RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFXN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000156398

Ensembl transcript IDs: ENST00000369893.10, ENST00000459894.6, ENST00000480358.6, ENST00000602287.5, ENST00000602439.5, ENST00000602544.5, ENST00000602647.5, ENST00000602660.1, ENST00000602670.1, ENST00000602764.5, ENST00000602785.5, ENST00000602831.5, ENST00000602868.1

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGGGGAGGAGGCCCTTTCCCCTTAGAGCAGTGCTCCTCCACGTATaGTGCCAAGACCAACAGAATCAGCATCACCGGGCAATGACTAGA +
Preference number: 1 (lower is better)
Translates to: SGRRPFPLRAVLLHV*CQDQQNQHHRAMTR
Trigger: TCTAGTCATTGCCCGGTGATGCTGATTCTGTTGGTCTTGGCACCATACGTGGAGGAGCACTGCTCTAAGGGGAAAGGGCCTCCTCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 90 bp GCCACTGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACCTTGACTTTCTGCATGAAGTGCAAT +
Preference number: 1 (lower is better)
Translates to: ATGTMKMRKHPLSMT*NGACRTLTFCMKCN
Trigger: ATTGCACTTCATGCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR GCA 90 bp GGGAGGAGGCCCTTTCCCCTTAGAGCAGTGCTCCTCCACGTATGGTaGCAAGACCAACAGAATCAGCATCACCGGGCAATGACTAGAAAT +
Preference number: 1 (lower is better)
Translates to: GRRPFPLRAVLLHVW*QDQQNQHHRAMTRN
Trigger: ATTTCTAGTCATTGCCCGGTGATGCTGATTCTGTTGGTCTTGGCACCATACGTGGAGGAGCACTGCTCTAAGGGGAAAGGGCCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 90 bp GGCATGAGCCACTGCGCCCGGTTGATGCATGTGCTTAAGAACCACTaGTCCAGGGCAGGGGAAACTTTTTGTGTCAAGGATCAGACAGTA +
Preference number: 1 (lower is better)
Translates to: GMSHCARLMHVLKNH*SRAGETFCVKDQTV
Trigger: TACTGTCTGATCCTTGACACAAAAAGTTTCCCCTGCCCTGGAGCAGTGGTTCTTAAGCACATGCATCAACCGGGCGCAGTGGCTCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR CCA 90 bp TGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGCAATaGGGCGTGCAGGACCTTGACTTTCTGCATGAAGTGCAATTTCTC +
Preference number: 1 (lower is better)
Translates to: WHHEDEEAPAQHDLQ*GVQDLDFLHEVQFL
Trigger: GAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459894.6
3UTR TCA 90 bp GTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGGGAGCTCCTTaGCGGGAGGTTACTGAAGCCTTCACATTCCCAACACCCGGCCCA +
Preference number: 1 (lower is better)
Translates to: VTVYFLVSSTKLGAP*REVTEAFTFPTPGP
Trigger: TGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
3UTR GCA 90 bp CAGATACAGTTCCCTGCTTACAAACTCCTAGCCCCATCTCCTTGCTaGTTCTTCTGGATTCTTGTAACACTTATATCTGCGTGCCTGGTT +
Preference number: 1 (lower is better)
Translates to: QIQFPAYKLLAPSPC*FFWILVTLISACLV
Trigger: AACCAGGCACGCAGATATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAGGAGTTTGTAAGCAGGGAACTGTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 90 bp TCTGGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTaGCTCTTATTCAACATCCCACAGCAGCCAACTCAAAGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: SGLALPTPRPFSNLN*LLFNIPQQPTQRRE
Trigger: CTCTCTTCTTTGAGTTGGCTGCTGTGGGATGTTGAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 90 bp TTACAGATACAGTTCCCTGCTTACAAACTCCTAGCCCCATCTCCTTaGTGCTTCTTCTGGATTCTTGTAACACTTATATCTGCGTGCCTG +
Preference number: 1 (lower is better)
Translates to: LQIQFPAYKLLAPSP*CFFWILVTLISACL
Trigger: CAGGCACGCAGATATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAGGAGTTTGTAAGCAGGGAACTGTATCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR CCA 90 bp TTCCCTGCTTACAAACTCCTAGCCCCATCTCCTTGCTGCTTCTTCTaGATTCTTGTAACACTTATATCTGCGTGCCTGGTTTGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: FPAYKLLAPSPCCFF*ILVTLISACLVCSF
Trigger: AAAACTGCAAACCAGGCACGCAGATATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAGGAGTTTGTAAGCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 90 bp GTTCTTCTAGCTAAATACAAATGGCTTCCCTGCTGCCCTGCAAGTTaGCAATTCTTCCTCTCAAATTTCCGCCACACACTACAACCATAC +
Preference number: 1 (lower is better)
Translates to: VLLAKYKWLPCCPAS*QFFLSNFRHTLQPY
Trigger: GTATGGTTGTAGTGTGTGGCGGAAATTTGAGAGGAAGAATTGTCAACTTGCAGGGCAGCAGGGAAGCCATTTGTATTTAGCTAGAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 90 bp TTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTaGTTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAAT +
Preference number: 1 (lower is better)
Translates to: LDRVSNPTRQNSYTH*FQMRNNSPPRSLRN
Trigger: ATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR TCA 90 bp ATCTCACCTCTCACCACTACATTTTCCCACACATTCCACTCACACTaGCCATTGAAGAGATGCCCAGTAACTTCATTTACATATTACAGA +
Preference number: 1 (lower is better)
Translates to: ISPLTTTFSHTFHSH*PLKRCPVTSFTYYR
Trigger: TCTGTAATATGTAAATGAAGTTACTGGGCATCTCTTCAATGGTCAGTGTGAGTGGAATGTGTGGGAAAATGTAGTGGTGAGAGGTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 90 bp CAAAGAAGAGAGATGTTACAAAATGAGACTGAGATGCAGTTTGAGTaGCCACTTTTTAGAATGTCCCTGAACATTATAGCCACCACATAC +
Preference number: 1 (lower is better)
Translates to: QRREMLQNETEMQFE*PLFRMSLNIIATTY
Trigger: GTATGTGGTGGCTATAATGTTCAGGGACATTCTAAAAAGTGGTCACTCAAACTGCATCTCAGTCTCATTTTGTAACATCTCTCTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR TCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTAGCACCCGCTCAGCATaGCCTGCAATGGGGCGTGCA +
Preference number: 2 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCSTRSA*PAMGRA
Trigger: TGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGACCTGCAATGGGGCGTaGAGGACCTTGACTTTCTGC +
Preference number: 2 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRTCNGA*RTLTFC
Trigger: GCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGT...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCCCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACC +
Preference number: 2 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVPLSMT*NGACRT
Trigger: GGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGG...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp AAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAAGCTGGGGGCCTTCAGGCCTTGTTaGCAAAGGGGAAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: KQQSPKELEKSPRAAKLGAFRPC*QRGRRT
