RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFXN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000107819

Ensembl transcript IDs: ENST00000224807.9, ENST00000393459.5, ENST00000465383.5, ENST00000466982.1, ENST00000470252.1, ENST00000487721.1, ENST00000489434.3

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATTCCCTGCTTGGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTaGCTCATCAGCCACCGGGATGCCCACCTGCAGCTCTCTCTGCCT +
Preference number: 1 (lower is better)
Translates to: DSLLGCSHRVAKPLT*LISHRDAHLQLSLP
Trigger: AGGCAGAGAGAGCTGCAGGTGGGCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAGCAGGGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
3UTR GCA 90 bp AGGTCCCTCCCCCACCCTAATAGGTTGCTACCCTCAATTGCCATCTaGCCACCAAGGCCCCTGCCCAGTGCTAGGCAGATAGCCAAGTGG +
Preference number: 1 (lower is better)
Translates to: RSLPHPNRLLPSIAI*PPRPLPSARQIAKW
Trigger: CCACTTGGCTATCTGCCTAGCACTGGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGGGAGGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR TCA 90 bp GAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTaGAGATGCCCACGCTGTCAAGTAGGGTGGTGGGGGAGACAGCGA +
Preference number: 1 (lower is better)
Translates to: EVMMSEHTRNSQGCA*RCPRCQVGWWGRQR
Trigger: TCGCTGTCTCCCCCACCACCCTACTTGACAGCGTGGGCATCTTCAGGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 90 bp GGATGCATAAGTCCCCTGCCTCCCTTGTCTCAACATGTTCTCCTCTaGCAGCCCAGTCAGCTTGGGGAGCTAGGTATCAGAAACCTGAAG +
Preference number: 1 (lower is better)
Translates to: GCISPLPPLSQHVLL*QPSQLGELGIRNLK
Trigger: CTTCAGGTTTCTGATACCTAGCTCCCCAAGCTGACTGGGCTGGCAGAGGAGAACATGTTGAGACAAGGGAGGCAGGGGACTTATGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR CCA 90 bp GCCTCCCTTGTCTCAACATGTTCTCCTCTGCCAGCCCAGTCAGCTTaGGGAGCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGT +
Preference number: 1 (lower is better)
Translates to: ASLVSTCSPLPAQSA*GARYQKPEGFSPLC
Trigger: ACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGCTCCCCAAGCTGACTGGGCTGGCAGAGGAGAACATGTTGAGACAAGGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR CCA 90 bp ATCTGCCCTGCCCCACCCACCACTGAAGCCAGAGGTCATGGGAGTTaGGATCTAACTACACTCTGTGAACTTACCACCACCCATTCCATC +
Preference number: 1 (lower is better)
Translates to: ICPAPPTTEARGHGS*DLTTLCELTTTHSI
Trigger: GATGGAATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCTGGCTTCAGTGGTGGGTGGGGCAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 90 bp GGGGAAATGGAGCTATTCCAGGATACAAGGGATGGCACTGAGGGATaGATAAGTCCCCTGCCTCCCTTGTCTCAACATGTTCTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: GEMELFQDTRDGTEG*ISPLPPLSQHVLLC
Trigger: GCAGAGGAGAACATGTTGAGACAAGGGAGGCAGGGGACTTATGCATCCCTCAGTGCCATCCCTTGTATCCTGGAATAGCTCCATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR TCA 90 bp ATGCATGGACACTCAAGCACAGGAGGGGTTATGTGCTCTGATCTTTaGAACCAGAGAAGGGAGGAAAAGCCTTATGGAGGTCCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: MHGHSSTGGVMCSDL*NQRREEKPYGGPSP
Trigger: GGGGGAGGGACCTCCATAAGGCTTTTCCTCCCTTCTCTGGTTTCAAAGATCAGAGCACATAACCCCTCCTGTGCTTGAGTGTCCATGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 90 bp GAGGCTGAGAAGGGAAGCCAGATGTCAGAACATACTAGGCTAGCATaGCTGCTTCTAGCTTTCAGGACCCAATGTACACATACACATGTG +
Preference number: 1 (lower is better)
Translates to: EAEKGSQMSEHTRLA*LLLAFRTQCTHTHV
Trigger: CACATGTGTATGTGTACATTGGGTCCTGAAAGCTAGAAGCAGGCATGCTAGCCTAGTATGTTCTGACATCTGGCTTCCCTTCTCAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR CAA 90 bp GTGGTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTaGTCTGGTAGAGAGGAGGAGGGGAAATGGAGCTATTCCAGGATA +
Preference number: 2 (lower is better)
Translates to: VVGETARAVQDTGTP*SGREEEGKWSYSRI
Trigger: TATCCTGGAATAGCTCCATTTCCCCTCCTCCTCTCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCCCTCAATTGCCATCTaGCCACCAAGGCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAPSIAI*PPRPLP
Trigger: GGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCGCTGTCAAGTAGGGTaGTGGGGGAGACAGCGAGGG +
Preference number: 2 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKRCQVG*WGRQRG
Trigger: CCCTCGCTGTCTCCCCCACCACCCTACTTGACAGCG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGTCACACCTGTAGCCTaGCTGGCAGGCAGGTGGACA +
Preference number: 2 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAVTPVA*LAGRWT
Trigger: TGTCCACCTGCCTGCCAGCCAGGCTACAGGTGTGAC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR TCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAATGTGCTCTGATCTTTaGAACCAGAGAAGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: VGETARAVQDTGTPLSGRMCSDL*NQRREE
Trigger: TTCCTCCCTTCTCTGGTTTCAAAGATCAGAGCACAT...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCCCTCAATTGCCATCTaGCCACCAAGGCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYPSIAI*PPRPLP
Trigger: GGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGGGGAATGCTTGCTCTaGCTCTGTGGCTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCGECLL*LCGFLF
Trigger: AAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGGAGGAAAAGCCTTATaGAGGTCCCTCCCCCACCCT +
Preference number: 2 (lower is better)
Translates to: VEALKGECLLCLCGFLFGGGKAL*RSLPHP
Trigger: AGGGTGGGGGAGGGACCTCCATAAGGCTTTTCCTCC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGAGGAGGAGGGGAAATaGAGCTATTCCAGGATACAA +
Preference number: 2 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCEEEGK*SYSRIQ
Trigger: TTGTATCCTGGAATAGCTCCATTTCCCCTCCTCCTC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGTTGCTACCCTCAATTaGCATCTGCCCACCAAGGCC +
Preference number: 2 (lower is better)
Translates to: VEALKGECLLCLCGFLFGVATLN*HLPTKA
Trigger: GGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAAC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGAACTCCCAAGGCTGTaGCTGAAGATGCCCACGCTG +
Preference number: 2 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHELPRL*LKMPTL
Trigger: CAGCGTGGGCATCTTCAGGCACAGCCTTGGGAGTTC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGTCACACCTGTAGCCTaGCTGGCAGGCAGGTGGACA +
Preference number: 2 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYVTPVA*LAGRWT
Trigger: TGTCCACCTGCCTGCCAGCCAGGCTACAGGTGTGAC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCCTGTGGCTTTTTGTTTaGGAAAGGGAGTTGGGATTG +
Preference number: 2 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCLWLFV*ERELGL
Trigger: CAATCCCAACTCCCTTTCCCAAACAAAAAGCCACAG...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR TCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGTACAAGGGATGGCACTaGGGGATGCATAAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: VEALKGECLLCLCGFLFGYKGWH*GMHKSP
Trigger: AGGGGACTTATGCATCCCTCAGTGCCATCCCTTGTA...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR TCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATTACAAGGGATGGCACTaGGGGATGCATAAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHYKGWH*GMHKSP
Trigger: AGGGGACTTATGCATCCCTCAGTGCCATCCCTTGTA...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCGTTGCTACCCTCAATTaGCATCTGCCCACCAAGGCC +
Preference number: 2 (lower is better)
Translates to: KDSARFVLLVSISLCPEIVATLN*HLPTKA
Trigger: GGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAAC...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCTATCATGTATGTATATaGATGGACACTCAAGCACAG +
Preference number: 2 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCYHVCI*MDTQAQ
Trigger: CTGTGCTTGAGTGTCCATGCATATACATACATGATA...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGCATACTAGGCTAGCATaGCTGCTTCTAGCTTTCAGG +
Preference number: 2 (lower is better)
Translates to: VEALKGECLLCLCGFLFGHTRLA*LLLAFR
Trigger: CCTGAAAGCTAGAAGCAGGCATGCTAGCCTAGTATG...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCATACTAGGCTAGCATaGCTGCTTCTAGCTTTCAGG +
Preference number: 2 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKHTRLA*LLLAFR
Trigger: CCTGAAAGCTAGAAGCAGGCATGCTAGCCTAGTATG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR TCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATATGTGCTCTGATCTTTaGAACCAGAGAAGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHMCSDL*NQRREE
Trigger: TTCCTCCCTTCTCTGGTTTCAAAGATCAGAGCACAT...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCCCACCCTAATAGGTTaGTACCCTCAATTGCCATCT +
Preference number: 2 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYPTLIG*YPQLPS
Trigger: AGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCTGTGGCTTTTTGTTTaGGAAAGGGAGTTGGGATTG +
Preference number: 2 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHLWLFV*ERELGL
Trigger: CAATCCCAACTCCCTTTCCCAAACAAAAAGCCACAG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTATCATGTATGTATATaGATGGACACTCAAGCACAG +
Preference number: 2 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAYHVCI*MDTQAQ
Trigger: CTGTGCTTGAGTGTCCATGCATATACATACATGATA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 72 bp CTTGGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTaGCTCATCAGCCACCGGGATGCCCACCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: LGCSHRVAKPLT*LISHRDAHLQL
Trigger: GAGCTGCAGGTGGGCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
3UTR-3UTR CAA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCCTCATCAGGGGGATGTaGATGCAGTTGGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCLIRGM*MQLAAA
Trigger: GGCAGCTGCCAACTGCATCAACATCCCCCTGATGAG...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
3UTR GCA 72 bp CCCCACCCTAATAGGTTGCTACCCTCAATTGCCATCTaGCCACCAAGGCCCCTGCCCAGTGCTAGGCAGATA +
Preference number: 3 (lower is better)
Translates to: PHPNRLLPSIAI*PPRPLPSARQI
Trigger: TATCTGCCTAGCACTGGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 72 bp AAGCCTTATGGAGGTCCCTCCCCCACCCTAATAGGTTaGTACCCTCAATTGCCATCTGCCCACCAAGGCCCC +
Preference number: 3 (lower is better)
Translates to: KPYGGPSPTLIG*YPQLPSAHQGP
Trigger: GGGGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGGGAGGGACCTCCATAAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 72 bp AGTCCCCTGCCTCCCTTGTCTCAACATGTTCTCCTCTaGCAGCCCAGTCAGCTTGGGGAGCTAGGTATCAGA +
Preference number: 3 (lower is better)
Translates to: SPLPPLSQHVLL*QPSQLGELGIR
Trigger: TCTGATACCTAGCTCCCCAAGCTGACTGGGCTGGCAGAGGAGAACATGTTGAGACAAGGGAGGCAGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 72 bp CATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTaGCTGAAGATGCCCACGCTGTCAAGTAGGGTGGTG +
Preference number: 3 (lower is better)
Translates to: HDVRAHQELPRL*LKMPTLSSRVV
Trigger: CACCACCCTACTTGACAGCGTGGGCATCTTCAGGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR CCA 72 bp GTCTCAACATGTTCTCCTCTGCCAGCCCAGTCAGCTTaGGGAGCTAGGTATCAGAAACCTGAAGGATTCAGC +
Preference number: 3 (lower is better)
Translates to: VSTCSPLPAQSA*GARYQKPEGFS
