATTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKALSCR*LPYCQL
Trigger: AAGCTGGCAATATGGAAGCCACCTGCAGGACAGAGC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCAACAATGTCCACTATaGATAGTCTTTCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNQQCPL*IVFQRQ
Trigger: CTGCCTCTGAAAGACTATCCATAGTGGACATTGTTG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTACTTCCACATGTCTTaGAAGGCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSYFHMS*KAGFPH
Trigger: ATGTGGAAAGCCTGCCTTCCAAGACATGTGGAAGTA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCCTAATAGACCAGTTTaGAGTTTCTCGTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQPNRPV*SFSFYE
Trigger: TTCATAAAACGAGAAACTCCAAACTGGTCTATTAGG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACCGACTCACAGCTACTaGGCTGTCTCCAGCTATCAA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKPTHSY*AVSSYQ
Trigger: TTGATAGCTGGAGACAGCCCAGTAGCTGTGAGTCGG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAAGTTATGGGAAGGGTTaGCCTGTTGAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQSYGKG*PVEAVA
Trigger: AGCTACAGCTTCAACAGGCCAACCCTTCCCATAACT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
3UTR CAA 72 bp CCCACCTCTGCTCTAGGGTCAAACCTTAAGCAAACTTaGGTCTATAGTTGCTGGATATGCGATGAAAATTAT +
Preference number: 4 (lower is better)
Translates to: PTSALGSNLKQT*VYSCWICDENY
Trigger: ATAATTTTCATCGCATATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTTTGACCCTAGAGCAGAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTAGACCTTTTTCTGTaGTCCTCAGGTTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLDLFL*SSGFPF
Trigger: GAATGGGAAACCTGAGGATCACAGAAAAAGGTCTAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGGACCTGTTATAAGCTaGGTTAGCACTTTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQGPVIS*VSTLVW
Trigger: CCAGACTAAAGTGCTAACTCAGCTTATAACAGGTCC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCATAGCAGAAGTTGGGTaGGCAGTTCAAAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSIAEVG*AVQNLL
Trigger: CAGCAAATTTTGAACTGCTCACCCAACTTCTGCTAT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTCTGCATGAGATATTaGACAAGAGTGCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEFCMRY*TRVLGV
Trigger: CACTCCAAGCACTCTTGTTCAATATCTCATGCAGAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCATTGTTTATCTGAATaGTATGGGATAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNHCLSE*YGIGAP
Trigger: AGGAGCACCTATCCCATATCATTCAGATAAACAATG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCAGGGACTCCCTTATaGAGAAAGCTTTTAAGAACC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSGTPL*RKLLRT
Trigger: GGTTCTTAAAAGCTTTCTTCATAAGGGAGTCCCTGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGAGGTGGTTGATACATaGAAAACTTTATTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSEVVDT*KTLFPP
Trigger: CGGAGGGAATAAAGTTTTTCATGTATCAACCACCTC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGAAGCTGTAGCTCTTTaGACTTCTGTCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQEAVAL*TSVLLI
Trigger: GATGAGAAGGACAGAAGTTCAAAGAGCTACAGCTTC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACTTGGCTCCTTTTGTTaGTACACTGTAGGATCCAAC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQLGSFC*YTVGSN
Trigger: GTTGGATCCTACAGTGTATCAACAAAAGGAGCCAAG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAATTCTTTGAAGGGGTCTaGCCTGACATTAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQFFEGV*PDIRCF
Trigger: GAAACACCTAATGTCAGGGCAGACCCCTTCAAAGAA...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAAAAGGCCTTTATGCTaGCAACAATGTCCACTATGG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSKRPLC*QQCPLW
Trigger: CCATAGTGGACATTGTTGGCAGCATAAAGGCCTTTT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGCTACTAGGGCACTATaGAAATGTATCATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEATRAL*KCIIPG
Trigger: TCCTGGAATGATACATTTGCATAGTGCCCTAGTAGC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACAAGTGTCGTCTTCCTaGCCTCAGACAATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKQVSSS*PQTILW
Trigger: CCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATCTCCACACAGCCTCTaGTCTGTAGTGCTAGATGCT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSPHSL*SVVLDA
Trigger: AGCATCTAGCACTACAGAGCAGAGGCTGTGTGGAGA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGAATCCAGATGGTCATaGCCAAGTTCACCAGTATTA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEESRWS*PSSPVL
Trigger: TAATACTGGTGAACTTGGCCATGACCATCTGGATTC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGGGACTGGATTTCTTTaGCGTAGAGAGGTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQGTGFL*RREVVR
Trigger: TCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATGTTTATCTGACAAGTaGACCCAGCTCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKCLSDK*TQLLPE
Trigger: CTCAGGCAGGAGCTGGGTCCACTTGTCAGATAAACA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCTAGTAAAAATAGCTaGCAGCCAGTGTCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSSKNS*QPVSKA
Trigger: GGCTTTAGACACTGGCTGCCAGCTATTTTTACTAGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAGTGCACAATTCTGGTaGCATGTAGTGCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLESAQFW*HVVLLR
Trigger: TCTAAGAAGCACTACATGCCACCAGAATTGTGCACT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGATACATACAGATTCTaGCAACATGGCCCTATGGAA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSDTYRF*QHGPME
Trigger: TTCCATAGGGCCATGTTGCCAGAATCTGTATGTATC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTGGTAAGTCAGATTTaGTTTCCAGGTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVVSQI*FPGHSL
Trigger: CAAACTATGACCTGGAAACCAAATCTGACTTACCAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTGACCTGCAGAACCTaGTATGGTCTATCAATTAAG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLTCRT*YGLSIK
Trigger: CTTAATTGATAGACCATACCAGGTTCTGCAGGTCAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTGACCTGCAGAACCTaGTATGGTCTATCAATTAAG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELTCRT*YGLSIK
Trigger: CTTAATTGATAGACCATACCAGGTTCTGCAGGTCAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAGTCTCCTTCTAGCTTTAGACCTTTTTCTGTGATCCTCAGGTTTCCCATTCCAAATCTCAGAAGCAGATaGATGCTAATTGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ESPSSFRPFSVILRFPIPNLRSR*MLIVKF
Trigger: GAACTTCACAATTAGCATCCATCTGCTTCTGAGATT...TGGAATGGGAAACCTGAGGATCACAGAAAAAGGTCTAAAGCTAGAAGGAGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTACTTCTAAGTAAGTaGCTAAGCAACACACAGCTT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELLLSK*LSNTQL
Trigger: AAGCTGTGTGTTGCTTAGTCACTTACTTAGAAGTAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGAGTTTCTCGTTTTATaGAATCCTGAGCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSEFLVL*NPELSL
Trigger: CAGAGATAGCTCAGGATTTCATAAAACGAGAAACTC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTTACAGATCAAACCCTaGTCCCTTTGCTTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELQIKP*SLCLED
Trigger: ATCTTCTAAGCAAAGGGATCAGGGTTTGATCTGTAA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTCTAATCTTTTTGCATaGTCCCTGGCTGAGTTAATT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSNLFA*SLAELI
