RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFXN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000144040

Ensembl transcript IDs: ENST00000272433.7, ENST00000410065.5, ENST00000411783.5, ENST00000416579.5, ENST00000442582.1, ENST00000450185.5, ENST00000461352.5, ENST00000463277.5, ENST00000464825.5, ENST00000472259.5, ENST00000474528.5, ENST00000479293.5, ENST00000482289.5, ENST00000482542.5, ENST00000484123.1, ENST00000490056.5, ENST00000495208.5, ENST00000497144.5

Found 591 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAGTGGCAGGCCCCTCAGGGCAATGTGCTGCAGAGCCAGCTGGTaGGCACCAGCGGCTGGCAGAGAGGCAACGGCCATGCCCATGGAA +
Preference number: 1 (lower is better)
Translates to: ESGRPLRAMCCRASW*APAAGREATAMPME
Trigger: TTCCATGGGCATGGCCGTTGCCTCTCTGCCAGCCGCTGGTGCCCACCAGCTGGCTCTGCAGCACATTGCCCTGAGGGGCCTGCCACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 90 bp GGCGGGCTCAGGGGTGGGACAAGCATGCAGAAGGTCCTGGCAGCTTaGGCGTCCACTCTGGCTCTGGCCCAGGGCCCTGACTGTGTCACT +
Preference number: 1 (lower is better)
Translates to: GGLRGGTSMQKVLAA*ASTLALAQGPDCVT
Trigger: AGTGACACAGTCAGGGCCCTGGGCCAGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTCTGCATGCTTGTCCCACCCCTGAGCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 90 bp CAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATaGAGAAGGTCCTGGCAGCTTGAGCGTCCACTCTGGCTCTGGCCC +
Preference number: 1 (lower is better)
Translates to: QPDVGTGAGSGVGQA*RRSWQLERPLWLWP
Trigger: GGGCCAGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTCTGCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 90 bp CCCCTGGGAGTGGCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTaGGCCAGGCTTGAAGACCACCCTGGGTCTGTCCACCAGCCTTTT +
Preference number: 1 (lower is better)
Translates to: PLGVAEACVRGPHSH*ARLEDHPGSVHQPF
Trigger: AAAAGGCTGGTGGACAGACCCAGGGTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGCCACTCCCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 90 bp ATCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTGCAATGCTaGGCGGGGTGGCCCCAGAGCAGCAGAGCCAAGAAGGAGCAGGGG +
Preference number: 1 (lower is better)
Translates to: ILAWPGPQTSIHLQC*AGWPQSSRAKKEQG
Trigger: CCCCTGCTCCTTCTTGGCTCTGCTGCTCTGGGGCCACCCCGCTCAGCATTGCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 90 bp CAAGCATGCAGAAGGTCCTGGCAGCTTGAGCGTCCACTCTGGCTCTaGCCCAGGGCCCTGACTGTGTCACTTGCCCCTGGCCTCCTCTGG +
Preference number: 1 (lower is better)
Translates to: QACRRSWQLERPLWL*PRALTVSLAPGLLW
Trigger: CCAGAGGAGGCCAGGGGCAAGTGACACAGTCAGGGCCCTGGGCCAGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTCTGCATGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 90 bp CCAGGTGAAAGGGGTCCGTCGGCCAGCTCGACTCCACGGCCAGCTTaGCATCTTGGTCCCTGCACCCTCACACTGCTGTCTGGGAATGGA +
Preference number: 1 (lower is better)
Translates to: PGERGPSASSTPRPA*HLGPCTLTLLSGNG
Trigger: TCCATTCCCAGACAGCAGTGTGAGGGTGCAGGGACCAAGATGTCAAGCTGGCCGTGGAGTCGAGCTGGCCGACGGACCCCTTTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp TCTCCCAAATCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTaGAATGCTGAGCGGGGTGGCCCCAGAGCAGCAGAGCCAAGAAGG +
Preference number: 1 (lower is better)
Translates to: SPKSLPGLALRQAST*NAERGGPRAAEPRR
Trigger: CCTTCTTGGCTCTGCTGCTCTGGGGCCACCCCGCTCAGCATTGCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 90 bp CCAGGCCAGAGGCCAGAACACCAAAGAAGTCGGCTCATAACCAGGTaGAAGGGGTCCGTCGGCCAGCTCGACTCCACGGCCAGCTTGACA +
Preference number: 1 (lower is better)
Translates to: PGQRPEHQRSRLITR*KGSVGQLDSTASLT
Trigger: TGTCAAGCTGGCCGTGGAGTCGAGCTGGCCGACGGACCCCTTTCACCTGGTTATGAGCCGACTTCTTTGGTGTTCTGGCCTCTGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp TCCAGCCACGTTACCGAGCATGAGGAGCAGCTCTTCCGAGCAGAGTaGTGGGCAACCGCAGCCCCACTCAAGACAGATGTCCTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: SSHVTEHEEQLFRAE*WATAAPLKTDVLPQ
Trigger: CTGAGGCAGGACATCTGTCTTGAGTGGGGCTGCGGTTGCCCAGCACTCTGCTCGGAAGAGCTGCTCCTCATGCTCGGTAACGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 90 bp GCAGGTCCAAAGGGGCCTGCCCCCTTCCCAGTCCAGAGTCCACACTaGGGACATGCCCAGGATGACCAGCATCTGAGCAGGACAAGCAAA +
Preference number: 1 (lower is better)
Translates to: AGPKGPAPFPVQSPH*GHAQDDQHLSRTSK
Trigger: TTTGCTTGTCCTGCTCAGATGCTGGTCATCCTGGGCATGTCCCCAGTGTGGACTCTGGACTGGGAAGGGGGCAGGCCCCTTTGGACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp CAAGGGGCCTCTGAGGCTGCCAGAGTGAGAGGCGACACATGGGTATaGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: QGASEAARVRGDTWV*PHHQAQASMLPPPP
Trigger: TGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTCGCCTCTCACTCTGGCAGCCTCAGAGGCCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp CAGCAGCAAGGGGCCTCTGAGGCTGCCAGAGTGAGAGGCGACACATaGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCT +
Preference number: 1 (lower is better)
Translates to: QQQGASEAARVRGDT*VWPHHQAQASMLPP
Trigger: AGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTCGCCTCTCACTCTGGCAGCCTCAGAGGCCCCTTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp AGCCACGTTACCGAGCATGAGGAGCAGCTCTTCCGAGCAGAGTGCTaGGCAACCGCAGCCCCACTCAAGACAGATGTCCTGCCTCAGTGC +
Preference number: 1 (lower is better)
Translates to: SHVTEHEEQLFRAEC*ATAAPLKTDVLPQC
Trigger: GCACTGAGGCAGGACATCTGTCTTGAGTGGGGCTGCGGTTGCCCAGCACTCTGCTCGGAAGAGCTGCTCCTCATGCTCGGTAACGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 90 bp GAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTaGCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGG +
Preference number: 1 (lower is better)
Translates to: EGGSSRRGQVQVHGS*QAPFLLGVSCLELG
Trigger: CCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp GATGTCCTGCCTCAGTGCCCCCAGGCACAACCTCACCTCCCCACCTaGTCTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGA +
Preference number: 1 (lower is better)
Translates to: DVLPQCPQAQPHLPT*SPLQGAPGCALSTG
Trigger: TCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAGAGCAGGTGGGGAGGTGAGGTTGTGCCTGGGGGCACTGAGGCAGGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 90 bp GGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATaGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGA +
Preference number: 1 (lower is better)
Translates to: GPGRRIFPKRPSAGP*FLPSTIPSRGFLPG
Trigger: TCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 90 bp TGCCCCCTTCCCAGTCCAGAGTCCACACTGGGGACATGCCCAGGATaGCCAGCATCTGAGCAGGACAAGCAAAGACGAGGTCTTGCTGGA +
Preference number: 1 (lower is better)
Translates to: CPLPSPESTLGTCPG*PASEQDKQRRGLAG
Trigger: TCCAGCAAGACCTCGTCTTTGCTTGTCCTGCTCAGATGCTGGTCATCCTGGGCATGTCCCCAGTGTGGACTCTGGACTGGGAAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 90 bp ACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTaGCAGGTCTTCAGGAAGAGCTGGACGTGTGACACCAGTAAGGCC +
Preference number: 1 (lower is better)
Translates to: TVETQSEPNAPGFGH*QVFRKSWTCDTSKA
Trigger: GGCCTTACTGGTGTCACACGTCCAGCTCTTCCTGAAGACCTGTCAGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 90 bp AGAATCTTGCAGAGGCCTCCAGTGCTCCCTGATTCCCTGGGCCACTaGCTGAGGACCCTAGTCATGGCTAGTTCATCCTGTGGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: RILQRPPVLPDSLGH*LRTLVMASSSCGVQ
Trigger: CTGCACCCCACAGGATGAACTAGCCATGACTAGGGTCCTCAGGCAGTGGCCCAGGGAATCAGGGAGCACTGGAGGCCTCTGCAAGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp ATCCAGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTaGAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTT +
Preference number: 1 (lower is better)
Translates to: IQPGAWKEDLPEEAK*RSMVPAKHHSFSGF
Trigger: AAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp ACCACCCTGGGTCTGTCCACCAGCCTTTTTCCTCCTCTAGGCTCCTaGCCTTTTCCCAGGCCAGAGGCCAGAACACCAAAGAAGTCGGCT +
Preference number: 1 (lower is better)
Translates to: TTLGLSTSLFPPLGS*PFPRPEARTPKKSA
Trigger: AGCCGACTTCTTTGGTGTTCTGGCCTCTGGCCTGGGAAAAGGGCAGGAGCCTAGAGGAGGAAAAAGGCTGGTGGACAGACCCAGGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp GGAAGGCCCACCTCAGCACACTTCCCCTACCCTAAGATGCCACCCTaGAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTAAG +
Preference number: 1 (lower is better)
Translates to: GRPTSAHFPYPKMPP*SGLFLHMNVHLWPK
Trigger: CTTAGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTTAGGGTAGGGGAAGTGTGCTGAGGTGGGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp ATTTACCAGCCTGGCCACCAAACCAGCCCAACTCCAGGCCTAATCTaGCTCGCCTCCACCTGTCCTCCTGCCACTTCTGGTCAGCTGAAA +
Preference number: 1 (lower is better)
Translates to: IYQPGHQTSPTPGLI*LASTCPPATSGQLK
Trigger: TTTCAGCTGACCAGAAGTGGCAGGAGGACAGGTGGAGGCGAGCCAGATTAGGCCTGGAGTTGGGCTGGTTTGGTGGCCAGGCTGGTAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp AGGGGGACCCTAGCTCCAGGGTCACTGGACTTCACTCAGAGGGACTaGTTCTGCAGCTCTGGAATGGATGTGGGCTGGCTACATTCAGAG +
Preference number: 1 (lower is better)
Translates to: RGTLAPGSLDFTQRD*FCSSGMDVGWLHSE
Trigger: CTCTGAATGTAGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAGTCCCTCTGAGTGAAGTCCAGTGACCCTGGAGCTAGGGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp CACCTGCTCTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTaGAGCCTCTTCTCGGCTTGGAAAGCCTGTCCTGACTCCTCCACC +
Preference number: 1 (lower is better)
Translates to: HLLSITGSTRLCSVY*SLFSAWKACPDSST
Trigger: GGTGGAGGAGTCAGGACAGGCTTTCCAAGCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAGAGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 90 bp TCTGAACCTCCCCTACTGAGTAGCTGCTCTGGCCTCAAAGTACTGTaGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTGAC +
Preference number: 1 (lower is better)
Translates to: SEPPLLSSCSGLKVL*RLRVSLTPLASGTD
Trigger: GTCAGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGGAGGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 90 bp GTGCTCTGTCTACTGGAGCCTCTTCTCGGCTTGGAAAGCCTGTCCTaGCTCCTCCACCCACAGAAACCTGTCTCCCAAATCCTTGCCTGG +
Preference number: 1 (lower is better)
Translates to: VLCLLEPLLGLESLS*LLHPQKPVSQILAW
Trigger: CCAGGCAAGGATTTGGGAGACAGGTTTCTGTGGGTGGAGGAGTCAGGACAGGCTTTCCAAGCCGAGAAGAGGCTCCAGTAGACAGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 90 bp TCTCTGAGCCCCAGGCCTGCAGGTGAAGGAAGTCCACCAGGACAATaGTCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCATC +
Preference number: 1 (lower is better)
Translates to: SLSPRPAGEGSPPGQ*SPSLRPFHSRPLSI
Trigger: GATGCTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGACTTCCTTCACCTGCAGGCCTGGGGCTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 90 bp ACCCTAGCTCCAGGGTCACTGGACTTCACTCAGAGGGACTGGTTCTaGAGCTCTGGAATGGATGTGGGCTGGCTACATTCAGAGCCAGCT +
Preference number: 1 (lower is better)
Translates to: TLAPGSLDFTQRDWF*SSGMDVGWLHSEPA
Trigger: AGCTGGCTCTGAATGTAGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAGTCCCTCTGAGTGAAGTCCAGTGACCCTGGAGCTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 90 bp GCCGTACCCTCACGCTCAGTCTCTGAACCTCCCCTACTGAGTAGCTaGTCTGGCCTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACG +
Preference number: 1 (lower is better)
Translates to: AVPSRSVSEPPLLSS*SGLKVLWRLRVSLT
Trigger: CGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGGAGGTTCAGAGACTGAGCGTGAGGGTACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 90 bp GGAGCCATCTGGGCTGGCCATTGTAATATCCTAAATTTACCAGCCTaGCCACCAAACCAGCCCAACTCCAGGCCTAATCTGGCTCGCCTC +
Preference number: 1 (lower is better)
Translates to: GAIWAGHCNILNLPA*PPNQPNSRPNLARL
Trigger: GAGGCGAGCCAGATTAGGCCTGGAGTTGGGCTGGTTTGGTGGCCAGGCTGGTAAATTTAGGATATTACAATGGCCAGCCCAGATGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp AGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTaGGATTGGCTCAAAAAGGCCTGCCCCTCCAACACCATGGCACCC +
Preference number: 1 (lower is better)
Translates to: RDQHSAAVTGIFTLW*DWLKKACPSNTMAP
Trigger: GGGTGCCATGGTGTTGGAGGGGCAGGCCTTTTTGAGCCAATCCCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 90 bp CTCACAGCAATGGAGACGGCGCTGATGACAGCTCCCAGGTATCCCTaGATGAACTTGGATGCAGGTGAAGGCTTGGTCGCATTGCGGTTT +
Preference number: 1 (lower is better)
Translates to: LTAMETALMTAPRYP*MNLDAGEGLVALRF
Trigger: AAACCGCAATGCGACCAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATACCTGGGAGCTGTCATCAGCGCCGTCTCCATTGCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 90 bp CAGTCTTCTGGTTTCAGACAGGGAGTGGAGGCTGAGAGAAGGGAATaGATTTGTCTGACATCTCACTGCCATTTAGTGACAGAGCCAGGG +
Preference number: 1 (lower is better)
Translates to: QSSGFRQGVEAERRE*ICLTSHCHLVTEPG
Trigger: CCCTGGCTCTGTCACTAAATGGCAGTGAGATGTCAGACAAATTCATTCCCTTCTCTCAGCCTCCACTCCCTGTCTGAAACCAGAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 90 bp CCAGTTACATTAATGTATTGTGTAATGGATGAAATGACAGAGTTGTaGAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCC +
Preference number: 1 (lower is better)
Translates to: PVTLMYCVMDEMTEL*RGPSPSGVGYRRPS
Trigger: GGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACTCTGTCATTTCATCCATTACACAATACATTAATGTAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CAA 90 bp GGCCAGGCAGGGACACCAGGGGTGCAGCACCATCGCAGGCGTGGCTaGTGTTCTCGCACAGCTGGCCAGCCCCGCCCTGACTGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: GQAGTPGVQHHRRRG*CSRTAGQPRPDCVQ
Trigger: CTGGACACAGTCAGGGCGGGGCTGGCCAGCTGTGCGAGAACACAAGCCACGCCTGCGATGGTGCTGCACCCCTGGTGTCCCTGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACGCCTCCAGTGCTCCCTaGTTCCCTGGGCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHASSAP*FPGPLP
Trigger: AGGCAGTGGCCCAGGGAATCAGGGAGCACTGGAGGC...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACCAGGACTGCTGGGGTTaGCGTGCTGCTCCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHQDCWG*RAAPCR
Trigger: CCTGCAGGGAGCAGCACGCCAACCCCAGCAGTCCTG...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACGGGACATGCCCAGGATaGCCAGCATCTGAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHGTCPG*PASEQD
Trigger: GTCCTGCTCAGATGCTGGTCATCCTGGGCATGTCCC...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGGCTGCTCCCTGCAGGTaGAGCCGTGAGTCTACGGCC +
Preference number: 2 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWAAPCR*SRESTA
Trigger: GGCCGTAGACTCACGGCTGCACCTGCAGGGAGCAGC...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCACAGGGGGCCCAGGACTaGTGGGGTTGGCGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSQGAQD*WGWRAA
Trigger: AGCAGCACGCCAACCCCAGCAGTCCTGGGCCCCCTG...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGGGGCCCAGGACTGCTaGGGTTGGCGTGCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQGAQDC*GWRAAP
Trigger: GGGAGCAGCACGCCAACCCCAGCAGTCCTGGGCCCC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGCTGCAGGTGCAGCCGTaGGTCTACGGCCCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELLQVQP*VYGPAP
Trigger: AGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAG...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCCCTGGCTTCGGGCACTaGCAGGTCTTCAGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACPGFGH*QVFRKS
Trigger: GCTCTTCCTGAAGACCTGTCAGTGCCCGAAGCCAGG...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCCCTGACTGTGTCACTTaGCCCTGGCCTCCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACPDCVT*PWPPLG
Trigger: TCCCAGAGGAGGCCAGGGGCAAGTGACACAGTCAGG...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCGGCAGCCTTGGTGGCTaGAGAAGCTCCGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPGSLGG*RSSAEG
Trigger: GCCTTCTGCGGAGCTTCTCCAGCCACCAAGGCTGCC...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACAAGACGAGGTCTTGCTaGAGGAGCCAGTGGGAACCC +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHKTRSC*RSQWEP
Trigger: GGGTTCCCACTGGCTCCTCCAGCAAGACCTCGTCTT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CAA 90 bp TGGCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTaGAAGACCACCCTGGGTCTGTCCACCAGCCTTTTTCCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: WLRLACGGLTLTGPG*KTTLGLSTSLFPPL
Trigger: TAGAGGAGGAAAAAGGCTGGTGGACAGACCCAGGGTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTTCCCCGGCTGCACAGTaGTCCGTCCCCAGGCCGCTG +
Preference number: 2 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPSPAAQ*SVPRPL
Trigger: CAGCGGCCTGGGGACGGAGCACTGTGCAGCCGGGGA...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGCTGCTGGGGTTGGCGTaGTGCTCCCTGCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELLLGLA*CSLQVQ
Trigger: CTGCACCTGCAGGGAGCAGCACGCCAACCCCAGCAG...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCGGGAGCACCAGGTTGTaGTCTGTCTACTGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACGSTRL*SVYWSL
Trigger: GAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCC...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR TCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGCAGCAAGGGGCCTCTaGGGCTGCCAGAGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAAARGL*GCQSER
Trigger: CCTCTCACTCTGGCAGCCTCAGAGGCCCCTTGCTGC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAGCCCCTCCAACACCATaGCACCCCCACACTCCCGCT +
Preference number: 2 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQAPPTP*HPHTPA
Trigger: AGCGGGAGTGTGGGGGTGCCATGGTGTTGGAGGGGC...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCCCTCCACTGTAGGTTaGGCACTCTCCCAGGGGGCC +
Preference number: 2 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSPSTVG*ALSQGA
Trigger: GGCCCCCTGGGAGAGTGCTCAACCTACAGTGGAGGG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGAGGAGGGGGCTGCACTaGGGCTGGTGCTTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWRRGLH*GWCFPL
Trigger: CAGGGGGAAGCACCAGCCTCAGTGCAGCCCCCTCCT...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAACTGGGGTTGGCGTGCTaGTCCCTGCAGGTGCAGCCG +
Preference number: 2 (lower is better)
Translates to: TPGSASLCTACSSFLVCKLGLAC*SLQVQP
Trigger: CGGCTGCACCTGCAGGGAGCAGCACGCCAACCCCAG...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTGGGTCAGGAGGGGGCTaGACTGAGGCTGGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFGSGGG*TEAGAS
Trigger: GGAAGCACCAGCCTCAGTGCAGCCCCCTCCTGACCC...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCCCCCTCAGGGCAATGTaGTGCAGAGCCAGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAPLRAM*CRASWW
Trigger: CCACCAGCTGGCTCTGCAGCACATTGCCCTGAGGGG...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCCCCCTACTGAGTAGCTaGTCTGGCCTCAAAGTACTG +
Preference number: 2 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACPLLSS*SGLKVL
Trigger: CAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGG...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAGCAGGGAGCCACACCTaGCGTACCCTCACGCTCAGT +
Preference number: 2 (lower is better)
Translates to: PLESAIEGHPSGDPETARAGSHT*RTLTLS
Trigger: ACTGAGCGTGAGGGTACGGCAGGTGTGGCTCCCTGC...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACATGAATGTTCACCTCTaGCCTAAGTCTCCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHMNVHL*PKSPLR
Trigger: CCTCAGGGGAGACTTAGGCCAGAGGTGAACATTCAT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACACATTATGGTGGGATTaGCTCAAAAAGGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHTLWWD*LKKACP
Trigger: GGGGCAGGCCTTTTTGAGCCAATCCCACCATAATGT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGATTCCGAGCAGAGTGCTaGGCAACCGCAGCCCCACTC +
Preference number: 2 (lower is better)
Translates to: PLESAIEGHPSGDPETARFRAEC*ATAAPL
Trigger: GAGTGGGGCTGCGGTTGCCCAGCACTCTGCTCGGAA...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR TCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGGCAAGGCCTTCTGCTaGGGCCAACTGCAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAGKAFC*GQLQVQ