Trigger: GCTGAATCCTTCAGGTTTCTGATACCTAGCTCCCCAAGCTGACTGGGCTGGCAGAGGAGAACATGTTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CAA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGTTTGGGAAAGGGAGTaGGGATTGGAGGATTTAGAT +
Preference number: 3 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCVWERE*GLEDLD
Trigger: ATCTAAATCCTCCAATCCCAACTCCCTTTCCCAAAC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CAA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGGTTGCTACCCTCAATaGCCATCTGCCCACCAAGGC +
Preference number: 3 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYGCYPQ*PSAHQG
Trigger: GCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CAA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCCCCACCCTAATAGGTaGCTACCCTCAATTGCCATC +
Preference number: 3 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAPHPNR*LPSIAI
Trigger: GATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR TCA 72 bp CAGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTaGACTTACCACCACCCATTCCATCCCCAAGCCCAT +
Preference number: 3 (lower is better)
Translates to: QRSWELGSNYTL*TYHHPFHPQAH
Trigger: ATGGGCTTGGGGATGGAATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR GCA 72 bp GAGCTATTCCAGGATACAAGGGATGGCACTGAGGGATaGATAAGTCCCCTGCCTCCCTTGTCTCAACATGTT +
Preference number: 3 (lower is better)
Translates to: ELFQDTRDGTEG*ISPLPPLSQHV
Trigger: AACATGTTGAGACAAGGGAGGCAGGGGACTTATGCATCCCTCAGTGCCATCCCTTGTATCCTGGAATAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR-3UTR CAA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCCCCACCCTAATAGGTaGCTACCCTCAATTGCCATC +
Preference number: 3 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYPHPNR*LPSIAI
Trigger: GATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR TCA 72 bp CACTCAAGCACAGGAGGGGTTATGTGCTCTGATCTTTaGAACCAGAGAAGGGAGGAAAAGCCTTATGGAGGT +
Preference number: 3 (lower is better)
Translates to: HSSTGGVMCSDL*NQRREEKPYGG
Trigger: ACCTCCATAAGGCTTTTCCTCCCTTCTCTGGTTTCAAAGATCAGAGCACATAACCCCTCCTGTGCTTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR TCA 72 bp TGTCTTAACATTGTACATTCGGGGCCTAGCTGCCCTTaGGGATGTCCTAGTTACACCCTCTCTGATACCTGT +
Preference number: 3 (lower is better)
Translates to: CLNIVHSGPSCP*GCPSYTLSDTC
Trigger: ACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGCTAGGCCCCGAATGTACAATGTTAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACCCACCAGTCCCACCTaGAGGGGTGCCCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRPTSPT*RGAPSQ
Trigger: CTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp CTTGGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGCATGGGCACCTGGGCTaGCATGCGGCCAATCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGCSHRVAKPLTCLISHRHGHLG*HAANQD
Trigger: GTCCTGATTGGCCGCATGTCAGCCCAGGTGCCCATG...CCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGCTCACGTCCCGCTCTaGCCCGTGACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRAHVPL*PVTSLH
Trigger: GTGGAGGGACGTCACGGGGCAGAGCGGGACGTGAGC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp CGGGATGCCCACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGTCCTCGGTGATCCCTaGGGTCACCACGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RDAHLQLSLPHQGDVDAVVLGDP*GHHAGP
Trigger: AGGGCCGGCGTGGTGACCCCAGGGATCACCGAGGAC...AACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTGGGCATCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR TCA 90 bp GATGCCCACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCACAGCTGGTCCTCGGTaGTCCCTGGGGTCACCACGC +
Preference number: 4 (lower is better)
Translates to: DAHLQLSLPHQGDVDAVGTAGPR*SLGSPR
Trigger: GCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGT...GCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTGGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp GGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCACCTGGGCTGACATaGGGCCAATCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: GCSHRVAKPLTCLISHRDAPGLT*GQSGPP
Trigger: AGGTGGTCCTGATTGGCCGCATGTCAGCCCAGGTGC...ATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCCATCAGCCACCGGGATaGCCACCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCHQPPG*PPAALS
Trigger: AGAGAGAGCTGCAGGTGGGCATCCCGGTGGCTGATG...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGCCGCGCCCACCCGGTaGGCACGGGGATTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREAAPTR*ARGLAE
Trigger: TTCTGCCAATCCCCGTGCCCACCGGGTGGGCGCGGC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGTCCTCGGTGATCCCTaGGGTCACCACGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCVLGDP*GHHAGP
Trigger: AGGGCCGGCGTGGTGACCCCAGGGATCACCGAGGAC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACATGGGCACCTGGGCTaGCATGCGGCCAATCAGGAC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRHGHLG*HAANQD
Trigger: GTCCTGATTGGCCGCATGTCAGCCCAGGTGCCCATG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGGAGGGGACAGAGGCTaGCCCTCCTCAAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRGGDRG*PSSKPL
Trigger: AAGGGGCTTTGAGGAGGGTCAGCCTCTGTCCCCTCC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGATGCAGTTGGCAGCTaGCACTGCTGCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GCSHRVAKPLTCLISHRDDAVGS*HCCKGH
Trigger: GTGCCCTTTGCAGCAGTGGCAGCTGCCAACTGCATC...ATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGATTGGCCCTCCACAGCTaGTCCTCGGTGATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRLALHS*SSVIPG
Trigger: CCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAA...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp CACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCTTGGCCCTCCACAGCTaGTCCTCGGTGATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HLQLSLPHQGDVDAVGSCLALHS*SSVIPG
Trigger: CCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAA...GCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCCCACAGCTCCAGTGGTaGCACTCACATAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCPQLQW*HSHRLS
Trigger: GGACAGCCTATGTGAGTGCCACCACTGGAGCTGTGG...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACGCTGTCAAGTAGGGTaGTGGGGGAGACAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRRCQVG*WGRQRG
Trigger: CCCTCGCTGTCTCCCCCACCACCCTACTTGACAGCG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGACGCTCGGCTGTCCCTaGCGCCTAAGGGAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRETLGCP*RLREVP
Trigger: CGGCACCTCCCTTAGGCGCCAGGGACAGCCGAGCGT...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393459.5
3UTR CAA 72 bp GGTCCCTCCCCCACCCTAATAGGTTGCTACCCTCAATaGCCATCTGCCCACCAAGGCCCCTGCCCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GPSPTLIGCYPQ*PSAHQGPCPVL
Trigger: TAGCACTGGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGGGAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR CAA 72 bp CCCACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTaGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTCSSLCLIRGM*MQLAAATAAKG
Trigger: GCCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR TCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGTCCCGCTCTGCCCCGTaGCGTCCCTCCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKSRSAP*RPSTEA
Trigger: GGCCTCCGTGGAGGGACGTCACGGGGCAGAGCGGGA...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGCGGGACGTCACGCGTaGCGCCGACCAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGAGRHA*RRPAGR
Trigger: CCTCCCTGCTGGTCGGCGTCACGCGTGACGTCCCGC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACCAGCTGCCTCACAGTaGTGGGAGTGTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRPAASQ*WECHHC
Trigger: GCAGTGGTGACACTCCCATCACTGTGAGGCAGCTGG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp CACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCCAGCTGCCTCACAGTaGTGGGAGTGTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: HLQLSLPHQGDVDAVGSCPAASQ*WECHHC
Trigger: GCAGTGGTGACACTCCCATCACTGTGAGGCAGCTGG...GCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCACCTGCAGCTCTCTCTaGCTCATCAGGGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCTCSSL*LIRGML
Trigger: CAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGT...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp CTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACACCGGGATGCCCACCTaGAGCTCTCTCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LQLSLPHQGDVDAVGSCHTGMPT*SSLCLI
Trigger: GATGAGGCAGAGAGAGCTGCAGGTGGGCATCCCGGT...GTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp CTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGGCCAAGCCTCTGACCTaGCTCATCAGCCACCGGGAT +
Preference number: 4 (lower is better)
Translates to: LPHQGDVDAVGSCHCCKGAKPLT*LISHRD
Trigger: ATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGC...CCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCCCCAGGAAAGTACTTTaGTCCCAGCGAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCPRKVL*SQRGSW
Trigger: CCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGG...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCATGTTCATGGGCACCTaGGCTGACATGCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCMFMGT*ADMRPI
Trigger: GATTGGCCGCATGTCAGCCCAGGTGCCCATGAACAT...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR TCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCCCAGCTGCCTCACAGTaGTGGGAGTGTCACCACTGC +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCPAASQ*WECHHC
Trigger: GCAGTGGTGACACTCCCATCACTGTGAGGCAGCTGG...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp CTTGGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGTTGGCAGCTGCCACTaGTGCAAAGGGCACAAATCT +
Preference number: 4 (lower is better)
Translates to: LGCSHRVAKPLTCLISHRVGSCH*CKGHKS
Trigger: AGATTTGTGCCCTTTGCAGCAGTGGCAGCTGCCAAC...CCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGATGCAGTTGGCAGCTaGCACTGCTGCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRDAVGS*HCCKGH
Trigger: GTGCCCTTTGCAGCAGTGGCAGCTGCCAACTGCATC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCACCGGGATGCCCACCTaGAGCTCTCTCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCTGMPT*SSLCLI
Trigger: GATGAGGCAGAGAGAGCTGCAGGTGGGCATCCCGGT...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCCCTCAATTGCCATCTaGCCACCAAGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREPSIAI*PPRPLP
Trigger: GGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGATGGCACTGAGGGATaGATAAGTCCCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRDGTEG*ISPLPP
Trigger: GGGAGGCAGGGGACTTATGCATCCCTCAGTGCCATC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGAACTCCCAAGGCTGTaGCTGAAGATGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRELPRL*LKMPTL
Trigger: CAGCGTGGGCATCTTCAGGCACAGCCTTGGGAGTTC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGGCCGCGCCCACCCGGTaGGCACGGGGATTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKAAPTR*ARGLAE
