Pregenerated sensors for SFXN4 (Homo sapiens)
Ensembl gene IDs: ENSG00000183605Ensembl transcript IDs: ENST00000355697.7, ENST00000369131.8, ENST00000419372.5, ENST00000461438.5, ENST00000462913.1, ENST00000466218.5, ENST00000490417.6
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCTCCCACTGTCTTCTCCAGCCAGCCTTAAAAACCCCAGAGACGCCAGCCTGGTCTCAGTATGGAATCTaGAGTCGCCTTGTCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: PSHCLLQPALKTPETPAWSQYGI*SRLVST Trigger: TGTGCTGACAAGGCGACTTCAGATTCCATACTGAGA...CCAGGCTGGCGTCTCTGGGGTTTTTAAGGCTGGCTGGAGAAGACAGTGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| 3UTR-3UTR CCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTCAGCACAGACACCTCTaGGGTCCCCAGAAGACCTGT | + |
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Preference number: 2 (lower is better) Translates to: LRRPIHLTPVSWARWTLCQHRHL*GPQKTC Trigger: ACAGGTCTTCTGGGGACCCCAGAGGTGTCTGTGCTG...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCACTGTCTTCTCCAGCCAGCCTTAAAAACCCCAGAGACGCCAGCCTGGTCTCTAAACCGAACCTaGAGAGGGGAAGGTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PSHCLLQPALKTPETPAWSLNRT*RGEGFQ Trigger: TTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGA...CCAGGCTGGCGTCTCTGGGGTTTTTAAGGCTGGCTGGAGAAGACAGTGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| 3UTR CCA 72 bp | AACCCCAGAGACGCCAGCCTGGGAACGATCTCAGTATaGAATCTGAAGTCGCCTTGTCAGCACAGACACCTC | + |
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Preference number: 3 (lower is better) Translates to: NPRDASLGTISV*NLKSPCQHRHL Trigger: GAGGTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGCGTCTCTGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | GGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCCGGGGACGGCGTCTCTaGGTCCTAGGAGCCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GVRVPLETAYPFNTCVLGRGRRL*VLGAAQ Trigger: CTGGGCGGCTCCTAGGACGCAGAGACGCCGTCCCCG...GCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | TATCCTTTCGCAGGCCGATCCCCACTCCAACCGTTCCCTCAGCAACCCCAGGGGATACCGTGGGTGCCATaGAAGGCAGGAACGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YPFAGRSPLQPFPQQPQGIPWVP*KAGTLQ Trigger: CTGCAGCGTTCCTGCCTTTCATGGCACCCACGGTAT...CCCCTGGGGTTGCTGAGGGAACGGTTGGAGTGGGGATCGGCCTGCGAAAGGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTGCACGTTGGGCTCAATaGAGGCGGGGACGGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCARWAQ*RRGRRL Trigger: GAGACGCCGTCCCCGCCTTCATTGAGCCCAACGTGC...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | CCCTCCCACTGTCTTCTCCAGCCAGCCTTAAAAACCCCAGAGACGCCAGCCTGGCCAGCAATTCTGGAATaGCCCAGGACATTGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSHCLLQPALKTPETPAWPAILE*PRTLPS Trigger: GGAAGGCAATGTCCTGGGTCATTCCAGAATTGCTGG...CCAGGCTGGCGTCTCTGGGGTTTTTAAGGCTGGCTGGAGAAGACAGTGGGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | CGCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGAGGGACATTTTGCGCTaGTTAGAGTGGCCGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: RQPGNDLSMESEVALSAQRDILR*LEWPPP Trigger: CGGCGGCGGCCACTCTAACCAGCGCAAAATGTCCCT...CTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTAGGATTGGCGCTCGGTaGTCCAGAAGCGCACGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCRIGAR*SRSARW Trigger: CCAACGTGCGCTTCTGGATCACCGAGCGCCAATCCT...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCTGGGGATCAGGTTGCTaGTGTCGGGATGCACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: APGVRVPLETAYPFNTCVWGSGC*CRDALL Trigger: CAACAGTGCATCCCGACAGCAGCAACCTGATCCCCA...