Trigger: TGTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGC...CCCCAGCTTGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGAGGCAGAGTTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQRQSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAACTCTGCCT...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GTGCACGTAGCTAAGGAGGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGCAGCATGACCTGCAATaGGGCGTGCAGGACCTTGAC +
Preference number: 2 (lower is better)
Translates to: VHVAKEELVNMGIDWSLLQHDLQ*GVQDLD
Trigger: GTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTG...CAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAGTCTGGCCAGCATGGTaGAACCCCGTCTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPVWPAW*NPVSTK
Trigger: TTTAGTGGAGACGGGGTTTCACCATGCTGGCCAGAC...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTAGGCGTGGTGGCAGGTaGCCTGTAATCCCAGCTACT +
Preference number: 2 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCRRGGR*PVIPAT
Trigger: AGTAGCTGGGATTACAGGGCACCTGCCACCACGCCT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGGCCTTCAGGCCTTGTTaGCAAAGGGGAAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: GAGEYGNRLVLAEVGHLEAFRPC*QRGRRT
Trigger: TGTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGC...CTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTTTTAACCTAATGGGCTaGGGAAGGGAGGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: AVHCCVSFKALWSWLISSFNLMG*GREAAR
Trigger: CCTGGCTGCCTCCCTTCCTCAGCCCATTAGGTTAAA...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAAGCACCCGCTCAGCATaGCCTGCAATGGGGCGTGCA +
Preference number: 2 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTSTRSA*PAMGRA
Trigger: TGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCT...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCCCAGGAGGCAGAGTTTaGAGTGAGCCGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFPGGRV*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAACTCTGCCTCCTGG...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR GCA 90 bp CCTAATGGGCTGAGGAAGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTACCTGCAATGGGGCGTaGAGGACCTTGACTTTCTGC +
Preference number: 2 (lower is better)
Translates to: PNGLRKGGSQEIIPIKVCTCNGA*RTLTFC
Trigger: GCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGT...ACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCTTCCTCAGCCCATTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACCCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACC +
Preference number: 2 (lower is better)
Translates to: SDICWTESAILPDKTHTHPLSMT*NGACRT
Trigger: GGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGG...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGAAGCCCACACGCCACTaGCACCATGAAGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQKPTRH*HHEDEE
Trigger: TTCCTCATCTTCATGGTGCCAGTGGCGTGTGGGCTT...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTACTTTTCCAAATGATTTaGTTGGATGTCTCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLLFQMI*LDVSSL
Trigger: CAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAG...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GCAAAGGGGAAGGAGGACACAAGTGTGCACGTAGCTAAGGAGGAGCTGGTGAATGCAGCTAGAAGACATTaGCCTTTGCTACCCTTTTTC +
Preference number: 2 (lower is better)
Translates to: AKGKEDTSVHVAKEELVNAARRH*PLLPFF
Trigger: GAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGC...ATTCACCAGCTCCTCCTTAGCTACGTGCACACTTGTGTCCTCCTTCCCCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAAGAGGTATGTGGCAGTaGGGTAAGAGAACTTCCCTT +
Preference number: 2 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPRGMWQ*GKRTSL
Trigger: AAGGGAAGTTCTCTTACCCCACTGCCACATACCTCT...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTGATCACTTGAGGCCATaGGTTCGAGACCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCDHLRP*VRDQPG
Trigger: CCCAGGCTGGTCTCGAACTCATGGCCTCAAGTGATC...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCAATATGGGAATAGACTaGTCCTTGCTGAAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVNMGID*SLLKWG
Trigger: GCCCCACTTCAGCAAGGACCAGTCTATTCCCATATT...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGAATATGGGAATAGACTaGTCCTTGCTGAAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: GAGEYGNRLVLAEVGHLENMGID*SLLKWG
Trigger: GCCCCACTTCAGCAAGGACCAGTCTATTCCCATATT...CTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGGCAGCTAGAAGACATTaGCCTTTGCTACCCTTTTTC +
Preference number: 2 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGAARRH*PLLPFF
Trigger: GAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGC...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTAGAGGTATGTGGCAGTaGGGTAAGAGAACTTCCCTT +
Preference number: 2 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCRGMWQ*GKRTSL
Trigger: AAGGGAAGTTCTCTTACCCCACTGCCACATACCTCT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCCAATTCACATTTCTGTaGGAAAAGCCCACACGCCAC +
Preference number: 2 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVQFTFL*EKPTRH
Trigger: GTGGCGTGTGGGCTTTTCCCACAGAAATGTGAATTG...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp AAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAAGCTGGGGTTATTCAATTCACAGTaGTATCTGTTGGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: KQQSPKELEKSPRAAKLGLFNSQ*YLLDRV
Trigger: GACTCTGTCCAACAGATATCACTGTGAATTGAATAA...CCCCAGCTTGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAACGAGGAGGAGGATGTaGAAGGGTGATGAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTTRRRM*KGDEPQ
Trigger: TTGGGGCTCATCACCCTTCCACATCCTCCTCCTCGT...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTGCTGGGGAAGGGAAGTaGCTGTGCATTGCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCAGEGK*LCIAVC
Trigger: ACACACAGCAATGCACAGCCACTTCCCTTCCCCAGC...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp CTTGGTCTCAACTGCCCAAATAGCAGCTTAGGTCCGTTTGAATTCCCTAGAAGAAAGTGTTTTACAGCCTaGCCCAGTCTAGCCCACATC +