Trigger: TTCTGCCAATCCCCGTGCCCACCGGGTGGGCGCGGC...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGATGGCCACAGCTCCAGTaGTGGCACTCACATAGGCTG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRWPQLQ*WHSHRL
Trigger: CAGCCTATGTGAGTGCCACCACTGGAGCTGTGGCCA...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp CACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCTGGCCACAGCTCCAGTaGTGGCACTCACATAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLQLSLPHQGDVDAVGSCWPQLQ*WHSHRL
Trigger: CAGCCTATGTGAGTGCCACCACTGGAGCTGTGGCCA...GCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGTCACACCTGTAGCCTaGCTGGCAGGCAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCVTPVA*LAGRWT
Trigger: TGTCCACCTGCCTGCCAGCCAGGCTACAGGTGTGAC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGTGGGAGGGTGGAGGTaGGGACAGGACCAACCCTCA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREVGGWR*GQDQPS
Trigger: TGAGGGTTGGTCCTGTCCCCACCTCCACCCTCCCAC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATTCCCGCTCTGCCCCGTaGCGTCCCTCCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYSRSAP*RPSTEA
Trigger: GGCCTCCGTGGAGGGACGTCACGGGGCAGAGCGGGA...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp CGGGATGCCCACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTTCATCAGGGGGATGTTaGTGCAGTTGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RDAHLQLSLPHQGDVDAVSSGGC*CSWQLP
Trigger: TGGCAGCTGCCAACTGCATCAACATCCCCCTGATGA...AACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTGGGCATCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCAAAAGTGCCGGGCTCTaGCCAGGAAAGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCKSAGL*PGKYFG
Trigger: ACCAAAGTACTTTCCTGGGCAGAGCCCGGCACTTTT...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCGTAACAGTGAAAAAGTaGCGGGCTCTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCVTVKK*RALPRK
Trigger: TTTCCTGGGCAGAGCCCGGCACTTTTTCACTGTTAC...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp TGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGCAGAAGCTTCCAGCTGTaGCCCGGACAGCAGCAGATT +
Preference number: 4 (lower is better)
Translates to: CLIRGMLMQLAAATAAKGRSFQL*PGQQQI
Trigger: AATCTGCTGCTGTCCGGGGCACAGCTGGAAGCTTCT...GCCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGCACCTGGGCTGACATaGGGCCAATCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREAPGLT*GQSGPP
Trigger: AGGTGGTCCTGATTGGCCGCATGTCAGCCCAGGTGC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAACCTGCAGCTCTCTCTaGCTCATCAGGGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRTCSSL*LIRGML
Trigger: CAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGT...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp CTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGGATTCCCTGCTTGGCTaGAGTCACCGAGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPHQGDVDAVGSCHCCKGDSLLG*SHRVAK
Trigger: CTTGGCTACTCGGTGACTGCAGCCAAGCAGGGAATC...CCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGTTGCTACCCTCAATTaGCATCTGCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRVATLN*HLPTKA
Trigger: GGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAAC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGAACTCCCAAGGCTGTaGCTGAAGATGCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCELPRL*LKMPTL
Trigger: CAGCGTGGGCATCTTCAGGCACAGCCTTGGGAGTTC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp CACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCTCCCCTGTGTCCGGATaGAAGGCGGAGTCATACACA +
Preference number: 4 (lower is better)
Translates to: HLQLSLPHQGDVDAVGSCSPVSG*KAESYT
Trigger: TGTGTATGACTCCGCCTTCCATCCGGACACAGGGGA...GCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAATGTTCATGGGCACCTaGGCTGACATGCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRMFMGT*ADMRPI
Trigger: GATTGGCCGCATGTCAGCCCAGGTGCCCATGAACAT...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GATGCCCACCTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCGGAAGATTCCCTGCTTaGCTGCAGTCACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: DAHLQLSLPHQGDVDAVGGRFPA*LQSPSS
Trigger: GCTACTCGGTGACTGCAGCCAAGCAGGGAATCTTCC...GCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGTGGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGTGGTGGGATGGCCATaGCAGGAATCGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCVVGWP*QESPCR
Trigger: TCTGCATGGCGATTCCTGCCATGGCCATCCCACCAC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGTCACACCTGTAGCCTaGCTGGCAGGCAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREVTPVA*LAGRWT
Trigger: TGTCCACCTGCCTGCCAGCCAGGCTACAGGTGTGAC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGACAGCTGGTCCTCGGTaGTCCCTGGGGTCACCACGC +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKTAGPR*SLGSPR
Trigger: GCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGT...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGGGCCTAGCTGCCCTTaGGGATGTCCTAGTTACACC +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREGPSCP*GCPSYT
Trigger: GGTGTAACTAGGACATCCTCAAGGGCAGCTAGGCCC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCAGAAGCTTCCAGCTGTaGCCCGGACAGCAGCAGATT +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCRSFQL*PGQQQI
Trigger: AATCTGCTGCTGTCCGGGGCACAGCTGGAAGCTTCT...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCCCACCAGTCCCACCTaGAGGGGTGCCCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYPTSPT*RGAPSQ
Trigger: CTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGGGGGAACAGGAAAATaGTCTCAGAGGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRGGTGK*SQRFPL
Trigger: CAGTGGGAACCTCTGAGAGCATTTTCCTGTTCCCCC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCCACAGCTCCAGTGGTaGCACTCACATAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREPQLQW*HSHRLS
Trigger: GGACAGCCTATGTGAGTGCCACCACTGGAGCTGTGG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGGAGGAAAAGCCTTATaGAGGTCCCTCCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREGGKAL*RSLPHP
Trigger: AGGGTGGGGGAGGGACCTCCATAAGGCTTTTCCTCC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
3UTR CAA 72 bp AAAGCCTTATGGAGGTCCCTCCCCCACCCTAATAGGTaGCTACCCTCAATTGCCATCTGCCCACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KALWRSLPHPNR*LPSIAICPPRP
Trigger: GGGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGGGAGGGACCTCCATAAGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCATGGGCACCTGGGCTaGCATGCGGCCAATCAGGAC +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAHGHLG*HAANQD
Trigger: GTCCTGATTGGCCGCATGTCAGCCCAGGTGCCCATG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTCTCCAGAGTGTCCATaGTCAGTGGTGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRESPECP*SVVGWP
Trigger: TGGCCATCCCACCACTGATCATGGACACTCTGGAGA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCGCTCACGTCCCGCTCTaGCCCGTGACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIAHVPL*PVTSLH
Trigger: GTGGAGGGACGTCACGGGGCAGAGCGGGACGTGAGC...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCCCTCAATTGCCATCTaGCCACCAAGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKPSIAI*PPRPLP
Trigger: GGGCAGGGGCCTTGGTGGGCAGATGGCAATTGAGGG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGGTGGGCACGGGGATTaGCAGAACCCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGGGHGD*QNPATT
Trigger: TGTGGTGGCTGGGTTCTGCCAATCCCCGTGCCCACC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp CTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTCCCAGCGAGGTTCCTaGATGTTGATGTCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LQLSLPHQGDVDAVGSCHSQRGS*MLMSKG
Trigger: GCCTTTAGACATCAACATCCAGGAACCTCGCTGGGA...GTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTTGGCCCTCCACAGCTaGTCCTCGGTGATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCALALHS*SSVIPG
Trigger: CCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGCAGTCATACACATACTTaGCCCTCCACAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: CLIRGMLMQLAAATAAKGSHTHT*PSTAGP
Trigger: AGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACT...GCCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTCCCCTGTGTCCGGATaGAAGGCGGAGTCATACACA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRESPVSG*KAESYT
Trigger: TGTGTATGACTCCGCCTTCCATCCGGACACAGGGGA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACCAGAACACCACGGTTaGGGTCTTCCTGTAGAATGT +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRPEHHG*GLPVEC
Trigger: ACATTCTACAGGAAGACCCCAACCGTGGTGTTCTGG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp CTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGCCAGAACACCACGGTTaGGGTCTTCCTGTAGAATGT +
Preference number: 4 (lower is better)
Translates to: LPHQGDVDAVGSCHCCKGPEHHG*GLPVEC
Trigger: ACATTCTACAGGAAGACCCCAACCGTGGTGTTCTGG...CCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR TCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCTTTCCATCGCTCTCTaGAGCTCTCAGAACCGCCTT +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRELSIAL*SSQNRL
Trigger: AAGGCGGTTCTGAGAGCTTCAGAGAGCGATGGAAAG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCACAGCTGGTCCTCGGTaGTCCCTGGGGTCACCACGC +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEITAGPR*SLGSPR
Trigger: GCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGT...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGGAGGGGACAGAGGCTaGCCCTCCTCAAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHGGDRG*PSSKPL
Trigger: AAGGGGCTTTGAGGAGGGTCAGCCTCTGTCCCCTCC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGGCACCTGGGCTGACATaGGGCCAATCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKAPGLT*GQSGPP
Trigger: AGGTGGTCCTGATTGGCCGCATGTCAGCCCAGGTGC...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCACCGGGATGCCCACCTaGAGCTCTCTCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCATGMPT*SSLCLI
Trigger: GATGAGGCAGAGAGAGCTGCAGGTGGGCATCCCGGT...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCATCAGCCACCGGGATaGCCACCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAHQPPG*PPAALS
Trigger: AGAGAGAGCTGCAGGTGGGCATCCCGGTGGCTGATG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGCTCTGGTTCCAGGTTaGTTATGTGTATGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRALVPG*LCVWSS
Trigger: AGAGCTCCATACACATAAGCAACCTGGAACCAGAGC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGGGGGAACAGGAAAATaGTCTCAGAGGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREGGTGK*SQRFPL
Trigger: CAGTGGGAACCTCTGAGAGCATTTTCCTGTTCCCCC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATAGGAGCCCCGGTAGCTaGCTCGGCTCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHRSPGS*LGSEKR
Trigger: CCTCTTCTCTGAGCCGAGCCAGCTACCGGGGCTCCT...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCAGTCATACACATACTTaGCCCTCCACAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCSHTHT*PSTAGP