Trigger: AATTAACTCAGCCAGGGATCATGCAAAAAGATTAGA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGACTGGGGGAGGTGGTTaGTACATGAAAAACTTTATT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLETGGGG*YMKNFI
Trigger: AATAAAGTTTTTCATGTATCAACCACCTCCCCCAGT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCACTTCATTATTGTCTaGAGAGAAGAGCAATTTTCC +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNHFIIV*REEQFS
Trigger: GGAAAATTGCTCTTCTCTGCAGACAATAATGAAGTG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACAAGATAAATAAGATGTaGTTCTCCTTGCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNKINKM*FSLLSA
Trigger: TGCACTCAGCAAGGAGAAGCACATCTTATTTATCTT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACAAAGAAAAATCCAAATaGCACCCAGGCCTACAAATA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNKEKSK*HPGLQI
Trigger: TATTTGTAGGCCTGGGTGGCATTTGGATTTTTCTTT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCTTAGGATTAAATTTTaGATGTGGGATCACACCAGT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLRIKF*MWDHTS
Trigger: ACTGGTGTGATCCCACATGCAAAATTTAATCCTAAG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTGTAAGCTTACTCCCTaGTGTTTGGAAATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSCKLTP*CLEMCF
Trigger: AAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATGTCTGATAGGAACCTaGCTTACCACACACAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKCLIGT*LTTHKQ
Trigger: CTGCTTGTGTGTGGTAAGGCAGGTTCCTATCAGACA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTTGCCATTCAAACCTaGCTTGAGAAATTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFAIQT*LEKFQG
Trigger: TCCCTGAAATTTCTCAAGGCAGGTTTGAATGGCAAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTGTGTGAGCATGAGTTaGCCCAAAAAGGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLECVSMS*PKKVIF
Trigger: GAAAATAACCTTTTTGGGGCAACTCATGCTCACACA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTCTATCCACAATCCTaGCAGAGGACCAGATATGTG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLYPQS*QRTRYV
Trigger: CACATATCTGGTCCTCTGGCAGGATTGTGGATAGAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGATGATGGATAGCCTCTaGCTTTTCCTTCTAAAACAC +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEMMDSL*LFLLKH
Trigger: GTGTTTTAGAAGGAAAAGGCAGAGGCTATCCATCAT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACTGCTAATTCATCGATaGTCAAGAAGAAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQLLIHR*SRRNWG
Trigger: CCCCCAATTTCTTCTTGAGCATCGATGAATTAGCAG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGAATCCAGATGGTCATaGCCAAGTTCACCAGTATTA +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQESRWS*PSSPVL
Trigger: TAATACTGGTGAACTTGGCCATGACCATCTGGATTC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAAGCTTCTACGGCTTTTaGACCTGTTATAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQSFYGF*TCYKLS
Trigger: ACTCAGCTTATAACAGGTCCAAAAGCCGTAGAAGCT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATGGTCTGGGGAATGTTaGGACGGATGTGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKWSGEC*DGCVFR
Trigger: TCTAAACACACATCCGTCCCAACATTCCCCAGACCA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTCTTTGAACAGAGATaGTGTAATCCCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLFEQR*CNPLSQ
Trigger: CTGGGACAGGGGATTACACCATCTCTGTTCAAAGAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACATCCCTCTAGACTATaGGAGGGTGAAGTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKHPSRL*EGEVEN
Trigger: GTTTTCCACTTCACCCTCCCATAGTCTAGAGGGATG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTGAGTATGAAACCCTaGATGAGCAAAAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLSMKP*MSKRDL
Trigger: AAGATCCCTTTTGCTCATCCAGGGTTTCATACTCAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGGGAAGAGGGAGAACTaGTCTTGTTTAATGAAATTT +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNGKREN*SCLMKF
Trigger: AAATTTCATTAAACAAGACCAGTTCTCCCTCTTCCC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGATATTACTGCTTGCTaGGCTGAAGTTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKDITAC*AEVEEQ
Trigger: CTGCTCCTCAACTTCAGCCCAGCAAGCAGTAATATC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTACAAGTGTTCCCATaGAACCTAATAGACCAGTTT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELQVFP*NLIDQF
Trigger: AAACTGGTCTATTAGGTTCCATGGGAACACTTGTAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACATGACCTCACCATTTTaGTTAAGAACATCAGAATCC +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNMTSPF*LRTSES
Trigger: GGATTCTGATGTTCTTAACCAAAATGGTGAGGTCAT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGATGGATTGTGGGTTTaGCTTATAATCATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQDGLWV*LIIMLL
Trigger: GAGCAGCATGATTATAAGCCAAACCCACAATCCATC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTGTTGTTGGAAGGTTTaGGACTGTTTATTGATGGAT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLECCWKV*DCLLMD
Trigger: ATCCATCAATAAACAGTCTCAAACCTTCCAACAACA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGATAAGAACTGGCAAATaGGTCTTATTTCCAACTCAG +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEIRTGK*VLFPTQ
Trigger: CTGAGTTGGAAATAAGACTCATTTGCCAGTTCTTAT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAAGGAAATCCCTGACTaGCTTACTGTAGAGTCGAGT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKKEIPD*LTVESS
Trigger: ACTCGACTCTACAGTAAGTCAGTCAGGGATTTCCTT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTCTACAACCAATTCTaGTTTTTCAGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFYNQF*FFSHSP
Trigger: TGGAGAATGGCTGAAAAATCAGAATTGGTTGTAGAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR TCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAAAGAAATCATCACTTTaGTGGATTGTGGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQKKSSL*WIVGLA
Trigger: AGCCAAACCCACAATCCATCAAAGTGATGATTTCTT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACATATTGCCAGCTTCTaGATTGATTTCCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQHIASF*IDFHSF
Trigger: AAAGGAGTGGAAATCAATGCAGAAGCTGGCAATATG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR GCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAAAGAAAAATCCAAATaGCACCCAGGCCTACAAATA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEKEKSK*HPGLQI
Trigger: TATTTGTAGGCCTGGGTGGCATTTGGATTTTTCTTT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAACAATGATGCTGACCTaGAGAACCTGGTATGGTCTA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKTMMLT*RTWYGL
Trigger: TAGACCATACCAGGTTCTGCAGGTCAGCATCATTGT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCCTTATCCTTTTCATaGCTAAGATTTCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSLSFS*LRFLGT
Trigger: TGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGATGATATTACTGCTTaGTGGGCTGAAGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKDDITA*WAEVEE
Trigger: CTCCTCAACTTCAGCCCAGCAAGCAGTAATATCATC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTTAGCACTTTAGTCTaGTCATTGAGAATGTTCACT +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVSTLV*SLRMFT