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | TATCCTTTCGCAGGCCGATCCCCACTCCAACCGTTCCCTCAGCAACCCCAGGGGGTAAGGAAACAAGATTaGTTTTGGGGTTGGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: YPFAGRSPLQPFPQQPQGVRKQD*FWGWRA Trigger: CGCCCTCCAACCCCAAAAGCAATCTTGTTTCCTTAC...CCCCTGGGGTTGCTGAGGGAACGGTTGGAGTGGGGATCGGCCTGCGAAAGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCCGCCGAGGCAGGGCTaGAAACATCTTCATTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: APGVRVPLETAYPFNTCVPPRQG*KHLHLC Trigger: GCACAAATGAAGATGTTTCCAGCCCTGCCTCGGCGG...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTGCTTGGGGATCAGGTTaGTGCTGTCGGGATGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCAWGSG*CCRDAL Trigger: CAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGC...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTGCTTCTTGTATCCTTTaGTCCGCCGAGGCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCASCIL*SAEAGL Trigger: CAGCCCTGCCTCGGCGGACCAAAGGATACAAGAAGC...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCGTCGAATAAAGGATTaGCGCTCGGTGATCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: APGVRVPLETAYPFNTCVRRIKD*RSVIQK Trigger: CTTCTGGATCACCGAGCGCCAATCCTTTATTCGACG...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCAGGTCGAAAAAGCTTaGGGATCAGGTTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: APGVRVPLETAYPFNTCVQVEKA*GSGCCC Trigger: ACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTG...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACCAGAGACGCCAGCCTaGGAACGATCTCAGTATGGA | + |
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Preference number: 4 (lower is better) Translates to: ASLGTISVWNLKSPCQHRPETPA*ERSQYG Trigger: TCCATACTGAGATCGTTCCCAGGCTGGCGTCTCTGG...TCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | CGCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGGTGTCCTGGGCACGGTaGACTCTGTGTTCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RQPGNDLSMESEVALSAQVSWAR*TLCSFF Trigger: GAAGAAAGAACACAGAGTCCACCGTGCCCAGGACAC...CTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCATTAACACCTGTGTCCTaGGCACGGTGGACTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: GYVFRLRRPIHLTPVSWALTPVS*ARWTLC Trigger: ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAA...TGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCGCACAGAGGAAAACCTaGGGTAAAATCACGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: APGVRVPLETAYPFNTCVAQRKT*GKITDL Trigger: CAAGTCCGTGATTTTACCTCAGGTTTTCCTCTGTGC...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCTTCAGGAATCAGAGCTaGGGTCCCAAACAGCACTAT | + |
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Preference number: 4 (lower is better) Translates to: APGVRVPLETAYPFNTCVFRNQS*GPKQHY Trigger: ATAGTGCTGTTTGGGACCTCAGCTCTGATTCCTGAA...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | CTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACACCTCTTGCTGCTGTCGGGATaGACTGTTGCAAGACTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LGTISVWNLKSPCQHRHLLLLSG*TVARLR Trigger: GCGGAGTCTTGCAACAGTGCATCCCGACAGCAGCAA...GAGGTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | CGCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGGTAAAATCACGGACTTaGTCCCTTTCAGTGGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: RQPGNDLSMESEVALSAQVKSRT*SLSVAS Trigger: TGACGCCACTGAAAGGGATCAAGTCCGTGATTTTAC...CTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | GCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGAGATGCTGTTGAACGCTaGCATGTAGGCACAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ASLGTISVWNLKSPCQHRDAVER*HVGTEE Trigger: TTCCTCTGTGCCTACATGGCAGCGTTCAACAGCATC...TCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCATCCCCAGAAGACCTGTaGCAAAGTTCTCTAAACCGA | + |