Trigger: AGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACT...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGTGTCAAGTAGGGTGGTaGGGGAGACAGCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGCQVGW*GRQRGQ
Trigger: CTGCCCTCGCTGTCTCCCCCACCACCCTACTTGACA...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTGTCAAGTAGGGTGGTaGGGGAGACAGCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCACQVGW*GRQRGQ
Trigger: CTGCCCTCGCTGTCTCCCCCACCACCCTACTTGACA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTGGGAGGGGGTGCAGTaGAAGCTCTTAAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREWEGVQ*KLLKGN
Trigger: ATTCCCCTTTAAGAGCTTCCACTGCACCCCCTCCCA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTACCGCTGTGTCCCTTaGGAGGGGGTGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAYRCVP*EGVQWK
Trigger: CTTCCACTGCACCCCCTCCCAAGGGACACAGCGGTA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCACAGATGTTATCACTaGGGGCGGTTGATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREHRCYH*GRLIGG
Trigger: TCCCCCTATCAACCGCCCCCAGTGATAACATCTGTG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCCTAAATTTGCGGAATaGGCTAGGGCGTCAGAACCA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREPKFAE*ARASEP
Trigger: TGGTTCTGACGCCCTAGCTCATTCCGCAAATTTAGG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp CTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACGAGGTTCCTGGATGTTaGTGTCTAAAGGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: LQLSLPHQGDVDAVGSCHEVPGC*CLKAIH
Trigger: GTGAATTGCCTTTAGACATCAACATCCAGGAACCTC...GTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR TCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGATTTGGACTAGCCACTaGTGCCCGGGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGIWTSH*CPGPSS
Trigger: AGAGGAAGGGCCCGGGCATCAGTGGCTAGTCCAAAT...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCATTTGGACTAGCCACTaGTGCCCGGGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAIWTSH*CPGPSS
Trigger: AGAGGAAGGGCCCGGGCATCAGTGGCTAGTCCAAAT...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGGTAAAGAACTCCGCTaGCCGGGACCAGGTAACGCT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAGKELR*PGPGNA
Trigger: AGCGTTACCTGGTCCCGGGCAGCGGAGTTCTTTACC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCACACAGAGCACGCCTaGAGCAAACTCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAHTEHA*SKLRLT
Trigger: CGTGAGCCTGAGTTTGCTGCAGGCGTGCTCTGTGTG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGATGCAGTTGGCAGCTaGCACTGCTGCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGDAVGS*HCCKGH
Trigger: GTGCCCTTTGCAGCAGTGGCAGCTGCCAACTGCATC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGCCAAGCCTCTGACCTaGCTCATCAGCCACCGGGAT +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHAKPLT*LISHRD
Trigger: ATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGATGGCACTGAGGGATaGATAAGTCCCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCADGTEG*ISPLPP
Trigger: GGGAGGCAGGGGACTTATGCATCCCTCAGTGCCATC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGATTAAAGGGGAATGCTTaGTCTGCCTCTGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRLKGNA*SASVAF
Trigger: AAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAA...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGGCTCAGAGAAGAGGTaGTTCGAGCCGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHGSEKR*FEPEGN
Trigger: GTTCCCCTCCGGCTCGAACCACCTCTTCTCTGAGCC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCAGGAGCCCCGGTAGCTaGCTCGGCTCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIRSPGS*LGSEKR
Trigger: CCTCTTCTCTGAGCCGAGCCAGCTACCGGGGCTCCT...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGAGTCATACACATACTTaGCCCTCCACAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRESHTHT*PSTAGP
Trigger: AGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACT...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCCACAGCTCCAGTGGTaGCACTCACATAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKPQLQW*HSHRLS
Trigger: GGACAGCCTATGTGAGTGCCACCACTGGAGCTGTGG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGTGGTGGGATGGCCATaGCAGGAATCGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGVVGWP*QESPCR
Trigger: TCTGCATGGCGATTCCTGCCATGGCCATCCCACCAC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGGAGGAAAAGCCTTATaGAGGTCCCTCCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAGGKAL*RSLPHP
Trigger: AGGGTGGGGGAGGGACCTCCATAAGGCTTTTCCTCC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCGCTGTCAAGTAGGGTaGTGGGGGAGACAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYRCQVG*WGRQRG
Trigger: CCCTCGCTGTCTCCCCCACCACCCTACTTGACAGCG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCGTGGGAGGGTGGAGGTaGGGACAGGACCAACCCTCA +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIVGGWR*GQDQPS
Trigger: TGAGGGTTGGTCCTGTCCCCACCTCCACCCTCCCAC...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGTCATCAGGGGGATGTTaGTGCAGTTGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGSSGGC*CSWQLP
Trigger: TGGCAGCTGCCAACTGCATCAACATCCCCCTGATGA...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTCATCAGGGGGATGTTaGTGCAGTTGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCASSGGC*CSWQLP
Trigger: TGGCAGCTGCCAACTGCATCAACATCCCCCTGATGA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGGGCCTAGCTGCCCTTaGGGATGTCCTAGTTACACC +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHGPSCP*GCPSYT
Trigger: GGTGTAACTAGGACATCCTCAAGGGCAGCTAGGCCC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCTCTAACTACACTCTGTaGACTTACCACCACCCATTC +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCSNYTL*TYHHPF
Trigger: GAATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGA...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCTCAGAGGTTCCCACTaGAGCCCTTTCATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCALRGSH*SPFICP
Trigger: AGGGCAGATGAAAGGGCTTCAGTGGGAACCTCTGAG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGGTAAAGAACTCCGCTaGCCGGGACCAGGTAACGCT +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHGKELR*PGPGNA
Trigger: AGCGTTACCTGGTCCCGGGCAGCGGAGTTCTTTACC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAGCAATTCACCCATTTTaGTTTCCATCGCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRAIHPF*FPSLSE
Trigger: TTCAGAGAGCGATGGAAAGCAAAATGGGTGAATTGC...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGAGAAGCTTCCAGCTGTaGCCCGGACAGCAGCAGATT +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGRSFQL*PGQQQI
Trigger: AATCTGCTGCTGTCCGGGGCACAGCTGGAAGCTTCT...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCACCTGCAGCTCTCTCTaGCTCATCAGGGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCATCSSL*LIRGML
Trigger: CAACATCCCCCTGATGAGGCAGAGAGAGCTGCAGGT...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCATCAGCCACCGGGATaGCCACCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYHQPPG*PPAALS
Trigger: AGAGAGAGCTGCAGGTGGGCATCCCGGTGGCTGATG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGATTCCCTGCTTGGCTaGAGTCACCGAGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCADSLLG*SHRVAK
Trigger: CTTGGCTACTCGGTGACTGCAGCCAAGCAGGGAATC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCTGGCAGGAATCGCCATaGAGATTCTTGAAATCACCA +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCWQESP*RFLKSP
Trigger: TGGTGATTTCAAGAATCTGCATGGCGATTCCTGCCA...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGTTGCTACCCTCAATTaGCATCTGCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAVATLN*HLPTKA
Trigger: GGCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAAC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCATACTAGGCTAGCATaGCTGCTTCTAGCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREHTRLA*LLLAFR
Trigger: CCTGAAAGCTAGAAGCAGGCATGCTAGCCTAGTATG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGGCTCAGAGAAGAGGTaGTTCGAGCCGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYGSEKR*FEPEGN
Trigger: GTTCCCCTCCGGCTCGAACCACCTCTTCTCTGAGCC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGCCCAGGAAAGTACTTTaGTCCCAGCGAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGPRKVL*SQRGSW
Trigger: CCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGG...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGATGTTCATGGGCACCTaGGCTGACATGCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGMFMGT*ADMRPI
Trigger: GATTGGCCGCATGTCAGCCCAGGTGCCCATGAACAT...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGGGAAGATTCCCTGCTTaGCTGCAGTCACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKGRFPA*LQSPSS
Trigger: GCTACTCGGTGACTGCAGCCAAGCAGGGAATCTTCC...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATTACCGCTGTGTCCCTTaGGAGGGGGTGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYYRCVP*EGVQWK
Trigger: CTTCCACTGCACCCCCTCCCAAGGGACACAGCGGTA...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTCTAAGAAATGTCAGTaGAACAGGCTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRESKKCQ*NRLGTV
Trigger: CACTGTGCCCAGCCTGTTCCACTGACATTTCTTAGA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCAGAGGTCATGGGAGTTaGGATCTAACTACACTCTGT +
Preference number: 4 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCRGHGS*DLTTLC
Trigger: ACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGATGTGCTCTGATCTTTaGAACCAGAGAAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREMCSDL*NQRREE
Trigger: TTCCTCCCTTCTCTGGTTTCAAAGATCAGAGCACAT...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGTACAAGGGATGGCACTaGGGGATGCATAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKYKGWH*GMHKSP
Trigger: AGGGGACTTATGCATCCCTCAGTGCCATCCCTTGTA...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTGGCAGGAATCGCCATaGAGATTCTTGAAATCACCA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREWQESP*RFLKSP
Trigger: TGGTGATTTCAAGAATCTGCATGGCGATTCCTGCCA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCTGGCCACAGCTCCAGTaGTGGCACTCACATAGGCTG +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIWPQLQ*WHSHRL
Trigger: CAGCCTATGTGAGTGCCACCACTGGAGCTGTGGCCA...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGGAAGATTCCCTGCTTaGCTGCAGTCACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHGRFPA*LQSPSS
Trigger: GCTACTCGGTGACTGCAGCCAAGCAGGGAATCTTCC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGGTCCATGATCAGTGGTaGGATGGCCATGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKVHDQW*DGHGRN
Trigger: ATTCCTGCCATGGCCATCCCACCACTGATCATGGAC...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGCACAGATGTTATCACTaGGGGCGGTTGATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGHRCYH*GRLIGG