Trigger: AGTGAACATTCTCAATGACCAGACTAAAGTGCTAAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATACTTCCACATGTCTTaGAAGGCAGGCTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKYFHMS*KAGFPH
Trigger: ATGTGGAAAGCCTGCCTTCCAAGACATGTGGAAGTA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGAAATAAAGCCAAACTaGCATTCATCTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSEIKPN*HSSGFS
Trigger: TGAGAAACCAGATGAATGCCAGTTTGGCTTTATTTC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTAGGGTCTGGTAAATaGGGGTCATTTACATTTAAA +
Preference number: 4 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLGSGK*GSFTFK
Trigger: TTTAAATGTAAATGACCCCCATTTACCAGACCCTAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTATCAGGTGCTGGAATaGATCTATTTACCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSYQVLE*IYLPFW
Trigger: CCAAAAAGGTAAATAGATCCATTCCAGCACCTGATA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTTATCTCTTATCAGTaGTTTGGCTTTGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFISYQ*FGFVHE
Trigger: CTCATGCACAAAGCCAAACCACTGATAAGAGATAAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGCTTCTCGATTACAGTaGCTGTTTCTTTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSASRLQ*LFLCSI
Trigger: AATAGAACAAAGAAACAGCCACTGTAATCGAGAAGC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCATGACCTCACCATTTTaGTTAAGAACATCAGAATCC +
Preference number: 4 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSMTSPF*LRTSES
Trigger: GGATTCTGATGTTCTTAACCAAAATGGTGAGGTCAT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAAATCTCCAAGCAAATaGGACTTCCATGACCTCACC +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKKSPSK*DFHDLT
Trigger: GGTGAGGTCATGGAAGTCCCATTTGCTTGGAGATTT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp CCTAAAGGATGTTCAAAGCCAGTTCAAGTTTATCCCTaGGGTAACATAACAATTATAAAGCCACATGTCAGG +
Preference number: 4 (lower is better)
Translates to: PKGCSKPVQVYP*GNITIIKPHVR
Trigger: CCTGACATGTGGCTTTATAATTGTTATGTTACCCAAGGGATAAACTTGAACTGGCTTTGAACATCCTTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
3UTR CAA 72 bp CAAGTAATTATTTTCCCTTTGCCATTCAAACCTGCCTaGAGAAATTTCAGGGACTCCCTTATGAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: QVIIFPLPFKPA*RNFRDSLMKKA
Trigger: AGCTTTCTTCATAAGGGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATGGCAAAGGGAAAATAATTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACATCTGACATCCCAATaGCGTGGCTTTGACTATTTT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKHLTSQ*RGFDYF
Trigger: AAAATAGTCAAAGCCACGGCATTGGGATGTCAGATG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAGCTCTGACATTGTATaGCTAATGCAGTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSSDIV*LMQSVS
Trigger: ACTCACTGACTGCATTAGGCATACAATGTCAGAGCT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGTTAGCACTTTAGTCTaGTCATTGAGAATGTTCACT +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQVSTLV*SLRMFT
Trigger: AGTGAACATTCTCAATGACCAGACTAAAGTGCTAAC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTGGGTTGAAATCTTTTaGTTAAAGTCAGAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEWVEIF*LKSEVR
Trigger: TCTCACTTCTGACTTTAACCAAAAGATTTCAACCCA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTCAGTGCACAATTCTaGTGGCATGTAGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKFSAQF*WHVVLL
Trigger: AAGAAGCACTACATGCCACCAGAATTGTGCACTGAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACATCTGCCAGCCATTTaGCTTGTCTATCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKHLPAI*LVYQLL
Trigger: TAAAAGCTGATAGACAAGCCAAATGGCTGGCAGATG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAACTAAGGTTTTGTGGTaGGTTGTTGAACCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKTKVLW*VVEPGK
Trigger: CTTTCCTGGTTCAACAACCCACCACAAAACCTTAGT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGAAATAAAACCTGCTTaGCTCCTTTTGTTGATACAC +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQEIKPA*LLLLIH
Trigger: GTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CCA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACACTTTGATGGATTGTaGGTTTGGCTTATAATCATG +
Preference number: 4 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQHFDGL*VWLIIM
Trigger: CATGATTATAAGCCAAACCCACAATCCATCAAAGTG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTACTTCTAAGTAAGTaGCTAAGCAACACACAGCTT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLLLSK*LSNTQL
Trigger: AAGCTGTGTGTTGCTTAGTCACTTACTTAGAAGTAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACATTGTTTATCTGAATaGTATGGGATAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKHCLSE*YGIGAP
Trigger: AGGAGCACCTATCCCATATCATTCAGATAAACAATG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGTAAGGTTAGTCCTATaGGACCCTTTAATGGTATCT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKVRLVL*DPLMVS
Trigger: AGATACCATTAAAGGGTCTCATAGGACTAACCTTAC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACATATTGCCAGCTTCTaGATTGATTTCCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKHIASF*IDFHSF
Trigger: AAAGGAGTGGAAATCAATGCAGAAGCTGGCAATATG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAACTACTCCATCCTGCTaGTGTAGTGTAAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKTTPSC*CSVKSE
Trigger: TTCTGATTTTACACTACAGCAGCAGGATGGAGTAGT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATCTAGGCATGTGGGGTaGATTTTAAATCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSRHVG*ILNQAD
Trigger: ATCTGCTTGATTTAAAATCCACCCCACATGCCTAGA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR TCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATGTTGTTGGAAGGTTTaGGACTGTTTATTGATGGAT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKCCWKV*DCLLMD
Trigger: ATCCATCAATAAACAGTCTCAAACCTTCCAACAACA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATCCTGCTATATCCAATaGATACCACAAAAACCTCTA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSCYIQ*IPQKPL
Trigger: TAGAGGTTTTTGTGGTATGCATTGGATATAGCAGGA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR GCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATCCTTATCCTTTTCATaGCTAAGATTTCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSLSFS*LRFLGT
Trigger: TGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACAAGATAGCAGAAGTTaGGTGAGCAGTTCAAAATTT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKQDSRS*VSSSKF
Trigger: AAATTTTGAACTGCTCACCCAACTTCTGCTATCTTG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CCA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGGCAACATGGCCCTATaGAATATTAATTATACTGAT +
Preference number: 4 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKGNMAL*NINYTD
Trigger: ATCAGTATAATTAATATTCCATAGGGCCATGTTGCC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS TCA 90 bp CAGGGCGTGCTGAGCAGCTCTGAAGGAGGTGGCCACTCGGCCCGCTaGGTGTGTGCAGGCCCAGCCTGCGCTCAGAAGCTGCCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: QGVLSSSEGGGHSAR*VCAGPACAQKLPQS
Trigger: TGACTGGGGCAGCTTCTGAGCGCAGGCTGGGCCTGCACACACTCAGCGGGCCGAGTGGCCACCTCCTTCAGAGCTGCTCAGCACGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS TCA 90 bp TTCACAAACCGGCCGATGAAAACCGCCCGCGATCCCAGGGCGTGCTaGGCAGCTCTGAAGGAGGTGGCCACTCGGCCCGCTGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: FTNRPMKTARDPRAC*AALKEVATRPAECV