Preference number: 2 (lower is better)
Translates to: LGLNCPNSSLGPFEFPRRKCFTA*PSLAHI
Trigger: GATGTGGGCTAGACTGGGCCAGGCTGTAAAACACTT...TCTTCTAGGGAATTCAAACGGACCTAAGCTGCTATTTGGGCAGTTGAGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACAGCATGACCTGCAATaGGGCGTGCAGGACCTTGAC +
Preference number: 2 (lower is better)
Translates to: REAARKLYPLKCVVNAYIQHDLQ*GVQDLD
Trigger: GTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAGTCTGGCCAGCATGGTaGAACCCCGTCTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIVWPAW*NPVSTK
Trigger: TTTAGTGGAGACGGGGTTTCACCATGCTGGCCAGAC...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATTTTAACCTAATGGGCTaGGGAAGGGAGGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ICWTESAILPDKTHTHIDFNLMG*GREAAR
Trigger: CCTGGCTGCCTCCCTTCCTCAGCCCATTAGGTTAAA...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTCTCTTTGGTCCTGGTTaGTTTCCTCTTAGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: AVHCCVSFKALWSWLISSLFGPG*FPLRRF
Trigger: GAACCTTCTAAGAGGAAATCAACCAGGACCAAAGAG...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp CTTGGTCTCAACTGCCCAAATAGCAGCTTAGGTCCGTTTGAATTCCCTAGAAGAGCCCCATCTCCTTGCTaGTTCTTCTGGATTCTTGTA +
Preference number: 2 (lower is better)
Translates to: LGLNCPNSSLGPFEFPRRAPSPC*FFWILV
Trigger: TACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGC...TCTTCTAGGGAATTCAAACGGACCTAAGCTGCTATTTGGGCAGTTGAGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR GCA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAACTTTCTGCATGAAGTaGAATTTCTCAAGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPTFCMK*NFSSLS
Trigger: GGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGT...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459894.6
3UTR-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTAATATGGGAATAGACTaGTCCTTGCTGAAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFINMGID*SLLKWG
Trigger: GCCCCACTTCAGCAAGGACCAGTCTATTCCCATATT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp ACCTCTCACCACTACATTTTCCCACACATTCCACTCACACTGACCATTGAAGAGGCAGCTAGAAGACATTaGCCTTTGCTACCCTTTTTC +
Preference number: 2 (lower is better)
Translates to: TSHHYIFPHIPLTLTIEEAARRH*PLLPFF
Trigger: GAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGC...CTCTTCAATGGTCAGTGTGAGTGGAATGTGTGGGAAAATGTAGTGGTGAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTTCCTTTAAGGCTCTTTaGTCCTGGTTGATTTCCTCT +
Preference number: 2 (lower is better)
Translates to: AVHCCVSFKALWSWLISSSFKAL*SWLISS
Trigger: AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGA...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCTCCTGTGGAGACAGGTaGATTTCCCCTTTAATGAGG +
Preference number: 2 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFSCGDR*ISPLMR
Trigger: CCTCATTAAAGGGGAAATCCACCTGTCTCCACAGGA...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTAATCAAATTAGCCTGTaGTCCCAGCTACCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: FYLKAQAELLDRTVWISTNQISL*SQLPQR
Trigger: CCTCTGGGGTAGCTGGGACCACAGGCTAATTTGATT...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAAAGCCCACACGCCACTaGCACCATGAAGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIKPTRH*HHEDEE
Trigger: TTCCTCATCTTCATGGTGCCAGTGGCGTGTGGGCTT...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR CAA 90 bp GTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATaGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAA +
Preference number: 2 (lower is better)
Translates to: VGQSQQSYQTKLIHT*IPDEKQQSPKELEK
Trigger: TTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR CAA 90 bp ATTACAGATACAGTTCCCTGCTTACAAACTCCTAGCCCCATCTCCTaGCTGCTTCTTCTGGATTCTTGTAACACTTATATCTGCGTGCCT +
Preference number: 2 (lower is better)
Translates to: ITDTVPCLQTPSPIS*LLLLDSCNTYICVP
Trigger: AGGCACGCAGATATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAGGAGTTTGTAAGCAGGGAACTGTATCTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR CAA 90 bp GTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTGTCTaGGAGCTTCGGTTCCAGATAGGAAACTGGCAATTCACATTTCTG +
Preference number: 2 (lower is better)
Translates to: VDIRLKFSILGLDSV*ELRFQIGNWQFTFL
Trigger: CAGAAATGTGAATTGCCAGTTTCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp ACATTGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTCTCTTTGGTCCTGGTTaGTTTCCTCTTAGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: TLIPDEKQQSPKELEKSPLFGPG*FPLRRF
Trigger: GAACCTTCTAAGAGGAAATCAACCAGGACCAAAGAG...AGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTAAAATCAAGTTGCAGTaGATTCCTTGGCCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: FYLKAQAELLDRTVWISTKIKLQ*IPWPRG
Trigger: TCCCCGAGGCCAAGGAATTCACTGCAACTTGATTTT...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR TCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCTTTAGAGACCCTTATTaGAGTAGACATAAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVFRDPY*SRHKAQ
Trigger: TTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAA...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACACAATTCACATTTCTGTaGGAAAAGCCCACACGCCAC +
Preference number: 2 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTQFTFL*EKPTRH
Trigger: GTGGCGTGTGGGCTTTTCCCACAGAAATGTGAATTG...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATGAAGGGAAGTGGCTGTaGATTGCTGTGTGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: ICWTESAILPDKTHTHIDEGKWL*IAVCPL
Trigger: TAAAGGACACACAGCAATGCACAGCCACTTCCCTTC...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGTCAGCTAGAATTACATaGGTAAAAGTTTCCATTGCT +
Preference number: 2 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQSARIT*VKVSIA
Trigger: AGCAATGGAAACTTTTACCCATGTAATTCTAGCTGA...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATCACATTGATTCCAGATaGGAAACAACAGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: ICWTESAILPDKTHTHIDHIDSR*ETTVPQ