Trigger: TCCCCCTATCAACCGCCCCCAGTGATAACATCTGTG...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCTCTCCAGAGTGTCCATaGTCAGTGGTGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEISPECP*SVVGWP
Trigger: TGGCCATCCCACCACTGATCATGGACACTCTGGAGA...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCCTCAGAGGTTCCCACTaGAGCCCTTTCATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEILRGSH*SPFICP
Trigger: AGGGCAGATGAAAGGGCTTCAGTGGGAACCTCTGAG...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGCAATTCACCCATTTTaGTTTCCATCGCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREAIHPF*FPSLSE
Trigger: TTCAGAGAGCGATGGAAAGCAAAATGGGTGAATTGC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCAAAAGTGCCGGGCTCTaGCCAGGAAAGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAKSAGL*PGKYFG
Trigger: ACCAAAGTACTTTCCTGGGCAGAGCCCGGCACTTTT...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGGTAACAGTGAAAAAGTaGCGGGCTCTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKVTVKK*RALPRK
Trigger: TTTCCTGGGCAGAGCCCGGCACTTTTTCACTGTTAC...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGTAACAGTGAAAAAGTaGCGGGCTCTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGVTVKK*RALPRK
Trigger: TTTCCTGGGCAGAGCCCGGCACTTTTTCACTGTTAC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGTTGGCAGCTGCCACTaGTGCAAAGGGCACAAATCT +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHVGSCH*CKGHKS
Trigger: AGATTTGTGCCCTTTGCAGCAGTGGCAGCTGCCAAC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGATTCCCTGCTTGGCTaGAGTCACCGAGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYDSLLG*SHRVAK
Trigger: CTTGGCTACTCGGTGACTGCAGCCAAGCAGGGAATC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTCCCAGCGAGGTTCCTaGATGTTGATGTCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCASQRGS*MLMSKG
Trigger: GCCTTTAGACATCAACATCCAGGAACCTCGCTGGGA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCCCCAGGAAAGTACTTTaGTCCCAGCGAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIPRKVL*SQRGSW
Trigger: CCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGG...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCTCCCCTGTGTCCGGATaGAAGGCGGAGTCATACACA +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEISPVSG*KAESYT
Trigger: TGTGTATGACTCCGCCTTCCATCCGGACACAGGGGA...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCCAGAACACCACGGTTaGGGTCTTCCTGTAGAATGT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKPEHHG*GLPVEC
Trigger: ACATTCTACAGGAAGACCCCAACCGTGGTGTTCTGG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAGTGTCCATGATCAGTaGTGGGATGGCCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYSVHDQ*WDGHGR
Trigger: CCTGCCATGGCCATCCCACCACTGATCATGGACACT...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATTGTATGGAGCTCTTCTaGGGGAATAGGGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHCMELF*GNRAQH
Trigger: GTGCTGTGCCCTATTCCCCCAGAAGAGCTCCATACA...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGATTATTGAGTAATGGCTaGCTTCACAGATGTTATCAC +
Preference number: 4 (lower is better)
Translates to: VGETARAVQDTGTPLSGRLLSNG*LHRCYH
Trigger: GTGATAACATCTGTGAAGCCAGCCATTACTCAATAA...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCCTAAATTTGCGGAATaGGCTAGGGCGTCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHPKFAE*ARASEP
Trigger: TGGTTCTGACGCCCTAGCTCATTCCGCAAATTTAGG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGTTGGCAGCTGCCACTaGTGCAAAGGGCACAAATCT +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYVGSCH*CKGHKS
Trigger: AGATTTGTGCCCTTTGCAGCAGTGGCAGCTGCCAAC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGGCTCTGGTTCCAGGTTaGTTATGTGTATGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKALVPG*LCVWSS
Trigger: AGAGCTCCATACACATAAGCAACCTGGAACCAGAGC...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCCCACCCTAATAGGTTaGTACCCTCAATTGCCATCT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKPTLIG*YPQLPS
Trigger: AGATGGCAATTGAGGGTAGCAACCTATTAGGGTGGG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCTTGAAATCACCACCTaGAAGATTCCCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKLEITT*KIPCLA
Trigger: AGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGTCCATGATCAGTGGTaGGATGGCCATGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYVHDQW*DGHGRN
Trigger: ATTCCTGCCATGGCCATCCCACCACTGATCATGGAC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATTGTATGGAGCTCTTCTaGGGGAATAGGGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYCMELF*GNRAQH
Trigger: GTGCTGTGCCCTATTCCCCCAGAAGAGCTCCATACA...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCTGAGCTCTCAGCTCTaGTTCCAGGTTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHLSSQL*FQVAYV
Trigger: CACATAAGCAACCTGGAACCAGAGCTGAGAGCTCAG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGAGACCACTTCAACGCTaGGGTTTTGCTCATGGATCT +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGRPLQR*GFAHGS
Trigger: AGATCCATGAGCAAAACCCCAGCGTTGAAGTGGTCT...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGAGGAGGAGGGGAAATaGAGCTATTCCAGGATACAA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGEEEGK*SYSRIQ
Trigger: TTGTATCCTGGAATAGCTCCATTTCCCCTCCTCCTC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCTGGGAGGGGGTGCAGTaGAAGCTCTTAAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIWEGVQ*KLLKGN
Trigger: ATTCCCCTTTAAGAGCTTCCACTGCACCCCCTCCCA...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTCTAAGAAATGTCAGTaGAACAGGCTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCASKKCQ*NRLGTV
Trigger: CACTGTGCCCAGCCTGTTCCACTGACATTTCTTAGA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGAGGTTCCTGGATGTTaGTGTCTAAAGGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGEVPGC*CLKAIH
Trigger: GTGAATTGCCTTTAGACATCAACATCCAGGAACCTC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGATGTGCTCTGATCTTTaGAACCAGAGAAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VEALKGECLLCLCGFLFGMCSDL*NQRREE
Trigger: TTCCTCCCTTCTCTGGTTTCAAAGATCAGAGCACAT...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTTAAAGGGGAATGCTTaGTCTGCCTCTGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCALKGNA*SASVAF
Trigger: AAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCTCCCAGCGAGGTTCCTaGATGTTGATGTCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEISQRGS*MLMSKG
Trigger: GCCTTTAGACATCAACATCCAGGAACCTCGCTGGGA...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCTTGAAATCACCACCTaGAAGATTCCCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHLEITT*KIPCLA
Trigger: AGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCGGTTGCTTATGTGTATaGAGCTCTTCTGGGGGAATA +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAGCLCV*SSSGGI
Trigger: TATTCCCCCAGAAGAGCTCCATACACATAAGCAACC...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCTGAGCTCTCAGCTCTaGTTCCAGGTTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYLSSQL*FQVAYV
Trigger: CACATAAGCAACCTGGAACCAGAGCTGAGAGCTCAG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATAGACCACTTCAACGCTaGGGTTTTGCTCATGGATCT +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHRPLQR*GFAHGS
Trigger: AGATCCATGAGCAAAACCCCAGCGTTGAAGTGGTCT...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGGGGAATGCTTGCTCTaGCTCTGTGGCTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYGECLL*LCGFLF
Trigger: AAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGGTTGCTTATGTGTATaGAGCTCTTCTGGGGGAATA +
Preference number: 4 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHGCLCV*SSSGGI
Trigger: TATTCCCCCAGAAGAGCTCCATACACATAAGCAACC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCAAGTTTGCAGTTTATTaGGTAATGGCTGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAKFAVY*VMAGFT
Trigger: TGTGAAGCCAGCCATTACTCAATAAACTGCAAACTT...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCTGTGGCTTTTTGTTTaGGAAAGGGAGTTGGGATTG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYLWLFV*ERELGL
Trigger: CAATCCCAACTCCCTTTCCCAAACAAAAAGCCACAG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCAGAGGTCATGGGAGTTaGGATCTAACTACACTCTGT +
Preference number: 4 (lower is better)
Translates to: KDSARFVLLVSISLCPEIRGHGS*DLTTLC
Trigger: ACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR TCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTTTGCAGTTTATTaGGTAATGGCTGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYKFAVY*VMAGFT
Trigger: TGTGAAGCCAGCCATTACTCAATAAACTGCAAACTT...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR GCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATTATCATGTATGTATATaGATGGACACTCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYYHVCI*MDTQAQ
Trigger: CTGTGCTTGAGTGTCCATGCATATACATACATGATA...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CCA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATTTATTGAGTAATGGCTaGCTTCACAGATGTTATCAC +
Preference number: 4 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYLLSNG*LHRCYH
Trigger: GTGATAACATCTGTGAAGCCAGCCATTACTCAATAA...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 90 bp CTGTCGCCGCCGGGCCCTCCCAGCCATCACGCGGGACGTCACGCGTaGCGCCGACCAGCAGGGAGGGGCAGGAGCTTCCCGGCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: LSPPGPPSHHAGRHA*RRPAGRGRSFPAAP
Trigger: GGGCGCGGCCGGGAAGCTCCTGCCCCTCCCTGCTGGTCGGCGTCACGCGTGACGTCCCGCGTGATGGCTGGGAGGGCCCGGCGGCGACAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 90 bp CCACACAGAGCACGCCTGCAGCAAACTCAGGCTCACGTCCCGCTCTaGCCCGTGACGTCCCTCCACGGAGGCCTCAAGGGTGCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PHRARLQQTQAHVPL*PVTSLHGGLKGAQG
Trigger: TCCCTGGGCACCCTTGAGGCCTCCGTGGAGGGACGTCACGGGGCAGAGCGGGACGTGAGCCTGAGTTTGCTGCAGGCGTGCTCTGTGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACGGTGGGCACGGGGATaGGCAGAACCCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: VGETARAVQDTGTPLSGRRWARG*AEPSHH
Trigger: GTGGTGGCTGGGTTCTGCCAATCCCCGTGCCCACCG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 90 bp CACTCCAGCCAGGCCTGTCTGCTGATCACCCTCCCCGGCATCCCATaGCCTCTCACCTCTCAGAATTGGTTGCCATGGCACTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HSSQACLLITLPGIP*PLTSQNWLPWHSLA
Trigger: GGCCAGGGAGTGCCATGGCAACCAATTCTGAGAGGTGAGAGGTCATGGGATGCCGGGGAGGGTGATCAGCAGACAGGCCTGGCTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS TCA 90 bp AGGCGGAGTCATACACATACTTGGCCCTCCACAGCTGGTCCTCGGTaGTCCCTGGGGTCACCACGCCGGCCCTGTAGTTCTGCACGATGT +
Preference number: 5 (lower is better)
Translates to: RRSHTHTWPSTAGPR*SLGSPRRPCSSARC
Trigger: ACATCGTGCAGAACTACAGGGCCGGCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS-3UTR CAA 90 bp CTTGGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGCTCATCAGGGGGATGTaGATGCAGTTGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGCSHRVAKPLTCLISHRLIRGM*MQLAAA