Trigger: TTGGACCTGCAGTTGGCCTCAGCAGAAGGCCTTGCC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACAAAGCAAATGAGTTATaGGATGCTGAGGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: AEACVRGPHSHWARLEDHKANEL*DAEATG
Trigger: GCCTGTGGCCTCAGCATCTCATAACTCATTTGCTTT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGAGAGCTGTTCATTGGTaGCCCCCGGGCGCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQRAVHW*PPGAGS
Trigger: GGACCCTGCGCCCGGGGGTCACCAATGAACAGCTCT...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTTGGCGTGCTGCTCCCTaGAGGTGCAGCCGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPWRAAP*RCSRES
Trigger: AGACTCACGGCTGCACCTGCAGGGAGCAGCACGCCA...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCCAGGTCCATGGTTCCTaGCAAGCACCATTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPQVHGS*QAPFLL
Trigger: GAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTG...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAATCGGGGTTTCCTGCCTaGAGCTGGGGTCACTTCAGG +
Preference number: 2 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQSGFPA*SWGHFR
Trigger: CCTGAAGTGACCCCAGCTCCAGGCAGGAAACCCCGA...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCCCTACCTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGPTSAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGG...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTGTTCATCCTGTGGGGTaGAGACCACCTTCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPVHPVG*RPPSLP
Trigger: GGGGAGAGAAGGTGGTCTGCACCCCACAGGATGAAC...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTCCCGAAGAGGCCAAGTaGAGGTCCATGGTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFPEEAK*RSMVPA
Trigger: GGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGG...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCAGACAAGCATCCACCTaGAATGCTGAGCGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGRQAST*NAERGG
Trigger: GCCACCCCGCTCAGCATTGCAGGTGGATGCTTGTCT...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCTGTCTCCCAAATCCTTaGCTGGCCTGGCCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGCLPNP*LAWPSD
Trigger: GTCTGAGGGCCAGGCCAGGCAAGGATTTGGGAGACA...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTCCTCACCTCCCCACCTaGTCTCCATTACAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: SCEGALRPLESAIEGHPSPHLPT*SPLQGA
Trigger: TGCTCCCTGTAATGGAGAGCAGGTGGGGAGGTGAGG...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCTCTTCCGAGCAGAGTaGTGGGCAACCGCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQLFRAE*WATAAP
Trigger: TGGGGCTGCGGTTGCCCAGCACTCTGCTCGGAAGAG...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGGAATGGATGTGGGCTaGCTACATTCAGAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSGMDVG*LHSEPA
Trigger: AGCTGGCTCTGAATGTAGCCAGCCCACATCCATTCC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGCTGGTTCTGCAGCTCTaGAATGGATGTGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQLVLQL*NGCGLA
Trigger: AGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAG...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCGTTTCAGACAGGGAGTaGAGGCTGAGAGAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPVSDRE*RLREGN
Trigger: ATTCCCTTCTCTCAGCCTCCACTCCCTGTCTGAAAC...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGAAATGACAGAGTTGTaGAGGGGCCCTTCGCCCTCT +
Preference number: 2 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGEMTEL*RGPSPS
Trigger: AGAGGGCGAAGGGCCCCTTCACAACTCTGTCATTTC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGCAGAGGGACTGGTTCTaGAGCTCTGGAATGGATGTG +
Preference number: 2 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQQRDWF*SSGMDV
Trigger: CACATCCATTCCAGAGCTGCAGAACCAGTCCCTCTG...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTTGGATCCTTTGCCACTaGACCGCCACAGGAGCAGAC +
Preference number: 2 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFWILCH*TATGAD
Trigger: GTCTGCTCCTGTGGCGGTGCAGTGGCAAAGGATCCA...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGAGTCTCCTGCTGGGCTaGAGGACAAGCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQSLLLG*RTSWVA
Trigger: TGCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACT...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTACTCCAGGCCTAATCTaGCTCGCCTCCACCTGTCCT +
Preference number: 2 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPTPGLI*LASTCP
Trigger: AGGACAGGTGGAGGCGAGCCAGATTAGGCCTGGAGT...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGTGGATGCCAGTGTCTaGTTGGGCAAGAGAAGACCG +
Preference number: 2 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGVDASV*LGKRRP
Trigger: CGGTCTTCTCTTGCCCAACCAGACACTGGCATCCAC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAAATCCTTGCCTGGCCTaGCCCTCAGACAAGCATCCA +
Preference number: 2 (lower is better)
Translates to: PLESAIEGHPSGDPETARNPCLA*PSDKHP
Trigger: TGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATT...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGGGCTGCAGGACAAGCTaGGTGGCAGGTCAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQGCRTS*VAGQQS
Trigger: AGACTGCTGACCTGCCACCCAGCTTGTCCTGCAGCC...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CAA 90 bp GACAAGCAAAGACGAGGTCTTGCTGGAGGAGCCAGTGGGAACCCCTaGATCCAGTCTTCTGGTTTCAGACAGGGAGTGGAGGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: DKQRRGLAGGASGNP*IQSSGFRQGVEAER
Trigger: TCTCTCAGCCTCCACTCCCTGTCTGAAACCAGAAGACTGGATCAAGGGGTTCCCACTGGCTCCTCCAGCAAGACCTCGTCTTTGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CAA 90 bp CTTTGGCCTTCACCCACCAAGTCCCCAGTATCAGGGACCCCCAATTaGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAG +
Preference number: 2 (lower is better)
Translates to: LWPSPTKSPVSGTPN*SDSQMKSPAGLQDK
Trigger: CTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAAATTGGGGGTCCCTGATACTGGGGACTTGGTGGGTGAAGGCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR TCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGCCTATGTTAAAATGTaGATGGGTCAGTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSAYVKM*MGQSPS
Trigger: GGAGGGAGACTGACCCATTCACATTTTAACATAGGC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTACCCCTTGGCTCACCTaGAGCTGCATTTGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFTPWLT*SCIWEH
Trigger: ATGCTCCCAAATGCAGCTTCAGGTGAGCCAAGGGGT...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGGATTCCCTGGGCCACTaGCTGAGGACCCTAGTCATG +
Preference number: 2 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWDSLGH*LRTLVM
Trigger: CATGACTAGGGTCCTCAGGCAGTGGCCCAGGGAATC...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCTCTTCCTTCCTGGTCTaGAAATGGGAGGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIASSFLV*KWEGDG
Trigger: CCCATCTCCCTCCCATTTGCAGACCAGGAAGGAAGA...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGTCAAGACAGATGTCCTaGCTCAGTGCCCCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQSRQMS*LSAPRH
Trigger: GTGCCTGGGGGCACTGAGGCAGGACATCTGTCTTGA...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGCTAAATTTACCAGCCTaGCCACCAAACCAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQLNLPA*PPNQPN
Trigger: GTTGGGCTGGTTTGGTGGCCAGGCTGGTAAATTTAG...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGCTCTGGAATGGATGTaGGCTGGCTACATTCAGAGC +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAALEWM*AGYIQS
Trigger: GCTCTGAATGTAGCCAGCCCACATCCATTCCAGAGC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAACTGCCAGAAGACAGTaGATGCCAGTGTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: PLESAIEGHPSGDPETARTARRQ*MPVSGW
Trigger: CCAACCAGACACTGGCATCCACTGTCTTCTGGCAGT...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGTCCCAAATCCTTGCCTaGCCTGGCCCTCAGACAAGC +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQSQILA*PGPQTS
Trigger: GCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGA...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR TCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGATGCGGTTTGCATAGTTaGCACAGGCATTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: PLESAIEGHPSGDPETARCGLHS*HRHCGS
Trigger: AGAGCCACAATGCCTGTGTCAACTATGCAAACCGCA...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCACATTCAGAGCCAGCTaGCCACAGAATCTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIATFRAS*PQNLAE
Trigger: CTCTGCAAGATTCTGTGGGCAGCTGGCTCTGAATGT...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCTGGGACTACAGGTGTaGCCCACTGTGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQLGLQV*PTVLSY
Trigger: ATAGCTGAGCACAGTGGGGCACACCTGTAGTCCCAG...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTATGCAGGTGAAGGCTTaGTCGCATTGCGGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTMQVKA*SHCGLH
Trigger: ATGCAAACCGCAATGCGACCAAGCCTTCACCTGCAT...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTGGCATGAGACCTTCCTaGTTAGAAAGGGATGGGATG +
Preference number: 2 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPGMRPS*LERDGM
Trigger: CATCCCATCCCTTTCTAAGCAGGAAGGTCTCATGCC...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCGGTCGCATTGCGGTTTaGATAGTTGACACAGGCATT +
Preference number: 2 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGGRIAV*IVDTGI
Trigger: AATGCCTGTGTCAACTATGCAAACCGCAATGCGACC...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGCCAAGTGCAGGTCCATaGTTCCTGCCAAGCACCATT +
Preference number: 2 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWPSAGP*FLPSTI
Trigger: AATGGTGCTTGGCAGGAACCATGGACCTGCACTTGG...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGAGGTGTCTAAGGAGCTaGCCTAGGCATTCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWRCLRS*PRHSQA
Trigger: TGCCTGAGAATGCCTAGGCCAGCTCCTTAGACACCT...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGTTGACACAGGCATTGTaGCTCTGGTTCAGCCACTGC +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQLTQAL*LWFSHC
Trigger: GCAGTGGCTGAACCAGAGCCACAATGCCTGTGTCAA...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTCGTCCACTCTGGCTCTaGCCCAGGGCCCTGACTGTG +
Preference number: 2 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFRPLWL*PRALTV
Trigger: CACAGTCAGGGCCCTGGGCCAGAGCCAGAGTGGACG...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGGTGATCTTCCCGCCTTaGCCTTCCAAAGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: STRTMIPFTQAFPFKATQVIFPP*PSKVLG
Trigger: TCCCAACACTTTGGAAGGCCAAGGCGGGAAGATCAC...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR TCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTAGGGTGAGCTTGAAGTaGGCTTTTCAAAAGACGACC +
Preference number: 2 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFRVSLK*AFQKTT
Trigger: GGTCGTCTTTTGAAAAGCTCACTTCAAGCTCACCCT...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAAACTGCTCCCGGGATATaGAGTCACATACACAAGGCA +
Preference number: 2 (lower is better)
Translates to: TPGSASLCTACSSFLVCKTAPGI*SHIHKA
Trigger: TGCCTTGTGTATGTGACTCCATATCCCGGGAGCAGT...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTGTGGGTAGGCAGTTTTaGTCCCAAGATAAAGTGCAC +
Preference number: 2 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFVGRQF*SQDKVH
Trigger: GTGCACTTTATCTTGGGACCAAAACTGCCTACCCAC...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTGATGTCCTGCCTCAGTaGCCCCAGGCACAACCTCAC +
Preference number: 2 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFDVLPQ*PQAQPH
Trigger: GTGAGGTTGTGCCTGGGGGCACTGAGGCAGGACATC...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCATGTTAAAATGTGAATaGGTCAGTCTCCCTCCACTG +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAMLKCE*VSLPPL
Trigger: CAGTGGAGGGAGACTGACCCATTCACATTTTAACAT...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCCATAATTGTGCTGAGTaGAGTTTTGACAACCCCACA +
Preference number: 2 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAHNCAE*SFDNPT
Trigger: TGTGGGGTTGTCAAAACTCCACTCAGCACAATTATG...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp AACCTGTCTCCCAAATCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTGCAAGACCGACTACAATTaGCGTCCCAAAAGGAATATA +
Preference number: 2 (lower is better)
Translates to: NLSPKSLPGLALRQASTCKTDYN*RPKRNI
Trigger: TATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTT...GCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGAGACAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CAA 90 bp GGCCCAGGCATCTATGTTACCTCCTCCTCCAGAACTGTAAAGTGTTaGGCAAAGGTCAACTGCTCCCGGGATATGGAGTCACATACACAA +
Preference number: 2 (lower is better)
Translates to: GPGIYVTSSSRTVKC*AKVNCSRDMESHTQ
Trigger: TTGTGTATGTGACTCCATATCCCGGGAGCAGTTGACCTTTGCCAAACACTTTACAGTTCTGGAGGAGGAGGTAACATAGATGCCTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR TCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGGCTGAGAGAAGGGAATaGATTTGTCTGACATCTCAC +
Preference number: 2 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWAERRE*ICLTSH
Trigger: GTGAGATGTCAGACAAATTCATTCCCTTCTCTCAGC...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR GCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAAAAAGGAATATAACCTaGTTGATTTTCTGTGCACTC +
Preference number: 2 (lower is better)
Translates to: PLESAIEGHPSGDPETARKRNIT*LIFCAL
Trigger: GAGTGCACAGAAAATCAAGCAGGTTATATTCCTTTT...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGTCTACTTCTACCCCATaGGCACTCTACAATTTTTCA +
Preference number: 2 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWSTSTP*ALYNFS
Trigger: TGAAAAATTGTAGAGTGCCCATGGGGTAGAAGTAGA...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTTTGTGCTCTGTCTACTaGAGCCTCTTCTCGGCTTGG +
Preference number: 2 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFLCSVY*SLFSAW
Trigger: CCAAGCCGAGAAGAGGCTCCAGTAGACAGAGCACAA...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTATGCCAGTGTCTGGTTaGGCAAGAGAAGACCGACTA +
Preference number: 2 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIMPVSG*AREDRL
Trigger: TAGTCGGTCTTCTCTTGCCCAACCAGACACTGGCAT...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTGGCCTCAAAGTACTGTaGAGACTCAGAGTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFGLKVL*RLRVSL
Trigger: TAGGCTCACTCTGAGTCTCCACAGTACTTTGAGGCC...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 72 bp GGCAGGGACACCAGGGGTGCAGCACCATCGCAGGCGTaGCTTGTGTTCTCGCACAGCTGGCCAGCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: GRDTRGAAPSQA*LVFSHSWPAPP
Trigger: GGGCGGGGCTGGCCAGCTGTGCGAGAACACAAGCCACGCCTGCGATGGTGCTGCACCCCTGGTGTCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 72 bp CAGGACTGCTGGGGTTGGCGTGCTGCTCCCTGCAGGTaGAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: QDCWGWRAAPCR*SRESTALPLSS
Trigger: GGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGCAGCACGCCAACCCCAGCAGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
3UTR GCA 72 bp CCTCAGGAGAGTGGCAGGCCCCTCAGGGCAATGTGCTaGAGAGCCAGCTGGTGGGCACCAGCGGCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: PQESGRPLRAMC*RASWWAPAAGR
Trigger: TCTGCCAGCCGCTGGTGCCCACCAGCTGGCTCTGCAGCACATTGCCCTGAGGGGCCTGCCACTCTCCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 72 bp CCCCCACCCCGCTCGCTCCAGCCACGTTACCGAGCATaGGGAGCAGCTCTTCCGAGCAGAGTGCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: PPPRSLQPRYRA*GAALPSRVLGN
Trigger: GTTGCCCAGCACTCTGCTCGGAAGAGCTGCTCCTCATGCTCGGTAACGTGGCTGGAGCGAGCGGGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 72 bp GTGGCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTaGGCCAGGCTTGAAGACCACCCTGGGTCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: VAEACVRGPHSH*ARLEDHPGSVH
Trigger: GTGGACAGACCCAGGGTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp GCGGGCTCAGGGGTGGGACAAGCATGCAGAAGGTCCTaGCAGCTTGAGCGTCCACTCTGGCTCTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: AGSGVGQACRRS*QLERPLWLWPR
Trigger: CCTGGGCCAGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTCTGCATGCTTGTCCCACCCCTGAGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp AGGGGTGGGACAAGCATGCAGAAGGTCCTGGCAGCTTaGGCGTCCACTCTGGCTCTGGCCCAGGGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: RGGTSMQKVLAA*ASTLALAQGPD
Trigger: GTCAGGGCCCTGGGCCAGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTCTGCATGCTTGTCCCACCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 72 bp TCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTaGAATGCTGAGCGGGGTGGCCCCAGAGCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: SLPGLALRQAST*NAERGGPRAAE
Trigger: CTCTGCTGCTCTGGGGCCACCCCGCTCAGCATTGCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CAA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCATGGGGCAGGCAGCCTaGGTGGCTGGAGAAGCTCCG +
Preference number: 3 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPMGQAA*VAGEAP
Trigger: CGGAGCTTCTCCAGCCACCAAGGCTGCCTGCCCCAT...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp GGGGCCTCTGAGGCTGCCAGAGTGAGAGGCGACACATaGGTATGGCCCCACCATCAGGCCCAGGCATCTATG +
Preference number: 3 (lower is better)
Translates to: GASEAARVRGDT*VWPHHQAQASM
Trigger: CATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTCGCCTCTCACTCTGGCAGCCTCAGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp AACCTGTCTCCCAAATCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTGCCTCCAGAGCTGTTCATaGGTGACCCCCGGGCGCAGG +
Preference number: 3 (lower is better)
Translates to: NLSPKSLPGLALRQASTCLQSCS*VTPGRR
Trigger: CCTGCGCCCGGGGGTCACCAATGAACAGCTCTGGAG...GCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGAGACAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 72 bp CCTCAGTGCCCCCAGGCACAACCTCACCTCCCCACCTaGTCTCCATTACAGGGAGCACCAGGTTGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PQCPQAQPHLPT*SPLQGAPGCAL
Trigger: CAGAGCACAACCTGGTGCTCCCTGTAATGGAGAGCAGGTGGGGAGGTGAGGTTGTGCCTGGGGGCACTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 72 bp CCTGGCCACCAAACCAGCCCAACTCCAGGCCTAATCTaGCTCGCCTCCACCTGTCCTCCTGCCACTTCTGGT +
Preference number: 3 (lower is better)
Translates to: PGHQTSPTPGLI*LASTCPPATSG
Trigger: ACCAGAAGTGGCAGGAGGACAGGTGGAGGCGAGCCAGATTAGGCCTGGAGTTGGGCTGGTTTGGTGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp GTCGGCCAGCTCGACTCCACGGCCAGCTTGACATCTTaGTCCCTGCACCCTCACACTGCTGTCTGGGAATGG +
Preference number: 3 (lower is better)
Translates to: VGQLDSTASLTS*SLHPHTAVWEW
Trigger: CCATTCCCAGACAGCAGTGTGAGGGTGCAGGGACCAAGATGTCAAGCTGGCCGTGGAGTCGAGCTGGCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 72 bp AGGCCAGAACACCAAAGAAGTCGGCTCATAACCAGGTaGAAGGGGTCCGTCGGCCAGCTCGACTCCACGGCC +
Preference number: 3 (lower is better)
Translates to: RPEHQRSRLITR*KGSVGQLDSTA
Trigger: GGCCGTGGAGTCGAGCTGGCCGACGGACCCCTTTCACCTGGTTATGAGCCGACTTCTTTGGTGTTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 72 bp GGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTaGAGGTCCATGGTTCCTGCCAAGCACCATTCCTTC +
Preference number: 3 (lower is better)
Translates to: GAWKEDLPEEAK*RSMVPAKHHSF
Trigger: GAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 72 bp GGCCAGCTTGACATCTTGGTCCCTGCACCCTCACACTaGTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: GQLDILVPAPSH*CLGMEEGHPQA
Trigger: GGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTGAGGGTGCAGGGACCAAGATGTCAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTTCCCTCCACTGTAGGTaGAGCACTCTCCCAGGGGGC +