Trigger: CACACACTCAGCGGGCCGAGTGGCCACCTCCTTCAGAGCTGCTCAGCACGCCCTGGGATCGCGGGCGGTTTTCATCGGCCGGTTTGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS CCA 90 bp CAGGCATCGTTTCCGCCAGCCATAAATCCCCACCTTGTATACCTGTaGCCCCACAGAGCCAGGCATGGTGCTCCGGTGGTGAGTGTACTG +
Preference number: 5 (lower is better)
Translates to: QASFPPAINPHLVYL*PHRARHGAPVVSVL
Trigger: CAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTGGGGATTTATGGCTGGCGGAAACGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337851.9
ENST00000435422.7
ENST00000517913.5
ENST00000524347.2
CDS GCA 90 bp AAATCCCCACCTTGTATACCTGTGGCCCCACAGAGCCAGGCATGGTaGTCCGGTGGTGAGTGTACTGCTCCTGAGGCATCATCTCCACCT +
Preference number: 5 (lower is better)
Translates to: KSPPCIPVAPQSQAW*SGGECTAPEASSPP
Trigger: AGGTGGAGATGATGCCTCAGGAGCAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000517913.5
ENST00000524347.2
CDS GCA 90 bp AGGCCCAGCCTGCGCTCAGAAGCTGCCCCAGTCAGATTTTCCAACTaGAGAACTGCAGCCAAGTCCCTGCCCATGCCTGAAGAATTTCCT +
Preference number: 5 (lower is better)
Translates to: RPSLRSEAAPVRFSN*RTAAKSLPMPEEFP
Trigger: AGGAAATTCTTCAGGCATGGGCAGGGACTTGGCTGCAGTTCTGCAGTTGGAAAATCTGACTGGGGCAGCTTCTGAGCGCAGGCTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS CCA 90 bp CATAAATCCCCACCTTGTATACCTGTGGCCCCACAGAGCCAGGCATaGTGCTCCGGTGGTGAGTGTACTGCTCCTGAGGCATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: HKSPPCIPVAPQSQA*CSGGECTAPEASSP
Trigger: TGGAGATGATGCCTCAGGAGCAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTGGGGATTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000517913.5
ENST00000524347.2
CDS GCA 90 bp AGCTATCAATGGGAAACACATGTGTCAAGCACAGGCCGACTCCCCTaGAACAGCGCTCATGGTGTCTGCCGGGCTCATACTCACAACCAG +
Preference number: 5 (lower is better)
Translates to: SYQWETHVSSTGRLP*NSAHGVCRAHTHNQ
Trigger: CTGGTTGTGAGTATGAGCCCGGCAGACACCATGAGCGCTGTTGCAGGGGAGTCGGCCTGTGCTTGACACATGTGTTTCCCATTGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS TCA 90 bp CTCAGGTTTCCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTaGGTCACCTGGCTCCTGGTTCTGGCTCCTCTCAGCTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: LRFPIPSSSKVGTGI*VTWLLVLAPLSSFH
Trigger: GTGGAATGAGCTGAGAGGAGCCAGAACCAGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGGAAACCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATGGACCCCAACCTCTTaGCTGCTGTGGCCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPAWTPTS*LLWPSK
Trigger: CTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCCA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS CCA 90 bp AACACATGTGTCAAGCACAGGCCGACTCCCCTGCAACAGCGCTCATaGTGTCTGCCGGGCTCATACTCACAACCAGAAAGAAAACTGCTT +
Preference number: 5 (lower is better)
Translates to: NTCVKHRPTPLQQRS*CLPGSYSQPERKLL
Trigger: AAGCAGTTTTCTTTCTGGTTGTGAGTATGAGCCCGGCAGACACCATGAGCGCTGTTGCAGGGGAGTCGGCCTGTGCTTGACACATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCTTGCTGGGCTGAAGTaGAGGAGCAGCAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLAGLK*RSSSEH
Trigger: GTGCTCACTGCTGCTCCTCAACTTCAGCCCAGCAAG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACAAAGGTCTCAGAGCTaGAGTGCGACTGAGATTCCC +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPAQRSQS*SATEIP
Trigger: GGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTTG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTTGCTGGGCTGAAGTaGAGGAGCAGCAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLAGLK*RSSSEH
Trigger: GTGCTCACTGCTGCTCCTCAACTTCAGCCCAGCAAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCTGGGGCTGAGTCTTTaGGGTATGGTGAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLGLSL*GMVRSS
Trigger: AGAGCTCCTCACCATACCCAAAAGACTCAGCCCCAG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCATCCAACCTTAGTTCTTaGAAGGGGTCTGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPASNLSS*KGSALT
Trigger: TGTCAGGGCAGACCCCTTCAAAGAACTAAGGTTGGA...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAAGACATATCACCCGTTaGTTCATTGCCCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPARHITR*FIAHQA
Trigger: GGCCTGATGGGCAATGAACAAACGGGTGATATGTCT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS GCA 90 bp CTGCCCCAGTCAGATTTTCCAACTGCAGAACTGCAGCCAAGTCCCTaGCCATGCCTGAAGAATTTCCTGAACAGCATTCCCGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LPQSDFPTAELQPSP*PCLKNFLNSIPVLF
Trigger: AAAAAGAACGGGAATGCTGTTCAGGAAATTCTTCAGGCATGGGCAGGGACTTGGCTGCAGTTCTGCAGTTGGAAAATCTGACTGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTCCAACCTTAGTTCTTaGAAGGGGTCTGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSNLSS*KGSALT
Trigger: TGTCAGGGCAGACCCCTTCAAAGAACTAAGGTTGGA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAGCACAGTGGCGGTGTaGATAACTGACGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLSTVAV*ITDVMW
Trigger: CCACATCACGTCAGTTATCAACACCGCCACTGTGCT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCCCTCAGACAATCCTTaGGCTACAAGTGTTCCCATG +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMPSDNP*ATSVPM
Trigger: CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCTGACTTCTACAGCATaGCCAGTTCCTAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMLTSTA*PVPSLK
Trigger: CTTCAAGCTAGGAACTGGCAATGCTGTAGAAGTCAG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTCACCCGTTTGTTCATaGCCCATCAGGCCATTAAGT +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSPVCS*PIRPLS
Trigger: ACTTAATGGCCTGATGGGCAATGAACAAACGGGTGA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCCCTCAGACAATCCTTaGGCTACAAGTGTTCCCATG +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLPSDNP*ATSVPM
Trigger: CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCACCACCAAACCTCATaGCTGAATCTAGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLHHQTS*LNLGCQ
Trigger: CTGGCATCCTAGATTCAGCAATGAGGTTTGGTGGTG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTGGACCCCAACCTCTTaGCTGCTGTGGCCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNWTPTS*LLWPSK
Trigger: CTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCCA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGAGGTTTTGTGGTGGGTaGTTGAACCAGGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMRFCGG*LNQEST
Trigger: AGTGCTTTCCTGGTTCAACAACCCACCACAAAACCT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS TCA 90 bp TCAACCAGTTATGGGAAGGGTTGGCCTGTTGAAGCTGTAGCTCTTTaGACTTCTGTCCTTCTCATCCCTCACCTCTCCATCTTTGGATTC +
Preference number: 5 (lower is better)
Translates to: STSYGKGWPVEAVAL*TSVLLIPHLSIFGF
Trigger: GAATCCAAAGATGGAGAGGTGAGGGATGAGAAGGACAGAAGTTCAAAGAGCTACAGCTTCAACAGGCCAACCCTTCCCATAACTGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS CCA 90 bp TACTCCGTACTTCAATATGGCTTTGTCAGACCGACTCACAGCTACTaGGCTGTCTCCAGCTATCAATGGGAAACACATGTGTCAAGCACA +
Preference number: 5 (lower is better)
Translates to: YSVLQYGFVRPTHSY*AVSSYQWETHVSST