Trigger: GGCAGCTGCCAACTGCATCAACATCCCCCTGATGAG...CCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CAA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACTACCGCTGTGTCCCTaGGGAGGGGGTGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: VGETARAVQDTGTPLSGRLPLCP*GGGAVE
Trigger: TTCCACTGCACCCCCTCCCAAGGGACACAGCGGTAG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp CTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACCTCTTGGTGAGGGATTaGAGTCCCAGGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LQLSLPHQGDVDAVGSCHLLVRD*SPRAVA
Trigger: GGCCACGGCCCTGGGACTCAAATCCCTCACCAAGAG...GTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS TCA 90 bp TTCCCCCACTCCCAGAATCAGTGGAGTGCCTGCCAGGCCTCCTCCTaGACACCCTGGAAGACCCTAGGTCAGCTGGTCCAGAGATGCAGA +
Preference number: 5 (lower is better)
Translates to: FPHSQNQWSACQASS*TPWKTLGQLVQRCR
Trigger: TCTGCATCTCTGGACCAGCTGACCTAGGGTCTTCCAGGGTGTTCAGGAGGAGGCCTGGCAGGCACTCCACTGATTCTGGGAGTGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS CCA 90 bp GGCAATTCCAGGAGCCCCGGTAGCTGGCTCGGCTCAGAGAAGAGGTaGTTCGAGCCGGAGGGGAACAAGCCAGACCCAAGCCCTAAATTT +
Preference number: 5 (lower is better)
Translates to: GNSRSPGSWLGSEKR*FEPEGNKPDPSPKF
Trigger: AAATTTAGGGCTTGGGTCTGGCTTGTTCCCCTCCGGCTCGAACCACCTCTTCTCTGAGCCGAGCCAGCTACCGGGGCTCCTGGAATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 90 bp GCTGACATGCGGCCAATCAGGACCACCTTCTCCCCTGTGTCCGGATaGAAGGCGGAGTCATACACATACTTGGCCCTCCACAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: ADMRPIRTTFSPVSG*KAESYTYLALHSWS
Trigger: GGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTCCGCCTTCCATCCGGACACAGGGGAGAAGGTGGTCCTGATTGGCCGCATGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS-3UTR CAA 90 bp CTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAGCCACCGGGATGCGAGTCATACACATACTaGGCCCTCCACAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LQSPSSQASDLPHQPPGCESYTY*ALHSWS
Trigger: GGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTC...GCATCCCGGTGGCTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CAA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCTGCTTGGTGAGGGATTaGAGTCCCAGGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCCLVRD*SPRAVA
Trigger: GGCCACGGCCCTGGGACTCAAATCCCTCACCAAGCA...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp CTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGTGGGGAGGAAGGGTGTaGTTCAGTGGCCCTAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPHQGDVDAVGSCHCCKGWGGRV*FSGPKG
Trigger: GCCCTTAGGGCCACTGAACAACACCCTTCCTCCCCA...CCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS TCA 90 bp CTTGGAGCCCTTAGACCTGTGGCCGTTTTCTTTCTCCCAAGGCAATaGCAGGGCTGGGACCTCCAGATCACGCCCTTCCACTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LGALRPVAVFFLPRQ*QGWDLQITPFHSSQ
Trigger: CTGGCTGGAGTGGAAGGGCGTGATCTGGAGGTCCCAGCCCTGTCATTGCCTTGGGAGAAAGAAAACGGCCACAGGTCTAAGGGCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS-3UTR CAA 90 bp CTGCAGCTCTCTCTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACGCCCAGGAAAGTACTTaGGTCCCAGCGAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LQLSLPHQGDVDAVGSCHAQEST*VPARFL
Trigger: CAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGC...GTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGAGAGCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CAA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTGCTTGGTGAGGGATTaGAGTCCCAGGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRECLVRD*SPRAVA
Trigger: GGCCACGGCCCTGGGACTCAAATCCCTCACCAAGCA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp CTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGGGTGGTGAGGGACTCTaGGTGAGGGATTTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: LPHQGDVDAVGSCHCCKGGGEGL*VRDLSP
Trigger: GGGACTCAAATCCCTCACCAAGAGTCCCTCACCACC...CCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CAA 90 bp CTGCCTCATCAGGGGGATGTTGATGCAGTTGGCAGCTGCCACTGCTGCAAAGGGGCCAGAACACCACGGTaGGGGTCTTCCTGTAGAATG +
Preference number: 5 (lower is better)
Translates to: LPHQGDVDAVGSCHCCKGARTPR*GSSCRM
Trigger: CATTCTACAGGAAGACCCCAACCGTGGTGTTCTGGC...CCCTTTGCAGCAGTGGCAGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489434.3
CDS-3UTR CAA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGGTTGCTACCCTCAATaGCCATCTGCCCACCAAGGC +
Preference number: 5 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCGCYPQ*PSAHQG
Trigger: GCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 90 bp GAGCCGGAGGGGAACAAGCCAGACCCAAGCCCTAAATTTGCGGAATaGGCTAGGGCGTCAGAACCAGAACTGGGGTGGGTAAAGAACTCC +
Preference number: 5 (lower is better)
Translates to: EPEGNKPDPSPKFAE*ARASEPELGWVKNS
Trigger: GGAGTTCTTTACCCACCCCAGTTCTGGTTCTGACGCCCTAGCTCATTCCGCAAATTTAGGGCTTGGGTCTGGCTTGTTCCCCTCCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 90 bp GTGTATGGAGCTGCAATAGAACAGCACAGGCCAGTTAACGTCCCCTaGATCCAACCCCACTCAGGCCCAGGGATTGCCATCCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: VYGAAIEQHRPVNVP*IQPHSGPGIAIPPP
Trigger: AGGAGGTGGGATGGCAATCCCTGGGCCTGAGTGGGGTTGGATTCAGGGGACGTTAACTGGCCTGTGCTGTTCTATTGCAGCTCCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS GCA 90 bp GCCCCGGACAGCAGCAGATTTCGAGGATCAGTAACAGTGAAAAAGTaGCGGGCTCTGCCCAGGAAAGTACTTTGGTCCCAGCGAGGTTCC +
Preference number: 5 (lower is better)
Translates to: APDSSRFRGSVTVKK*RALPRKVLWSQRGS
Trigger: GGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAGAGCCCGGCACTTTTTCACTGTTACTGATCCTCGAAATCTGCTGCTGTCCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS GCA 90 bp CAGCCCAGTTCATTCTTGCTGAATGAACGAAGGTGGAGGAGGCGGTaGAGGGGTCAGGAGAAGGGCTGGCAAGTCTTAGAGAATCAGGCG +
Preference number: 5 (lower is better)
Translates to: QPSSFLLNERRWRRR*RGQEKGWQVLENQA
Trigger: CGCCTGATTCTCTAAGACTTGCCAGCCCTTCTCCTGACCCCTGCACCGCCTCCTCCACCTTCGTTCATTCAGCAAGAATGAACTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465383.5
ENST00000466982.1
ENST00000487721.1
CDS CCA 90 bp GCAAGTCTTAGAGAATCAGGCGAGGCTGGAGAGAGAGTTGGGGCCTaGTCACTTCTCCCAGCCATCGCCCATTCCAGGACAAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: ASLRESGEAGERVGA*SLLPAIAHSRTREV
Trigger: TACCTCTCTTGTCCTGGAATGGGCGATGGCTGGGAGAAGTGACCAGGCCCCAACTCTCTCTCCAGCCTCGCCTGATTCTCTAAGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465383.5
ENST00000466982.1
CDS-3UTR CAA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGAACCCAAGCCCTAAATTaGCGGAATGAGCTAGGGCGT +
Preference number: 5 (lower is better)
Translates to: VGETARAVQDTGTPLSGRTQALN*RNELGR
Trigger: ACGCCCTAGCTCATTCCGCAAATTTAGGGCTTGGGT...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCGGTGGGCACGGGGATaGGCAGAACCCAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHRWARG*AEPSHH
Trigger: GTGGTGGCTGGGTTCTGCCAATCCCCGTGCCCACCG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGAGTCATACACATACTaGGCCCTCCACAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCESYTY*ALHSWS
Trigger: GGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCTCATCAGGGGGATGTaGATGCAGTTGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRELIRGM*MQLAAA
Trigger: GGCAGCTGCCAACTGCATCAACATCCCCCTGATGAG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGGTTGCTACCCTCAATaGCCATCTGCCCACCAAGGC +
Preference number: 5 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREGCYPQ*PSAHQG
Trigger: GCCTTGGTGGGCAGATGGCAATTGAGGGTAGCAACC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCGACACAGGCACTCCTTaGTCTGGTAGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCDTGTP*SGREEE
Trigger: CTCCTCCTCTCTACCAGACAAAGGAGTGCCTGTGTC...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGATATCACTGGGGGCGGTaGATAGGGGGAACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VGETARAVQDTGTPLSGRYHWGR*IGGTGK
Trigger: TTTTCCTGTTCCCCCTATCAACCGCCCCCAGTGATA...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGGCCAGAACACCACGGTaGGGGTCTTCCTGTAGAATG +
Preference number: 5 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREARTPR*GSSCRM
Trigger: CATTCTACAGGAAGACCCCAACCGTGGTGTTCTGGC...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp TACCTGTGGAGTTTAAGCACCATTCCTACCGCTGTGTCCCTTGGGAGGGGGTGCCCCCACCCTAATAGGTaGCTACCCTCAATTGCCATC +
Preference number: 5 (lower is better)
Translates to: YLWSLSTIPTAVSLGRGCPHPNR*LPSIAI
Trigger: GATGGCAATTGAGGGTAGCAACCTATTAGGGTGGGG...GCACCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAACTCCACAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGCTACCGCTGTGTCCCTaGGGAGGGGGTGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKLPLCP*GGGAVE
Trigger: TTCCACTGCACCCCCTCCCAAGGGACACAGCGGTAG...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 90 bp GATCAGTGGTGGGATGGCCATGGCAGGAATCGCCATGCAGATTCTTaGAATCACCACCTGGAAGATTCCCTGCTTGGCTGCAGTCACCGA +
Preference number: 5 (lower is better)
Translates to: DQWWDGHGRNRHADS*NHHLEDSLLGCSHR
Trigger: TCGGTGACTGCAGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAGAATCTGCATGGCGATTCCTGCCATGGCCATCCCACCACTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000465383.5
ENST00000487721.1
CDS GCA 90 bp GCCGGCCCTGTAGTTCTGCACGATGTTCCGAGAAGCTTCCAGCTGTaGCCCGGACAGCAGCAGATTTCGAGGATCAGTAACAGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: AGPVVLHDVPRSFQL*PGQQQISRISNSEK
Trigger: TTTTTCACTGTTACTGATCCTCGAAATCTGCTGCTGTCCGGGGCACAGCTGGAAGCTTCTCGGAACATCGTGCAGAACTACAGGGCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS GCA 90 bp CACTGTCACCCCATTTCACCCACCATAGCTCTATCCCATCAGCCTTaGCTTGGAGCCCTTAGACCTGTGGCCGTTTTCTTTCTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: HCHPISPTIALSHQP*LGALRPVAVFFLPR
Trigger: CCTTGGGAGAAAGAAAACGGCCACAGGTCTAAGGGCTCCAAGGCAAGGCTGATGGGATAGAGCTATGGTGGGTGAAATGGGGTGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS CCA 90 bp TCGCCATGCAGATTCTTGAAATCACCACCTGGAAGATTCCCTGCTTaGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTGCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: SPCRFLKSPPGRFPA*LQSPSSQASDLPHQ
Trigger: CTGATGAGGCAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAGAATCTGCATGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000465383.5
ENST00000487721.1
CDS GCA 90 bp TCAATTTGCTCTGGCCACAGGGACCACCAACCTGTTCCTCAAATGTaGAAGCCCCTCCTACTGCAGTGCCCTTGCACTGACTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: SICSGHRDHQPVPQM*KPLLLQCPCTDCFL
Trigger: CAGAAAACAGTCAGTGCAAGGGCACTGCAGTAGGAGGGGCTTGCACATTTGAGGAACAGGTTGGTGGTCCCTGTGGCCAGAGCAAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS CCA 90 bp CTGACCCTCCTCAAAGCCCCTTGTTGTAGTAGACCACTTCAACGCTaGGGTTTTGCTCATGGATCTGAGCTCTCAGCTCTGGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: LTLLKAPCCSRPLQR*GFAHGSELSALVPG
Trigger: ACCTGGAACCAGAGCTGAGAGCTCAGATCCATGAGCAAAACCCCAGCGTTGAAGTGGTCTACTACAACAAGGGGCTTTGAGGAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000466982.1
ENST00000470252.1