Trigger: TTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTG...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp TTCCTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTAGCATCACCGGGCAATaGCTAGAAATGCACGTTCTC +
Preference number: 2 (lower is better)
Translates to: FLSNFRHTLQPYHIKPNISITGQ*LEMHVL
Trigger: GAGAACGTGCATTTCTAGTCATTGCCCGGTGATGCT...AATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR GCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTTTCTTAGCTTCCAATTaGACAAAAACAGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCFLASN*TKTGGR
Trigger: CCTGCCACCTGTTTTTGTGCAATTGGAAGCTAAGAA...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTTCAGCTAGAATTACATaGGTAAAAGTTTCCATTGCT +
Preference number: 2 (lower is better)
Translates to: AVHCCVSFKALWSWLISSSARIT*VKVSIA
Trigger: AGCAATGGAAACTTTTACCCATGTAATTCTAGCTGA...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTCCTTTCCATGATGACTaGCAGCAAGATGCTGTCGCA +
Preference number: 2 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCPFHDD*QQDAVA
Trigger: TGCGACAGCATCTTGCTGCCAGTCATCATGGAAAGG...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459894.6
3UTR-3UTR GCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACTTTTCCAAATGATTTaGTTGGATGTCTCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: REAARKLYPLKCVVNAYILFQMI*LDVSSL
Trigger: CAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR CAA 90 bp TTCCCTTATTATAGAGAAGATTCCAAGAATAGGTTCAGACATGATTaGAAGAACCATGTAACTCTGCTGCCTTGCACGGTCCCCTTTTTA +
Preference number: 2 (lower is better)
Translates to: FPYYREDSKNRFRHD*KNHVTLLPCTVPFL
Trigger: TAAAAAGGGGACCGTGCAAGGCAGCAGAGTTACATGGTTCTTCAAATCATGTCTGAACCTATTCTTGGAATCTTCTCTATAATAAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTCACATTGATTCCAGATaGGAAACAACAGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLHIDSR*ETTVPQ
Trigger: TTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTG...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR GCA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTAGTAAGGCCAGATCCTaGTTTCCATTCAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITSKARS*FPFRLH
Trigger: ATGAAGCCTGAATGGAAAGCAGGATCTGGCCTTACT...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR GCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAAGGACCTTGACTTTCTaGATGAAGTGCAATTTCTCA +
Preference number: 2 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIRTLTF*MKCNFS
Trigger: TGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459894.6
3UTR-3UTR TCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATAACTCATACACACATTaGTTCCAGATGAGAAACAAC +
Preference number: 2 (lower is better)
Translates to: ICWTESAILPDKTHTHIDNSYTH*FQMRNN
Trigger: GTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTT...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp ACTTTAGCAGTCAATTTCCTCTCAAAAACCTGTCAAAGTGTTTTACAGCCTGGCTTATTCAATTCACAGTaGTATCTGTTGGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: TLAVNFLSKTCQSVLQPGLFNSQ*YLLDRV
Trigger: GACTCTGTCCAACAGATATCACTGTGAATTGAATAA...GCCAGGCTGTAAAACACTTTGACAGGTTTTTGAGAGGAAATTGACTGCTAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR TCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATTTTAGAGACCCTTATTaGAGTAGACATAAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: ICWTESAILPDKTHTHIDFRDPY*SRHKAQ
Trigger: TTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAA...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATATCAGCTAGAATTACATaGGTAAAAGTTTCCATTGCT +
Preference number: 2 (lower is better)
Translates to: REAARKLYPLKCVVNAYISARIT*VKVSIA
Trigger: AGCAATGGAAACTTTTACCCATGTAATTCTAGCTGA...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR TCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTAACTCATACACACATTaGTTCCAGATGAGAAACAAC +
Preference number: 2 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCNSYTH*FQMRNN
Trigger: GTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTT...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CCA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTCCTTGCTGCTTCTTCTaGATTCTTGTAACACTTATA +
Preference number: 2 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITPCCFF*ILVTLI
Trigger: TATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGG...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CCA 90 bp TTCCTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACCAAATTATTTTCATaGCACAAGGTCTCTAATTCC +
Preference number: 2 (lower is better)
Translates to: FLSNFRHTLQPYHIKPNITKLFS*HKVSNS
Trigger: GGAATTAGAGACCTTGTGCCATGAAAATAATTTGGT...AATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 72 bp TGGCCTCGGGGAGGAGGCCCTTTCCCCTTAGAGCAGTaGTCCTCCACGTATGGTGCCAAGACCAACAGAATC +
Preference number: 3 (lower is better)
Translates to: WPRGGGPFPLEQ*SSTYGAKTNRI
Trigger: GATTCTGTTGGTCTTGGCACCATACGTGGAGGAGCACTGCTCTAAGGGGAAAGGGCCTCCTCCCCGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 72 bp TCATGCCGCCAGGAAGCTGGAAAGACATGCGCCCGATaGCATTCATCTTCTCCCCAGTGTCGGGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SCRQEAGKTCAR*HSSSPQCRGGR
Trigger: CCTTCCACCCCGACACTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602670.1
3UTR-3UTR CAA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAGGCCTTCAGGCCTTGTaGGCAAAGGGGAAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPGLQAL*AKGKED
Trigger: GTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGCC...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR TCA 72 bp CTCAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTaGAGCCTTCACATTCCCAACACCCGGCCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: LNKTGSSLTGGY*SLHIPNTRPKA
Trigger: GGCTTTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602544.5
ENST00000602670.1
3UTR GCA 72 bp ACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACCTTGACTTTCTGCATG +
Preference number: 3 (lower is better)