Trigger: TGTGCTTGACACATGTGTTTCCCATTGATAGCTGGAGACAGCCCAGTAGCTGTGAGTCGGTCTGACAAAGCCATATTGAAGTACGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS CCA 90 bp CGTTCTTTTTCTGACTGCTTTGAAACCGTACTCCGTACTTCAATATaGCTTTGTCAGACCGACTCACAGCTACTGGGCTGTCTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: RSFSDCFETVLRTSI*LCQTDSQLLGCLQL
Trigger: TAGCTGGAGACAGCCCAGTAGCTGTGAGTCGGTCTGACAAAGCCATATTGAAGTACGGAGTACGGTTTCAAAGCAGTCAGAAAAAGAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTCACCCGTTTGTTCATaGCCCATCAGGCCATTAAGT +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQSPVCS*PIRPLS
Trigger: ACTTAATGGCCTGATGGGCAATGAACAAACGGGTGA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCACTGCTCTTAGGGATTTaGATTGACCTGATCATTGTG +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPALLLGI*IDLIIV
Trigger: CACAATGATCAGGTCAATCAAAATCCCTAAGAGCAG...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAGGGCGTTTCCTGGCTaGGAAAAACCCTGTATTGAT +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQRAFPG*EKPCID
Trigger: ATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGAAACAGATTCTAAGGTaGAACCACAGGGTCCCCTAC +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQKQILR*NHRVPY
Trigger: GTAGGGGACCCTGTGGTTCAACCTTAGAATCTGTTT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGCCATTCAAACCTGCCTaGAGAAATTTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQPFKPA*RNFRDS
Trigger: GGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATGG...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTACTTAATGAGGCATTaGGAACCCCACTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLYLMRH*EPHSGF
Trigger: GAAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGAAACACTGTCTTCCTaGTTGACAAGTGTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMETLSS*LTSVVF
Trigger: GAAGACGACACTTGTCAACAAGGAAGACAGTGTTTC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGACTGGGGGAGGTGGTaGATACATGAAAAACTTTAT +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPADWGRW*IHEKLY
Trigger: ATAAAGTTTTTCATGTATCAACCACCTCCCCCAGTC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CCTTCTAGCTTTAGACCTTTTTCTGTGATCCTCAGGTTTCCCATTCCATCCAGCAGTAATGTCTCTCTCTaGTCCGTTTCACAAACCGGC +
Preference number: 5 (lower is better)
Translates to: PSSFRPFSVILRFPIPSSSNVSL*SVSQTG
Trigger: GCCGGTTTGTGAAACGGACAAGAGAGAGACATTACT...GCTGGATGGAATGGGAAACCTGAGGATCACAGAAAAAGGTCTAAAGCTAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTTCAGAGGCAGACACTaGTGTTTATCTGACAAGTGG +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLFRGRH*CLSDKW
Trigger: CCACTTGTCAGATAAACACAAGTGTCTGCCTCTGAA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCACATTTCCCCCTCTTaGAACAGAGATGGTGTAATC +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLHISPS*NRDGVI
Trigger: GATTACACCATCTCTGTTCAAAGAGGGGGAAATGTG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTCTTACTCCCTGCTGTTaGGAAATGTGCTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLLTPCC*EMCFLS
Trigger: GGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAG...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGATCAGTGGTTTGGCTTaGTGCATGAGAAATTCAGAG +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMISGLA*CMRNSE
Trigger: CTCTGAATTTCTCATGCACAAAGCCAAACCACTGAT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATGTGTGAGCATGAGTaGCCCCAAAAAGGTTATTTT +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPAMCEHE*PQKGYF
Trigger: AAAATAACCTTTTTGGGGCAACTCATGCTCACACAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGACATCACACTTACTATaGCATCAAGGGCTCATGACA +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMTSHLL*HQGLMT
Trigger: TGTCATGAGCCCTTGATGCAATAGTAAGTGTGATGT...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAATAGATTGGCTCAGATaGTCAAAAGAATCTATGGCC +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPAIDWLR*SKESMA
Trigger: GGCCATAGATTCTTTTGACAATCTGAGCCAATCTAT...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCTGGGGCTGAGTCTTTaGGGTATGGTGAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLGLSL*GMVRSS
Trigger: AGAGCTCCTCACCATACCCAAAAGACTCAGCCCCAG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGTATCTATTCCTGGCTaGCCATTTGGATGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPAVSIPG*PFGCLK
Trigger: TTTAAGACATCCAAATGGCAAGCCAGGAATAGATAC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCCTGAGGCATCTCTCTaGTCCGTTTCACAAACCGGC +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEPEASL*SVSQTG
Trigger: GCCGGTTTGTGAAACGGACAAGAGAGATGCCTCAGG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGGTGAAGTTCATGACTTaGAGAATCCAGATGGTCATG +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQVKFMT*RIQMVM
Trigger: CATGACCATCTGGATTCTCAAAGTCATGAACTTCAC...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTCACTAGAGACCGGGTaGGGGACTCCAACCTTAGTT +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSSLETG*GTPTLV
Trigger: AACTAAGGTTGGAGTCCCCAACCCGGTCTCTAGTGA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAGGAATAATCTCCCATaGGCGCAGACGCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSRNNLP*AQTQIS
Trigger: CGAGATCTGCGTCTGCGCCAATGGGAGATTATTCCT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTGCCAGTTCCTAGCTaGAAGAGGGGGAAGTTAGCC +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLPVPS*KRGKLA
Trigger: GGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTAATAAAGGGCATGTTTaGACATTTCCCACCAATCCC +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLNKGHV*TFPTNP
Trigger: GGGATTGGTGGGAAATGTCAAAACATGCCCTTTATT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTTCCAGGTCATAGTTaGCCCACCTCTGCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFPGHS*PTSALG
Trigger: CCCTAGAGCAGAGGTGGGCAAACTATGACCTGGAAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTTTAATGGAAATATGTaGGAACTAGGGGAACCTTCC +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMFNGNM*ELGEPS
Trigger: GGAAGGTTCCCCTAGTTCCAACATATTTCCATTAAA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTCTCTTATCAGTGGTTaGGCTTTGTGCATGAGAAAT +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMSLISG*ALCMRN
Trigger: ATTTCTCATGCACAAAGCCAAACCACTGATAAGAGA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp CATGAGATATTGAACAAGAGTGCTTGGAGTGAGTCTGGGGTCTGGACGCCAGCAGAGAAGTTTCATAGATaGGCTCAGATTGTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: HEILNKSAWSESGVWTPAEKFHR*AQIVKR
Trigger: TCTTTTGACAATCTGAGCCAATCTATGAAACTTCTC...TGCTGGCGTCCAGACCCCAGACTCACTCCAAGCACTCTTGTTCAATATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTGGTTTCTAATCTTTTaGCATGATCCCTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLWFLIF*HDPWLS
Trigger: ACTCAGCCAGGGATCATGCAAAAAGATTAGAAACCA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTTTGTGGTGGGTTGTaGAACCAGGAAAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFCGGL*NQESTG
Trigger: GCCAGTGCTTTCCTGGTTCAACAACCCACCACAAAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGCATGACCTCACCATTTaGGTTAAGAACATCAGAATC +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMHDLTI*VKNIRI
Trigger: GATTCTGATGTTCTTAACCAAAATGGTGAGGTCATG...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAATCACTAGAGACCGGGTaGGGGACTCCAACCTTAGTT +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQSLETG*GTPTLV