CDS CCA 90 bp CCTTTCCAAGCACATCTCTTCCTCGGCACTCTTCTCAATTTGCTCTaGCCACAGGGACCACCAACCTGTTCCTCAAATGTGCAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: PFQAHLFLGTLLNLL*PQGPPTCSSNVQAP
Trigger: AGGGGCTTGCACATTTGAGGAACAGGTTGGTGGTCCCTGTGGCCAGAGCAAATTGAGAAGAGTGCCGAGGAAGAGATGTGCTTGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS-3UTR CAA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGCTCATCAGGGGGATGTaGATGCAGTTGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VEALKGECLLCLCGFLFGLIRGM*MQLAAA
Trigger: GGCAGCTGCCAACTGCATCAACATCCCCCTGATGAG...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 90 bp CTGACCCTTTCCAAGCACATCTCTTCCTCGGCACTCTTCTCAATTTaGTCTGGCCACAGGGACCACCAACCTGTTCCTCAAATGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LTLSKHISSSALFSI*SGHRDHQPVPQMCK
Trigger: CTTGCACATTTGAGGAACAGGTTGGTGGTCCCTGTGGCCAGAGCAAATTGAGAAGAGTGCCGAGGAAGAGATGTGCTTGGAAAGGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS-3UTR CAA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATGCCCAGGAAAGTACTTaGGTCCCAGCGAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHAQEST*VPARFL
Trigger: CAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGC...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGTTCCCTGTCTTAACATaGTACATTCGGGGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: SGRGDMTPLKQQPKEVREFPVLT*YIRGLA
Trigger: AGCTAGGCCCCGAATGTACAATGTTAAGACAGGGAA...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGGGGAGACAGCGAGGGCAGTACAGGACACAGGCACTCCTTTGTCTGGTAGACAAGTTTGCAGTTTATaGAGTAATGGCTGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: VGETARAVQDTGTPLSGRQVCSL*SNGWLH
Trigger: GTGAAGCCAGCCATTACTCAATAAACTGCAAACTTG...TCTACCAGACAAAGGAGTGCCTGTGTCCTGTACTGCCCTCGCTGTCTCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 90 bp TGCCGGGCTCTGCCCAGGAAAGTACTTTGGTCCCAGCGAGGTTCCTaGATGTTGATGTCTAAAGGCAATTCACCCATTTTGCTTTCCATC +
Preference number: 5 (lower is better)
Translates to: CRALPRKVLWSQRGS*MLMSKGNSPILLSI
Trigger: GATGGAAAGCAAAATGGGTGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAGAGCCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GCTGCCCTTGAGGATGTCCTAGTTACACCCTCTCTGATACCTGTGGAGTTTAAGACCCAAGCCCTAAATTaGCGGAATGAGCTAGGGCGT +
Preference number: 5 (lower is better)
Translates to: AALEDVLVTPSLIPVEFKTQALN*RNELGR
Trigger: ACGCCCTAGCTCATTCCGCAAATTTAGGGCTTGGGT...CTTAAACTCCACAGGTATCAGAGAGGGTGTAACTAGGACATCCTCAAGGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGTGGTAGGGGTGACATGACTCCACTAAAGCAGCAGCCCAAGGAAGTGAGGGAGCGAGGTTCCTGGATGTaGATGTCTAAAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: SGRGDMTPLKQQPKEVRERGSWM*MSKGNS
Trigger: TGAATTGCCTTTAGACATCAACATCCAGGAACCTCG...CTCCCTCACTTCCTTGGGCTGCTGCTTTAGTGGAGTCATGTCACCCCTACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGCCCAGGAAAGTACTTaGGTCCCAGCGAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYAQEST*VPARFL
Trigger: CAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGTATCACTGGGGGCGGTaGATAGGGGGAACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VEALKGECLLCLCGFLFGYHWGR*IGGTGK
Trigger: TTTTCCTGTTCCCCCTATCAACCGCCCCCAGTGATA...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 90 bp CACTTCAACGCTGGGGTTTTGCTCATGGATCTGAGCTCTCAGCTCTaGTTCCAGGTTGCTTATGTGTATGGAGCTGCAATAGAACAGCAC +
Preference number: 5 (lower is better)
Translates to: HFNAGVLLMDLSSQL*FQVAYVYGAAIEQH
Trigger: GTGCTGTTCTATTGCAGCTCCATACACATAAGCAACCTGGAACCAGAGCTGAGAGCTCAGATCCATGAGCAAAACCCCAGCGTTGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS-3UTR CAA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCGAGTCATACACATACTaGGCCCTCCACAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KDSARFVLLVSISLCPEIESYTY*ALHSWS
Trigger: GGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTC...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCGCCAGAACACCACGGTaGGGGTCTTCCTGTAGAATG +
Preference number: 5 (lower is better)
Translates to: KDSARFVLLVSISLCPEIARTPR*GSSCRM
Trigger: CATTCTACAGGAAGACCCCAACCGTGGTGTTCTGGC...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCTTCAACGCTGGGGTTTaGCTCATGGATCTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCAFNAGV*LMDLSS
Trigger: AGAGCTCAGATCCATGAGCAAAACCCCAGCGTTGAA...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATGACACAGGCACTCCTTaGTCTGGTAGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYDTGTP*SGREEE
Trigger: CTCCTCCTCTCTACCAGACAAAGGAGTGCCTGTGTC...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp TTTAGATTTGAGGTCATGATGTCAGAGCACACCAGGAACTCCCAAGGCTGTGCCCTTAAAGGGGAATGCTaGCTCTGCCTCTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: FRFEVMMSEHTRNSQGCALKGEC*LCLCGF
Trigger: AAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAG...GGCACAGCCTTGGGAGTTCCTGGTGTGCTCTGACATCATGACCTCAAATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGCAGAGGTCATGGGAGTaGGGATCTAACTACACTCTG +
Preference number: 5 (lower is better)
Translates to: VEALKGECLLCLCGFLFGQRSWE*GSNYTL
Trigger: CAGAGTGTAGTTAGATCCCAACTCCCATGACCTCTG...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 90 bp CTCTGCCCAGGAAAGTACTTTGGTCCCAGCGAGGTTCCTGGATGTTaGTGTCTAAAGGCAATTCACCCATTTTGCTTTCCATCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LCPGKYFGPSEVPGC*CLKAIHPFCFPSLS
Trigger: AGAGAGCGATGGAAAGCAAAATGGGTGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 90 bp GACTATAAACTTCATGAGGACAGGGGCCATAACCATTGTGTTCAGTaGCATCTCCTCAGCCCTAAAACATGCCTGGTGCATGGCACTCAA +
Preference number: 5 (lower is better)
Translates to: DYKLHEDRGHNHCVQ*HLLSPKTCLVHGTQ
Trigger: TTGAGTGCCATGCACCAGGCATGTTTTAGGGCTGAGGAGATGGCACTGAACACAATGGTTATGGCCCCTGTCCTCATGAAGTTTATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000487721.1
CDS CCA 90 bp TCAGTAACAGTGAAAAAGTGCCGGGCTCTGCCCAGGAAAGTACTTTaGTCCCAGCGAGGTTCCTGGATGTTGATGTCTAAAGGCAATTCA +
Preference number: 5 (lower is better)
Translates to: SVTVKKCRALPRKVL*SQRGSWMLMSKGNS
Trigger: TGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAGAGCCCGGCACTTTTTCACTGTTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS-3UTR CAA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCTTAAAGGGGAATGCTaGCTCTGCCTCTGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHLKGEC*LCLCGF
Trigger: AAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGTTCCCTGTCTTAACATaGTACATTCGGGGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: VEALKGECLLCLCGFLFGFPVLT*YIRGLA
Trigger: AGCTAGGCCCCGAATGTACAATGTTAAGACAGGGAA...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATTTCAACGCTGGGGTTTaGCTCATGGATCTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYFNAGV*LMDLSS
Trigger: AGAGCTCAGATCCATGAGCAAAACCCCAGCGTTGAA...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GTGGAAGCTCTTAAAGGGGAATGCTTGCTCTGCCTCTGTGGCTTTTTGTTTGGGGTTTGGGAAAGGGAGTaGGGATTGGAGGATTTAGAT +
Preference number: 5 (lower is better)
Translates to: VEALKGECLLCLCGFLFGVWERE*GLEDLD
Trigger: ATCTAAATCCTCCAATCCCAACTCCCTTTCCCAAAC...CCCAAACAAAAAGCCACAGAGGCAGAGCAAGCATTCCCCTTTAAGAGCTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp GCTAGGTATCAGAAACCTGAAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATCAGAGGTCATGGGAGTaGGGATCTAACTACACTCTG +
Preference number: 5 (lower is better)
Translates to: ARYQKPEGFSPLCPTSVYQRSWE*GSNYTL
Trigger: CAGAGTGTAGTTAGATCCCAACTCCCATGACCTCTG...ATAGACACTAGTAGGACAAAGCGGGCTGAATCCTTCAGGTTTCTGATACCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATTCTGTGGCTTTTTGTTaGGGAAAGGGAGTTGGGATT +
Preference number: 5 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHSVAFC*GKGVGI
Trigger: AATCCCAACTCCCTTTCCCAAACAAAAAGCCACAGA...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AAGGATTCAGCCCGCTTTGTCCTACTAGTGTCTATAAGTCTCTGTCCTGAGATCTCTGTGGCTTTTTGTTaGGGAAAGGGAGTTGGGATT +
Preference number: 5 (lower is better)
Translates to: KDSARFVLLVSISLCPEISVAFC*GKGVGI
Trigger: AATCCCAACTCCCTTTCCCAAACAAAAAGCCACAGA...GATCTCAGGACAGAGACTTATAGACACTAGTAGGACAAAGCGGGCTGAATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS-3UTR CAA 90 bp AGAGGTCATGGGAGTTGGGATCTAACTACACTCTGTGAACTTACCACCACCCATCAAGTTTGCAGTTTATaGAGTAATGGCTGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: RGHGSWDLTTLCELTTTHQVCSL*SNGWLH
Trigger: GTGAAGCCAGCCATTACTCAATAAACTGCAAACTTG...ATGGGTGGTGGTAAGTTCACAGAGTGTAGTTAGATCCCAACTCCCATGACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 72 bp CCGGGCCCTCCCAGCCATCACGCGGGACGTCACGCGTaGCGCCGACCAGCAGGGAGGGGCAGGAGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: PGPPSHHAGRHA*RRPAGRGRSFP
Trigger: CGGGAAGCTCCTGCCCCTCCCTGCTGGTCGGCGTCACGCGTGACGTCCCGCGTGATGGCTGGGAGGGCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 72 bp GGGAGGGGCAGGAGCTTCCCGGCCGCGCCCACCCGGTaGGCACGGGGATTGGCAGAACCCAGCCACCACACA +
Preference number: 6 (lower is better)
Translates to: GRGRSFPAAPTR*ARGLAEPSHHT
Trigger: TGTGTGGTGGCTGGGTTCTGCCAATCCCCGTGCCCACCGGGTGGGCGCGGCCGGGAAGCTCCTGCCCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 72 bp TGCAGCAAACTCAGGCTCACGTCCCGCTCTGCCCCGTaGCGTCCCTCCACGGAGGCCTCAAGGGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: CSKLRLTSRSAP*RPSTEASRVPR
Trigger: CCTGGGCACCCTTGAGGCCTCCGTGGAGGGACGTCACGGGGCAGAGCGGGACGTGAGCCTGAGTTTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 72 bp GGATTGGCAGAACCCAGCCACCACACAGAGCACGCCTaGAGCAAACTCAGGCTCACGTCCCGCTCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: GLAEPSHHTEHA*SKLRLTSRSAP
Trigger: CGGGGCAGAGCGGGACGTGAGCCTGAGTTTGCTGCAGGCGTGCTCTGTGTGGTGGCTGGGTTCTGCCAATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 72 bp AGGAGCCCCGGTAGCTGGCTCGGCTCAGAGAAGAGGTaGTTCGAGCCGGAGGGGAACAAGCCAGACCCAAGC +
Preference number: 6 (lower is better)
Translates to: RSPGSWLGSEKR*FEPEGNKPDPS
Trigger: GCTTGGGTCTGGCTTGTTCCCCTCCGGCTCGAACCACCTCTTCTCTGAGCCGAGCCAGCTACCGGGGCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 72 bp GTCAGAACCAGAACTGGGGTGGGTAAAGAACTCCGCTaGCCGGGACCAGGTAACGCTCGGCTGTCCCTGGCG +
Preference number: 6 (lower is better)
Translates to: VRTRTGVGKELR*PGPGNARLSLA
Trigger: CGCCAGGGACAGCCGAGCGTTACCTGGTCCCGGGCAGCGGAGTTCTTTACCCACCCCAGTTCTGGTTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 72 bp AAGGCGGAGTCATACACATACTTGGCCCTCCACAGCTaGTCCTCGGTGATCCCTGGGGTCACCACGCCGGCC +
Preference number: 6 (lower is better)
Translates to: KAESYTYLALHS*SSVIPGVTTPA
Trigger: GGCCGGCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS CCA 72 bp ATACTTGGCCCTCCACAGCTGGTCCTCGGTGATCCCTaGGGTCACCACGCCGGCCCTGTAGTTCTGCACGAT +
Preference number: 6 (lower is better)
Translates to: ILGPPQLVLGDP*GHHAGPVVLHD
Trigger: ATCGTGCAGAACTACAGGGCCGGCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAAGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS CAA 90 bp ACCTTCTCCCCTGTGTCCGGATGGAAGGCGGAGTCATACACATACTaGGCCCTCCACAGCTGGTCCTCGGTGATCCCTGGGGTCACCACG +
Preference number: 6 (lower is better)