Preference number: 3 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPSLHCR*STLPGG
Trigger: GCCCCCTGGGAGAGTGCTCAACCTACAGTGGAGGGA...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGAGCAAAGACGAGGTCTaGCTGGAGGAGCCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQSKDEV*LEEPVG
Trigger: TCCCACTGGCTCCTCCAGCAAGACCTCGTCTTTGCT...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGAAGGTCCTGGCAGCTaGAGCGTCCACTCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SCEGALRPLESAIEGHPSEGPGS*SVHSGS
Trigger: AGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTC...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CAA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGCCAGTGGGAACCCCTaGATCCAGTCTTCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQASGNP*IQSSGF
Trigger: GAAACCAGAAGACTGGATCAAGGGGTTCCCACTGGC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGGTGATCTTCCCGCCTaGGCCTTCCAAAGTGTTGGG +
Preference number: 3 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGGDLPA*AFQSVG
Trigger: CCCAACACTTTGGAAGGCCAAGGCGGGAAGATCACC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp CCCAGTCCAGAGTCCACACTGGGGACATGCCCAGGATaGCCAGCATCTGAGCAGGACAAGCAAAGACGAGGT +
Preference number: 3 (lower is better)
Translates to: PSPESTLGTCPG*PASEQDKQRRG
Trigger: ACCTCGTCTTTGCTTGTCCTGCTCAGATGCTGGTCATCCTGGGCATGTCCCCAGTGTGGACTCTGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 72 bp TGGAATGGATGTGGGCTGGCTACATTCAGAGCCAGCTaGCCACAGAATCTTGCAGAGGCCTCCAGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: WNGCGLATFRAS*PQNLAEASSAP
Trigger: GGGAGCACTGGAGGCCTCTGCAAGATTCTGTGGGCAGCTGGCTCTGAATGTAGCCAGCCCACATCCATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 72 bp TCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTaGCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SSRRGQVQVHGS*QAPFLLGVSCL
Trigger: CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp TCTGAGGCTGCCAGAGTGAGAGGCGACACATGGGTATaGCCCCACCATCAGGCCCAGGCATCTATGTTACCT +
Preference number: 3 (lower is better)
Translates to: SEAARVRGDTWV*PHHQAQASMLP
Trigger: AGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTCGCCTCTCACTCTGGCAGCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp CCCCTACTGAGTAGCTGCTCTGGCCTCAAAGTACTGTaGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCG +
Preference number: 3 (lower is better)
Translates to: PLLSSCSGLKVL*RLRVSLTPLAS
Trigger: CGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CAA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGTGCTGAGTGGAGTTTaGACAACCCCACATAAGGCC +
Preference number: 3 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELVLSGV*TTPHKA
Trigger: GGCCTTATGTGGGGTTGTCAAAACTCCACTCAGCAC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGATGCCAGTGTCTGGTaGGGCAAGAGAAGACCGACT +
Preference number: 3 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGDASVW*GKRRPT
Trigger: AGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CAA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCGATGCAGGTGAAGGCTaGGTCGCATTGCGGTTTGCA +
Preference number: 3 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGDAGEG*VALRFA
Trigger: TGCAAACCGCAATGCGACCAAGCCTTCACCTGCATC...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp CCGTACCCTCACGCTCAGTCTCTGAACCTCCCCTACTaGGTAGCTGCTCTGGCCTCAAAGTACTGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: PYPHAQSLNLPY*VAALASKYCGD
Trigger: GTCTCCACAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGGAGGTTCAGAGACTGAGCGTGAGGGTACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp CCCAGGCCTGCAGGTGAAGGAAGTCCACCAGGACAATaGTCCCCTTCACTCAGGCCTTTCCATTCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: PRPAGEGSPPGQ*SPSLRPFHSRP
Trigger: TGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGACTTCCTTCACCTGCAGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 72 bp GTGGCTCTGGTTCAGCCACTGCCAGAAGACAGTGGATaGCAGTGTCTGGTTGGGCAAGAGAAGACCGACTAC +
Preference number: 3 (lower is better)
Translates to: VALVQPLPEDSG*QCLVGQEKTDY
Trigger: GTAGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATCCACTGTCTTCTGGCAGTGGCTGAACCAGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 72 bp CTCAGAGGGACTGGTTCTGCAGCTCTGGAATGGATGTaGGCTGGCTACATTCAGAGCCAGCTGCCCACAGAA +
Preference number: 3 (lower is better)
Translates to: LRGTGSAALEWM*AGYIQSQLPTE
Trigger: TTCTGTGGGCAGCTGGCTCTGAATGTAGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAGTCCCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp AGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATaGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTC +
Preference number: 3 (lower is better)
Translates to: RRIFPKRPSAGP*FLPSTIPSRGF
Trigger: GAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp TCTTGGTCCCTGCACCCTCACACTGCTGTCTGGGAATaGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTT +
Preference number: 3 (lower is better)
Translates to: SWSLHPHTAVWE*KKGIPKPEGMF
Trigger: AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTGAGGGTGCAGGGACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp GTGACAAGAGTTCTTTCTCCCACTCAGGGGAGCCTTTaGCCTTCACCCACCAAGTCCCCAGTATCAGGGACC +
Preference number: 3 (lower is better)
Translates to: VTRVLSPTQGSL*PSPTKSPVSGT
Trigger: GGTCCCTGATACTGGGGACTTGGTGGGTGAAGGCCAAAGGCTCCCCTGAGTGGGAGAAAGAACTCTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp CAGGTGAAGGCTTGGTCGCATTGCGGTTTGCATAGTTaGCACAGGCATTGTGGCTCTGGTTCAGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: QVKAWSHCGLHS*HRHCGSGSATA
Trigger: GGCAGTGGCTGAACCAGAGCCACAATGCCTGTGTCAACTATGCAAACCGCAATGCGACCAAGCCTTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp CAGTATCAGGGACCCCCAATTTGTCTGACTCCCAAATaGAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: QYQGPPICLTPK*SLLLGCRTSWV
Trigger: CACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAAATTGGGGGTCCCTGATACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp CACCAAGTCCCCAGTATCAGGGACCCCCAATTTGTCTaGCTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGA +
Preference number: 3 (lower is better)
Translates to: HQVPSIRDPQFV*LPNEVSCWAAG
Trigger: TCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAAATTGGGGGTCCCTGATACTGGGGACTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 72 bp CCAGGGTCACTGGACTTCACTCAGAGGGACTGGTTCTaGAGCTCTGGAATGGATGTGGGCTGGCTACATTCA +
Preference number: 3 (lower is better)
Translates to: PGSLDFTQRDWF*SSGMDVGWLHS
Trigger: TGAATGTAGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAGTCCCTCTGAGTGAAGTCCAGTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR GCA 72 bp ACCTCAGCACACTTCCCCTACCCTAAGATGCCACCCTaGAGCGGCCTCTTCCTACACATGAATGTTCACCTC +
Preference number: 3 (lower is better)
Translates to: TSAHFPYPKMPP*SGLFLHMNVHL
Trigger: GAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTTAGGGTAGGGGAAGTGTGCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp AGGGACTGGTTCTGCAGCTCTGGAATGGATGTGGGCTaGCTACATTCAGAGCCAGCTGCCCACAGAATCTTG +
Preference number: 3 (lower is better)
Translates to: RDWFCSSGMDVG*LHSEPAAHRIL
Trigger: CAAGATTCTGTGGGCAGCTGGCTCTGAATGTAGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp GCCACTGCCAGAAGACAGTGGATGCCAGTGTCTGGTTaGGCAAGAGAAGACCGACTACAATTGGCGTCCCAA +
Preference number: 3 (lower is better)
Translates to: ATARRQWMPVSG*AREDRLQLASQ
Trigger: TTGGGACGCCAATTGTAGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATCCACTGTCTTCTGGCAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 72 bp TCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTaGAGCCTCTTCTCGGCTTGGAAAGCCTGTCCTGAC +
Preference number: 3 (lower is better)
Translates to: SITGSTRLCSVY*SLFSAWKACPD
Trigger: GTCAGGACAGGCTTTCCAAGCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CAA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCTATCCCTGGATGAACTaGGATGCAGGTGAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGYPWMN*DAGEGL
Trigger: CAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATA...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR GCA 72 bp TCACGCTCAGTCTCTGAACCTCCCCTACTGAGTAGCTaGTCTGGCCTCAAAGTACTGTGGAGACTCAGAGTG +
Preference number: 3 (lower is better)
Translates to: SRSVSEPPLLSS*SGLKVLWRLRV
Trigger: CACTCTGAGTCTCCACAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGGAGGTTCAGAGACTGAGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CCA 72 bp CACAGCGCAGCAGTCACTGGCATATTCACATTATGGTaGGATTGGCTCAAAAAGGCCTGCCCCTCCAACACC +
Preference number: 3 (lower is better)
Translates to: HSAAVTGIFTLW*DWLKKACPSNT
Trigger: GGTGTTGGAGGGGCAGGCCTTTTTGAGCCAATCCCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CCA 72 bp GCAGCAGTCACTGGCATATTCACATTATGGTGGGATTaGCTCAAAAAGGCCTGCCCCTCCAACACCATGGCA +
Preference number: 3 (lower is better)
Translates to: AAVTGIFTLWWD*LKKACPSNTMA
Trigger: TGCCATGGTGTTGGAGGGGCAGGCCTTTTTGAGCCAATCCCACCATAATGTGAATATGCCAGTGACTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGAAGACCGACTACAATaGGCGTCCCAAAAGGAATAT +
Preference number: 3 (lower is better)
Translates to: SCEGALRPLESAIEGHPSEDRLQ*ASQKEY
Trigger: ATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTTC...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR-3UTR CAA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTAGGAATATAACCTGCTaGATTTTCTGTGCACTCCAG +
Preference number: 3 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTRNITC*IFCALQ
Trigger: CTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp GACCTTATGATAGGTAGGAGCAGGGTGAGCTTGAAGTaGGCTTTTCAAAAGACGACCCAGACATGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: DLMIGRSRVSLK*AFQKTTQTCQH
Trigger: GTGCTGGCATGTCTGGGTCGTCTTTTGAAAAGCTCACTTCAAGCTCACCCTGCTCCTACCTATCATAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR-3UTR CAA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTGTGTTAGAACTCCTCTaGCCTATGTTAAAATGTGAA +
Preference number: 3 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPVLELL*PMLKCE
Trigger: TTCACATTTTAACATAGGCAAGAGGAGTTCTAACAC...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 72 bp GGTTTCAGACAGGGAGTGGAGGCTGAGAGAAGGGAATaGATTTGTCTGACATCTCACTGCCATTTAGTGACA +
Preference number: 3 (lower is better)
Translates to: GFRQGVEAERRE*ICLTSHCHLVT
Trigger: TGTCACTAAATGGCAGTGAGATGTCAGACAAATTCATTCCCTTCTCTCAGCCTCCACTCCCTGTCTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR TCA 72 bp TTAATGTATTGTGTAATGGATGAAATGACAGAGTTGTaGAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGA +
Preference number: 3 (lower is better)
Translates to: LMYCVMDEMTEL*RGPSPSGVGYR
Trigger: TCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACTCTGTCATTTCATCCATTACACAATACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp TCAGGACAACCCCAAGTCCCTCCTTTAGAAGAATGGTaGATTAAATTGTGGCGTATGGTACAATGGGTAATT +
Preference number: 3 (lower is better)
Translates to: SGQPQVPPLEEW*IKLWRMVQWVI
Trigger: AATTACCCATTGTACCATACGCCACAATTTAATTCACCATTCTTCTAAAGGAGGGACTTGGGGTTGTCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR TCA 72 bp TTGTGGCGTATGGTACAATGGGTAATTATACAGCCGTaGACAGTTATTATACAGTATTTACTTAATGGCACT +
Preference number: 3 (lower is better)
Translates to: LWRMVQWVIIQP*TVIIQYLLNGT
Trigger: AGTGCCATTAAGTAAATACTGTATAATAACTGTTCACGGCTGTATAATTACCCATTGTACCATACGCCACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTTCCCCGGCTGCACAGTaGTCCGTCCCCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPASPAAQ*SVPRPL
Trigger: CAGCGGCCTGGGGACGGAGCACTGTGCAGCCGGGGA...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGGGGCCCAGGACTGCTaGGGTTGGCGTGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAGAQDC*GWRAAP
Trigger: GGGAGCAGCACGCCAACCCCAGCAGTCCTGGGCCCC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCTGCAGGTGCAGCCGTaGGTCTACGGCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPALQVQP*VYGPAP
Trigger: AGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGTGAGTCTACGGCCCTaGCCCTCAGCTCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAVSLRP*PSAPRL
Trigger: CAGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCAC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCTGGGGTTGGCGTGCTaGTCCCTGCAGGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPALGLAC*SLQVQP
Trigger: CGGCTGCACCTGCAGGGAGCAGCACGCCAACCCCAG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCAGGGGGCCCAGGACTaGTGGGGTTGGCGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAQGAQD*WGWRAA
Trigger: AGCAGCACGCCAACCCCAGCAGTCCTGGGCCCCCTG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTAGAGCTGTTCATTGGTaGCCCCCGGGCGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPARAVHW*PPGAGS
Trigger: GGACCCTGCGCCCGGGGGTCACCAATGAACAGCTCT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCCGTCCCCAGGCCGCTaGCCACACTCACAACCCCTT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAPSPGR*PHSQPL
Trigger: AAGGGGTTGTGAGTGTGGTCAGCGGCCTGGGGACGG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCCCTCCACTGTAGGTTaGGCACTCTCCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAPSTVG*ALSQGA
Trigger: GGCCCCCTGGGAGAGTGCTCAACCTACAGTGGAGGG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGCTGCTCCCTGCAGGTaGAGCCGTGAGTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAAAPCR*SRESTA
Trigger: GGCCGTAGACTCACGGCTGCACCTGCAGGGAGCAGC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCTGCTGGGGTTGGCGTaGTGCTCCCTGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPALLGLA*CSLQVQ
Trigger: CTGCACCTGCAGGGAGCAGCACGCCAACCCCAGCAG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPALSGCS*PGLSPA
Trigger: AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCAGGACTGCTGGGGTTaGCGTGCTGCTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAQDCWG*RAAPCR
Trigger: CCTGCAGGGAGCAGCACGCCAACCCCAGCAGTCCTG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTTGGCGTGCTGCTCCCTaGAGGTGCAGCCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAWRAAP*RCSRES
Trigger: AGACTCACGGCTGCACCTGCAGGGAGCAGCACGCCA...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGCACCAGGATGGGCATaGGCAGGACCACTCGCGTCA +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAAPGWA*AGPLAS
Trigger: TGACGCGAGTGGTCCTGCCCATGCCCATCCTGGTGC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGGGGTAGCACCAGGATaGGCATGGGCAGGACCACTC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAGVAPG*AWAGPL
Trigger: GAGTGGTCCTGCCCATGCCCATCCTGGTGCTACCCC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGGCAGCCTTGGTGGCTaGAGAAGCTCCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAGSLGG*RSSAEG
Trigger: GCCTTCTGCGGAGCTTCTCCAGCCACCAAGGCTGCC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CAA 72 bp GGGACACCAGGGGTGCAGCACCATCGCAGGCGTGGCTaGTGTTCTCGCACAGCTGGCCAGCCCCGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GTPGVQHHRRRG*CSRTAGQPRPD
Trigger: GTCAGGGCGGGGCTGGCCAGCTGTGCGAGAACACAAGCCACGCCTGCGATGGTGCTGCACCCCTGGTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTACACCACTGTCCGGCTaGTCGTGGCCTGGGCTATCT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPATPLSG*SWPGLS
Trigger: AGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPARLLVA*AISGSN
Trigger: ATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGGCGGGTGGCTGGGGTaGACTTGTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAGGWLG*TCWLSE
Trigger: TTCAGAAAGCCAACAAGTTCACCCCAGCCACCCGCC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTTCTCCAGCATGGACATaGCGATCGGGGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPASPAWT*RSGVAP
Trigger: TGGTGCTACCCCCGATCGTCATGTCCATGCTGGAGA...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCCAGTGCCCCGGCAGCTaGGCAAGAGCTCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACQCPGS*ARAQGS
Trigger: GCTCCCCTGAGCTCTTGCTCAGCTGCCGGGGCACTG...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTAGGAGCCCACGAGGTTaGCATCGCTGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPARSPRG*HRCPGH
Trigger: ATGTCCTGGACAGCGATGGCAACCTCGTGGGCTCCT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGGAGCAGCCGGGGGCGTaGCTGCAGGAGAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QPLVVHHCPAARGLGYLREQPGA*LQESRP
Trigger: AGGACGGCTCTCCTGCAGGCACGCCCCCGGCTGCTC...CCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCCTGCAGGTGCAGCCGTaGGTCTACGGCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPLQVQP*VYGPAP
Trigger: AGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAG...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGAGCCGGGGGCGTGCCTaGAGGAGAGCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWSRGRA*RRAVFS
Trigger: GGAGAAGACGGCTCTCCTGCAGGCACGCCCCCGGCT...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGTGGATGCCAGTGTCTaGTTGGGCAAGAGAAGACCG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAVDASV*LGKRRP
Trigger: CGGTCTTCTCTTGCCCAACCAGACACTGGCATCCAC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGAGAAGGCGGGTGGCTaGGGTGAACTTGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAEKAGG*GELVGF
Trigger: AAAGCCAACAAGTTCACCCCAGCCACCCGCCTTCTC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPANGTNL*MRRRVA
Trigger: AGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACGGCGACACATGGGTATaGCCCCACCATCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHGDTWV*PHHQAQ
Trigger: CTGGGCCTGATGGTGGGGCCATACCCATGTGTCGCC...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGAGGGCACCAGGCCTCTaGCAGGGGGAGGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLRAPGL*QGEGGK
Trigger: CTTCCCGCCCTCCCCCTGCCAGAGGCCTGGTGCCCT...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTTTGCGGGAAGAGGCTaGTGGCCAGCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NPLLYTTVRLLVAWAISGFAGRG*WPAAGP
Trigger: TGGCCCTGCCGCTGGCCATCAGCCTCTTCCCGCAAA...GCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR TCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCGCAGCAAGGGGCCTCTaGGGCTGCCAGAGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPAARGL*GCQSER
Trigger: CCTCTCACTCTGGCAGCCTCAGAGGCCCCTTGCTGC...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCAGCCGCCGCCGCCGATaGTGTAGTCGCTGTATCCGC +
Preference number: 4 (lower is better)
Translates to: NPLLYTTVRLLVAWAISGSRRRR*CSRCIR
Trigger: GCGGATACAGCGACTACAGCATCGGCGGCGGCGGCT...GCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCCAGAAGACAGTGGATaGCAGTGTCTGGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAPEDSG*QCLVGQ
Trigger: TTGCCCAACCAGACACTGGCATCCACTGTCTTCTGG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGGGGTCAGGAGGGGGCTaGACTGAGGCTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWGSGGG*TEAGAS
Trigger: GGAAGCACCAGCCTCAGTGCAGCCCCCTCCTGACCC...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCAGCCGGGGGCGTGCCTaGAGGAGAGCCGTCCTACAG +
Preference number: 4 (lower is better)
Translates to: HNPLLYTTVRLLVAWAISSRGRA*RRAVLQ
Trigger: CTGTAGGACGGCTCTCCTGCAGGCACGCCCCCGGCT...GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTACTGCCAGAAGACAGTaGATGCCAGTGTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPATARRQ*MPVSGW
Trigger: CCAACCAGACACTGGCATCCACTGTCTTCTGGCAGT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTTTGACACAGGCATTGTaGCTCTGGTTCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPALTQAL*LWFSHC