Translates to: TMKMRKHPLSMT*NGACRTLTFCM
Trigger: CATGCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR CCA 72 bp GAAGATGAGGAAGCACCCGCTCAGCATGACCTGCAATaGGGCGTGCAGGACCTTGACTTTCTGCATGAAGTG +
Preference number: 3 (lower is better)
Translates to: EDEEAPAQHDLQ*GVQDLDFLHEV
Trigger: CACTTCATGCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CAA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTGGCCTTCAGGCCTTGTaGGCAAAGGGGAAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCGLQAL*AKGKED
Trigger: GTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGCC...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR TCA 72 bp GGTGCCAAGACCAACAGAATCAGCATCACCGGGCAATaGCTAGAAATGCACGTTCTCAGGCTCCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: GAKTNRISITGQ*LEMHVLRLQPR
Trigger: TCTGGGCTGGAGCCTGAGAACGTGCATTTCTAGTCATTGCCCGGTGATGCTGATTCTGTTGGTCTTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 72 bp AGGAAGCACCCGCTCAGCATGACCTGCAATGGGGCGTaGAGGACCTTGACTTTCTGCATGAAGTGCAATTTC +
Preference number: 3 (lower is better)
Translates to: RKHPLSMTCNGA*RTLTFCMKCNF
Trigger: GAAATTGCACTTCATGCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR CCA 72 bp AGCATGAAGCCCGTGATGATCATGCCGCCAGGAAGCTaGAAAGACATGCGCCCGATGACATTCATCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SMKPVMIMPPGS*KDMRPMTFIFS
Trigger: GGAGAAGATGAATGTCATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCATGATCATCACGGGCTTCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
3UTR-3UTR CAA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTAGGCCTTGATAGTGTCTaGGAGCTTCGGTTCCAGATA +
Preference number: 3 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLGLDSV*ELRFQI
Trigger: TATCTGGAACCGAAGCTCCAAGACACTATCAAGGCC...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CAA 90 bp CCTAATGGGCTGAGGAAGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTTGTAACTCTGCTGCCTaGCACGGTCCCCTTTTTAGC +
Preference number: 3 (lower is better)
Translates to: PNGLRKGGSQEIIPIKVCCNSAA*HGPLFS
Trigger: GCTAAAAAGGGGACCGTGCAAGGCAGCAGAGTTACA...ACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCTTCCTCAGCCCATTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CAA 90 bp AAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAAGCTGGGGAGAAGACATTGGCCTTaGCTACCCTTTTTCACTTTT +
Preference number: 3 (lower is better)
Translates to: KQQSPKELEKSPRAAKLGRRHWP*LPFFTF
Trigger: AAAAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCT...CCCCAGCTTGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CAA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCAGTCCCCCAAGGAGCTaGAGAAATCACCTAGGGCAG +
Preference number: 3 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFSPPRS*RNHLGQ
Trigger: CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACT...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 72 bp CAGCACTATTACCAGGATGCCTCTCTTGGTCTCAACTaGCCAAATAGCAGCTTAGGTCCGTTTGAATTCCCT +
Preference number: 3 (lower is better)
Translates to: QHYYQDASLGLN*PNSSLGPFEFP
Trigger: AGGGAATTCAAACGGACCTAAGCTGCTATTTGGGCAGTTGAGACCAAGAGAGGCATCCTGGTAATAGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTAGCCACTGCGCCCGGTaGATGCATGTGCTTAAGAAC +
Preference number: 3 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCSHCAR*MHVLKN
Trigger: GTTCTTAAGCACATGCATCAACCGGGCGCAGTGGCT...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTGGCCTTCAGGCCTTGTaGGCAAAGGGGAAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITGLQAL*AKGKED
Trigger: GTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGCC...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 72 bp GTCCGTTTGAATTCCCTAGAAGATAGTACCTTTATCTaGGGCATAGTGCTTCGTCACCCCAAGTTCGACGGA +
Preference number: 3 (lower is better)
Translates to: VRLNSLEDSTFI*GIVLRHPKFDG
Trigger: TCCGTCGAACTTGGGGTGACGAAGCACTATGCCTCAGATAAAGGTACTATCTTCTAGGGAATTCAAACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 72 bp GCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTaGCTCTTATTCAACATCCCACAGCAGCCAACTCAA +
Preference number: 3 (lower is better)
Translates to: ALPTPRPFSNLN*LLFNIPQQPTQ
Trigger: TTGAGTTGGCTGCTGTGGGATGTTGAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTTTCCAAATGATTTGCTaGGATGTCTCCTCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIFQMIC*DVSSLR
Trigger: TCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAA...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CAA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATATGTAACTCTGCTGCCTaGCACGGTCCCCTTTTTAGC +
Preference number: 3 (lower is better)
Translates to: REAARKLYPLKCVVNAYICNSAA*HGPLFS
Trigger: GCTAAAAAGGGGACCGTGCAAGGCAGCAGAGTTACA...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR TCA 72 bp GTCAGCAATCCTACCAGACAAAACTCATACACACATTaGTTCCAGATGAGAAACAACAGTCCCCCAAGGAGC +
Preference number: 3 (lower is better)
Translates to: VSNPTRQNSYTH*FQMRNNSPPRS
Trigger: GCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR TCA 72 bp GACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCTaGCATGCCAAGGCCAAAGTAAGGCCAGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: DKFPLYSSCDTF*HAKAKVRPDPA
Trigger: AGCAGGATCTGGCCTTACTTTGGCCTTGGCATGTCAGAAGGTATCACAACTACTATATAAGGGGAACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 72 bp AATGTTCAGAATACGCAAATCTCTAAAGACAGGAAGTaGATTGTGAGGCGCTGGCAGGTAGGGAGAATGTGG +
Preference number: 3 (lower is better)
Translates to: NVQNTQISKDRK*IVRRWQVGRMW
Trigger: CCACATTCTCCCTACCTGCCAGCGCCTCACAATTCACTTCCTGTCTTTAGAGATTTGCGTATTCTGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 72 bp TTCCCTGCTTACAAACTCCTAGCCCCATCTCCTTGCTaGTTCTTCTGGATTCTTGTAACACTTATATCTGCG +
Preference number: 3 (lower is better)
Translates to: FPAYKLLAPSPC*FFWILVTLISA
Trigger: CGCAGATATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAGGAGTTTGTAAGCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp ACTTTAGCAGTCAATTTCCTCTCAAAAACCTGTCAAAGTGTTTTACAGCCTGGCCAAACACAGGGGATTTaGCCCCAACTTCCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: TLAVNFLSKTCQSVLQPGQTQGI*PQLPFL