Translates to: TFSPVSGWKAESYTY*ALHSWSSVIPGVTT
Trigger: CGTGGTGACCCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTCCGCCTTCCATCCGGACACAGGGGAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS TCA 72 bp CATACACATACTTGGCCCTCCACAGCTGGTCCTCGGTaGTCCCTGGGGTCACCACGCCGGCCCTGTAGTTCT +
Preference number: 6 (lower is better)
Translates to: HTHTWPSTAGPR*SLGSPRRPCSS
Trigger: AGAACTACAGGGCCGGCGTGGTGACCCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAAGTATGTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS TCA 72 bp TCCCAGAATCAGTGGAGTGCCTGCCAGGCCTCCTCCTaGACACCCTGGAAGACCCTAGGTCAGCTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SQNQWSACQASS*TPWKTLGQLVQ
Trigger: CTGGACCAGCTGACCTAGGGTCTTCCAGGGTGTTCAGGAGGAGGCCTGGCAGGCACTCCACTGATTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS GCA 72 bp ACACCCTGGAAGACCCTAGGTCAGCTGGTCCAGAGATaGAGAGTCCAATCCAGAGTCCCCCACCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: TPWKTLGQLVQR*RVQSRVPHPAQ
Trigger: CTGGGCTGGGTGGGGGACTCTGGATTGGACTCTGCATCTCTGGACCAGCTGACCTAGGGTCTTCCAGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS CAA 72 bp CCTGTGTCCGGATGGAAGGCGGAGTCATACACATACTaGGCCCTCCACAGCTGGTCCTCGGTGATCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PVSGWKAESYTY*ALHSWSSVIPG
Trigger: CCCAGGGATCACCGAGGACCAGCTGTGGAGGGCCAAGTATGTGTATGACTCCGCCTTCCATCCGGACACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS CCA 72 bp CGGCCAATCAGGACCACCTTCTCCCCTGTGTCCGGATaGAAGGCGGAGTCATACACATACTTGGCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RPIRTTFSPVSG*KAESYTYLALH
Trigger: GTGGAGGGCCAAGTATGTGTATGACTCCGCCTTCCATCCGGACACAGGGGAGAAGGTGGTCCTGATTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS CAA 90 bp AAGGGCTGGCAAGTCTTAGAGAATCAGGCGAGGCTGGAGAGAGAGTaGGGGCCTGGTCACTTCTCCCAGCCATCGCCCATTCCAGGACAA +
Preference number: 6 (lower is better)
Translates to: KGWQVLENQARLERE*GPGHFSQPSPIPGQ
Trigger: TTGTCCTGGAATGGGCGATGGCTGGGAGAAGTGACCAGGCCCCAACTCTCTCTCCAGCCTCGCCTGATTCTCTAAGACTTGCCAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465383.5
ENST00000466982.1
CDS TCA 72 bp GCTGCAATAGAACAGCACAGGCCAGTTAACGTCCCCTaGATCCAACCCCACTCAGGCCCAGGGATTGCCATC +
Preference number: 6 (lower is better)
Translates to: AAIEQHRPVNVP*IQPHSGPGIAI
Trigger: GATGGCAATCCCTGGGCCTGAGTGGGGTTGGATTCAGGGGACGTTAACTGGCCTGTGCTGTTCTATTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS CAA 72 bp AGCCGGAGGGGAACAAGCCAGACCCAAGCCCTAAATTaGCGGAATGAGCTAGGGCGTCAGAACCAGAACTGG +
Preference number: 6 (lower is better)
Translates to: SRRGTSQTQALN*RNELGRQNQNW
Trigger: CCAGTTCTGGTTCTGACGCCCTAGCTCATTCCGCAAATTTAGGGCTTGGGTCTGGCTTGTTCCCCTCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CAA 72 bp CAAGTCTTAGAGAATCAGGCGAGGCTGGAGAGAGAGTaGGGGCCTGGTCACTTCTCCCAGCCATCGCCCATT +
Preference number: 6 (lower is better)
Translates to: QVLENQARLERE*GPGHFSQPSPI
Trigger: AATGGGCGATGGCTGGGAGAAGTGACCAGGCCCCAACTCTCTCTCCAGCCTCGCCTGATTCTCTAAGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465383.5
ENST00000466982.1
CDS TCA 72 bp GGGAACAAGCCAGACCCAAGCCCTAAATTTGCGGAATaGGCTAGGGCGTCAGAACCAGAACTGGGGTGGGTA +
Preference number: 6 (lower is better)
Translates to: GNKPDPSPKFAE*ARASEPELGWV
Trigger: TACCCACCCCAGTTCTGGTTCTGACGCCCTAGCTCATTCCGCAAATTTAGGGCTTGGGTCTGGCTTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS TCA 72 bp TGGGATGGCCATGGCAGGAATCGCCATGCAGATTCTTaGAATCACCACCTGGAAGATTCCCTGCTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: WDGHGRNRHADS*NHHLEDSLLGC
Trigger: GCAGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAGAATCTGCATGGCGATTCCTGCCATGGCCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000465383.5
ENST00000487721.1
CDS GCA 72 bp GTAGTTCTGCACGATGTTCCGAGAAGCTTCCAGCTGTaGCCCGGACAGCAGCAGATTTCGAGGATCAGTAAC +
Preference number: 6 (lower is better)
Translates to: VVLHDVPRSFQL*PGQQQISRISN
Trigger: GTTACTGATCCTCGAAATCTGCTGCTGTCCGGGGCACAGCTGGAAGCTTCTCGGAACATCGTGCAGAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS CCA 72 bp TATCCCATCAGCCTTGCCTTGGAGCCCTTAGACCTGTaGCCGTTTTCTTTCTCCCAAGGCAATGACAGGGCT +
Preference number: 6 (lower is better)
Translates to: YPISLALEPLDL*PFSFSQGNDRA
Trigger: AGCCCTGTCATTGCCTTGGGAGAAAGAAAACGGCCACAGGTCTAAGGGCTCCAAGGCAAGGCTGATGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS CAA 72 bp GTGGGATGGCCATGGCAGGAATCGCCATGCAGATTCTaGAAATCACCACCTGGAAGATTCCCTGCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: VGWPWQESPCRF*KSPPGRFPAWL
Trigger: CAGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAGAATCTGCATGGCGATTCCTGCCATGGCCATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000465383.5
ENST00000487721.1
CDS TCA 72 bp AAAGGCAATTCACCCATTTTGCTTTCCATCGCTCTCTaGAGCTCTCAGAACCGCCTTCCTCTCTGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: KGNSPILLSIAL*SSQNRLPLCLR
Trigger: GCGGAGGCAGAGAGGAAGGCGGTTCTGAGAGCTTCAGAGAGCGATGGAAAGCAAAATGGGTGAATTGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 72 bp TCCAAGCACATCTCTTCCTCGGCACTCTTCTCAATTTaGTCTGGCCACAGGGACCACCAACCTGTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: SKHISSSALFSI*SGHRDHQPVPQ
Trigger: TTGAGGAACAGGTTGGTGGTCCCTGTGGCCAGAGCAAATTGAGAAGAGTGCCGAGGAAGAGATGTGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS GCA 72 bp CCCATTTCACCCACCATAGCTCTATCCCATCAGCCTTaGCTTGGAGCCCTTAGACCTGTGGCCGTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: PISPTIALSHQP*LGALRPVAVFF
Trigger: AAAGAAAACGGCCACAGGTCTAAGGGCTCCAAGGCAAGGCTGATGGGATAGAGCTATGGTGGGTGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS CCA 72 bp AGATTCTTGAAATCACCACCTGGAAGATTCCCTGCTTaGCTGCAGTCACCGAGTAGCCAAGCCTCTGACCTG +
Preference number: 6 (lower is better)
Translates to: RFLKSPPGRFPA*LQSPSSQASDL
Trigger: CAGGTCAGAGGCTTGGCTACTCGGTGACTGCAGCCAAGCAGGGAATCTTCCAGGTGGTGATTTCAAGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000465383.5
ENST00000487721.1
CDS CCA 72 bp GCACATCTCTTCCTCGGCACTCTTCTCAATTTGCTCTaGCCACAGGGACCACCAACCTGTTCCTCAAATGTG +
Preference number: 6 (lower is better)
Translates to: AHLFLGTLLNLL*PQGPPTCSSNV
Trigger: CACATTTGAGGAACAGGTTGGTGGTCCCTGTGGCCAGAGCAAATTGAGAAGAGTGCCGAGGAAGAGATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS GCA 72 bp AGCAGCAGATTTCGAGGATCAGTAACAGTGAAAAAGTaGCGGGCTCTGCCCAGGAAAGTACTTTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SSRFRGSVTVKK*RALPRKVLWSQ
Trigger: CTGGGACCAAAGTACTTTCCTGGGCAGAGCCCGGCACTTTTTCACTGTTACTGATCCTCGAAATCTGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS GCA 72 bp CTTCATGAGGACAGGGGCCATAACCATTGTGTTCAGTaGCATCTCCTCAGCCCTAAAACATGCCTGGTGCAT +
Preference number: 6 (lower is better)
Translates to: LHEDRGHNHCVQ*HLLSPKTCLVH
Trigger: ATGCACCAGGCATGTTTTAGGGCTGAGGAGATGGCACTGAACACAATGGTTATGGCCCCTGTCCTCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000487721.1
CDS CCA 72 bp GTGAAAAAGTGCCGGGCTCTGCCCAGGAAAGTACTTTaGTCCCAGCGAGGTTCCTGGATGTTGATGTCTAAA +
Preference number: 6 (lower is better)
Translates to: VKKCRALPRKVL*SQRGSWMLMSK
Trigger: TTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAGAGCCCGGCACTTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000489434.3
CDS CCA 72 bp GCTGGGGTTTTGCTCATGGATCTGAGCTCTCAGCTCTaGTTCCAGGTTGCTTATGTGTATGGAGCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: AGVLLMDLSSQL*FQVAYVYGALL
Trigger: CAGAAGAGCTCCATACACATAAGCAACCTGGAACCAGAGCTGAGAGCTCAGATCCATGAGCAAAACCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000470252.1
CDS CCA 72 bp CTCAAAGCCCCTTGTTGTAGTAGACCACTTCAACGCTaGGGTTTTGCTCATGGATCTGAGCTCTCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: LKAPCCSRPLQR*GFAHGSELSAL
Trigger: CAGAGCTGAGAGCTCAGATCCATGAGCAAAACCCCAGCGTTGAAGTGGTCTACTACAACAAGGGGCTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224807.9
ENST00000393459.5
ENST00000466982.1
ENST00000470252.1
CDS CAA 90 bp GCTCTGCCCAGGAAAGTACTTTGGTCCCAGCGAGGTTCCTGGATGTaGATGTCTAAAGGCAATTCACCCATTTTGCTTTCCATCGCTCTC +
Preference number: 6 (lower is better)
Translates to: ALPRKVLWSQRGSWM*MSKGNSPILLSIAL
Trigger: GAGAGCGATGGAAAGCAAAATGGGTGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CCA 72 bp GCTGGGGTTTTGCTCATGGATCTGAGCTCTCAGCTCTaGTTCCAGGTTGCTTATGTGTATGGAGCTGCAATA +
Preference number: 6 (lower is better)
Translates to: AGVLLMDLSSQL*FQVAYVYGAAI
Trigger: TATTGCAGCTCCATACACATAAGCAACCTGGAACCAGAGCTGAGAGCTCAGATCCATGAGCAAAACCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466982.1
CDS GCA 72 bp GATTCTGTGAATGAGCCAGAGCTTGTTCCTGTGCTTTaGTTTCGTGTCCTGTTCATGTCTGTGTGTGCGTGT +
Preference number: 6 (lower is better)
Translates to: DSVNEPELVPVL*FRVLFMSVCAC
Trigger: ACACGCACACACAGACATGAACAGGACACGAAAGCAAAGCACAGGAACAAGCTCTGGCTCATTCACAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000487721.1
CDS CCA 72 bp CTGCCCAGGAAAGTACTTTGGTCCCAGCGAGGTTCCTaGATGTTGATGTCTAAAGGCAATTCACCCATTTTG +
Preference number: 6 (lower is better)
Translates to: LPRKVLWSQRGS*MLMSKGNSPIL
Trigger: CAAAATGGGTGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS GCA 72 bp CTCTTCTCTGCGTTATTTGGCTCTCTCCTCATCCTTTaGGGCATTAAAGACCCCTTCTCTGATCATCCTATC +
Preference number: 6 (lower is better)
Translates to: LFSALFGSLLIL*GIKDPFSDHPI
Trigger: GATAGGATGATCAGAGAAGGGGTCTTTAATGCCGCAAAGGATGAGGAGAGAGCCAAATAACGCAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS TCA 72 bp GGAAAGTACTTTGGTCCCAGCGAGGTTCCTGGATGTTaGTGTCTAAAGGCAATTCACCCATTTTGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: GKYFGPSEVPGC*CLKAIHPFCFP
Trigger: TGGAAAGCAAAATGGGTGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CAA 72 bp AGGAAAGTACTTTGGTCCCAGCGAGGTTCCTGGATGTaGATGTCTAAAGGCAATTCACCCATTTTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: RKVLWSQRGSWM*MSKGNSPILLS
Trigger: GGAAAGCAAAATGGGTGAATTGCCTTTAGACATCAACATCCAGGAACCTCGCTGGGACCAAAGTACTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224807.9
ENST00000393459.5
CDS CAA 72 bp TGTTTTCTGTACCCCAAACACTCTTCTCTGCGTTATTaGGCTCTCTCCTCATCCTTTGCGGCATTAAAGACC +
Preference number: 6 (lower is better)
Translates to: CFLYPKHSSLRY*ALSSSFAALKT
Trigger: GGTCTTTAATGCCGCAAAGGATGAGGAGAGAGCCAAATAACGCAGAGAAGAGTGTTTGGGGTACAGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS GCA 72 bp GCTCTCCCCCATGAATCTCAATTACACTACCCCCATTaGTTTCCTACAAAGCACATATTACACTTTCTAAGA +
Preference number: 6 (lower is better)
Translates to: ALPHESQLHYPH*FPTKHILHFLR
Trigger: TCTTAGAAAGTGTAATATGTGCTTTGTAGGAAAGCAATGGGGGTAGTGTAATTGAGATTCATGGGGGAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466982.1
ENST00000470252.1
CDS CAA 72 bp ACAAAGCACATATTACACTTTCTAAGAATGTATTTATaGGGTGCCTCCTTGTTTATTGGTTTCTGCATCAGA +
Preference number: 6 (lower is better)
Translates to: TKHILHFLRMYL*GASLFIGFCIR
Trigger: TCTGATGCAGAAACCAATAAACAAGGAGGCACCCAATAAATACATTCTTAGAAAGTGTAATATGTGCTTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466982.1