Trigger: GCAGTGGCTGAACCAGAGCCACAATGCCTGTGTCAA...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp CAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: QPLVVHHCPAARGLGYLRLSGCS*PGLSPA
Trigger: AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAG...CCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGGCCCAGGACTGCTaGGGTTGGCGTGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELGAQDC*GWRAAP
Trigger: GGGAGCAGCACGCCAACCCCAGCAGTCCTGGGCCCC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGTGCTGCAGAGCCAGCTaGTGGGCACCAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLCCRAS*WAPAAG
Trigger: GCCAGCCGCTGGTGCCCACCAGCTGGCTCTGCAGCA...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTACTGCTGTCTGGGAATaGAAGAAGGGCATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPATAVWE*KKGIPK
Trigger: CTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp ACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGAGAGCTGTTCATTGGTaGCCCCCGGGCGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TTPCCTPLSGCSWPGLSPRAVHW*PPGAGS
Trigger: GGACCCTGCGCCCGGGGGTCACCAATGAACAGCTCT...CGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCACAGGGCGTGTCGGGCTaGGATCTTGGAGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSQGVSG*DLGGAH
Trigger: GTGGGCTCCTCCAAGATCGCAGCCCGACACGCCCTG...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCAGCCGGGGGCGTaGCTGCAGGAGAGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLEQPGA*LQESRL
Trigger: AAGACGGCTCTCCTGCAGGCACGCCCCCGGCTGCTC...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp ACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGGCCAGGCCGAAGGCTaGCAGGCACACGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TTPCCTPLSGCSWPGLSPGQAEG*QAHEAL
Trigger: CAAAGCCTCGTGTGCCTGGCAGCCTTCGGCCTGGCC...CGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGGATGAGGGGTCACCCTaGTCACACCCACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWDEGSP*SHPPQA
Trigger: AGCCTGGGGTGGGTGTGAGCAGGGTGACCCCTCATC...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCCCCCTCAGGGCAATGTaGTGCAGAGCCAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPPLRAM*CRASWW
Trigger: CCACCAGCTGGCTCTGCAGCACATTGCCCTGAGGGG...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGGAGTGGCTGAGGCTTaGGTGCGGGGGCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSGVAEA*VRGPHS
Trigger: AGAGTGAGGCCCCCGCACGCAAGCCTCAGCCACTCC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTATGCAGGTGAAGGCTTaGTCGCATTGCGGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAMQVKA*SHCGLH
Trigger: ATGCAAACCGCAATGCGACCAAGCCTTCACCTGCAT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCGGGGTAGCACCAGGATaGGCATGGGCAGGACCACTC +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPGVAPG*AWAGPL
Trigger: GAGTGGTCCTGCCCATGCCCATCCTGGTGCTACCCC...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACCAGCAGAGTGGGGCATaGGTGCTGGGTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHQQSGA*VLGEGF
Trigger: GAAACCTTCACCCAGCACCCATGCCCCACTCTGCTG...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTAACTTGTTGGCTTTCTaGACCAGGACATTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPANLLAF*TRTLRP
Trigger: GGGCCTTAATGTCCTGGTTCAGAAAGCCAACAAGTT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR TCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGTTTGCGGGAAGAGGCTaGTGGCCAGCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELFAGRG*WPAAGP
Trigger: TGGCCCTGCCGCTGGCCATCAGCCTCTTCCCGCAAA...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGCCTCCAGTGCTCCCTaGTTCCCTGGGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELASSAP*FPGPLP
Trigger: AGGCAGTGGCCCAGGGAATCAGGGAGCACTGGAGGC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACACCCCTTGGCTCACCTaGAGCTGCATTTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHTPWLT*SCIWEH
Trigger: ATGCTCCCAAATGCAGCTTCAGGTGAGCCAAGGGGT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGGTCGCATTGCGGTTTaGATAGTTGACACAGGCATT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAGRIAV*IVDTGI
Trigger: AATGCCTGTGTCAACTATGCAAACCGCAATGCGACC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGGCCAGGCCGAAGGCTaGCAGGCACACGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQGQAEG*QAHEAL
Trigger: CAAAGCCTCGTGTGCCTGGCAGCCTTCGGCCTGGCC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGTCCCCTACCCTAAGATaGCACCCTGCAGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWSPTLR*HPAAAS
Trigger: AGAGGCCGCTGCAGGGTGGCATCTTAGGGTAGGGGA...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCTCAAGACAGATGTCCTaGCTCAGTGCCCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACSRQMS*LSAPRH
Trigger: GTGCCTGGGGGCACTGAGGCAGGACATCTGTCTTGA...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACGAGAAGGCGGGTGGCTaGGGTGAACTTGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHEKAGG*GELVGF
Trigger: AAAGCCAACAAGTTCACCCCAGCCACCCGCCTTCTC...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGGTCGGGCTGCGATCTTaGAGGAGCCCACGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLVGLRS*RSPRGC
Trigger: GCAACCTCGTGGGCTCCTCCAAGATCGCAGCCCGAC...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGCTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQLSGCS*PGLSPA
Trigger: AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAG...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGTGGGGCAGGCAGCCTTaGTGGCTGGAGAAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQWGRQP*WLEKLR
Trigger: GCGGAGCTTCTCCAGCCACCAAGGCTGCCTGCCCCA...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGTGCAGAGCCAGCTGGTaGGCACCAGCGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQCRASW*APAAGR
Trigger: TCTGCCAGCCGCTGGTGCCCACCAGCTGGCTCTGCA...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGTGCTCCTCAGGAGAGTaGCAGGCCCCTCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWCSSGE*QAPQGN
Trigger: ATTGCCCTGAGGGGCCTGCCACTCTCCTGAGGAGCA...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGCTCACGGGCAGCAGGTaGGCTGCTCCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLLTGSR*AAPQES
Trigger: ACTCTCCTGAGGAGCAGCCCACCTGCTGCCCGTGAG...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCGCATGCAGAAGGTCCTaGCAGCTTGAGCGTCCACTC +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACACRRS*QLERPL
Trigger: GAGTGGACGCTCAAGCTGCCAGGACCTTCTGCATGC...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CAA 72 bp CGTCGGCCAGCTCGACTCCACGGCCAGCTTGACATCTaGGTCCCTGCACCCTCACACTGCTGTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RRPARLHGQLDI*VPAPSHCCLGM
Trigger: CATTCCCAGACAGCAGTGTGAGGGTGCAGGGACCAAGATGTCAAGCTGGCCGTGGAGTCGAGCTGGCCGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTGGCGGGTGGCTGGGGTaGACTTGTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPAGGWLG*TCWLSE
Trigger: TTCAGAAAGCCAACAAGTTCACCCCAGCCACCCGCC...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR TCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAACCCTCCACTGTAGGTTaGGCACTCTCCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQPSTVG*ALSQGA
Trigger: GGCCCCCTGGGAGAGTGCTCAACCTACAGTGGAGGG...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACCCAGTGGGAACCCCTTaGTCCAGTCTTCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHPVGTP*SSLLVS
Trigger: TGAAACCAGAAGACTGGATCAAGGGGTTCCCACTGG...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCATCCACCTGCAATGCTaGGCGGGGTGGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGIHLQC*AGWPQS
Trigger: GCTCTGGGGCCACCCCGCTCAGCATTGCAGGTGGAT...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCAGCCGCCGCCGCCGATaGTGTAGTCGCTGTATCCGC +
Preference number: 4 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGSRRRR*CSRCIR
Trigger: GCGGATACAGCGACTACAGCATCGGCGGCGGCGGCT...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCACACCACTGTCCGGCTaGTCGTGGCCTGGGCTATCT +
Preference number: 4 (lower is better)
Translates to: HNPLLYTTVRLLVAWAISTPLSG*SWPGLS
Trigger: AGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGT...GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTGTGAGTCTACGGCCCTaGCCCTCAGCTCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSVSLRP*PSAPRL
Trigger: CAGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCAC...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGTGGCGTGCTGCTCCCTaGAGGTGCAGCCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLWRAAP*RCSRES
Trigger: AGACTCACGGCTGCACCTGCAGGGAGCAGCACGCCA...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCCTGCTGGGGTTGGCGTaGTGCTCCCTGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RFPLTGLSKARPGPSGIALLGLA*CSLQVQ
Trigger: CTGCACCTGCAGGGAGCAGCACGCCAACCCCAGCAG...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTCAGGGGGCCCAGGACTaGTGGGGTTGGCGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPQGAQD*WGWRAA
Trigger: AGCAGCACGCCAACCCCAGCAGTCCTGGGCCCCCTG...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCACCCGAAGAGGCCAAGTaGAGGTCCATGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSPEEAK*RSMVPA
Trigger: GGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGG...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGAGGTCCAAAGGGGCCTaGCCCCTTCCCAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELRSKGA*PLPSPE
Trigger: CTCTGGACTGGGAAGGGGGCAGGCCCCTTTGGACCT...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGAGAGGCAACGGCCATaGCCATGGAAGGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQERQRP*PWKAHL
Trigger: GAGGTGGGCCTTCCATGGGCATGGCCGTTGCCTCTC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCTGGATCCTTTGCCACTaGACCGCCACAGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPWILCH*TATGAD
Trigger: GTCTGCTCCTGTGGCGGTGCAGTGGCAAAGGATCCA...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCAGGCATGAACCAATCTaGCCCTCAGGCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPRHEPI*PSGLPS
Trigger: GGAAGGGAGGCCTGAGGGGCAGATTGGTTCATGCCT...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCAGGGACACCAGGGGTaGAGCACCATCGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPQGHQG*STIAGV
Trigger: CACGCCTGCGATGGTGCTGCACCCCTGGTGTCCCTG...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACACTGCCAGAAGACAGTaGATGCCAGTGTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHTARRQ*MPVSGW
Trigger: CCAACCAGACACTGGCATCCACTGTCTTCTGGCAGT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAACAGGACTGCTGGGGTTaGCGTGCTGCTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQQDCWG*RAAPCR
Trigger: CCTGCAGGGAGCAGCACGCCAACCCCAGCAGTCCTG...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AACCTGTCTCCCAAATCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTGCGGGCGGGCTCAGGGGTaGGACAAGCATGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: NLSPKSLPGLALRQASTCGRAQG*DKHAEG
Trigger: ACCTTCTGCATGCTTGTCCCACCCCTGAGCCCGCCC...GCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGAGACAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTCCGTCCCCAGGCCGCTaGCCACACTCACAACCCCTT +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPPSPGR*PHSQPL
Trigger: AAGGGGTTGTGAGTGTGGTCAGCGGCCTGGGGACGG...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGCAAGGCCTTCTGCTaGGGCCAACTGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELGKAFC*GQLQVQ
Trigger: TTGGACCTGCAGTTGGCCTCAGCAGAAGGCCTTGCC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAAAGGAGGGGGCTGCACTaGGGCTGGTGCTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKRRGLH*GWCFPL
Trigger: CAGGGGGAAGCACCAGCCTCAGTGCAGCCCCCTCCT...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGGCATGGGTGCTGGGTaGAGGTTTCCCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQGMGAG*RFPLTG
Trigger: ACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAACCTCCACCCCAGGCATaGACCAATCTGCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQPPPQA*TNLPLR
Trigger: CCTGAGGGGCAGATTGGTTCATGCCTGGGGTGGAGG...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTAGCCGCCGCCGCCGATaGTGTAGTCGCTGTATCCGC +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPSRRRR*CSRCIR
Trigger: GCGGATACAGCGACTACAGCATCGGCGGCGGCGGCT...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGCAGTTGGAAAGGAGGTaGATCGCTCGAGGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLQLERR*IARGAS
Trigger: GCTAGCGCCTCGAGCGATGCACCTCCTTTCCAACTG...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCTGCTTGATTTTCTGTaGACTCCAGAGCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPALLDFL*TPELFI
Trigger: AATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR GCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGACACCACTGTCCGGCTaGTCGTGGCCTGGGCTATCT +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELTPLSG*SWPGLS
Trigger: AGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGT...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTGCTGCTCCCTGCAGGTaGAGCCGTGAGTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFAAPCR*SRESTA
Trigger: GGCCGTAGACTCACGGCTGCACCTGCAGGGAGCAGC...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGCTTCTCGGGGTTTCCTaGCTGGAGCTGGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLLLGVS*LELGSL
Trigger: AAGTGACCCCAGCTCCAGGCAGGAAACCCCGAGAAG...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGGCAAAGACGAGGTCTTaGTGGAGGAGCCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWAKTRS*WRSQWE
Trigger: TTCCCACTGGCTCCTCCAGCAAGACCTCGTCTTTGC...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGACTCTTCCGAGCAGAGTaGTGGGCAACCGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLESAIEGHPSGDPETARLFRAE*WATAAP
Trigger: TGGGGCTGCGGTTGCCCAGCACTCTGCTCGGAAGAG...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGCAGGGAGCCACACCTaGCGTACCCTCACGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGAGSHT*RTLTLS
Trigger: ACTGAGCGTGAGGGTACGGCAGGTGTGGCTCCCTGC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp CAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGGTGGATGCCAGTGTCTaGTTGGGCAAGAGAAGACCG +
Preference number: 4 (lower is better)
Translates to: QPLVVHHCPAARGLGYLRVDASV*LGKRRP
Trigger: CGGTCTTCTCTTGCCCAACCAGACACTGGCATCCAC...CCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp AACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCGAGAAGGCGGGTGGCTaGGGTGAACTTGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NPLLYTTVRLLVAWAISGEKAGG*GELVGF
Trigger: AAAGCCAACAAGTTCACCCCAGCCACCCGCCTTCTC...GCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp CAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QPLVVHHCPAARGLGYLRNGTNL*MRRRVA
Trigger: AGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTT...CCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp TCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: SQPLVVHHCPAARGLGYLRLLVA*AISGSN
Trigger: ATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCG...GAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGTCGGGGTTTCCTGCCTaGAGCTGGGGTCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELSGFPA*SWGHFR
Trigger: CCTGAAGTGACCCCAGCTCCAGGCAGGAAACCCCGA...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTGTGGGCACCAGCGGCTaGCAGAGAGGCAACGGCCAT +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSVGTSG*QRGNGH
Trigger: ATGGCCGTTGCCTCTCTGCCAGCCGCTGGTGCCCAC...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTGCCCCTCCAACACCATaGCACCCCCACACTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSAPPTP*HPHTPA
Trigger: AGCGGGAGTGTGGGGGTGCCATGGTGTTGGAGGGGC...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGCACCATCGCAGGCGTaGCTTGTGTTCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQAPSQA*LVFSHS
Trigger: GCTGTGCGAGAACACAAGCCACGCCTGCGATGGTGC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGCTGCAAAGGCCCCTaGGAGTGGCTGAGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSRCKGP*EWLRLA
Trigger: CGCAAGCCTCAGCCACTCCCAGGGGCCTTTGCAGCG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTTTCCGAGCAGAGTGCTaGGCAACCGCAGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTFRAEC*ATAAPL
Trigger: GAGTGGGGCTGCGGTTGCCCAGCACTCTGCTCGGAA...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGCGGGTGGCTGGGGTaGACTTGTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELGGWLG*TCWLSE
Trigger: TTCAGAAAGCCAACAAGTTCACCCCAGCCACCCGCC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGCTGAGGCTGCCAGAGTaGGAGGCGACACATGGGTAT +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLLRLPE*EATHGY
Trigger: ATACCCATGTGTCGCCTCTCACTCTGGCAGCCTCAG...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGCTGCACAGCCTCTCTaGGACGTCTCTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGAAQPL*DVSEPR
Trigger: CCTGGGTTCAGAGACGTCTCAGAGAGGCTGTGCAGC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTAAGGTCCTGGCAGCTTaGGCGTCCACTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCEGALRPLESAIEGHPSKVLAA*ASTLAL
Trigger: CAGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTT...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCAGTTGGAAAGGAGGTaGATCGCTCGAGGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: SQPLVVHHCPAARGLGYLQLERR*IARGAS
Trigger: GCTAGCGCCTCGAGCGATGCACCTCCTTTCCAACTG...GAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTCCAGAAGACAGTGGATaGCAGTGTCTGGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPAPEDSG*QCLVGQ
Trigger: TTGCCCAACCAGACACTGGCATCCACTGTCTTCTGG...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGCCTAAGATGCCACCCTaGAGCGGCCTCTTCCTACAC +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQPKMPP*SGLFLH
Trigger: GTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTTAGG...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCTCAGGGCAATGTGCTaGAGAGCCAGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPLRAMC*RASWWA
Trigger: TGCCCACCAGCTGGCTCTGCAGCACATTGCCCTGAG...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AACCTGTCTCCCAAATCCTTGCCTGGCCTGGCCCTCAGACAAGCATCCACCTGCCCTCACCTCCCCACCTaGTCTCCATTACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NLSPKSLPGLALRQASTCPHLPT*SPLQGA
Trigger: TGCTCCCTGTAATGGAGAGCAGGTGGGGAGGTGAGG...GCAGGTGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGAGACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGATGTCCTGCCTCAGTaGCCCCAGGCACAACCTCAC +
Preference number: 4 (lower is better)
Translates to: SCEGALRPLESAIEGHPSDVLPQ*PQAQPH
Trigger: GTGAGGTTGTGCCTGGGGGCACTGAGGCAGGACATC...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCCCTGACTGTGTCACTTaGCCCTGGCCTCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGPDCVT*PWPPLG
Trigger: TCCCAGAGGAGGCCAGGGGCAAGTGACACAGTCAGG...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGATCGCCCAGTCTGGAGTaGAGGGGCACAATCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLESAIEGHPSGDPETARSPSLE*RGTIVA
Trigger: AGCCACGATTGTGCCCCTGCACTCCAGACTGGGCGA...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTAAGACCGACTACAATTaGCGTCCCAAAAGGAATATA +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAKTDYN*RPKRNI
Trigger: TATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CCA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTACTGCCAGAAGACAGTaGATGCCAGTGTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPATARRQ*MPVSGW