Trigger: GAGAAAGGGAAGTTGGGGCAAAATCCCCTGTGTTTG...GCCAGGCTGTAAAACACTTTGACAGGTTTTTGAGAGGAAATTGACTGCTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp CTTGGTCTCAACTGCCCAAATAGCAGCTTAGGTCCGTTTGAATTCCCTAGAAGAAAACCCCAATTCAGTTaGGCAAACACAGGGGATTTT +
Preference number: 3 (lower is better)
Translates to: LGLNCPNSSLGPFEFPRRKPQFS*ANTGDF
Trigger: AAAATCCCCTGTGTTTGCCAAACTGAATTGGGGTTT...TCTTCTAGGGAATTCAAACGGACCTAAGCTGCTATTTGGGCAGTTGAGACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR GCA 72 bp CAGTTCCCTGCTTACAAACTCCTAGCCCCATCTCCTTaGTGCTTCTTCTGGATTCTTGTAACACTTATATCT +
Preference number: 3 (lower is better)
Translates to: QFPAYKLLAPSP*CFFWILVTLIS
Trigger: AGATATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAGGAGTTTGTAAGCAGGGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTAGAAGACATTGGCCTTaGCTACCCTTTTTCACTTTT +
Preference number: 3 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIRRHWP*LPFFTF
Trigger: AAAAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR-3UTR CAA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCACTTTTCCAAATGATTaGCTTGGATGTCTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFTFPND*LGCLLP
Trigger: AGGGAGGAGACATCCAAGCAAATCATTTGGAAAAGT...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTAGGCATGAGGATTGCTaGAGGTCAGGGGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITRHEDC*RSGVQD
Trigger: GTCTTGAACCCCTGACCTCAAGCAATCCTCATGCCT...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR TCA 72 bp CTCACCACTACATTTTCCCACACATTCCACTCACACTaGCCATTGAAGAGATGCCCAGTAACTTCATTTACA +
Preference number: 3 (lower is better)
Translates to: LTTTFSHTFHSH*PLKRCPVTSFT
Trigger: TGTAAATGAAGTTACTGGGCATCTCTTCAATGGTCAGTGTGAGTGGAATGTGTGGGAAAATGTAGTGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp ACTTTAGCAGTCAATTTCCTCTCAAAAACCTGTCAAAGTGTTTTACAGCCTGGCTTCCAAATGATTTGCTaGGATGTCTCCTCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: TLAVNFLSKTCQSVLQPGFQMIC*DVSSLR
Trigger: TCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAA...GCCAGGCTGTAAAACACTTTGACAGGTTTTTGAGAGGAAATTGACTGCTAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACACACCAGTCTTTCTTaGGTGTTTAACCTAATGGGC +
Preference number: 3 (lower is better)
Translates to: REAARKLYPLKCVVNAYIHTSLS*VFNLMG
Trigger: GCCCATTAGGTTAAACACCAAAGAAAGACTGGTGTG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR TCA 72 bp ACACAGAGGGCCACATACTGCATTACTCCACTTACATaGAATGTTCAGAATACGCAAATCTCTAAAGACAGG +
Preference number: 3 (lower is better)
Translates to: TQRATYCITPLT*NVQNTQISKDR
Trigger: CCTGTCTTTAGAGATTTGCGTATTCTGAACATTTCATGTAAGTGGAGTAATGCAGTATGTGGCCCTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTAAGGAAGGGGAAACATaGTATGTTCTGAAAGAACAT +
Preference number: 3 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCKEGET*YVLKEH
Trigger: ATGTTCTTTCAGAACATACAATGTTTCCCCTTCCTT...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTCAAGTTCTCCATACTaGGCCTTGATAGTGTCTTGG +
Preference number: 3 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLSSSPY*ALIVSW
Trigger: CCAAGACACTATCAAGGCCAAGTATGGAGAACTTGA...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
3UTR TCA 72 bp GAGATGTTACAAAATGAGACTGAGATGCAGTTTGAGTaGCCACTTTTTAGAATGTCCCTGAACATTATAGCC +
Preference number: 3 (lower is better)
Translates to: EMLQNETEMQFE*PLFRMSLNIIA
Trigger: GGCTATAATGTTCAGGGACATTCTAAAAAGTGGTCACTCAAACTGCATCTCAGTCTCATTTTGTAACATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR-3UTR CAA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTTGGCAAATAACACAGTaGACTTTAGCAGTCAATTTC +
Preference number: 3 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITWQITQ*TLAVNF
Trigger: GAAATTGACTGCTAAAGTCAACTGTGTTATTTGCCA...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp CCCACACGCCACTGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGAGCACCCGCTCAGCATaGCCTGCAATGGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: PTRHWHHEDEEAPAQHDLSTRSA*PAMGRA
Trigger: TGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCT...CAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCAGTGGCGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp CCCACACGCCACTGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGAGGCAGAGTTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: PTRHWHHEDEEAPAQHDLRQSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAACTCTGCCT...CAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCAGTGGCGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp CCCACACGCCACTGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PTRHWHHEDEEAPAQHDLWSRDK*HQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCA...CAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCAGTGGCGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGCAATGGGGCGTGCTCCACTTGGGTGCCTaGGGGCACAACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: WHHEDEEAPAQHDLQWGVLHLGA*GHNPHP
Trigger: AGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAG...CACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGCAATGGGGCGTGTCCCCAGTGTCGGGGTaGAAGGCCGAGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: WHHEDEEAPAQHDLQWGVSPVSG*KAESYS
Trigger: GCTGTATGACTCGGCCTTCCACCCCGACACTGGGGA...CACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GTTACTGAAGCCTTCACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: VTEAFTFPTPGPKPSSIAAAPLG*LGAQPP
Trigger: TGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGC...AGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR GCA 90 bp GAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAACACCCGGCCCAAGACTGGTTCACCCACTaGCAGAAGATCACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ELLDGRLLKPSHSQHPAQDWFTH*QKITAG