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Preference number: 4 (lower is better) Translates to: GYVFRLRRPIHLTPVSWASPEDL*QSSLNR Trigger: TCGGTTTAGAGAACTTTGCCACAGGTCTTCTGGGGA...TGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTTTGTCCCAGCAATTCTaGAATGACCCAGGACATTGC | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCLSQQF*NDPGHC Trigger: GCAATGTCCTGGGTCATTCCAGAATTGCTGGGACAA...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | CTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACACCTCTTTCAGTGGCGTCATTaGCAAAAATACCGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LGTISVWNLKSPCQHRHLFQWRH*QKYRGC Trigger: GCACCCACGGTATTTTTGTCAATGACGCCACTGAAA...GAGGTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | AAGTTCTCTAAACCGAACCTGGAGAGGGGAAGGTTTTCAAGCAGGAACCACATAGTCGGGATGCACTGTTaGAAGACTCCGCTTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: KFSKPNLERGRFSSRNHIVGMHC*KTPLPS Trigger: GCTTGGAAGCGGAGTCTTGCAACAGTGCATCCCGAC...TATGTGGTTCCTGCTTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTAGACATTCATTCCACTaGCTTGCACGAGGAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCRHSFH*LARGRS Trigger: TGATCTTCCTCGTGCAAGCCAGTGGAATGAATGTCT...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | GCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGAGGAACGATCTCAGTATaGAATCTGAAGTCGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ASLGTISVWNLKSPCQHRGTISV*NLKSPC Trigger: ACAAGGCGACTTCAGATTCCATACTGAGATCGTTCC...TCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTTTCATCTGGACAAACTaGGGGATTACTCCTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCFIWTN*GITPKK Trigger: TTTCTTAGGAGTAATCCCTCAGTTTGTCCAGATGAA...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTTTTCAAAATCCACAATaGCCCTGGGTTTTTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCFQNPQ*PWVFPE Trigger: TTCAGGAAAAACCCAGGGTCATTGTGGATTTTGAAA...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR TCA 90 bp | AAGTTCTCTAAACCGAACCTGGAGAGGGGAAGGTTTTCAAGCAGGAACCACATATCTCAGTATGGAATCTaGAGTCGCCTTGTCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KFSKPNLERGRFSSRNHISQYGI*SRLVST Trigger: TGTGCTGACAAGGCGACTTCAGATTCCATACTGAGA...TATGTGGTTCCTGCTTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR GCA 90 bp | GTAAACAGCGCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACTTTGTGCACAATAGTTaGCTCGAGTTTTCTATACTT | + |
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Preference number: 4 (lower is better) Translates to: VNSAPGVRVPLETAYPFNFVHNS*LEFSIL Trigger: AAGTATAGAAAACTCGAGGCAACTATTGTGCACAAA...GTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGCGCTGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTTATACTAAAAGAAAATaGCACCATCAGTCCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: LRRPIHLTPVSWARWTLCYTKRK*HHQSHC Trigger: GCAATGGGACTGATGGTGCCATTTTCTTTTAGTATA...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CCA 90 bp | AAGTTCTCTAAACCGAACCTGGAGAGGGGAAGGTTTTCAAGCAGGAACCACATATCTCTAAACCGAACCTaGAGAGGGGAAGGTTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KFSKPNLERGRFSSRNHISLNRT*RGEGFQ Trigger: TTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGA...TATGTGGTTCCTGCTTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS TCA 90 bp | GCCACCTGCGCGGACTGGGCCCCTCCGAGAGGGCAATCTGGAGGGTaGCGTTGTGGTCGTGGGCATCTGGCAGCTTCGATTTCCCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: ATCADWAPPRGQSGG*RCGRGHLAASISPA Trigger: CGCAGGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCCCAGTCCGCGCAGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 90 bp | CTCCGAGAGGGCAATCTGGAGGGTGACGTTGTGGTCGTGGGCATCTaGCAGCTTCGATTTCCCCTGCGTCCCCTGCCGCGCCCTAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LREGNLEGDVVVVGI*QLRFPLRPLPRPKG Trigger: CCCCTTAGGGCGCGGCAGGGGACGCAGGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 90 bp | GGGAGCAGCCACCTGCGCGGACTGGGCCCCTCCGAGAGGGCAATCTaGAGGGTGACGTTGTGGTCGTGGGCATCTGGCAGCTTCGATTTC | + |