Trigger: CCAACCAGACACTGGCATCCACTGTCTTCTGGCAGT...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTTTGACACAGGCATTGTaGCTCTGGTTCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPALTQAL*LWFSHC
Trigger: GCAGTGGCTGAACCAGAGCCACAATGCCTGTGTCAA...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTGCACCAGGATGGGCATaGGCAGGACCACTCGCGTCA +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPAPGWA*AGPLAS
Trigger: TGACGCGAGTGGTCCTGCCCATGCCCATCCTGGTGC...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: RFPLTGLSKARPGPSGIARLLVA*AISGSN
Trigger: ATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCG...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGACTCCAGGCCTAATCTaGCTCGCCTCCACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLTPGLI*LASTCP
Trigger: AGGACAGGTGGAGGCGAGCCAGATTAGGCCTGGAGT...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTTCCCCCTGGTTTGGGCCTTTCAGATGAGGGGTCACCCTGCTCACACCCACCCGGAATGGATGTGGGCTaGCTACATTCAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPGLGLSDEGSPCSHPPGMDVG*LHSEPA
Trigger: AGCTGGCTCTGAATGTAGCCAGCCCACATCCATTCC...GGGTGGGTGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCACTGCTTAGAAAGGGATaGGATGGGGCAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSLLRKG*DGAGSL
Trigger: AAGGCTGCCTGCCCCATCCCATCCCTTTCTAAGCAG...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGTGCTGGAGGAGCCAGTaGGAACCCCTTGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLCWRSQ*EPLDPV
Trigger: GACTGGATCAAGGGGTTCCCACTGGCTCCTCCAGCA...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACCAGCGCAGCAGTCACTaGCATATTCACATTATGGTG +
Preference number: 4 (lower is better)
Translates to: AEACVRGPHSHWARLEDHQRSSH*HIHIMV
Trigger: CACCATAATGTGAATATGCCAGTGACTGCTGCGCTG...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAAAAAGGCCCCTGGGAGTaGCTGAGGCTTGCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKKGPWE*LRLACG
Trigger: CCCGCACGCAAGCCTCAGCCACTCCCAGGGGCCTTT...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTATCTCCGGCTCTAATTaGGATGTTTCAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: APCRCSRESTALPLSSPAISGSN*DVSISP
Trigger: TGGAGAAATTGAAACATCCCAATTAGAGCCGGAGAT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411783.5
CDS-3UTR CCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCGTCTTCAGGAAGAGCTaGACGTGTGACACCAGTAAG +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACVFRKS*TCDTSK
Trigger: CTTACTGGTGTCACACGTCCAGCTCTTCCTGAAGAC...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCGTCCACTCTGGCTCTaGCCCAGGGCCCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: STRTMIPFTQAFPFKATQRPLWL*PRALTV
Trigger: CACAGTCAGGGCCCTGGGCCAGAGCCAGAGTGGACG...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGGCTGCAGGACAAGCTaGGTGGCAGGTCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGGCRTS*VAGQQS
Trigger: AGACTGCTGACCTGCCACCCAGCTTGTCCTGCAGCC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTTGCGGTTTGCATAGTTaGCACAGGCATTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPACGLHS*HRHCGS
Trigger: AGAGCCACAATGCCTGTGTCAACTATGCAAACCGCA...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR TCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAAGGGCATGTTTGAAGTaGCCAGAGGAGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQRACLK*PEEGQA
Trigger: TGCCTGGCCCTCCTCTGGTCACTTCAAACATGCCCT...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGCGGCTCATAACCAGGTaGAAGGGGTCCGTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWRLITR*KGSVGQ
Trigger: CTGGCCGACGGACCCCTTTCACCTGGTTATGAGCCG...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTCTGAACCTCCCCTACTaGGTAGCTGCTCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTLNLPY*VAALAS
Trigger: TGAGGCCAGAGCAGCTACTCAGTAGGGGAGGTTCAG...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAGATTCCCTGGGCCACTaGCTGAGGACCCTAGTCATG +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQDSLGH*LRTLVM
Trigger: CATGACTAGGGTCCTCAGGCAGTGGCCCAGGGAATC...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGTCTTCCTTCCTGGTCTaGAAATGGGAGGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLSSFLV*KWEGDG
Trigger: CCCATCTCCCTCCCATTTGCAGACCAGGAAGGAAGA...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGCTATCTGGATCCTTTaGCACTGCACCGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLAIWIL*HCTATG
Trigger: TCCTGTGGCGGTGCAGTGGCAAAGGATCCAGATAGC...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTCCTCCTCTAGGCTCCTaGCCTTTTCCCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPPPLGS*PFPRPE
Trigger: CTCTGGCCTGGGAAAAGGGCAGGAGCCTAGAGGAGG...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAGGGAGCACCAGGTTGTaGTCTGTCTACTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLESAIEGHPSGDPETARGSTRL*SVYWSL
Trigger: GAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCC...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp CAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGATGCAGGTGAAGGCTTaGTCGCATTGCGGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QPLVVHHCPAARGLGYLRMQVKA*SHCGLH
Trigger: ATGCAAACCGCAATGCGACCAAGCCTTCACCTGCAT...CCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGCTAAATTTACCAGCCTaGCCACCAAACCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWLNLPA*PPNQPN
Trigger: GTTGGGCTGGTTTGGTGGCCAGGCTGGTAAATTTAG...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTAAGACGAGGTCTTGCTaGAGGAGCCAGTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPKTRSC*RSQWEP
Trigger: GGGTTCCCACTGGCTCCTCCAGCAAGACCTCGTCTT...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGTGAGAGGCGACACATaGGTATGGCCCCACCATCAG +
Preference number: 4 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAVRGDT*VWPHHQ
Trigger: CTGATGGTGGGGCCATACCCATGTGTCGCCTCTCAC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCAAATGGGAGGGAGATaGGAGCCAGCAGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSQMGGR*EPAARG
Trigger: GCCCCTTGCTGCTGGCTCCCATCTCCCTCCCATTTG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTCAACGGCCATGCCCATaGAAGGCCCACCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFQRPCP*KAHLST
Trigger: TGTGCTGAGGTGGGCCTTCCATGGGCATGGCCGTTG...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTGGGCCTCACTCTCACTaGGCCAGGCTTGAAGACCAC +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFGPHSH*ARLEDH
Trigger: GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCC...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTTCCCAAATCCTTGCCTaGCCTGGCCCTCAGACAAGC +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTSQILA*PGPQTS
Trigger: GCTTGTCTGAGGGCCAGGCCAGGCAAGGATTTGGGA...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTACTCAGGGGAGCCTTTaGCCTTCACCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTTQGSL*PSPTKS
Trigger: GGACTTGGTGGGTGAAGGCCAAAGGCTCCCCTGAGT...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTAACTTGTTGGCTTTCTaGACCAGGACATTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPANLLAF*TRTLRP
Trigger: GGGCCTTAATGTCCTGGTTCAGAAAGCCAACAAGTT...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR TCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTTCTCCAGCATGGACATaGCGATCGGGGGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPSPAWT*RSGVAP
Trigger: TGGTGCTACCCCCGATCGTCATGTCCATGCTGGAGA...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGAGGGTGAGCTTGAAGTaGGCTTTTCAAAAGACGACC +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWRVSLK*AFQKTT
Trigger: GGTCGTCTTTTGAAAAGCTCACTTCAAGCTCACCCT...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAAACTCCACGGCCAGCTTaGCATCTTGGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKTPRPA*HLGPCT
Trigger: GGTGCAGGGACCAAGATGTCAAGCTGGCCGTGGAGT...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCCACGTTACCGAGCATaGGGAGCAGCTCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: STRTMIPFTQAFPFKATQPRYRA*GAALPS
Trigger: GCTCGGAAGAGCTGCTCCTCATGCTCGGTAACGTGG...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTGAAATGACAGAGTTGTaGAGGGGCCCTTCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTEMTEL*RGPSPS
Trigger: AGAGGGCGAAGGGCCCCTTCACAACTCTGTCATTTC...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGATGTCTGACTCCCAAATaGAGTCTCCTGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLESAIEGHPSGDPETARCLTPK*SLLLGC
Trigger: GCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACA...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTAGTCCACCAGGACAATaGTCCCCTTCACTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCEGALRPLESAIEGHPSSPPGQ*SPSLRP
Trigger: AGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGACT...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGGCATGAGACCTTCCTaGTTAGAAAGGGATGGGATG +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSGMRPS*LERDGM
Trigger: CATCCCATCCCTTTCTAAGCAGGAAGGTCTCATGCC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAATGGCTCAAAAAGGCCTaGCCCTCCAACACCATGGCA +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQWLKKA*PSNTMA
Trigger: TGCCATGGTGTTGGAGGGGCAGGCCTTTTTGAGCCA...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCCTGGGACTACAGGTGTaGCCCACTGTGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGLGLQV*PTVLSY
Trigger: ATAGCTGAGCACAGTGGGGCACACCTGTAGTCCCAG...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAATGCCAGTGTCTGGTTaGGCAAGAGAAGACCGACTA +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSMPVSG*AREDRL
Trigger: TAGTCGGTCTTCTCTTGCCCAACCAGACACTGGCAT...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPNGTNL*MRRRVA
Trigger: AGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTT...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGTGCAGATATTGGCACTaGCTACAGCAGGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLCRYWH*LQQGTA
Trigger: TGCCGTTCCCTGCTGTAGCCAGTGCCAATATCTGCA...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGCTCTGGAATGGATGTaGGCTGGCTACATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQALEWM*AGYIQS
Trigger: GCTCTGAATGTAGCCAGCCCACATCCATTCCAGAGC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGAGGTGTCTAAGGAGCTaGCCTAGGCATTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQRCLRS*PRHSQA
Trigger: TGCCTGAGAATGCCTAGGCCAGCTCCTTAGACACCT...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTGTCCAGAGTCCACACTaGGGACATGCCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFVQSPH*GHAQDD
Trigger: GTCATCCTGGGCATGTCCCCAGTGTGGACTCTGGAC...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTTGCTTCCCCCTGGTTTaGGCCTTTCAGATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPCFPLV*AFQMRG
Trigger: ACCCCTCATCTGAAAGGCCCAAACCAGGGGGAAGCA...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAAGTGGGGCATGGGTGCTaGGTGAAGGTTTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKVGHGC*VKVSPH
Trigger: GTGAGGGGAAACCTTCACCCAGCACCCATGCCCCAC...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAGCCAGCTTGACATCTTaGTCCCTGCACCCTCACACT +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQASLTS*SLHPHT
Trigger: AGTGTGAGGGTGCAGGGACCAAGATGTCAAGCTGGC...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTAATCCTTGCCTGGCCTaGCCCTCAGACAAGCATCCA +
Preference number: 4 (lower is better)
Translates to: SCEGALRPLESAIEGHPSNPCLA*PSDKHP
Trigger: TGGATGCTTGTCTGAGGGCCAGGCCAGGCAAGGATT...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CAA 72 bp AGACGAGGTCTTGCTGGAGGAGCCAGTGGGAACCCCTaGATCCAGTCTTCTGGTTTCAGACAGGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RRGLAGGASGNP*IQSSGFRQGVE
Trigger: CTCCACTCCCTGTCTGAAACCAGAAGACTGGATCAAGGGGTTCCCACTGGCTCCTCCAGCAAGACCTCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
3UTR CAA 72 bp GGTGACAAGAGTTCTTTCTCCCACTCAGGGGAGCCTTaGGCCTTCACCCACCAAGTCCCCAGTATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GDKSSFSHSGEP*AFTHQVPSIRD
Trigger: GTCCCTGATACTGGGGACTTGGTGGGTGAAGGCCAAAGGCTCCCCTGAGTGGGAGAAAGAACTCTTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAAACTTGTTGGCTTTCTaGACCAGGACATTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSNLLAF*TRTLRP
Trigger: GGGCCTTAATGTCCTGGTTCAGAAAGCCAACAAGTT...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp ACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGGATGTTTCAATCTCTaGCATTTGCGGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TTPCCTPLSGCSWPGLSPGCFNL*HLREEA
Trigger: AGCCTCTTCCCGCAAATGTCAGAGATTGAAACATCC...CGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR TCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGCCTCTTCCTACACATaGATGTTCACCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLASSYT*MFTSGL
Trigger: TAGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGC...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AGTTGTGAAGGGGCCCTTCGCCCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTCTCAGGCTGAGAAGCTaGTTCTTGTTCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SCEGALRPLESAIEGHPSLRLRS*FLFSEP
Trigger: GGGCTCAGAGAACAAGAATCAGCTTCTCAGCCTGAG...ACTAGGATGGCCTTCTATAGCCGACTCCAGAGGGCGAAGGGCCCCTTCACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCCTATGTTACTCAGGCTaGGAAGCTGATTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACLCYSG*EADSCS
Trigger: AGAACAAGAATCAGCTTCTCAGCCTGAGTAACATAG...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGTCGCATTGCGGTTTaGATAGTTGACACAGGCATT +
Preference number: 4 (lower is better)
Translates to: HNPLLYTTVRLLVAWAISGRIAV*IVDTGI
Trigger: AATGCCTGTGTCAACTATGCAAACCGCAATGCGACC...GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGGTTCATCCTGTGGGGTaGAGACCACCTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWVHPVG*RPPSLP
Trigger: GGGGAGAGAAGGTGGTCTGCACCCCACAGGATGAAC...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAAGGTTAAAAAGACGCTaGAAAGGCCCCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQRLKRR*KGPWEW
Trigger: CCACTCCCAGGGGCCTTTGCAGCGTCTTTTTAACCT...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGAGACAAGCATCCACCTaGAATGCTGAGCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: STRTMIPFTQAFPFKATQRQAST*NAERGG
Trigger: GCCACCCCGCTCAGCATTGCAGGTGGATGCTTGTCT...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTCCCCTACTGAGTAGCTaGTCTGGCCTCAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTPLLSS*SGLKVL
Trigger: CAGTACTTTGAGGCCAGAGCAGCTACTCAGTAGGGG...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTGTGGATGCCAGTGTCTaGTTGGGCAAGAGAAGACCG +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFVDASV*LGKRRP
Trigger: CGGTCTTCTCTTGCCCAACCAGACACTGGCATCCAC...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCTTGACACAGGCATTGTaGCTCTGGTTCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGLTQAL*LWFSHC
Trigger: GCAGTGGCTGAACCAGAGCCACAATGCCTGTGTCAA...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAAATCCAGCCTGGGGCCTaGAAGGAGGATCTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKIQPGA*KEDLPE
Trigger: TTCGGGAAGATCCTCCTTCCAGGCCCCAGGCTGGAT...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGCTTGATCCAGTCTTCTaGTTTCAGACAGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLLDPVF*FQTGSG
Trigger: TCCACTCCCTGTCTGAAACCAGAAGACTGGATCAAG...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTTTGTGCTCTGTCTACTaGAGCCTCTTCTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTLCSVY*SLFSAW
Trigger: CCAAGCCGAGAAGAGGCTCCAGTAGACAGAGCACAA...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAATGCGGTTTGCATAGTTaGCACAGGCATTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQCGLHS*HRHCGS
Trigger: AGAGCCACAATGCCTGTGTCAACTATGCAAACCGCA...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGTTTGGGCCTTTCAGATaGGGGGTCACCCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWFGPFR*GVTLLT
Trigger: TGTGAGCAGGGTGACCCCTCATCTGAAAGGCCCAAA...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTCTGCATTTGGGAGCATaGCGGAAATCATCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPLHLGA*RKSSGR
Trigger: TCTCCCGGATGATTTCCGTCATGCTCCCAAATGCAG...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCAAGACTCCATCTCAGTaGCAAAGAGTGTGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGKTPSQ*QRVCEG
Trigger: ACCCTCGCACACTCTTTGTCACTGAGATGGAGTCTT...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAGGAACAAGGAGGAGGTaGCAAGAGTTCTTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLESAIEGHPSGDPETARGTRRR*QEFFLP
Trigger: TGGGAGAAAGAACTCTTGTCACCTCCTCCTTGTTCC...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCCAGAAGACAGTGGATaGCAGTGTCTGGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSPEDSG*QCLVGQ
Trigger: TTGCCCAACCAGACACTGGCATCCACTGTCTTCTGG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGCATCAGGACCACATTaGAGATATTGGCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELASGPH*RYWHWL
Trigger: TAGCCAGTGCCAATATCTGCAATGTGGTCCTGATGC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTCAGAGGGACTGGTTCTaGAGCTCTGGAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPQRDWF*SSGMDV
Trigger: CACATCCATTCCAGAGCTGCAGAACCAGTCCCTCTG...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCCTGCACCCTCACACTaGTGTCTGGGAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSPAPSH*CLGMEE
Trigger: TTCTTCCATTCCCAGACAGCAGTGTGAGGGTGCAGG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCAAGACCGACTACAATTaGCGTCCCAAAAGGAATATA +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACKTDYN*RPKRNI
Trigger: TATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTT...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTTTGACACAGGCATTGTaGCTCTGGTTCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPLTQAL*LWFSHC
Trigger: GCAGTGGCTGAACCAGAGCCACAATGCCTGTGTCAA...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAACCACATTGCAGATATTaGCACTGGCTACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQPHCRY*HWLQQG
Trigger: TCCCTGCTGTAGCCAGTGCCAATATCTGCAATGTGG...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGCATAATTGTGCTGAGTaGAGTTTTGACAACCCCACA +
Preference number: 4 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWHNCAE*SFDNPT
Trigger: TGTGGGGTTGTCAAAACTCCACTCAGCACAATTATG...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAACTGGTTCTGCAGCTCTaGAATGGATGTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKLVLQL*NGCGLA
Trigger: AGCCAGCCCACATCCATTCCAGAGCTGCAGAACCAG...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCCAAGTGCAGGTCCATaGTTCCTGCCAAGCACCATT +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSPSAGP*FLPSTI
Trigger: AATGGTGCTTGGCAGGAACCATGGACCTGCACTTGG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCATGAATGTTCACCTCTaGCCTAAGTCTCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAMNVHL*PKSPLR
Trigger: CCTCAGGGGAGACTTAGGCCAGAGGTGAACATTCAT...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAACATTATGGTGGGATTaGCTCAAAAAGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQTLWWD*LKKACP
Trigger: GGGGCAGGCCTTTTTGAGCCAATCCCACCATAATGT...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCGGCCTCAAAGTACTGTaGAGACTCAGAGTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGGLKVL*RLRVSL
Trigger: TAGGCTCACTCTGAGTCTCCACAGTACTTTGAGGCC...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
3UTR CAA 72 bp CGCAGCAGTCACTGGCATATTCACATTATGGTGGGATaGGCTCAAAAAGGCCTGCCCCTCCAACACCATGGC +