Trigger: AACTAAGGTTGGAGTCCCCAACCCGGTCTCTAGTGA...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCTACTTCATTTAGGCTaGCAGGGCCACTACTTTCCA +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLLHLG*QGHYFP
Trigger: TGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTGGAAAAACCCTGTATaGATACATACAGATTCTGGC +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQWKNPV*IHTDSG
Trigger: GCCAGAATCTGTATGTATCAATACAGGGTTTTTCCA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGGTTCCCAATAGGTACTaGATTTATATGGTTGATTGC +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMVPNRY*IYMVDC
Trigger: GCAATCAACCATATAAATCAAGTACCTATTGGGAAC...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACAAGTGTCGTCTTCCTGCCCTCAGACAATCCTTTGGCTACAAGTGTTCCCATGTATCAATTAAGGGTCTaGGAGGATCATAACTTTCCT +
Preference number: 5 (lower is better)
Translates to: TSVVFLPSDNPLATSVPMYQLRV*EDHNFP
Trigger: AGGAAAGTTATGATCCTCCAAGACCCTTAATTGATA...CATGGGAACACTTGTAGCCAAAGGATTGTCTGAGGGCAGGAAGACGACACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGATGTGTGAGCATGAGTaGCCCCAAAAAGGTTATTTT +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQMCEHE*PQKGYF
Trigger: AAAATAACCTTTTTGGGGCAACTCATGCTCACACAT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCACCACCAAACCTCATaGCTGAATCTAGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSHHQTS*LNLGCQ
Trigger: CTGGCATCCTAGATTCAGCAATGAGGTTTGGTGGTG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTGTATCTATTCCTGGCTaGCCATTTGGATGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLVSIPG*PFGCLK
Trigger: TTTAAGACATCCAAATGGCAAGCCAGGAATAGATAC...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS TCA 90 bp GCTCATACTCACAACCAGAAAGAAAACTGCTTCTACAACCAATTCTaGTTTTTCAGCCATTCTCCACACAGCCTCTGCTCTGTAGTGCTA +
Preference number: 5 (lower is better)
Translates to: AHTHNQKENCFYNQF*FFSHSPHSLCSVVL
Trigger: TAGCACTACAGAGCAGAGGCTGTGTGGAGAATGGCTGAAAAATCAGAATTGGTTGTAGAAGCAGTTTTCTTTCTGGTTGTGAGTATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTACTTTAGTCTGGTCATaGAGAATGTTCACTGTAACA +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLTLVWS*RMFTVT
Trigger: TGTTACAGTGAACATTCTCAATGACCAGACTAAAGT...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAATCCAACCTTAGTTCTTaGAAGGGGTCTGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQSNLSS*KGSALT
Trigger: TGTCAGGGCAGACCCCTTCAAAGAACTAAGGTTGGA...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGATCAAATGCCTATTTTaGATACAAAGGTCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQIKCLF*IQRSQS
Trigger: GCTCTGAGACCTTTGTATCAAAAATAGGCATTTGAT...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTCATCTGCCAGCCATTaGGCTTGTCTATCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNSSASH*ACLSAF
Trigger: AAAAGCTGATAGACAAGCCAAATGGCTGGCAGATGA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCTTACTCCCTGCTGTTaGGAAATGTGCTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNLTPCC*EMCFLS
Trigger: GGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACTAGTGAGGCTGTCCACATACTTAATGAGGCATTTGGAACCCCACTCTGGCTTTATCAATTAAGGGTCTaGGAGGATCATAACTTTCCT +
Preference number: 5 (lower is better)
Translates to: TSEAVHILNEAFGTPLWLYQLRV*EDHNFP
Trigger: AGGAAAGTTATGATCCTCCAAGACCCTTAATTGATA...AAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTATGTGGACAGCCTCACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCCATTCAAACCTGCCTaGAGAAATTTCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSPFKPA*RNFRDS
Trigger: GGAGTCCCTGAAATTTCTCAAGGCAGGTTTGAATGG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTACTTAATGAGGCATTaGGAACCCCACTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSYLMRH*EPHSGF
Trigger: GAAGCCAGAGTGGGGTTCCAAATGCCTCATTAAGTA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGACACTGTCTTCCTTGTaGACAAGTGTCGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLETLSSL*TSVVFL
Trigger: CAGGAAGACGACACTTGTCAACAAGGAAGACAGTGT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCACACTGTCTTCCTTGTaGACAAGTGTCGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSTLSSL*TSVVFL
Trigger: CAGGAAGACGACACTTGTCAACAAGGAAGACAGTGT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp ACATTACAGGACCAGAGTGGTCAGCTCAGCTCTGACATTGTATGCCTAATGCAGTATTTGATCGCTTCCTaGAGTTTTGCCACAAGTAAA +
Preference number: 5 (lower is better)
Translates to: TLQDQSGQLSSDIVCLMQYLIAS*SFATSK
Trigger: TTTACTTGTGGCAAAACTCAAGGAAGCGATCAAATA...CTGCATTAGGCATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGAGGTTTTGTGGTGGGTaGTTGAACCAGGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLERFCGG*LNQEST
Trigger: AGTGCTTTCCTGGTTCAACAACCCACCACAAAACCT...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACCCAGAAGAGCAGTCTaGGATCTCCTGTTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQPRRAV*DLLFLV
Trigger: CACTAAGAACAGGAGATCCAAGACTGCTCTTCTGGG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACTCACCTCTCCATCTTaGGATTCCAGTCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQLTSPS*DSSLSS
Trigger: AGAGCTGAGACTGGAATCCAAAGATGGAGAGGTGAG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCACATTTCTGGCAGACTaGAAGTACAGGGCATTACCT +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSTFLAD*KYRALP
Trigger: AGGTAATGCCCTGTACTTCAAGTCTGCCAGAAATGT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATCACTAGAGACCGGGTaGGGGACTCCAACCTTAGTT +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSLETG*GTPTLV
Trigger: AACTAAGGTTGGAGTCCCCAACCCGGTCTCTAGTGA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAGGAATAATCTCCCATaGGCGCAGACGCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKRNNLP*AQTQIS
Trigger: CGAGATCTGCGTCTGCGCCAATGGGAGATTATTCCT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGAAATCACATTGCTTTaGAAAGTGCGAGCGTGTGTG +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEEITLL*KVRACV
Trigger: CACACACGCTCGCACTTTCAAAAGCAATGTGATTTC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGAAACACTGTCTTCCTaGTTGACAAGTGTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSETLSS*LTSVVF
Trigger: GAAGACGACACTTGTCAACAAGGAAGACAGTGTTTC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACCCTTTTACTAAGGTTTaGTGGTGGGTTGTTGAACCA +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNPFTKV*WWVVEP
Trigger: TGGTTCAACAACCCACCACAAAACCTTAGTAAAAGG...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGACTGGGGGAGGTGGTaGATACATGAAAAACTTTAT +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNDWGRW*IHEKLY
Trigger: ATAAAGTTTTTCATGTATCAACCACCTCCCCCAGTC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AATTCAGAGTCTCCTTCTAGCTTTAGACCTTTTTCTGTGATCCTCAGGTTTCCCCTTTTTCTGACTGCTTaGAAACCGTACTCCGTACTT +
Preference number: 5 (lower is better)
Translates to: NSESPSSFRPFSVILRFPLFLTA*KPYSVL
Trigger: AAGTACGGAGTACGGTTTCAAAGCAGTCAGAAAAAG...GGGAAACCTGAGGATCACAGAAAAAGGTCTAAAGCTAGAAGGAGACTCTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACCTGCTTGGCTCCTTTaGTTGATACACTGTAGGATC +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQPAWLL*LIHCRI