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Preference number: 5 (lower is better) Translates to: GSSHLRGLGPSERAI*RVTLWSWASGSFDF Trigger: GAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCCCAGTCCGCGCAGGTGGCTGCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS GCA 90 bp | ATGAAGGCGGGGACGGCGTCTCTGCGTCCTAGGAGCCGCCCAGGTTaGGTTTCCTCCTCCTGTTCCAGGGACATTTTGCGCTGGTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: MKAGTASLRPRSRPG*VSSSCSRDILRWLE Trigger: CTCTAACCAGCGCAAAATGTCCCTGGAACAGGAGGAGGAAACGCAACCTGGGCGGCTCCTAGGACGCAGAGACGCCGTCCCCGCCTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS GCA 90 bp | AAGGCAGGAACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTTGCTaGTGTCGGGATGCACTGTTGCCCTTTGGTCCGCCGAGGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KAGTLQVEKAWGSGC*CRDALLPFGPPRQG Trigger: GCCCTGCCTCGGCGGACCAAAGGGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGTTCCTGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000419372.5 ENST00000462913.1 ENST00000466218.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCCACTGTCTTCTCCAGCCAGCCTTAAAAACCCCAGAGACGCCAGCCTGGAGCTTCTTGTATCCTTaGGTCCGCCGAGGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PSHCLLQPALKTPETPAWSFLYP*VRRGRA Trigger: AGCCCTGCCTCGGCGGACCAAAGGATACAAGAAGCT...CCAGGCTGGCGTCTCTGGGGTTTTTAAGGCTGGCTGGAGAAGACAGTGGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS GCA 90 bp | TCGTCGAATAAAGGACAAGGTGCGAGAGCCTGTTTCTCCCCAATCTaGTGCTCAGCCACAGCTCAGGCAGTAGGGAGCAGCCACCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: SSNKGQGARACFSPI*CSATAQAVGSSHLR Trigger: GCGCAGGTGGCTGCTCCCTACTGCCTGAGCTGTGGCTGAGCAGCAGATTGGGGAGAAACAGGCTCTCGCACCTTGTCCTTTATTCGACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCCACTGTCTTCTCCAGCCAGCCTTAAAAACCCCAGAGACGCCAGCCTGGTGTTCCAGGGACATTTaGCGCTGGTTAGAGTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: PSHCLLQPALKTPETPAWCSRDI*RWLEWP Trigger: CGGCCACTCTAACCAGCGCAAAATGTCCCTGGAACA...CCAGGCTGGCGTCTCTGGGGTTTTTAAGGCTGGCTGGAGAAGACAGTGGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCATCCAGAAGCGCACGTaGGGCTCAATGAAGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GVRVPLETAYPFNTCVLGIQKRT*GSMKAG Trigger: CCCCGCCTTCATTGAGCCCAACGTGCGCTTCTGGAT...GCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | TATCCTTTCGCAGGCCGATCCCCACTCCAACCGTTCCCTCAGCAACCCCAGGGGTCGTCGAATAAAGGATaGGCGCTCGGTGATCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YPFAGRSPLQPFPQQPQGSSNKG*ALGDPE Trigger: TTCTGGATCACCGAGCGCCAATCCTTTATTCGACGA...CCCCTGGGGTTGCTGAGGGAACGGTTGGAGTGGGGATCGGCCTGCGAAAGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | TATCCTTTCGCAGGCCGATCCCCACTCCAACCGTTCCCTCAGCAACCCCAGGGGAGTAAGGAAACAAGATaGCTTTTGGGGTTGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: YPFAGRSPLQPFPQQPQGSKETR*LLGLEG Trigger: GCCCTCCAACCCCAAAAGCAATCTTGTTTCCTTACT...CCCCTGGGGTTGCTGAGGGAACGGTTGGAGTGGGGATCGGCCTGCGAAAGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCGCACCATCAGTCCCATaGCCAGGACAGTACAAGACA | + |