Preference number: 4 (lower is better)
Translates to: RSSHWHIHIMVG*AQKGLPLQHHG
Trigger: GCCATGGTGTTGGAGGGGCAGGCCTTTTTGAGCCAATCCCACCATAATGTGAATATGCCAGTGACTGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGGATGTTTCAATCTCTaGCATTTGCGGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RFPLTGLSKARPGPSGIAGCFNL*HLREEA
Trigger: AGCCTCTTCCCGCAAATGTCAGAGATTGAAACATCC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp GACACATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTGCCTATGTTAAAATGTaGATGGGTCAGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DTWVWPHHQAQASMLPPPAYVKM*MGQSPS
Trigger: GGAGGGAGACTGACCCATTCACATTTTAACATAGGC...AGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGGCTGAGAGAAGGGAATaGATTTGTCTGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQAERRE*ICLTSH
Trigger: GTGAGATGTCAGACAAATTCATTCCCTTCTCTCAGC...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTTCTGGCCCAGGGCCCTaGCTGTGTCACTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFSGPGP*LCHLPL
Trigger: CAGGGGCAAGTGACACAGTCAGGGCCCTGGGCCAGA...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CAGAGACAGCCAGACGTAGGTACAGGGGCGGGCTCAGGGGTGGGACAAGCATGCGTATTGTGTAATGGATaGAATGACAGAGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QRQPDVGTGAGSGVGQACVLCNG*NDRVVK
Trigger: CTTCACAACTCTGTCATTTCATCCATTACACAATAC...GCATGCTTGTCCCACCCCTGAGCCCGCCCCTGTACCTACGTCTGGCTGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCAAGAGATCTTGGGCATaGAATGGGACATCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGKRSWA*NGTSHF
Trigger: GAAGTGGGATGTCCCATTTCATGCCCAAGATCTCTT...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCCAGAAGACAGTGGATaGCAGTGTCTGGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: STRTMIPFTQAFPFKATQPEDSG*QCLVGQ
Trigger: TTGCCCAACCAGACACTGGCATCCACTGTCTTCTGG...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGGTCGCATTGCGGTTTaGATAGTTGACACAGGCATT +
Preference number: 4 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGGRIAV*IVDTGI
Trigger: AATGCCTGTGTCAACTATGCAAACCGCAATGCGACC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTACATTCAGAGCCAGCTaGCCACAGAATCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFTFRAS*PQNLAE
Trigger: CTCTGCAAGATTCTGTGGGCAGCTGGCTCTGAATGT...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR GCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTCCAGGAGGCAGGGGTTaGAGTGAGCCTGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIPGGRG*SEPGGQ
Trigger: CTGTCCCCCAGGCTCACTGCAACCCCTGCCTCCTGG...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp AACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCAAGACCGACTACAATTaGCGTCCCAAAAGGAATATA +
Preference number: 4 (lower is better)
Translates to: NPLLYTTVRLLVAWAISGKTDYN*RPKRNI
Trigger: TATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTT...GCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTATGCAGGTGAAGGCTTaGTCGCATTGCGGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFMQVKA*SHCGLH
Trigger: ATGCAAACCGCAATGCGACCAAGCCTTCACCTGCAT...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAATCTCCGGCTCTAATTaGGATGTTTCAATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSISGSN*DVSISD
Trigger: GTCAGAGATTGAAACATCCCAATTAGAGCCGGAGAT...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCATCTCCGGCTCTAATTaGGATGTTTCAATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: HNPLLYTTVRLLVAWAISISGSN*DVSISD
Trigger: GTCAGAGATTGAAACATCCCAATTAGAGCCGGAGAT...GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTGTTTCAGACAGGGAGTaGAGGCTGAGAGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPVSDRE*RLREGN
Trigger: ATTCCCTTCTCTCAGCCTCCACTCCCTGTCTGAAAC...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTACTGCTCCCGGGATATaGAGTCACATACACAAGGCA +
Preference number: 4 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPTAPGI*SHIHKA
Trigger: TGCCTTGTGTATGTGACTCCATATCCCGGGAGCAGT...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGCAGGTTGGAGTGCAGTaGCTGTTCACAGCTGCAATC +
Preference number: 4 (lower is better)
Translates to: STRTMIPFTQAFPFKATQQVGVQ*LFTAAI
Trigger: GATTGCAGCTGTGAACAGCCACTGCACTCCAACCTG...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp CCTCTGGAGTCGGCTATAGAAGGCCATCCTAGTGGGGATCCAGAGACAGCCAGAATCTTGGGCATGAAATaGGACATCCCACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: PLESAIEGHPSGDPETARILGMK*DIPLHS
Trigger: GCTGTGAAGTGGGATGTCCCATTTCATGCCCAAGAT...TCTGGCTGTCTCTGGATCCCCACTAGGATGGCCTTCTATAGCCGACTCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGGACCCCCAATTTGTCTaGCTCCCAAATGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: STRTMIPFTQAFPFKATQDPQFV*LPNEVS
Trigger: GGAGACTTCATTTGGGAGTCAGACAAATTGGGGGTC...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AGGAATATAACCTGCTTGATTTTCTGTGCACTCCAGAGCTGTTCATTGGTGACCCCCCAGGCCTGCAGGTaGAGGAAGTCCACCAGGACA +
Preference number: 4 (lower is better)
Translates to: RNITCLIFCALQSCSLVTPQACR*RKSTRT
Trigger: TGTCCTGGTGGACTTCCTTCACCTGCAGGCCTGGGG...GGTCACCAATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCTGCTTGATTTTCTGTaGACTCCAGAGCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: SQPLVVHHCPAARGLGYLLLDFL*TPELFI
Trigger: AATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAG...GAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR GCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGTTGGCAAAGGTCAACTaGTCCCGGGATATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWLAKVN*SRDMES
Trigger: TGACTCCATATCCCGGGAGCAGTTGACCTTTGCCAA...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR TCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTCCTGGCTTCGGGCACTaGCAGGTCTTCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFPGFGH*QVFRKS
Trigger: GCTCTTCCTGAAGACCTGTCAGTGCCCGAAGCCAGG...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTCTGCTTGATTTTCTGTaGACTCCAGAGCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTLLDFL*TPELFI
Trigger: AATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAG...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGAAGACCGACTACAATTaGCGTCCCAAAAGGAATATA +
Preference number: 4 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLKTDYN*RPKRNI
Trigger: TATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTT...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAATGTTAAAATGTGAATaGGTCAGTCTCCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQMLKCE*VSLPPL
Trigger: CAGTGGAGGGAGACTGACCCATTCACATTTTAACAT...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGGTGGGTAGGCAGTTTTaGTCCCAAGATAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWVGRQF*SQDKVH
Trigger: GTGCACTTTATCTTGGGACCAAAACTGCCTACCCAC...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp AGGAATATAACCTGCTTGATTTTCTGTGCACTCCAGAGCTGTTCATTGGTGACCCTCTGTCGCCCAGTCTaGAGTGCAGGGGCACAATCG +
Preference number: 4 (lower is better)
Translates to: RNITCLIFCALQSCSLVTLCRPV*SAGAQS
Trigger: CGATTGTGCCCCTGCACTCCAGACTGGGCGACAGAG...GGTCACCAATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AGGAATATAACCTGCTTGATTTTCTGTGCACTCCAGAGCTGTTCATTGGTGACCCTGATTCTTGTTCTCTaGGCCCCAGGCCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RNITCLIFCALQSCSLVTLILVL*APGLQV
Trigger: CACCTGCAGGCCTGGGGCTCAGAGAACAAGAATCAG...GGTCACCAATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCTGCTTGATTTTCTGTaGACTCCAGAGCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSLLDFL*TPELFI
Trigger: AATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAG...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTGCAGGACAAGCTGGGTaGCAGGTCAGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIAGQAG*QVSSLL
Trigger: CAAGAGACTGCTGACCTGCCACCCAGCTTGTCCTGC...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTCCTTCCAGGCTCAAATaGTTCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIPSRLK*FSHLSL
Trigger: GAGGCTGAGGTGGGAGAATCATTTGAGCCTGGAAGG...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTGTGGATGCCAGTGTCTaGTTGGGCAAGAGAAGACCG +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIVDASV*LGKRRP
Trigger: CGGTCTTCTCTTGCCCAACCAGACACTGGCATCCAC...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTATATTCACATTATGGTaGGATTGGCTCAAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSIFTLW*DWLKKA
Trigger: GGCCTTTTTGAGCCAATCCCACCATAATGTGAATAT...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTGGCATATTCACATTATaGTGGGATTGGCTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSGIFTL*WDWLKK
Trigger: CTTTTTGAGCCAATCCCACCATAATGTGAATATGCC...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTAGCCTCTTCTCGGCTTaGAAAGCCTGTCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFISLFSA*KACPDS
Trigger: GGAGTCAGGACAGGCTTTCCAAGCCGAGAAGAGGCT...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp AGGAATATAACCTGCTTGATTTTCTGTGCACTCCAGAGCTGTTCATTGGTGACCAATGAAGTCTCCTGCTaGGCTGCAGGACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RNITCLIFCALQSCSLVTNEVSC*AAGQAG
Trigger: CCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATT...GGTCACCAATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTCCAAATGAAGTCTCCTaGTGGGCTGCAGGACAAGCT +
Preference number: 4 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFPNEVS*WAAGQA
Trigger: AGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGG...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTACTGCCAGAAGACAGTaGATGCCAGTGTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFTARRQ*MPVSGW
Trigger: CCAACCAGACACTGGCATCCACTGTCTTCTGGCAGT...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CCA 90 bp ACCCCAGGCTCTGCTTCCCTTTGTACAGCTTGCTCTTCCTTCCTGGTCTGCAAATCTACTTCTACCCCATaGGCACTCTACAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: TPGSASLCTACSSFLVCKSTSTP*ALYNFS
Trigger: TGAAAAATTGTAGAGTGCCCATGGGGTAGAAGTAGA...TTTGCAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTGTGATCTTCCCGCCTTaGCCTTCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFVIFPP*PSKVLG
Trigger: TCCCAACACTTTGGAAGGCCAAGGCGGGAAGATCAC...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTATGGCACTGGAAAGATaGGCAAAGGGGGTTTTACCA +
Preference number: 4 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFMALER*AKGVLP
Trigger: TGGTAAAACCCCCTTTGCTCATCTTTCCAGTGCCAT...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTAAGGAAGGGGATTTTTaGGCTGCTAAGCTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIKEGDF*AAKLSR
Trigger: TCTGCTTAGCTTAGCAGCTCAAAAATCCCCTTCCTT...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp AGGAATATAACCTGCTTGATTTTCTGTGCACTCCAGAGCTGTTCATTGGTGACCCACTTCTTGCTTTTGTaGAGACATAAGGATTTGGGA +
Preference number: 4 (lower is better)
Translates to: RNITCLIFCALQSCSLVTHFLLL*RHKDLG
Trigger: TCCCAAATCCTTATGTCTTCACAAAAGCAAGAAGTG...GGTCACCAATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR TCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTCCTTTAGAAGAATGGTaGATTAAATTGTGGCGTATG +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIPLEEW*IKLWRM
Trigger: CATACGCCACAATTTAATTCACCATTCTTCTAAAGG...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR GCA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTAAAAGGAATATAACCTaGTTGATTTTCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: TTGVPHCAQLCECCLVFIKRNIT*LIFCAL
Trigger: GAGTGCACAGAAAATCAAGCAGGTTATATTCCTTTT...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS TCA 90 bp GAACTTTGCGTCCCGGGCGGGCAGCTGCACAACCCGGAGCGACCCTaGGCAGCCGCTCGAAGCCGGGCGCTCGGGACCTTGACCGCAGCC +
Preference number: 5 (lower is better)
Translates to: ELCVPGGQLHNPERP*AAARSRALGTLTAA
Trigger: GGCTGCGGTCAAGGTCCCGAGCGCCCGGCTTCGAGCGGCTGCTCAGGGTCGCTCCGGGTTGTGCAGCTGCCCGCCCGGGACGCAAAGTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497144.5
CDS GCA 90 bp CCCGCACGCCCTGGCTGCGTCCCCTCAGGGCATCGGCCGGCTTGCTaGGTCAGCGAATCCTCAGCCCGAGATGGAGAGCAGGGACGGGGG +
Preference number: 5 (lower is better)
Translates to: PARPGCVPSGHRPAC*VSESSARDGEQGRG
Trigger: CCCCCGTCCCTGCTCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGGGCGTGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS GCA 90 bp TCCCCCGCACGCCCTGGCTGCGTCCCCTCAGGGCATCGGCCGGCTTaGTGCGTCAGCGAATCCTCAGCCCGAGATGGAGAGCAGGGACGG +
Preference number: 5 (lower is better)
Translates to: SPARPGCVPSGHRPA*CVSESSARDGEQGR
Trigger: CCGTCCCTGCTCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGGGCGTGCGGGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCTCCAGAGCTGTTCATaGGTGACCCCCGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPALQSCS*VTPGRR
Trigger: CCTGCGCCCGGGGGTCACCAATGAACAGCTCTGGAG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTTCCCTCCACTGTAGGTaGAGCACTCTCCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPASLHCR*STLPGG
Trigger: GCCCCCTGGGAGAGTGCTCAACCTACAGTGGAGGGA...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS GCA 90 bp GGGCAGTCCCTCTGTGTCCCGGGCTCTCCTGCCCCACAACAGGCATaGTCACCTGCCCTAAACAGCCGCTCTCTGCCAGGGGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GQSLCVPGSPAPQQA*SPALNSRSLPGAVL
Trigger: CAGAACCGCCCCTGGCAGAGAGCGGCTGTTTAGGGCAGGTGAGCATGCCTGTTGTGGGGCAGGAGAGCCCGGGACACAGAGGGACTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGATGCCAGTGTCTGGTaGGGCAAGAGAAGACCGACT +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPADASVW*GKRRPT
Trigger: AGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGATGCAGGTGAAGGCTaGGTCGCATTGCGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPADAGEG*VALRFA
Trigger: TGCAAACCGCAATGCGACCAAGCCTTCACCTGCATC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTACTCACAACCCCTTGTaGTACACCACTGTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPATHNPL*YTTVRL
Trigger: CAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTCACACTCACAACCCCTaGTTGTACACCACTGTCCGG +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPAHTHNP*LYTTVR
Trigger: CCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTG...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS GCA 90 bp CCAGCAGGGCGTGTCGGGCTGCGATCTTGGAGGAGCCCACGAGGTTaGCATCGCTGTCCAGGACATCAATCCCTTCCTCCAGCTCCCCGT +
Preference number: 5 (lower is better)
Translates to: PAGRVGLRSWRSPRG*HRCPGHQSLPPAPR
Trigger: ACGGGGAGCTGGAGGAAGGGATTGATGTCCTGGACAGCGATGGCAACCTCGTGGGCTCCTCCAAGATCGCAGCCCGACACGCCCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
ENST00000490056.5
ENST00000495208.5
CDS-3UTR CAA 90 bp CAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTCCAGAGCTGTTCATaGGTGACCCCCGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QPLVVHHCPAARGLGYLRLQSCS*VTPGRR
Trigger: CCTGCGCCCGGGGGTCACCAATGAACAGCTCTGGAG...CCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS GCA 90 bp AGCCCGGAGTTGGTCATGCTCTCCTGTGCACCTCTGCTTGTACGGTaGCCTCTCTCTGGAACACCCACCCTGCCTGCCCCTGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SPELVMLSCAPLLVR*PLSGTPTLPAPGSL
Trigger: GAGAGAGCCAGGGGCAGGCAGGGTGGGTGTTCCAGAGAGAGGGCACCGTACAAGCAGAGGTGCACAGGAGAGCATGACCAACTCCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS CCA 90 bp GAGCATCTCTCCTGCTTCCACCGACGCTCAGTGCAGTGGAAACCATaGGCAGTCCCTCTGTGTCCCGGGCTCTCCTGCCCCACAACAGGC +
Preference number: 5 (lower is better)
Translates to: EHLSCFHRRSVQWKP*AVPLCPGLSCPTTG
Trigger: GCCTGTTGTGGGGCAGGAGAGCCCGGGACACAGAGGGACTGCCCATGGTTTCCACTGCACTGAGCGTCGGTGGAAGCAGGAGAGATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTTATCCCTGGATGAACTaGGATGCAGGTGAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPAYPWMN*DAGEGL
Trigger: CAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATA...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGTGTCGGGCTGCGATCTaGGAGGAGCCCACGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWCRAAI*EEPTRL
Trigger: CAACCTCGTGGGCTCCTCCAAGATCGCAGCCCGACA...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS GCA 90 bp GTGCAGTGGAAACCATGGGCAGTCCCTCTGTGTCCCGGGCTCTCCTaGCCCACAACAGGCATGCTCACCTGCCCTAAACAGCCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: VQWKPWAVPLCPGLS*PTTGMLTCPKQPLS
Trigger: AGAGAGCGGCTGTTTAGGGCAGGTGAGCATGCCTGTTGTGGGGCAGGAGAGCCCGGGACACAGAGGGACTGCCCATGGTTTCCACTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS CCA 90 bp ACCATCTTCGAGCATCTCTCCTGCTTCCACCGACGCTCAGTGCAGTaGAAACCATGGGCAGTCCCTCTGTGTCCCGGGCTCTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: TIFEHLSCFHRRSVQ*KPWAVPLCPGLSCP
Trigger: GGGGCAGGAGAGCCCGGGACACAGAGGGACTGCCCATGGTTTCCACTGCACTGAGCGTCGGTGGAAGCAGGAGAGATGCTCGAAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS-3UTR CAA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGCTCCAGAGCTGTTCATaGGTGACCCCCGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQLQSCS*VTPGRR
Trigger: CCTGCGCCCGGGGGTCACCAATGAACAGCTCTGGAG...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGTCCCTCCACTGTAGGTaGAGCACTCTCCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLSLHCR*STLPGG
Trigger: GCCCCCTGGGAGAGTGCTCAACCTACAGTGGAGGGA...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCACATCGCAGGCGTGGCTaGTGTTCTCGCACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSHRRRG*CSRTAG
Trigger: GCCAGCTGTGCGAGAACACAAGCCACGCCTGCGATG...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCACTCACTGGGCCAGGCTaGAAGACCACCCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSLTGPG*KTTLGL
Trigger: CAGACCCAGGGTGGTCTTCAAGCCTGGCCCAGTGAG...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS GCA 90 bp TGCCGCCCACCCCTGGCAAGCCCCGGTTCACTTCAGCGGTCTCTCTaGCTGTTTCCTAATAAATTCCGTCTCATTGGTGCGGGAGGCGCG +
Preference number: 5 (lower is better)
Translates to: CRPPLASPGSLQRSL*LFPNKFRLIGAGGA
Trigger: CGCGCCTCCCGCACCAATGAGACGGAATTTATTAGGAAACAGGCAGAGAGACCGCTGAAGTGAACCGGGGCTTGCCAGGGGTGGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTGAAGACCGACTACAATaGGCGTCCCAAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPAEDRLQ*ASQKEY
Trigger: ATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTTC...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGTGCTTCCCCCTGGTTaGGGCCTTTCAGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSVLPPG*GLSDEG
Trigger: CCCCTCATCTGAAAGGCCCAAACCAGGGGGAAGCAC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS GCA 90 bp CACACACCATCTTCGAGCATCTCTCCTGCTTCCACCGACGCTCAGTaGAGTGGAAACCATGGGCAGTCCCTCTGTGTCCCGGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HTPSSSISPASTDAQ*SGNHGQSLCVPGSP
Trigger: AGGAGAGCCCGGGACACAGAGGGACTGCCCATGGTTTCCACTGCACTGAGCGTCGGTGGAAGCAGGAGAGATGCTCGAAGATGGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS-3UTR CAA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTATGGGGCAGGCAGCCTaGGTGGCTGGAGAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSMGQAA*VAGEAP
Trigger: CGGAGCTTCTCCAGCCACCAAGGCTGCCTGCCCCAT...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp GTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGCTATCTGGATCCTTaGCCACTGCACCGCCACAGG +
Preference number: 5 (lower is better)
Translates to: VHGSCQAPFLLGVSCLELGYLDP*PLHRHR
Trigger: CCTGTGGCGGTGCAGTGGCAAAGGATCCAGATAGCC...CAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS TCA 90 bp GGAGGAGAGTCTCCCTGTTTAAACTCTTCACACGCCCCTGGACCGTaGGGCTCAGCAGAAGGGCCCGGGTACTTGAGAGGTGGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: GGESPCLNSSHAPGP*GSAEGPGYLRGGES