Trigger: GCCGGCGGTGATCTTCTGGCAGTGGGTGAACCAGTC...TTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR CCA 90 bp TCTAGGGCAACACAGCTCCCATTCTGGGAGATCTGGAGCTTCCTGTGGAGACAGCTCCACTTGGGTGCCTaGGGGCACAACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SRATQLPFWEIWSFLWRQLHLGA*GHNPHP
Trigger: AGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAG...CTGTCTCCACAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGTTGCCCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTAGGCAGAGTTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDIRQSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAACTCTGCCT...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp AGGAAGCTGGAAAGACATGCGCCCGATGACATTCATCTTCTCCCCAGTGTCGGGTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RKLERHAPDDIHLLPSVGWSRDK*HQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCA...CCCGACACTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTTTCCAGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR GCA 90 bp GTGCACGTAGCTAAGGAGGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: VHVAKEELVNMGIDWSLLAAPLG*LGAQPP
Trigger: TGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGC...CAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp CACCGCCGGCATCGTCCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: HRRHRPSCTVTVYFLVSSAAPLG*LGAQPP
Trigger: TGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGC...TGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGGACGATGCCGGCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR GCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGACTGGTTCACCCACTaGCAGAAGATCACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRDWFTH*QKITAG
Trigger: GCCGGCGGTGATCTTCTGGCAGTGGGTGAACCAGTC...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TCTAGGGCAACACAGCTCCCATTCTGGGAGATCTGGAGCTTCCTGTGGAGACAGTCTCCACCATCACCTTaGCCCAGTCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SRATQLPFWEIWSFLWRQSPPSP*PSPAPA
Trigger: AGCGGGAGCTGGACTGGGCCAAGGTGATGGTGGAGA...CTGTCTCCACAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGTTGCCCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTATCCCCAGTGTCGGGGTaGAAGGCCGAGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLSPVSG*KAESYS
Trigger: GCTGTATGACTCGGCCTTCCACCCCGACACTGGGGA...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ATGCCGCCAGGAAGCTGGAAAGACATGCGCCCGATGACATTCATCTTCTCCCCATCCCCAGTGTCGGGGTaGAAGGCCGAGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: MPPGSWKDMRPMTFIFSPSPVSG*KAESYS
Trigger: GCTGTATGACTCGGCCTTCCACCCCGACACTGGGGA...TGGGGAGAAGATGAATGTCATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CCA 90 bp TGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGCAATGGGGCGTGGCTGGGGAAGGGAAGTaGCTGTGCATTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WHHEDEEAPAQHDLQWGVAGEGK*LCIAVC
Trigger: ACACACAGCAATGCACAGCCACTTCCCTTCCCCAGC...CACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGAGCACCCGCTCAGCATaGCCTGCAATGGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGSTRSA*PAMGRA
Trigger: TGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCT...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTCCGAGATCGCACCGTTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDIPRSHR*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAACGGTGCGATCTCGG...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480358.6
CDS-3UTR CCA 90 bp CCTCAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCTCCACTTGGGTGCCTaGGGGCACAACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: PQQNWELLDGRLLKPSHSLHLGA*GHNPHP
Trigger: AGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAG...GGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602544.5
ENST00000602670.1
CDS-3UTR CCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGATGCCGCCAGGAAGCTaGAAAGACATGCGCCCGATG +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRMPPGS*KDMRPM
Trigger: CATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGAACTGGAGCAATGCCGCCAGGAAGCTaGAAAGACATGCGCCCGATG +
Preference number: 4 (lower is better)
Translates to: HIPNTRPKAQLNSCRTGAMPPGS*KDMRPM
Trigger: CATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT...TGCTCCAGTTCTACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CCA 90 bp GTAGAACTGGAGCATGAAGCCCGTGATGATCATGCCGCCAGGAAGCTGGAAAGACGTTGCACTCCAGCCTaGTCCCGGGACAAATGCCAC +
Preference number: 4 (lower is better)
Translates to: VELEHEARDDHAARKLERRCTPA*SRDKCH
Trigger: GTGGCATTTGTCCCGGGACCAGGCTGGAGTGCAACG...TCTTTCCAGCTTCCTGGCGGCATGATCATCACGGGCTTCATGCTCCAGTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR TCA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTATTTAACCTAATGGGCTaGGGAAGGGAGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLFNLMG*GREAAR
Trigger: CCTGGCTGCCTCCCTTCCTCAGCCCATTAGGTTAAA...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTAGTGGATTTGGCCCCTTaGGCCATAGCTTGCCAACTC +
Preference number: 4 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLVDLAP*AIACQL
Trigger: GAGTTGGCAAGCTATGGCTCAAGGGGCCAAATCCAC...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp CCCACACGCCACTGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGGTGATGTTTAGGAAGTaGTTCACTCTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTRHWHHEDEEAPAQHDLVMFRK*FTLPRK
Trigger: CTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCAC...CAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCAGTGGCGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSAAPLG*LGAQPP
Trigger: TGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGC...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp ACTGAAGCCTTCACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTATTGGCATACAGCAGCTaGTCCACTTGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TEAFTFPTPGPKPSSIAVLAYSS*STWVPG
Trigger: CCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAA...TACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CCA 90 bp CAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAACTCCACTTGGGTGCCTaGGGGCACAACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: QQNWELLDGRLLKPSHSQLHLGA*GHNPHP