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Preference number: 5 (lower is better) Translates to: APGVRVPLETAYPFNTCVAPSVP*PGQYKT Trigger: TGTCTTGTACTGTCCTGGCAATGGGACTGATGGTGC...GACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCAAGATTGCTTTTGGGGTaGGAGGGCGTAAACAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GYVFRLRRPIHLTPVSWARLLLG*EGVNSA Trigger: GGCGCTGTTTACGCCCTCCAACCCCAAAAGCAATCT...TGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | CTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACACCTCAGCTTGGGGATCAGGTaGCTGCTGTCGGGATGCACT | + |
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Preference number: 5 (lower is better) Translates to: LGTISVWNLKSPCQHRHLSLGIR*LLSGCT Trigger: AGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCT...GAGGTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | TTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCACGGTGGACTCTGTGTGCAGGTCGAAAAAGCTaGGGGATCAGGTTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LRRPIHLTPVSWARWTLCAGRKS*GIRLLL Trigger: CAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGC...ACACAGAGTCCACCGTGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCAGGTAAAATCACGGACTaGATCCCTTTCAGTGGCGTC | + |
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Preference number: 5 (lower is better) Translates to: GYVFRLRRPIHLTPVSWAGKITD*IPFSGV Trigger: GACGCCACTGAAAGGGATCAAGTCCGTGATTTTACC...TGCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | CTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACACCTCAGGACATTGCCTTCCTaGTCCATGACCGCAATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGTISVWNLKSPCQHRHLRTLPS*SMTAIP Trigger: GGGGATTGCGGTCATGGACAAGGAAGGCAATGTCCT...GAGGTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGAGGGTACGTGTTCCGCTaGAGACGGCCTATCCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASLGTISVWNLKSPCQHRGYVFR*RRPIHL Trigger: TAAATGGATAGGCCGTCTCAAGCGGAACACGTACCC...TCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACACCTGTGTCCTGGGCGAAACAAGATTGCTTTaGGGGTTGGAGGGCGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVRVPLETAYPFNTCVLGETRLL*GLEGVN Trigger: GTTTACGCCCTCCAACCCCAAAAGCAATCTTGTTTC...GCCCAGGACACAGGTGTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GTAAACAGCGCCCCAGGGGTACGTGTTCCGCTTGAGACGGCCTATCCATTTAACCTTTCAGTGGCGTCATaGACAAAAATACCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VNSAPGVRVPLETAYPFNLSVAS*TKIPWV Trigger: CACCCACGGTATTTTTGTCAATGACGCCACTGAAAG...GTTAAATGGATAGGCCGTCTCAAGCGGAACACGTACCCCTGGGGCGCTGTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | CTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACACCTCGAATCTGAAGTCGCCTaGTCAGCACAGACACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTISVWNLKSPCQHRHLESEVA*SAQTPL Trigger: CAGAGGTGTCTGTGCTGACAAGGCGACTTCAGATTC...GAGGTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGACACATTCATTCCACTGGCTaGCACGAGGAAGATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGTISVWNLKSPCQHRHIHSTG*HEEDHR Trigger: CCTGTGATCTTCCTCGTGCAAGCCAGTGGAATGAAT...GTGTCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS CCA 90 bp | GCTTCCAAGCTTCTTGTATCCAGTTTTGCAAAGCTGGTCCTCCTTTaGTCCGCCGAGGCAGGGCTGGAAACATCTTCATTTGTGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASKLLVSSFAKLVLL*SAEAGLETSSFVHN Trigger: ATTGTGCACAAATGAAGATGTTTCCAGCCCTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGCTTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS-3UTR CAA 90 bp | AAGTTCTCTAAACCGAACCTGGAGAGGGGAAGGTTTTCAAGCAGGAACCACATACCGCTTCCAAGCTTCTaGTATCCTTTGGTCCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KFSKPNLERGRFSSRNHIPLPSF*YPLVRR Trigger: TCGGCGGACCAAAGGATACAAGAAGCTTGGAAGCGG...TATGTGGTTCCTGCTTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGGGAACGATCTCAGTATGGAATCTGAAGTCGCCTTGTCAGCACAGATGGAAACATCTTCATTaGTGCACAATAGTTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASLGTISVWNLKSPCQHRWKHLH*CTIVAS Trigger: CGAGGCAACTATTGTGCACAAATGAAGATGTTTCCA...TCTGTGCTGACAAGGCGACTTCAGATTCCATACTGAGATCGTTCCCAGGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS-3UTR CAA 90 bp | AAGTTCTCTAAACCGAACCTGGAGAGGGGAAGGTTTTCAAGCAGGAACCACATATTACTCCTAAGAAAGTaGAAGAAGCAACGGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KFSKPNLERGRFSSRNHILLLRK*KKQRLP Trigger: CGGGAGCCGTTGCTTCTTCAACTTTCTTAGGAGTAA...TATGTGGTTCCTGCTTGAAAACCTTCCCCTCTCCAGGTTCGGTTTAGAGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355697.7 |
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| CDS GCA 72 bp | GTCCCCTGCCGCGCCCTAAGGGGTGAAGGCCGGTGGTaGGCGTTCCCGGCACAACTCCGAGAGGAGGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: VPCRALRGEGRW*AFPAQLREEET Trigger: CGTTTCCTCCTCTCGGAGTTGTGCCGGGAACGCGCACCACCGGCCTTCACCCCTTAGGGCGCGGCAGGGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 72 bp | TGCGTCCCCTGCCGCGCCCTAAGGGGTGAAGGCCGGTaGTGCGCGTTCCCGGCACAACTCCGAGAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CVPCRALRGEGR*CAFPAQLREEE Trigger: TTCCTCCTCTCGGAGTTGTGCCGGGAACGCGCACCACCGGCCTTCACCCCTTAGGGCGCGGCAGGGGACGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 72 bp | CACCTGCGCGGACTGGGCCCCTCCGAGAGGGCAATCTaGAGGGTGACGTTGTGGTCGTGGGCATCTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLRGLGPSERAI*RVTLWSWASGS Trigger: GCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCCCAGTCCGCGCAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CAA 90 bp | CTGCGCGGACTGGGCCCCTCCGAGAGGGCAATCTGGAGGGTGACGTaGTGGTCGTGGGCATCTGGCAGCTTCGATTTCCCCTGCGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRGLGPSERAIWRVT*WSWASGSFDFPCVP Trigger: GGGGACGCAGGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCCCAGTCCGCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 72 bp | GGCAATCTGGAGGGTGACGTTGTGGTCGTGGGCATCTaGCAGCTTCGATTTCCCCTGCGTCCCCTGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GNLEGDVVVVGI*QLRFPLRPLPR Trigger: GCGCGGCAGGGGACGCAGGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS TCA 72 bp | GCGGACTGGGCCCCTCCGAGAGGGCAATCTGGAGGGTaGCGTTGTGGTCGTGGGCATCTGGCAGCTTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: ADWAPPRGQSGG*RCGRGHLAASI Trigger: AATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCCCAGTCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 72 bp | GGCCCCTCCGAGAGGGCAATCTGGAGGGTGACGTTGTaGTCGTGGGCATCTGGCAGCTTCGATTTCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPSERAIWRVTL*SWASGSFDFPC Trigger: GCAGGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CAA 72 bp | CTGGGCCCCTCCGAGAGGGCAATCTGGAGGGTGACGTaGTGGTCGTGGGCATCTGGCAGCTTCGATTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPSERAIWRVT*WSWASGSFDFP Trigger: GGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGAGGGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS CCA 72 bp | TCCGAGAGGGCAATCTGGAGGGTGACGTTGTGGTCGTaGGCATCTGGCAGCTTCGATTTCCCCTGCGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SERAIWRVTLWS*ASGSFDFPCVP Trigger: GGGGACGCAGGGGAAATCGAAGCTGCCAGATGCCCACGACCACAACGTCACCCTCCAGATTGCCCTCTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS GCA 72 bp | GGACAAGGTGCGAGAGCCTGTTTCTCCCCAATCTGCTaGTCAGCCACAGCTCAGGCAGTAGGGAGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQGARACFSPIC*SATAQAVGSSH Trigger: GTGGCTGCTCCCTACTGCCTGAGCTGTGGCTGAGCAGCAGATTGGGGAGAAACAGGCTCTCGCACCTTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS GCA 72 bp | ACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTTGCTaGTGTCGGGATGCACTGTTGCCCTTTGGTCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TLQVEKAWGSGC*CRDALLPFGPP Trigger: CGGCGGACCAAAGGGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000419372.5 ENST00000462913.1 ENST00000466218.5 |