Trigger: GCTTTCACCACCTCTCAAGTACCCGGGCCCTTCTGCTGAGCCTCACGGTCCAGGGGCGTGTGAAGAGTTTAAACAGGGAGACTCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464825.5
CDS CCA 90 bp GGAAATGGGAGGAGAGTCTCCCTGTTTAAACTCTTCACACGCCCCTaGACCGTGAGGCTCAGCAGAAGGGCCCGGGTACTTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GNGRRVSLFKLFTRP*TVRLSRRARVLERW
Trigger: CCACCTCTCAAGTACCCGGGCCCTTCTGCTGAGCCTCACGGTCCAGGGGCGTGTGAAGAGTTTAAACAGGGAGACTCTCCTCCCATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464825.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGGTGCAGCCGTGAGTCTACGGCCCTGCCCCTCAGCTCCCCGGCTATGAAGATCTTCTCATaGGTGTCCGGATGTAGAATA +
Preference number: 5 (lower is better)
Translates to: APCRCSRESTALPLSSPAMKIFS*VSGCRI
Trigger: TATTCTACATCCGGACACCAATGAGAAGATCTTCAT...AGCCGGGGAGCTGAGGGGCAGGGCCGTAGACTCACGGCTGCACCTGCAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272433.7
ENST00000411783.5
CDS-3UTR CAA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGATGCCAGTGTCTGGTaGGGCAAGAGAAGACCGACT +
Preference number: 5 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSDASVW*GKRRPT
Trigger: AGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp ACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGATGCCAGTGTCTGGTaGGGCAAGAGAAGACCGACT +
Preference number: 5 (lower is better)
Translates to: TTPCCTPLSGCSWPGLSPDASVW*GKRRPT
Trigger: AGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATC...CGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CAA 90 bp CACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGATGCAGGTGAAGGCTaGGTCGCATTGCGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: HNPLLYTTVRLLVAWAISDAGEG*VALRFA
Trigger: TGCAAACCGCAATGCGACCAAGCCTTCACCTGCATC...GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CAA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGACTCCACGGCCAGCTaGACATCTTGGTCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RFPLTGLSKARPGPSGIADSTAS*TSWSLH
Trigger: GTGCAGGGACCAAGATGTCAAGCTGGCCGTGGAGTC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTGAAGGTCCTGGCAGCTaGAGCGTCCACTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTEGPGS*SVHSGS
Trigger: AGAGCCAGAGTGGACGCTCAAGCTGCCAGGACCTTC...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS TCA 90 bp GGATGGACGTGCCTCATGGAGATGACATTTTCTCCAGCATGGACATaGCGATCGGGGGTAGCACCAGGATGGGCATGGGCAGGACCACTC +
Preference number: 5 (lower is better)
Translates to: GWTCLMEMTFSPAWT*RSGVAPGWAWAGPL
Trigger: GAGTGGTCCTGCCCATGCCCATCCTGGTGCTACCCCCGATCGTCATGTCCATGCTGGAGAAAATGTCATCTCCATGAGGCACGTCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS CCA 90 bp TGCAGATATTGGCACTGGGGTATGCCAGATCCTGAGCAAGCTGCTTaGAAACAGGTGCCTTGGTCGCGTGCGAGTGCCCCTCACAGCTTC +
Preference number: 5 (lower is better)
Translates to: CRYWHWGMPDPEQAA*KQVPWSRASAPHSF
Trigger: GAAGCTGTGAGGGGCACTCGCACGCGACCAAGGCACCTGTTTCCAAGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCAATATCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS-3UTR CAA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACTGTAGAATAGCCTGCTaGATTTTCTGTGCACTCCAG +
Preference number: 5 (lower is better)
Translates to: AEACVRGPHSHWARLEDHCRIAC*IFCALQ
Trigger: CTGGAGTGCACAGAAAATCAAGCAGGCTATTCTACA...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp AGGCCTAGAGACCAGCACAGCGCAGCAGTCACTGGCATATTCACATTATGGTGGGAGGAGCCCACGAGGTaGCCATCGCTGTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RPRDQHSAAVTGIFTLWWEEPTR*PSLSRT
Trigger: TGTCCTGGACAGCGATGGCAACCTCGTGGGCTCCTC...CCACCATAATGTGAATATGCCAGTGACTGCTGCGCTGTGCTGGTCTCTAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp GGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGGAGCTGGGGTCAGTGCTGAGTGGAGTTTaGACAACCCCACATAAGGCC +
Preference number: 5 (lower is better)
Translates to: GSCQAPFLLGVSCLELGSVLSGV*TTPHKA
Trigger: GGCCTTATGTGGGGTTGTCAAAACTCCACTCAGCAC...TGACCCCAGCTCCAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp GGCCCTGAATCAGTTAGAGCTCCACGAAGGGGGACCCTAGCTCCAGGGTCACTGCACATTATGGTGGGATaGGCTCAAAAAGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPESVRAPRRGTLAPGSLHIMVG*AQKGLP
Trigger: GGGCAGGCCTTTTTGAGCCAATCCCACCATAATGTG...CAGTGACCCTGGAGCTAGGGTCCCCCTTCGTGGAGCTCTAACTGATTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCACAGGAGCAGACCCCTaGGCTCACCTGAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RFPLTGLSKARPGPSGIATGADP*AHLKLH
Trigger: ATGCAGCTTCAGGTGAGCCAAGGGGTCTGCTCCTGT...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp TTCCCGAAGAGGCCAAGTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTGGCCAGCTTGACATCTaGGTCCCTGCACCCTCACAC +
Preference number: 5 (lower is better)
Translates to: FPKRPSAGPWFLPSTIPSGQLDI*VPAPSH
Trigger: GTGTGAGGGTGCAGGGACCAAGATGTCAAGCTGGCC...AGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCACTTGGCCTCTTCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCGGTGATCTTCCCGCCTaGGCCTTCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGGDLPA*AFQSVG
Trigger: CCCAACACTTTGGAAGGCCAAGGCGGGAAGATCACC...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS GCA 90 bp CCGCTGACCACACTCACAACCCCTTGTTGTACACCACTGTCCGGCTaGTCGTGGCCTGGGCTATCTCCGGCTCTAATTGGGATGTTTCAA +
Preference number: 5 (lower is better)
Translates to: PLTTLTTPCCTPLSG*SWPGLSPALIGMFQ
Trigger: TTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS CCA 90 bp CCCACAGCAATGGAGACGGCGCTGATGACAGCTCCCAGGTATCCCTaGATGAACTTGGATGCAGGTGAAGGCTTGGTCGCATTGCGGTTT +
Preference number: 5 (lower is better)
Translates to: PTAMETALMTAPRYP*MNLDAGEGLVALRF
Trigger: AAACCGCAATGCGACCAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATACCTGGGAGCTGTCATCAGCGCCGTCTCCATTGCTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000410065.5
ENST00000411783.5
ENST00000416579.5
ENST00000463277.5
ENST00000464825.5
ENST00000474528.5
CDS-3UTR CAA 90 bp CTCCATTACAGGGAGCACCAGGTTGTGCTCTGTCTACTGGAGCCTCTTCTCGGCGATGCCAGTGTCTGGTaGGGCAAGAGAAGACCGACT +
Preference number: 5 (lower is better)
Translates to: LHYREHQVVLCLLEPLLGDASVW*GKRRPT
Trigger: AGTCGGTCTTCTCTTGCCCAACCAGACACTGGCATC...GCCGAGAAGAGGCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGTAATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CAA 90 bp AGGTTTCCCCTCACAGGTCTTTCCAAAGCCAGACCAGGGCCTAGTGGCATAGCCGATGCAGGTGAAGGCTaGGTCGCATTGCGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: RFPLTGLSKARPGPSGIADAGEG*VALRFA
Trigger: TGCAAACCGCAATGCGACCAAGCCTTCACCTGCATC...GGCTATGCCACTAGGCCCTGGTCTGGCTTTGGAAAGACCTGTGAGGGGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCTATCCCTGGATGAACTaGGATGCAGGTGAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: HNPLLYTTVRLLVAWAISYPWMN*DAGEGL
Trigger: CAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATA...GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CAA 90 bp GTGCAGGTCCATGGTTCCTGCCAAGCACCATTCCTTCTCGGGGTTTCCTGCCTGCGCATCAGGACCACATaGCAGATATTGGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: VQVHGSCQAPFLLGVSCLRIRTT*QILALA
Trigger: AGCCAGTGCCAATATCTGCAATGTGGTCCTGATGCG...CAGGCAGGAAACCCCGAGAAGGAATGGTGCTTGGCAGGAACCATGGACCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTAGCAAAGACGAGGTCTaGCTGGAGGAGCCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPSKDEV*LEEPVG
Trigger: TCCCACTGGCTCCTCCAGCAAGACCTCGTCTTTGCT...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CATGGGTATGGCCCCACCATCAGGCCCAGGCATCTATGTTACCTCCTCCTCCAGTTTTGTCCTCCAGGCTaGTCTAACCCTTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: HGYGPTIRPRHLCYLLLQFCPPG*SNPSPP
Trigger: AGGGGGAGAAGGGTTAGACAAGCCTGGAGGACAAAA...CTGGAGGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATACCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS GCA 90 bp CATCAATCCCTTCCTCCAGCTCCCCGTACCGCATCAGGACCACATTaGAGATATTGGCACTGGGGTATGCCAGATCCTGAGCAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: HQSLPPAPRTASGPH*RYWHWGMPDPEQAA
Trigger: AGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCAATATCTGCAATGTGGTCCTGATGCGGTACGGGGAGCTGGAGGAAGGGATTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS CCA 90 bp TACAGCAGGGAACGGCACAAACCTCTGGATGAGAAGGCGGGTGGCTaGGGTGAACTTGTTGGCTTTCTGAACCAGGACATTAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: YSRERHKPLDEKAGG*GELVGFLNQDIKAH
Trigger: GTGGGCCTTAATGTCCTGGTTCAGAAAGCCAACAAGTTCACCCCAGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTTCCCTGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272433.7
ENST00000410065.5
ENST00000411783.5
ENST00000416579.5
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
CDS CCA 90 bp TGGAAACAGGTGCCTTGGTCGCGTGCGAGTGCCCCTCACAGCTTCTaGGGCCTGTCTACTAATCAGACATTTCCCTCAAATCCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: WKQVPWSRASAPHSF*GLSTNQTFPSNPGV
Trigger: GACTCCTGGATTTGAGGGAAATGTCTGATTAGTAGACAGGCCCCAGAAGCTGTGAGGGGCACTCGCACGCGACCAAGGCACCTGTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490056.5
CDS CCA 90 bp CTTCCTCCAGCTCCCCGTACCGCATCAGGACCACATTGCAGATATTaGCACTGGGGTATGCCAGATCCTGAGCAAGCTGCTTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: LPPAPRTASGPHCRY*HWGMPDPEQAAWKQ
Trigger: CTGTTTCCAAGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCAATATCTGCAATGTGGTCCTGATGCGGTACGGGGAGCTGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS-3UTR CAA 90 bp GCTGAGGCTTGCGTGCGGGGGCCTCACTCTCACTGGGCCAGGCTTGAAGACCACATGAAGATCTTCTCATaGGTGTCCGGATGTAGAATA +
Preference number: 5 (lower is better)
Translates to: AEACVRGPHSHWARLEDHMKIFS*VSGCRI
Trigger: TATTCTACATCCGGACACCAATGAGAAGATCTTCAT...GTGGTCTTCAAGCCTGGCCCAGTGAGAGTGAGGCCCCCGCACGCAAGCCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp AGCCTGGGGCCTGGAAGGAGGATCTTCCCGAAGAGGCCAAGTGCAGGTCCATGGGAAGACCGACTACAATaGGCGTCCCAAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: SLGPGRRIFPKRPSAGPWEDRLQ*ASQKEY
Trigger: ATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTTC...CCATGGACCTGCACTTGGCCTCTTCGGGAAGATCCTCCTTCCAGGCCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTACTCACAACCCCTTGTaGTACACCACTGTCCGGCTG +
Preference number: 5 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPTHNPL*YTTVRL
Trigger: CAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGT...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTCACACTCACAACCCCTaGTTGTACACCACTGTCCGG +
Preference number: 5 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFHTHNP*LYTTVR
Trigger: CCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTG...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS CCA 90 bp ACCACACTCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCTCTAATTGGGATGTTTCAATCTCTG +
Preference number: 5 (lower is better)
Translates to: TTLTTPCCTPLSGCS*PGLSPALIGMFQSL
Trigger: CAGAGATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272433.7
ENST00000474528.5
ENST00000490056.5
CDS CCA 90 bp ACTCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAATTGGGATGTTTCAATCCACTCTGGA +
Preference number: 5 (lower is better)
Translates to: THNPLLYTTVRLLVA*AISGSNWDVSIHSG
Trigger: TCCAGAGTGGATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482289.5
CDS CCA 90 bp ACCACACTCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCTCTAATTGGGATGTTTCAATCCACT +
Preference number: 5 (lower is better)
Translates to: TTLTTPCCTPLSGCS*PGLSPALIGMFQST
Trigger: AGTGGATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482289.5
CDS-3UTR CAA 90 bp ACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGAAGACCGACTACAATaGGCGTCCCAAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: TTPCCTPLSGCSWPGLSPEDRLQ*ASQKEY
Trigger: ATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTTC...CGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CAA 90 bp TCCACCAGGACAATGATCCCCTTCACTCAGGCCTTTCCATTCAAGGCCACTCAGGATGCAGGTGAAGGCTaGGTCGCATTGCGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: STRTMIPFTQAFPFKATQDAGEG*VALRFA
Trigger: TGCAAACCGCAATGCGACCAAGCCTTCACCTGCATC...CTGAGTGGCCTTGAATGGAAAGGCCTGAGTGAAGGGGATCATTGTCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CAA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTACCACATTGCAGATATaGGCACTGGCTACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPTTLQI*ALATAG
Trigger: CCCTGCTGTAGCCAGTGCCAATATCTGCAATGTGGT...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAAGGCTCTGCTTCCCTTaGTACAGCTTGCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQRLCFP*YSLLFL
Trigger: AAGGAAGAGCAAGCTGTACAAAGGGAAGCAGAGCCT...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS CCA 90 bp ACTCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAATTGGGATGTTTCAATTTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: THNPLLYTTVRLLVA*AISGSNWDVSISPA
Trigger: TGCTGGAGAAATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411783.5
ENST00000461352.5
ENST00000495208.5
CDS CCA 90 bp ACCACACTCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCTCTAATTGGGATGTTTCAATTTCTC +
Preference number: 5 (lower is better)
Translates to: TTLTTPCCTPLSGCS*PGLSPALIGMFQFL
Trigger: GAGAAATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411783.5
ENST00000461352.5
ENST00000495208.5
CDS-3UTR CAA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTCTCCAGAGCTGTTCATaGGTGACCCCCGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: TTGVPHCAQLCECCLVFILQSCS*VTPGRR
Trigger: CCTGCGCCCGGGGGTCACCAATGAACAGCTCTGGAG...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CAA 90 bp ACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGCTATGAAGATCTTCTCATaGGTGTCCGGATGTAGAATA +
Preference number: 5 (lower is better)
Translates to: TPCCTPLSGCSWPGLSPAMKIFS*VSGCRI
Trigger: TATTCTACATCCGGACACCAATGAGAAGATCTTCAT...AGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS-3UTR CAA 90 bp AAGATGCCACCCTGCAGCGGCCTCTTCCTACACATGAATGTTCACCTCTGGCCTTATCCCTGGATGAACTaGGATGCAGGTGAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: KMPPCSGLFLHMNVHLWPYPWMN*DAGEGL
Trigger: CAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATA...AGGCCAGAGGTGAACATTCATGTGTAGGAAGAGGCCGCTGCAGGGTGGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTTTCCCTTTGTACAGCTaGCTCTTCCTTCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFFPLYS*LFLPGL
Trigger: CAGACCAGGAAGGAAGAGCAAGCTGTACAAAGGGAA...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS TCA 90 bp ACTTGGATGCAGGTGAAGGCTTGGTCGCATTGCGGTTTGCATAGTTaGCACAGGCATTGTGGCTCTGGTTCAGCCACAGAAGACAGTGGA +
Preference number: 5 (lower is better)
Translates to: TWMQVKAWSHCGLHS*HRHCGSGSATEDSG
Trigger: TCCACTGTCTTCTGTGGCTGAACCAGAGCCACAATGCCTGTGTCAACTATGCAAACCGCAATGCGACCAAGCCTTCACCTGCATCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442582.1
CDS CCA 90 bp ACTCACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAATTGGGATGTTTCAATCTCTGACATT +
Preference number: 5 (lower is better)
Translates to: THNPLLYTTVRLLVA*AISGSNWDVSISDI
Trigger: AATGTCAGAGATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272433.7
ENST00000474528.5
ENST00000490056.5
CDS-3UTR CAA 90 bp TTGTCTGACTCCCAAATGAAGTCTCCTGCTGGGCTGCAGGACAAGCTGGGTGGCGAAGACCGACTACAATaGGCGTCCCAAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: LSDSQMKSPAGLQDKLGGEDRLQ*ASQKEY
Trigger: ATATTCCTTTTGGGACGCCAATTGTAGTCGGTCTTC...GCCACCCAGCTTGTCCTGCAGCCCAGCAGGAGACTTCATTTGGGAGTCAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CAA 90 bp CTCAAAGTACTGTGGAGACTCAGAGTGAGCCTAACGCCCCTGGCTTCGGGCACTCCACTTCACAGCTATTaGGAGATGACTTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: LKVLWRLRVSLTPLASGTPLHSY*EMTWSM
Trigger: CATAGACCAAGTCATCTCCAAATAGCTGTGAAGTGG...AGTGCCCGAAGCCAGGGGCGTTAGGCTCACTCTGAGTCTCCACAGTACTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CAA 90 bp CACACTGCTGTCTGGGAATGGAAGAAGGGCATCCCCAAGCCTGAGGGCATGTTTAGAACTGTAAAGTGTTaGGCAAAGGTCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: HTAVWEWKKGIPKPEGMFRTVKC*AKVNCS
Trigger: GGAGCAGTTGACCTTTGCCAAACACTTTACAGTTCT...AAACATGCCCTCAGGCTTGGGGATGCCCTTCTTCCATTCCCAGACAGCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS TCA 90 bp CTAATTGGGATGTTTCAATCCACTCTGGAGACAGCCCCTCCTCTTTaGATCGCCCAAGTCCTCAGCTTCCATGAAGTTACTCCATCTGGG +
Preference number: 5 (lower is better)
Translates to: LIGMFQSTLETAPPL*IAQVLSFHEVTPSG
Trigger: CCCAGATGGAGTAACTTCATGGAAGCTGAGGACTTGGGCGATTCAAAGAGGAGGGGCTGTCTCCAGAGTGGATTGAAACATCCCAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482289.5
CDS-3UTR CAA 90 bp ACTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTACAGGGAGCACCAGGTaGTGCTCTGTCTACTGGAGC +
Preference number: 5 (lower is better)
Translates to: TTGVPHCAQLCECCLVFITGSTR*CSVYWS
Trigger: GCTCCAGTAGACAGAGCACAACCTGGTGCTCCCTGT...AATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS-3UTR CAA 90 bp AGCAGAGTGGGGCATGGGTGCTGGGTGAAGGTTTCCCCTCACAGGTCTTTCCAAGTGTTAGAACTCCTCTaGCCTATGTTAAAATGTGAA +
Preference number: 5 (lower is better)
Translates to: SRVGHGCWVKVSPHRSFQVLELL*PMLKCE
Trigger: TTCACATTTTAACATAGGCAAGAGGAGTTCTAACAC...TTGGAAAGACCTGTGAGGGGAAACCTTCACCCAGCACCCATGCCCCACTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272433.7
CDS-3UTR CAA 90 bp CTACAGGTGTGCCCCACTGTGCTCAGCTATGTGAATGTTGTTTGGTTTTCATTTTATCCCTGGATGAACTaGGATGCAGGTGAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LQVCPTVLSYVNVVWFSFYPWMN*DAGEGL
Trigger: CAAGCCTTCACCTGCATCCAAGTTCATCCAGGGATA...AAATGAAAACCAAACAACATTCACATAGCTGAGCACAGTGGGGCACACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS CCA 90 bp TCTTTTACAAGGGCCTTAATTCCATTCATGAGGGAGGGACCCTCATaGCCTAATTGCCTCTTAAAGATCCCACCTCTTAATACTATCACA +
Preference number: 5 (lower is better)
Translates to: SFTRALIPFMREGPS*PNCLLKIPPLNTIT
Trigger: TGTGATAGTATTAAGAGGTGGGATCTTTAAGAGGCAATTAGGCCATGAGGGTCCCTCCCTCATGAATGGAATTAAGGCCCTTGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472259.5
CDS-3UTR CAA 90 bp AGGAATATAACCTGCTTGATTTTCTGTGCACTCCAGAGCTGTTCATTGGTGACCAGGAATATAACCTGCTaGATTTTCTGTGCACTCCAG +
Preference number: 5 (lower is better)
Translates to: RNITCLIFCALQSCSLVTRNITC*IFCALQ
Trigger: CTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT...GGTCACCAATGAACAGCTCTGGAGTGCACAGAAAATCAAGCAGGTTATATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450185.5
CDS TCA 90 bp TCCCACCTCTTAATACTATCACATTTGCCATTAAGTTTCAACACCTaGATTTTGTATGGGACACATTTCAGCCATAGCATCTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: SHLLILSHLPLSFNT*ILYGTHFSHSISPW
Trigger: CCAGGGTGAGATGCTATGGCTGAAATGTGTCCCATACAAAATTCAGGTGTTGAAACTTAATGGCAAATGTGATAGTATTAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472259.5
CDS TCA 90 bp GGCAATTTTCAACTCAACGCTGGATTTAAGTCATCAGGCTTTTTATaGAAAGAGGTTTGCCAATCAGCATCAAGAGATGTGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GNFQLNAGFKSSGFL*KEVCQSASRDVVRN
Trigger: ATTTCTTACCACATCTCTTGATGCTGATTGGCAAACCTCTTTTCATAAAAAGCCTGATGACTTAAATCCAGCGTTGAGTTGAAAATTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479293.5
CDS GCA 72 bp GGGCCAGGGCTGGGGAGTGACCGCGGGGCGCGACGCTaGCCGGCGGCACCGCCAGCAGCTCGAAAGGAACGT +
Preference number: 6 (lower is better)
Translates to: GPGLGSDRGARR*PAAPPAARKER
Trigger: ACGTTCCTTTCGAGCTGCTGGCGGTGCCGCCGGGCAGCGTCGCGCCCCGCGGTCACTCCCCAGCCCTGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472259.5
ENST00000479293.5
ENST00000497144.5