Trigger: GATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCGTGAAGTTCATGACTTaGAGAATCCAGATGGTCATG +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSVKFMT*RIQMVM
Trigger: CATGACCATCTGGATTCTCAAAGTCATGAACTTCAC...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAACATTTCTGGCAGACTaGAAGTACAGGGCATTACCT +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQTFLAD*KYRALP
Trigger: AGGTAATGCCCTGTACTTCAAGTCTGCCAGAAATGT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTAATCTCTCCATCTTaGGATTCCAGTCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSLISPS*DSSLSS
Trigger: AGAGCTGAGACTGGAATCCAAAGATGGAGAGATTAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTTCTGCATGAGATATaGAACAAGAGTGCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELLHEI*NKSAWS
Trigger: ACTCCAAGCACTCTTGTTCAATATCTCATGCAGAAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACTTTAATGGAAATATGTaGGAACTAGGGGAACCTTCC +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNFNGNM*ELGEPS
Trigger: GGAAGGTTCCCCTAGTTCCAACATATTTCCATTAAA...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCACATCACACTTACTATaGCATCAAGGGCTCATGACA +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSTSHLL*HQGLMT
Trigger: TGTCATGAGCCCTTGATGCAATAGTAAGTGTGATGT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACATAGATTGGCTCAGATaGTCAAAAGAATCTATGGCC +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNIDWLR*SKESMA
Trigger: GGCCATAGATTCTTTTGACAATCTGAGCCAATCTAT...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTGGTTTCTAATCTTTTaGCATGATCCCTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSWFLIF*HDPWLS
Trigger: ACTCAGCCAGGGATCATGCAAAAAGATTAGAAACCA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAATGCTCAAGAAGAAATaGGGGGACCACTCACTGATA +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQMLKKK*GDHSLI
Trigger: TATCAGTGAGTGGTCCCCCAATTTCTTCTTGAGCAT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGCTTGGCTCCTTTTGTaGATACACTGTAGGATCCAA +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQAWLLL*IHCRIQ
Trigger: TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAAGTAATGTCTCTCTCTaGTCCGTTTCACAAACCGGC +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSNVSL*SVSQTG
Trigger: GCCGGTTTGTGAAACGGACAAGAGAGAGACATTACT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337851.9
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAGTGAAGTTCATGACTTaGAGAATCCAGATGGTCATG +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQVKFMT*RIQMVM
Trigger: CATGACCATCTGGATTCTCAAAGTCATGAACTTCAC...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCTTTACAGCTCCTAATTaGACTGTAGGAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSFTAPN*TVGESV
Trigger: CACAGATTCTCCTACAGTCAAATTAGGAGCTGTAAA...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp AAGGAACTTCAGATGCACTCATTTTCTCCCTTCCTAGTTGAAACACCACCAAACGTTCCCAATAGGTACTaGATTTATATGGTTGATTGC +
Preference number: 5 (lower is better)
Translates to: KELQMHSFSPFLVETPPNVPNRY*IYMVDC
Trigger: GCAATCAACCATATAAATCAAGTACCTATTGGGAAC...GTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGGTAATTATTTTCCCTTaGCCATTCAAACCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEVIIFP*PFKPAL
Trigger: CAAGGCAGGTTTGAATGGCAAAGGGAAAATAATTAC...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGCTGTTGTTGGAAGGTTaGAGACTGTTTATTGATGGA +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLELLLEG*RLFIDG
Trigger: TCCATCAATAAACAGTCTCAAACCTTCCAACAACAG...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCCATGACCTCACCATTTaGGTTAAGAACATCAGAATC +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSHDLTI*VKNIRI
Trigger: GATTCTGATGTTCTTAACCAAAATGGTGAGGTCATG...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAACATTTCTGGCAGACTaGAAGTACAGGGCATTACCT +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKTFLAD*KYRALP
Trigger: AGGTAATGCCCTGTACTTCAAGTCTGCCAGAAATGT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACACATTTCCCCCTCTTaGAACAGAGATGGTGTAATC +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKHISPS*NRDGVI
Trigger: GATTACACCATCTCTGTTCAAAGAGGGGGAAATGTG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATCATCTGCCAGCCATTaGGCTTGTCTATCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKSSASH*ACLSAF
Trigger: AAAAGCTGATAGACAAGCCAAATGGCTGGCAGATGA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCCTTGAAAAATCAGTATCAGGTGCTGGAATGGATCTATTTACCTTTTTGGTCCAACCTTAAGCAAACTTaGGTCTATAGTTGCTGGATA +
Preference number: 5 (lower is better)
Translates to: ALKNQYQVLEWIYLPFWSNLKQT*VYSCWI
Trigger: TATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTT...GGACCAAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GAAACAGAGACAATGATAGAAATGAGCTTCCCTCTATTTGATCGCTTCCTTGAGTATTTGATCGCTTCCTaGAGTTTTGCCACAAGTAAA +
Preference number: 5 (lower is better)
Translates to: ETETMIEMSFPLFDRFLEYLIAS*SFATSK
Trigger: TTTACTTGTGGCAAAACTCAAGGAAGCGATCAAATA...CTCAAGGAAGCGATCAAATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAAATTTCAGGGCAACATaGGGATTAAGAAAATCCCCT +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQNFRAT*GLRKSP
Trigger: AGGGGATTTTCTTAATCCCAATGTTGCCCTGAAATT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAACATCACTTTGATGGATaGTGGGTTTGGCTTATAATC +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQHHFDG*WVWLII
Trigger: GATTATAAGCCAAACCCACAATCCATCAAAGTGATG...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAACTTTAGTCTGGTCATaGAGAATGTTCACTGTAACA +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQTLVWS*RMFTVT
Trigger: TGTTACAGTGAACATTCTCAATGACCAGACTAAAGT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTAATCTCTCCATCTTaGGATTCCAGTCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLISPS*DSSLSS
Trigger: AGAGCTGAGACTGGAATCCAAAGATGGAGAGATTAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAACAGTGGCTGTTTCTTaGTTCTATTCCACCTGCATA +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKTVAVS*FYSTCI
Trigger: TATGCAGGTGGAATAGAACAAAGAAACAGCCACTGT...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACCTTTTACTAAGGTTTaGTGGTGGGTTGTTGAACCA +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKPFTKV*WWVVEP
Trigger: TGGTTCAACAACCCACCACAAAACCTTAGTAAAAGG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAACTTTTTCTGACTGCTTaGAAACCGTACTCCGTACTT +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKLFLTA*KPYSVL
Trigger: AAGTACGGAGTACGGTTTCAAAGCAGTCAGAAAAAG...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS-3UTR CAA 90 bp GTTTCAGAAATAAAACCTGCTTGGCTCCTTTTGTTGATACACTGTAGGATCCAAAGAAATAAAACCTGCTaGGCTCCTTTTGTTGATACA +
Preference number: 5 (lower is better)
Translates to: VSEIKPAWLLLLIHCRIQRNKTC*APFVDT
Trigger: TGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCT...TTGGATCCTACAGTGTATCAACAAAAGGAGCCAAGCAGGTTTTATTTCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAATTTACAGCTCCTAATTaGACTGTAGGAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKFTAPN*TVGESV
Trigger: CACAGATTCTCCTACAGTCAAATTAGGAGCTGTAAA...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS-3UTR CAA 90 bp GCTCTTTCTCAAATAAGGATGCTCATTTCCTCCTATTCTGTCAATATCTACAAAGAGAAGTTTCATAGATaGGCTCAGATTGTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: ALSQIRMLISSYSVNIYKEKFHR*AQIVKR