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| CDS CAA 72 bp | ATAAAGGATTGGCGCTCGGTGATCCAGAAGCGCACGTaGGGCTCAATGAAGGCGGGGACGGCGTCTCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: IKDWRSVIQKRT*GSMKAGTASLR Trigger: ACGCAGAGACGCCGTCCCCGCCTTCATTGAGCCCAACGTGCGCTTCTGGATCACCGAGCGCCAATCCTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000355697.7 ENST00000461438.5 ENST00000466218.5 |
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| CDS CAA 90 bp | AATCGTCGAATAAAGGATTGGCGCTCGGTGATCCAGAAGCGCACGTaGGGCTCAATGAAGGCGGGGACGGCGTCTCTGCGTCCTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NRRIKDWRSVIQKRT*GSMKAGTASLRPRS Trigger: GCTCCTAGGACGCAGAGACGCCGTCCCCGCCTTCATTGAGCCCAACGTGCGCTTCTGGATCACCGAGCGCCAATCCTTTATTCGACGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000355697.7 ENST00000461438.5 ENST00000466218.5 |
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| CDS CAA 90 bp | ATGAAAGGCAGGAACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTaGCTGCTGTCGGGATGCACTGTTGCCCTTTGGTCCGCCGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MKGRNAAGRKSLGIR*LLSGCTVALWSAEA Trigger: TGCCTCGGCGGACCAAAGGGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGTTCCTGCCTTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000419372.5 ENST00000462913.1 ENST00000466218.5 |
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| CDS GCA 72 bp | AAAGGACAAGGTGCGAGAGCCTGTTTCTCCCCAATCTaGTGCTCAGCCACAGCTCAGGCAGTAGGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KGQGARACFSPI*CSATAQAVGSS Trigger: GCTGCTCCCTACTGCCTGAGCTGTGGCTGAGCAGCAGATTGGGGAGAAACAGGCTCTCGCACCTTGTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369131.8 ENST00000419372.5 |
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| CDS GCA 72 bp | GGAACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTTaGTGCTGTCGGGATGCACTGTTGCCCTTTGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GTLQVEKAWGSG*CCRDALLPFGP Trigger: CGGACCAAAGGGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000419372.5 ENST00000462913.1 ENST00000466218.5 |
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| CDS GCA 72 bp | ACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTTGCTaGTGTCGGGATGCACTGTTGCAAGACTCCGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLQVEKAWGSGC*CRDALLQDSAS Trigger: GGAAGCGGAGTCTTGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355697.7 ENST00000369131.8 ENST00000461438.5 |
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| CDS CAA 72 bp | AGGAACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTaGCTGCTGTCGGGATGCACTGTTGCAAGACTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RNAAGRKSLGIR*LLSGCTVARLR Trigger: GCGGAGTCTTGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355697.7 ENST00000369131.8 ENST00000461438.5 |
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| CDS CAA 72 bp | AGGAACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTaGCTGCTGTCGGGATGCACTGTTGCCCTTTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RNAAGRKSLGIR*LLSGCTVALWS Trigger: GGACCAAAGGGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000419372.5 ENST00000462913.1 ENST00000466218.5 |