CDS CAA 90 bp TTCCCCCGCACGCCCTGGCTGCGTCCCCTCAGGGCATCGGCCGGCTaGCTGCGTCAGCGAATCCTCAGCCCGAGATGGAGAGCAGGGACG +
Preference number: 6 (lower is better)
Translates to: FPRTPWLRPLRASAG*LRQRILSPRWRAGT
Trigger: CGTCCCTGCTCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGGGCGTGCGGGGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS GCA 72 bp CACGAGGCTTTGCACAGGGAGGAGCAGCCGGGGGCGTaGCTGCAGGAGAGCCGTCCTACAGCAGGGAACGGC +
Preference number: 6 (lower is better)
Translates to: HEALHREEQPGA*LQESRPTAGNG
Trigger: GCCGTTCCCTGCTGTAGGACGGCTCTCCTGCAGGCACGCCCCCGGCTGCTCCTCCCTGTGCAAAGCCTCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS GCA 72 bp CGCCCTGGCTGCGTCCCCTCAGGGCATCGGCCGGCTTaGTGCGTCAGCGAATCCTCAGCCCGAGATGGAGAG +
Preference number: 6 (lower is better)
Translates to: RPGCVPSGHRPA*CVSESSARDGE
Trigger: CTCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS GCA 72 bp AGAGGAGGTCCCGGAGGGAAAGGACCCCTGTCGCCGTaGCCCGAAGAGCCTGAGCGGGTGTGCCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: RGGPGGKGPLSP*PEEPERVCPEP
Trigger: TGGCTCTGGGCACACCCGCTCAGGCTCTTCGGGGCACGGCGACAGGGGTCCTTTCCCTCCGGGACCTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS CAA 90 bp GCATCCCGGCCACGCCAACTTCCCATCCAGGGCCAGACTAGAACTTaGCGTCCCGGGCGGGCAGCTGCACAACCCGGAGCGACCCTGAGC +
Preference number: 6 (lower is better)
Translates to: ASRPRQLPIQGQTRT*RPGRAAAQPGATLS
Trigger: GCTCAGGGTCGCTCCGGGTTGTGCAGCTGCCCGCCCGGGACGCAAAGTTCTAGTCTGGCCCTGGATGGGAAGTTGGCGTGGCCGGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479293.5
ENST00000497144.5
CDS GCA 72 bp CCTGGCTGCGTCCCCTCAGGGCATCGGCCGGCTTGCTaGGTCAGCGAATCCTCAGCCCGAGATGGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: PGCVPSGHRPAC*VSESSARDGEQ
Trigger: CTGCTCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS CAA 72 bp ACGCCCTGGCTGCGTCCCCTCAGGGCATCGGCCGGCTaGCTGCGTCAGCGAATCCTCAGCCCGAGATGGAGA +
Preference number: 6 (lower is better)
Translates to: TPWLRPLRASAG*LRQRILSPRWR
Trigger: TCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS GCA 72 bp AGGCTTTGCACAGGGAGGAGCAGCCGGGGGCGTGCCTaGAGGAGAGCCGTCCTACAGCAGGGAACGGCACAA +
Preference number: 6 (lower is better)
Translates to: RLCTGRSSRGRA*RRAVLQQGTAQ
Trigger: TTGTGCCGTTCCCTGCTGTAGGACGGCTCTCCTGCAGGCACGCCCCCGGCTGCTCCTCCCTGTGCAAAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS CAA 72 bp CCACGCCAACTTCCCATCCAGGGCCAGACTAGAACTTaGCGTCCCGGGCGGGCAGCTGCACAACCCGGAGCG +
Preference number: 6 (lower is better)
Translates to: PRQLPIQGQTRT*RPGRAAAQPGA
Trigger: CGCTCCGGGTTGTGCAGCTGCCCGCCCGGGACGCAAAGTTCTAGTCTGGCCCTGGATGGGAAGTTGGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479293.5
ENST00000497144.5
CDS GCA 72 bp AGGCTTTGCACAGGGAGGAGCAGCCGGGGGCGTGCCTaGAGGAGAGCCGTCTTCTCCAGCATGGACATGACG +
Preference number: 6 (lower is better)
Translates to: RLCTGRSSRGRA*RRAVFSSMDMT
Trigger: CGTCATGTCCATGCTGGAGAAGACGGCTCTCCTGCAGGCACGCCCCCGGCTGCTCCTCCCTGTGCAAAGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272433.7
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
CDS GCA 72 bp CTCTGTGTCCCGGGCTCTCCTGCCCCACAACAGGCATaGTCACCTGCCCTAAACAGCCGCTCTCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LCVPGSPAPQQA*SPALNSRSLPG
Trigger: CCCTGGCAGAGAGCGGCTGTTTAGGGCAGGTGAGCATGCCTGTTGTGGGGCAGGAGAGCCCGGGACACAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS GCA 72 bp CACGCCAACTTCCCATCCAGGGCCAGACTAGAACTTTaGGTCCCGGGCGGGCAGCTGCACAACCCGGAGCGA +
Preference number: 6 (lower is better)
Translates to: HANFPSRARLEL*VPGGQLHNPER
Trigger: TCGCTCCGGGTTGTGCAGCTGCCCGCCCGGGACGCAAAGTTCTAGTCTGGCCCTGGATGGGAAGTTGGCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479293.5
ENST00000497144.5
CDS CCA 72 bp TCCTGCTTCCACCGACGCTCAGTGCAGTGGAAACCATaGGCAGTCCCTCTGTGTCCCGGGCTCTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SCFHRRSVQWKP*AVPLCPGLSCP
Trigger: GGGGCAGGAGAGCCCGGGACACAGAGGGACTGCCCATGGTTTCCACTGCACTGAGCGTCGGTGGAAGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS CAA 72 bp CGTCCCCAGGCCGCTGACCACACTCACAACCCCTTGTaGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: RPQAADHTHNPL*YTTVRLLVAWA
Trigger: AGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGTCAGCGGCCTGGGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS CAA 72 bp CTCCGTCCCCAGGCCGCTGACCACACTCACAACCCCTaGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LRPQAADHTHNP*LYTTVRLLVAW
Trigger: CCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGTCAGCGGCCTGGGGACGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS CAA 72 bp CCACCCGGTGGCCGCCCTCCTGTTCTGAGCCCGGAGTaGGTCATGCTCTCCTGTGCACCTCTGCTTGTACGG +
Preference number: 6 (lower is better)
Translates to: PPGGRPPVLSPE*VMLSCAPLLVR
Trigger: CCGTACAAGCAGAGGTGCACAGGAGAGCATGACCAACTCCGGGCTCAGAACAGGAGGGCGGCCACCGGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS CAA 90 bp TCCAGCAGGGCGTGTCGGGCTGCGATCTTGGAGGAGCCCACGAGGTaGCCATCGCTGTCCAGGACATCAATCCCTTCCTCCAGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: SSRACRAAILEEPTR*PSLSRTSIPSSSSP
Trigger: CGGGGAGCTGGAGGAAGGGATTGATGTCCTGGACAGCGATGGCAACCTCGTGGGCTCCTCCAAGATCGCAGCCCGACACGCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
ENST00000490056.5
ENST00000495208.5
CDS CAA 90 bp ACAGTGCTCCGTCCCCAGGCCGCTGACCACACTCACAACCCCTTGTaGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCCGGC +
Preference number: 6 (lower is better)
Translates to: TVLRPQAADHTHNPL*YTTVRLLVAWAISG
Trigger: GCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGTCAGCGGCCTGGGGACGGAGCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS TCA 72 bp GACATTAAGGCCCACCCGGTGGCCGCCCTCCTGTTCTaGGCCCGGAGTTGGTCATGCTCTCCTGTGCACCTC +
Preference number: 6 (lower is better)
Translates to: DIKAHPVAALLF*ARSWSCSPVHL
Trigger: GAGGTGCACAGGAGAGCATGACCAACTCCGGGCTCAGAACAGGAGGGCGGCCACCGGGTGGGCCTTAATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS CAA 90 bp TGCACAGTGCTCCGTCCCCAGGCCGCTGACCACACTCACAACCCCTaGTTGTACACCACTGTCCGGCTGCTCGTGGCCTGGGCTATCTCC +
Preference number: 6 (lower is better)
Translates to: CTVLRPQAADHTHNP*LYTTVRLLVAWAIS
Trigger: GGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGTGGTCAGCGGCCTGGGGACGGAGCACTGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS CAA 90 bp CACTTCAGCGGTCTCTCTGCCTGTTTCCTAATAAATTCCGTCTCATaGGTGCGGGAGGCGCGGGAGCCCGAGGGTCTGCGGCGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: HFSGLSACFLINSVS*VREAREPEGLRRGS
Trigger: GCTCCCGCGCCGCAGACCCTCGGGCTCCCGCGCCTCCCGCACCAATGAGACGGAATTTATTAGGAAACAGGCAGAGAGACCGCTGAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS CAA 72 bp GCGTGTCGGGCTGCGATCTTGGAGGAGCCCACGAGGTaGCCATCGCTGTCCAGGACATCAATCCCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ACRAAILEEPTR*PSLSRTSIPSS
Trigger: GGAGGAAGGGATTGATGTCCTGGACAGCGATGGCAACCTCGTGGGCTCCTCCAAGATCGCAGCCCGACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
ENST00000490056.5
ENST00000495208.5
CDS GCA 72 bp CGTGTCGGGCTGCGATCTTGGAGGAGCCCACGAGGTTaGCATCGCTGTCCAGGACATCAATCCCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RVGLRSWRSPRG*HRCPGHQSLPP
Trigger: TGGAGGAAGGGATTGATGTCCTGGACAGCGATGGCAACCTCGTGGGCTCCTCCAAGATCGCAGCCCGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
ENST00000490056.5
ENST00000495208.5
CDS GCA 72 bp AAACCATGGGCAGTCCCTCTGTGTCCCGGGCTCTCCTaGCCCACAACAGGCATGCTCACCTGCCCTAAACAG +
Preference number: 6 (lower is better)
Translates to: KPWAVPLCPGLS*PTTGMLTCPKQ
Trigger: CTGTTTAGGGCAGGTGAGCATGCCTGTTGTGGGGCAGGAGAGCCCGGGACACAGAGGGACTGCCCATGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS GCA 72 bp TTGGTCATGCTCTCCTGTGCACCTCTGCTTGTACGGTaGCCTCTCTCTGGAACACCCACCCTGCCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: LVMLSCAPLLVR*PLSGTPTLPAP
Trigger: AGGGGCAGGCAGGGTGGGTGTTCCAGAGAGAGGGCACCGTACAAGCAGAGGTGCACAGGAGAGCATGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS CCA 72 bp CCAGCAGGGCCTACAGCAGGGAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCTGGGGTGAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: PAGPTAGNGTNL*MRRRVAGVNLL
Trigger: CAACAAGTTCACCCCAGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTTCCCTGCTGTAGGCCCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411783.5
CDS CCA 72 bp TGGCACTGGGGTATGCCAGATCCTGAGCAAGCTGCTTaGAAACAGGTGCCTTGGTCGCGTGCGAGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: WHWGMPDPEQAA*KQVPWSRASAP
Trigger: AGGGGCACTCGCACGCGACCAAGGCACCTGTTTCCAAGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS CAA 72 bp GGTCTCTCTGCCTGTTTCCTAATAAATTCCGTCTCATaGGTGCGGGAGGCGCGGGAGCCCGAGGGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: GLSACFLINSVS*VREAREPEGLR
Trigger: CCGCAGACCCTCGGGCTCCCGCGCCTCCCGCACCAATGAGACGGAATTTATTAGGAAACAGGCAGAGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS GCA 72 bp TCTTCGAGCATCTCTCCTGCTTCCACCGACGCTCAGTaGAGTGGAAACCATGGGCAGTCCCTCTGTGTCCCG +
Preference number: 6 (lower is better)
Translates to: SSSISPASTDAQ*SGNHGQSLCVP
Trigger: CGGGACACAGAGGGACTGCCCATGGTTTCCACTGCACTGAGCGTCGGTGGAAGCAGGAGAGATGCTCGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS CCA 72 bp GAGAGCCGTCCTACAGCAGGGAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCTGGGGTGAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: ESRPTAGNGTNL*MRRRVAGVNLL
Trigger: CAACAAGTTCACCCCAGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTTCCCTGCTGTAGGACGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410065.5
CDS CCA 72 bp CGGCTGCTCGTGGCCTGGGCTATCTCCGGCTCTAATTaGGATGTTTCAATCCACTCTGGAGACAGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: RLLVAWAISGSN*DVSIHSGDSPS
Trigger: GGAGGGGCTGTCTCCAGAGTGGATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482289.5
CDS CAA 72 bp CCTTCCTCCAGCTCCCCGTACCGCATCAGGACCACATaGCAGATATTGGCACTGGCTACAGCAGGGAACGGC +
Preference number: 6 (lower is better)
Translates to: PSSSSPYRIRTT*QILALATAGNG
Trigger: GCCGTTCCCTGCTGTAGCCAGTGCCAATATCTGCAATGTGGTCCTGATGCGGTACGGGGAGCTGGAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272433.7
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
CDS TCA 72 bp TCTCCCTGTTTAAACTCTTCACACGCCCCTGGACCGTaGGGCTCAGCAGAAGGGCCCGGGTACTTGAGAGGT +
Preference number: 6 (lower is better)
Translates to: SPCLNSSHAPGP*GSAEGPGYLRG
Trigger: ACCTCTCAAGTACCCGGGCCCTTCTGCTGAGCCTCACGGTCCAGGGGCGTGTGAAGAGTTTAAACAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464825.5
CDS GCA 72 bp ACACTCACAACCCCTTGTTGTACACCACTGTCCGGCTaGTCGTGGCCTGGGCTATCTCCGGCTCTAATTGGG +
Preference number: 6 (lower is better)
Translates to: TLTTPCCTPLSG*SWPGLSPALIG
Trigger: CCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000272433.7
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS GCA 72 bp GTATGCCAGATCCTGAGCAAGCTGCTTGGAAACAGGTaGCTTGGTCGCGTGCGAGTGCCCCTCACAGCTTCT +
Preference number: 6 (lower is better)
Translates to: VCQILSKLLGNR*LGRVRVPLTAS
Trigger: AGAAGCTGTGAGGGGCACTCGCACGCGACCAAGGCACCTGTTTCCAAGCAGCTTGCTCAGGATCTGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS CCA 72 bp TTGGCACTGGCTACAGCAGGGAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCTGGGGTGAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: LALATAGNGTNL*MRRRVAGVNLL
Trigger: CAACAAGTTCACCCCAGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTTCCCTGCTGTAGCCAGTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272433.7
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
CDS CCA 72 bp CTGCAGGCATCTACAGCAGGGAACGGCACAAACCTCTaGATGAGAAGGCGGGTGGCTGGGGTGAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: LQASTAGNGTNL*MRRRVAGVNLL
Trigger: CAACAAGTTCACCCCAGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTTCCCTGCTGTAGATGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS CCA 72 bp GCCCTAAACAGCCGCTCTCTGCCAGGGGCGGTTCTGTaGGGCATTTGGCCATGTTTGAGGGCATTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: ALNSRSLPGAVL*GIWPCLRAFSV
Trigger: CACTGAAAATGCCCTCAAACATGGCCAAATGCCCCACAGAACCGCCCCTGGCAGAGAGCGGCTGTTTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416579.5
CDS TCA 72 bp TGCCTCATGGAGATGACATTTTCTCCAGCATGGACATaGCGATCGGGGGTAGCACCAGGATGGGCATGGGCA +
Preference number: 6 (lower is better)
Translates to: CLMEMTFSPAWT*RSGVAPGWAWA
Trigger: TGCCCATGCCCATCCTGGTGCTACCCCCGATCGTCATGTCCATGCTGGAGAAAATGTCATCTCCATGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS GCA 72 bp CCCCTGGCAAGCCCCGGTTCACTTCAGCGGTCTCTCTaGCTGTTTCCTAATAAATTCCGTCTCATTGGTGCG +
Preference number: 6 (lower is better)
Translates to: PLASPGSLQRSL*LFPNKFRLIGA
Trigger: CGCACCAATGAGACGGAATTTATTAGGAAACAGGCAGAGAGACCGCTGAAGTGAACCGGGGCTTGCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472259.5
ENST00000479293.5
CDS CCA 72 bp CGGCTGCTCGTGGCCTGGGCTATCTCCGGCTCTAATTaGGATGTTTCAATCTCTGACATTTGCGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RLLVAWAISGSN*DVSISDICGKR
Trigger: CCTCTTCCCGCAAATGTCAGAGATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272433.7
ENST00000410065.5
ENST00000474528.5
ENST00000490056.5
CDS CCA 72 bp CCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAATTGGGATGTTTCAATC +
Preference number: 6 (lower is better)
Translates to: PLLYTTVRLLVA*AISGSNWDVSI
Trigger: GATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272433.7
ENST00000410065.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
CDS CCA 72 bp ACAACCCCTTGTTGTACACCACTGTCCGGCTGCTCGTaGCCTGGGCTATCTCCGGCTCTAATTGGGATGTTT +
Preference number: 6 (lower is better)
Translates to: TTPCCTPLSGCS*PGLSPALIGMF
Trigger: AAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000272433.7
ENST00000410065.5
ENST00000411783.5
ENST00000461352.5
ENST00000474528.5
ENST00000482289.5
ENST00000490056.5
ENST00000495208.5
CDS CCA 72 bp GTGCCTTGGTCGCGTGCGAGTGCCCCTCACAGCTTCTaGGGCCTGTCTACTAATCAGACATTTCCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: VPWSRASAPHSF*GLSTNQTFPSN
Trigger: ATTTGAGGGAAATGTCTGATTAGTAGACAGGCCCCAGAAGCTGTGAGGGGCACTCGCACGCGACCAAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS TCA 72 bp TGTGGCAGGAACTGTGCTAGATGCTGGGCAGGGCAGTaGACAAAAGGATGGACGTGCCTCATGGAGATGACA +
Preference number: 6 (lower is better)
Translates to: CGRNCARCWAGQ*TKGWTCLMEMT
Trigger: TGTCATCTCCATGAGGCACGTCCATCCTTTTGTTCACTGCCCTGCCCAGCATCTAGCACAGTTCCTGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482542.5
CDS TCA 72 bp ACATTGCAGATATTGGCACTGGGGTATGCCAGATCCTaGGCAAGCTGCTTGGAAACAGGTGCCTTGGTCGCG +
Preference number: 6 (lower is better)
Translates to: TLQILALGYARS*ASCLETGALVA
Trigger: CGCGACCAAGGCACCTGTTTCCAAGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCAATATCTGCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS CCA 72 bp GAACGGCACAAACCTCTGGATGAGAAGGCGGGTGGCTaGGGTGAACTTGTTGGCTTTCTGAACCAGGACATT +
Preference number: 6 (lower is better)
Translates to: ERHKPLDEKAGG*GELVGFLNQDI
Trigger: AATGTCCTGGTTCAGAAAGCCAACAAGTTCACCCCAGCCACCCGCCTTCTCATCCAGAGGTTTGTGCCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272433.7
ENST00000410065.5
ENST00000411783.5
ENST00000416579.5
ENST00000463277.5
ENST00000474528.5
ENST00000482289.5
ENST00000482542.5
CDS CCA 72 bp CCCTTGTTGTACACCACTGTCCGGCTGCTCGTGGCCTaGGCTATCTCCGGCTCTAATTGGGATGTTTCAATT +
Preference number: 6 (lower is better)
Translates to: PLLYTTVRLLVA*AISGSNWDVSI
Trigger: AATTGAAACATCCCAATTAGAGCCGGAGATAGCCCAGGCCACGAGCAGCCGGACAGTGGTGTACAACAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411783.5
ENST00000461352.5
ENST00000495208.5
CDS CCA 72 bp CTGGTTCAGCCACAGAAGACAGTGGATGCCAGTGTCTaGTTGGGCAAGAGAAGACCGAAATTGGCGTCCCAA +
Preference number: 6 (lower is better)
Translates to: LVQPQKTVDASV*LGKRRPKLASQ
Trigger: TTGGGACGCCAATTTCGGTCTTCTCTTGCCCAACCAGACACTGGCATCCACTGTCTTCTGTGGCTGAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442582.1
CDS TCA 72 bp CAGGTGAAGGCTTGGTCGCATTGCGGTTTGCATAGTTaGCACAGGCATTGTGGCTCTGGTTCAGCCACAGAA +
Preference number: 6 (lower is better)
Translates to: QVKAWSHCGLHS*HRHCGSGSATE
Trigger: TTCTGTGGCTGAACCAGAGCCACAATGCCTGTGTCAACTATGCAAACCGCAATGCGACCAAGCCTTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442582.1
CDS GCA 72 bp CATCAGGACCACATTGCAGATATTGGCACTGGGGTATaGCAGATCCTGAGCAAGCTGCTTGGAAACAGGTGC +
Preference number: 6 (lower is better)
Translates to: HQDHIADIGTGV*QILSKLLGNRC
Trigger: GCACCTGTTTCCAAGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCAATATCTGCAATGTGGTCCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS CCA 72 bp TTCAGCCACAGAAGACAGTGGATGCCAGTGTCTGGTTaGGCAAGAGAAGACCGAAATTGGCGTCCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: FSHRRQWMPVSG*AREDRNWRPKR
Trigger: CCTTTTGGGACGCCAATTTCGGTCTTCTCTTGCCCAACCAGACACTGGCATCCACTGTCTTCTGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442582.1
CDS CCA 72 bp CGTACCGCATCAGGACCACATTGCAGATATTGGCACTaGGGTATGCCAGATCCTGAGCAAGCTGCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: RTASGPHCRYWH*GMPDPEQAAWK
Trigger: TTTCCAAGCAGCTTGCTCAGGATCTGGCATACCCCAGTGCCAATATCTGCAATGTGGTCCTGATGCGGTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490056.5
ENST00000495208.5
CDS CAA 72 bp GTTCAGCCACAGAAGACAGTGGATGCCAGTGTCTGGTaGGGCAAGAGAAGACCGAAATTGGCGTCCCAAAAG +
Preference number: 6 (lower is better)
Translates to: VQPQKTVDASVW*GKRRPKLASQK
Trigger: CTTTTGGGACGCCAATTTCGGTCTTCTCTTGCCCAACCAGACACTGGCATCCACTGTCTTCTGTGGCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442582.1
CDS TCA 72 bp GAAGTCCAAGATCAAGAACCAGCATTTGGTATCTGGTaGGGGCATCTTTCTGAGGGAAGGAAGGCTGTGTAC +
Preference number: 6 (lower is better)
Translates to: EVQDQEPAFGIW*GHLSEGRKAVY
Trigger: GTACACAGCCTTCCTTCCCTCAGAAAGATGCCCTCACCAGATACCAAATGCTGGTTCTTGATCTTGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472259.5
CDS TCA 72 bp ATGTTTCAATCCACTCTGGAGACAGCCCCTCCTCTTTaGATCGCCCAAGTCCTCAGCTTCCATGAAGTTACT +
Preference number: 6 (lower is better)
Translates to: MFQSTLETAPPL*IAQVLSFHEVT
Trigger: AGTAACTTCATGGAAGCTGAGGACTTGGGCGATTCAAAGAGGAGGGGCTGTCTCCAGAGTGGATTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482289.5
CDS CAA 72 bp GAGCCCCCAGCCACACCTCATTGTGGCATTTCTTTATaGGTCTTTCAGCTCATCTCAGTATCATGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: EPPATPHCGISL*VFQLISVSCSP
Trigger: AGGAGAGCATGATACTGAGATGAGCTGAAAGACCAATAAAGAAATGCCACAATGAGGTGTGGCTGGGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484123.1
CDS CAA 90 bp CATTCTTCTCCTCTGTCAAGCAGGGCAACCTCCTCCTCTGAAGCTTaGTTCAAGGCATTCTTAGAACAAAGACAGCCTTCTTCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: HSSPLSSRATSSSEA*FKAFLEQRQPSSSV
Trigger: CACTGAGGAAGAAGGCTGTCTTTGTTCTAAGAATGCCTTGAACAAAGCTTCAGAGGAGGAGGTTGCCCTGCTTGACAGAGGAGAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484123.1
CDS TCA 72 bp AGAACCAGCATTTGGTATCTGGTGAGGGCATCTTTCTaGGGGAAGGAAGGCTGTGTACTCAACAGAACAGAA +
Preference number: 6 (lower is better)
Translates to: RTSIWYLVRASF*GKEGCVLNRTE
Trigger: TTCTGTTCTGTTGAGTACACAGCCTTCCTTCCCTCAGAAAGATGCCCTCACCAGATACCAAATGCTGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472259.5
CDS TCA 72 bp CAACTCAACGCTGGATTTAAGTCATCAGGCTTTTTATaGAAAGAGGTTTGCCAATCAGCATCAAGAGATGTG +
Preference number: 6 (lower is better)
Translates to: QLNAGFKSSGFL*KEVCQSASRDV
Trigger: CACATCTCTTGATGCTGATTGGCAAACCTCTTTTCATAAAAAGCCTGATGACTTAAATCCAGCGTTGAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479293.5