Trigger: TCTTTTGACAATCTGAGCCAATCTATGAAACTTCTC...TTTGTAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000435422.7
CDS TCA 72 bp CGGCCGATGAAAACCGCCCGCGATCCCAGGGCGTGCTaGGCAGCTCTGAAGGAGGTGGCCACTCGGCCCGCT +
Preference number: 6 (lower is better)
Translates to: RPMKTARDPRAC*AALKEVATRPA
Trigger: AGCGGGCCGAGTGGCCACCTCCTTCAGAGCTGCTCAGCACGCCCTGGGATCGCGGGCGGTTTTCATCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS TCA 72 bp AAACCGCCCGCGATCCCAGGGCGTGCTGAGCAGCTCTaGAGGAGGTGGCCACTCGGCCCGCTGAGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: KPPAIPGRAEQL*RRWPLGPLSVC
Trigger: GCACACACTCAGCGGGCCGAGTGGCCACCTCCTTCAGAGCTGCTCAGCACGCCCTGGGATCGCGGGCGGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS TCA 72 bp CTGAGCAGCTCTGAAGGAGGTGGCCACTCGGCCCGCTaGGTGTGTGCAGGCCCAGCCTGCGCTCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSEGGGHSAR*VCAGPACAQKL
Trigger: CAGCTTCTGAGCGCAGGCTGGGCCTGCACACACTCAGCGGGCCGAGTGGCCACCTCCTTCAGAGCTGCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS TCA 72 bp GAGGCATCTCTCTTGTCCGTTTCACAAACCGGCCGATaGAAACCGCCCGCGATCCCAGGGCGTGCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: EASLLSVSQTGR*KPPAIPGRAEQ
Trigger: CTGCTCAGCACGCCCTGGGATCGCGGGCGGTTTTCATCGGCCGGTTTGTGAAACGGACAAGAGAGATGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS CCA 72 bp CCACCTTGTATACCTGTGGCCCCACAGAGCCAGGCATaGTGCTCCGGTGGTGAGTGTACTGCTCCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: PPCIPVAPQSQA*CSGGECTAPEA
Trigger: TGCCTCAGGAGCAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337851.9
ENST00000435422.7
ENST00000517913.5
ENST00000524347.2
CDS GCA 72 bp CCTTGTATACCTGTGGCCCCACAGAGCCAGGCATGGTaGTCCGGTGGTGAGTGTACTGCTCCTGAGGCATCA +
Preference number: 6 (lower is better)
Translates to: PCIPVAPQSQAW*SGGECTAPEAS
Trigger: TGATGCCTCAGGAGCAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000517913.5
ENST00000524347.2
CDS GCA 72 bp CCTTGTATACCTGTGGCCCCACAGAGCCAGGCATGGTaGTCCGGTGGTGAGTGTACTGCTCCTGAGGCATCT +
Preference number: 6 (lower is better)
Translates to: PCIPVAPQSQAW*SGGECTAPEAS
Trigger: AGATGCCTCAGGAGCAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS TCA 72 bp AATGTCTCTCTCTTGTCCGTTTCACAAACCGGCCGATaGAAACCGCCCGCGATCCCAGGGCGTGCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: NVSLLSVSQTGR*KPPAIPGRAEQ
Trigger: CTGCTCAGCACGCCCTGGGATCGCGGGCGGTTTTCATCGGCCGGTTTGTGAAACGGACAAGAGAGAGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337851.9
ENST00000524347.2
CDS GCA 72 bp TGGGAAACACATGTGTCAAGCACAGGCCGACTCCCCTaGAACAGCGCTCATGGTGTCTGCCGGGCTCATACT +
Preference number: 6 (lower is better)
Translates to: WETHVSSTGRLP*NSAHGVCRAHT
Trigger: AGTATGAGCCCGGCAGACACCATGAGCGCTGTTGCAGGGGAGTCGGCCTGTGCTTGACACATGTGTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS CCA 72 bp GTCAAGCACAGGCCGACTCCCCTGCAACAGCGCTCATaGTGTCTGCCGGGCTCATACTCACAACCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: VKHRPTPLQQRS*CLPGSYSQPER
Trigger: TCTTTCTGGTTGTGAGTATGAGCCCGGCAGACACCATGAGCGCTGTTGCAGGGGAGTCGGCCTGTGCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS TCA 72 bp CCCATTCCATCCAGCAGCAAAGTGGGTACTGGAATCTaGGTCACCTGGCTCCTGGTTCTGGCTCCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: PIPSSSKVGTGI*VTWLLVLAPLS
Trigger: GCTGAGAGGAGCCAGAACCAGGAGCCAGGTGACTCAGATTCCAGTACCCACTTTGCTGCTGGATGGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524347.2
CDS GCA 72 bp CTGCGCTCAGAAGCTGCCCCAGTCAGATTTTCCAACTaGAGAACTGCAGCCAAGTCCCTGCCCATGCCTGAA +
Preference number: 6 (lower is better)
Translates to: LRSEAAPVRFSN*RTAAKSLPMPE
Trigger: TTCAGGCATGGGCAGGGACTTGGCTGCAGTTCTGCAGTTGGAAAATCTGACTGGGGCAGCTTCTGAGCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435422.7
ENST00000524347.2
CDS GCA 72 bp CTCTGTCCTGCAGGTGGCTTCCATATTGCCAGCTTCTaGATTGATTTCCACTCCTTTTGGGGCCTCCATCAC +
Preference number: 6 (lower is better)
Translates to: LCPAGGFHIASF*IDFHSFWGLHH
Trigger: GTGATGGAGGCCCCAAAAGGAGTGGAAATCAATGCAGAAGCTGGCAATATGGAAGCCACCTGCAGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000435422.7
ENST00000517913.5
CDS TCA 72 bp TATGGGAAGGGTTGGCCTGTTGAAGCTGTAGCTCTTTaGACTTCTGTCCTTCTCATCCCTCACCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: YGKGWPVEAVAL*TSVLLIPHLSI
Trigger: GATGGAGAGGTGAGGGATGAGAAGGACAGAAGTTCAAAGAGCTACAGCTTCAACAGGCCAACCCTTCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS CCA 72 bp CTTCAATATGGCTTTGTCAGACCGACTCACAGCTACTaGGCTGTCTCCAGCTATCAATGGGAAACACATGTG +
Preference number: 6 (lower is better)
Translates to: LQYGFVRPTHSY*AVSSYQWETHV
Trigger: CACATGTGTTTCCCATTGATAGCTGGAGACAGCCCAGTAGCTGTGAGTCGGTCTGACAAAGCCATATTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS CCA 72 bp TCTGACTGCTTTGAAACCGTACTCCGTACTTCAATATaGCTTTGTCAGACCGACTCACAGCTACTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: SDCFETVLRTSI*LCQTDSQLLGC
Trigger: ACAGCCCAGTAGCTGTGAGTCGGTCTGACAAAGCCATATTGAAGTACGGAGTACGGTTTCAAAGCAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435422.7
CDS TCA 72 bp CATCGATGCTCAAGAAGAAATTGGGGGACCACTCACTaGTACTGTGACCCTCCCAGCTTCAATAGATATCAC +
Preference number: 6 (lower is better)
Translates to: HRCSRRNWGTTH*YCDPPSFNRYH
Trigger: GTGATATCTATTGAAGCTGGGAGGGTCACAGTATCAGTGAGTGGTCCCCCAATTTCTTCTTGAGCATCGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS CCA 72 bp AGTACAGGGCATTACCTGGTCGGGACTGGATTTCTTTaGCGTAGAGAGGTTGTAAGAATTCAGAGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: STGHYLVGTGFL*RREVVRIQSLL
Trigger: AAGGAGACTCTGAATTCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCCGACCAGGTAATGCCCTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000435422.7
ENST00000517913.5
CDS CAA 72 bp AGGTTTCTTCCAAGTCTCATCCCCAGAAGAGCAGTCTaGGATCTCCTGTTCTTAGTGACACATGAAGTCAGA +
Preference number: 6 (lower is better)
Translates to: RFLPSLIPRRAV*DLLFLVTHEVR
Trigger: TCTGACTTCATGTGTCACTAAGAACAGGAGATCCAAGACTGCTCTTCTGGGGATGAGACTTGGAAGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS CAA 72 bp TCATTGAGAATGTTCACTGTAACATTTCTGGCAGACTaGAAGTACAGGGCATTACCTGGTCGGGACTGGATT +
Preference number: 6 (lower is better)
Translates to: SLRMFTVTFLAD*KYRALPGRDWI
Trigger: AATCCAGTCCCGACCAGGTAATGCCCTGTACTTCAAGTCTGCCAGAAATGTTACAGTGAACATTCTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000435422.7
ENST00000517913.5
CDS TCA 72 bp AAGAGCAGTCTTGGATCTCCTGTTCTTAGTGACACATaGAGTCAGATCCACAATATTACACCACTGCTAATT +
Preference number: 6 (lower is better)
Translates to: KSSLGSPVLSDT*SQIHNITPLLI
Trigger: AATTAGCAGTGGTGTAATATTGTGGATCTGACTTCATGTGTCACTAAGAACAGGAGATCCAAGACTGCTCTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517913.5
CDS CAA 72 bp ACTCGTAATCTTTCAGCTCCTACTACCACTTCATTATaGTCTGCAGAGAAGAGCAATTTTCCAGAAACAGTT +
Preference number: 6 (lower is better)
Translates to: TRNLSAPTTTSL*SAEKSNFPETV
Trigger: AACTGTTTCTGGAAAATTGCTCTTCTCTGCAGACAATAATGAAGTGGTAGTAGGAGCTGAAAGATTACGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337851.9
ENST00000435422.7
ENST00000517913.5