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| CDS CAA 90 bp | GCTGCTGTCGGGATGCACTGTTGCAAGACTCCGCTTCCAAGCTTCTaGTATCCAGTTTTGCAAAGCTGGTCCTCCTTTGGTCCGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAVGMHCCKTPLPSF*YPVLQSWSSFGPPR Trigger: CCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGCTTGGAAGCGGAGTCTTGCAACAGTGCATCCCGACAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS GCA 72 bp | GCAAGACTCCGCTTCCAAGCTTCTTGTATCCAGTTTTaGAAAGCTGGTCCTCCTTTGGTCCGCCGAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARLRFQASCIQF*KAGPPLVRRGR Trigger: CCTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGCTTGGAAGCGGAGTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS CCA 72 bp | CCGCTTCCAAGCTTCTTGTATCCAGTTTTGCAAAGCTaGTCCTCCTTTGGTCCGCCGAGGCAGGGCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PLPSFLYPVLQS*SSFGPPRQGWK Trigger: TTTCCAGCCCTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGCTTGGAAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS CAA 90 bp | ATGAAAGGCAGGAACGCTGCAGGTCGAAAAAGCTTGGGGATCAGGTaGCTGCTGTCGGGATGCACTGTTGCAAGACTCCGCTTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MKGRNAAGRKSLGIR*LLSGCTVARLRFQA Trigger: AGCTTGGAAGCGGAGTCTTGCAACAGTGCATCCCGACAGCAGCAACCTGATCCCCAAGCTTTTTCGACCTGCAGCGTTCCTGCCTTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355697.7 ENST00000369131.8 ENST00000461438.5 |
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| CDS CAA 72 bp | TGCAAGACTCCGCTTCCAAGCTTCTTGTATCCAGTTTaGCAAAGCTGGTCCTCCTTTGGTCCGCCGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CKTPLPSFLYPV*QSWSSFGPPRQ Trigger: CTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGCTTGGAAGCGGAGTCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS CAA 90 bp | CGCTTCCAAGCTTCTTGTATCCAGTTTTGCAAAGCTGGTCCTCCTTaGGTCCGCCGAGGCAGGGCTGGAAACATCTTCATTTGTGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: RFQASCIQFCKAGPP*VRRGRAGNIFICAQ Trigger: TTGTGCACAAATGAAGATGTTTCCAGCCCTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGCTTGGAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS CAA 72 bp | GCTTCTTGTATCCAGTTTTGCAAAGCTGGTCCTCCTTaGGTCCGCCGAGGCAGGGCTGGAAACATCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: ASCIQFCKAGPP*VRRGRAGNIFI Trigger: AATGAAGATGTTTCCAGCCCTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS CCA 72 bp | CTTCTTGTATCCAGTTTTGCAAAGCTGGTCCTCCTTTaGTCCGCCGAGGCAGGGCTGGAAACATCTTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVSSFAKLVLL*SAEAGLETSSF Trigger: AAATGAAGATGTTTCCAGCCCTGCCTCGGCGGACCAAAGGAGGACCAGCTTTGCAAAACTGGATACAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461438.5 |
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| CDS CAA 72 bp | TTTGGTCCGCCGAGGCAGGGCTGGAAACATCTTCATTaGTGCACAATAGTTGCCTCGAGTTTTCTATACTTT | + |
|
Preference number: 6 (lower is better) Translates to: FGPPRQGWKHLH*CTIVASSFLYF Trigger: AAAGTATAGAAAACTCGAGGCAACTATTGTGCACAAATGAAGATGTTTCCAGCCCTGCCTCGGCGGACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000355697.7 ENST00000369131.8 ENST00000419372.5 ENST00000461438.5 ENST00000462913.1 ENST00000466218.5 |
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| CDS TCA 72 bp | TGCCAGGACAGTACAAGACAGTTTCAAAATCCACAATaGCCCTGGGTTTTTCCTGAAATACTGGGTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CQDSTRQFQNPQ*PWVFPEILGPF Trigger: AAAAGGACCCAGTATTTCAGGAAAAACCCAGGGTCATTGTGGATTTTGAAACTGTCTTGTACTGTCCTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000355697.7 ENST00000461438.5 ENST00000490417.6 |
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