Trigger: AGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAG...TTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602544.5
ENST00000602670.1
CDS-3UTR CCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAACACAGCTCCCATTCTaGGAGATCTGGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGTQLPF*EIWSFL
Trigger: CAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGT...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp CAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAACACAACCCCCATCCTTaGCCCAGTCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QQNWELLDGRLLKPSHSQHNPHP*PSPAPA
Trigger: AGCGGGAGCTGGACTGGGCCAAGGATGGGGGTTGTG...TTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR TCA 90 bp ACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGAACTGGAGCATCAGTGCGGGGGTCCGTaGTGTTTAGGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TFPTPGPKPSSIAVELEHQCGGP*CLGSAS
Trigger: TGAAGCACTTCCTAAACATCACGGACCCCCGCACTG...ATGCTCCAGTTCTACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR TCA 90 bp TCACCCACTGCCAGAAGATCACCGCCGGCATCGTCCAAGCTGTACTGTAACTGTAAGACATGCGCCCGATaGCATTCATCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPTARRSPPASSKLYCNCKTCAR*HSSSPQ
Trigger: CTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTT...ACAGTTACAGTACAGCTTGGACGATGCCGGCGGTGATCTTCTGGCAGTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR TCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTAGGCAGAGTTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCRQSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAACTCTGCCT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TCTAGGGCAACACAGCTCCCATTCTGGGAGATCTGGAGCTTCCTGTGGAGACAGGAAATCCAAGAGGCTTaGGGAGCTGAGAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRATQLPFWEIWSFLWRQEIQEA*GAEKEG
Trigger: CCCTTCCTTCTCAGCTCCTCAAGCCTCTTGGATTTC...CTGTCTCCACAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGTTGCCCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGGGCAGGAGGATCACTTaGGTCCAGGAGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGGRRIT*VQEAEE
Trigger: TTCCTCAGCCTCCTGGACTCAAGTGATCCTCCTGCC...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp AGACATGCGCCCGATGACATTCATCTTCTCCCCAGTGTCGGGGTGGAAGGCCGAGTGATGTTTAGGAAGTaGTTCACTCTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RHAPDDIHLLPSVGVEGRVMFRK*FTLPRK
Trigger: CTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCAC...TCGGCCTTCCACCCCGACACTGGGGAGAAGATGAATGTCATCGGGCGCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR GCA 90 bp CCTCAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCTTGGCATACAGCAGCTaGTCCACTTGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQQNWELLDGRLLKPSHSLAYSS*STWVPG
Trigger: CCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAA...GGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602544.5
ENST00000602670.1
CDS-3UTR GCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGTGCTTAAGAACCACTaGTCCAGGGCAGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRVLKNH*SRAGET
Trigger: AGTTTCCCCTGCCCTGGAGCAGTGGTTCTTAAGCAC...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAACACCCGGCCCAAATAAAACTGTGGACCTaGTCCCGGGACAAATGCCAC +
Preference number: 4 (lower is better)
Translates to: ELLDGRLLKPSHSQHPAQIKLWT*SRDKCH
Trigger: GTGGCATTTGTCCCGGGACCAGGTCCACAGTTTTAT...TTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR CCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTCTCCACTTGGGTGCCTaGGGGCACAACCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSLHLGA*GHNPHP
Trigger: AGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAG...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAATCCCCAGTGTCGGGGTaGAAGGCCGAGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: QQNWELLDGRLLKPSHSQSPVSG*KAESYS
Trigger: GCTGTATGACTCGGCCTTCCACCCCGACACTGGGGA...TTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602544.5
ENST00000602670.1
CDS-3UTR TCA 90 bp ACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGAACTGGAGCATAAGACATGCGCCCGATaGCATTCATCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TFPTPGPKPSSIAVELEHKTCAR*HSSSPQ
Trigger: CTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTT...ATGCTCCAGTTCTACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR TCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGGTCTGGCCAGCATGGTaGAACCCCGTCTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGVWPAW*NPVSTK
Trigger: TTTAGTGGAGACGGGGTTTCACCATGCTGGCCAGAC...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTGCGGCGCTTTCTGACTaGTGTGGGGGAAGCCGCATT +
Preference number: 4 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLAALSD*CGGSRI
Trigger: AATGCGGCTTCCCCCACATCAGTCAGAAAGCGCCGC...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR TCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTGACTGGCAGCAAGACTaGCTGATGTGGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSDWQQD*LMWGKP
Trigger: CGGCTTCCCCCACATCAGTCAGTCTTGCTGCCAGTC...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480358.6
CDS-3UTR GCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAGGTCAGCCTCCATCTTaGTCACACATAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGGQPPS*SHIKLW
Trigger: CCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACC...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGTTGGCATACAGCAGCTaGTCCACTTGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQLAYSS*STWVPG
Trigger: CCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAA...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTGACTGGTTCACCCACTaGCAGAAGATCACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSDWFTH*QKITAG
Trigger: GCCGGCGGTGATCTTCTGGCAGTGGGTGAACCAGTC...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTCCAGGAGGCAGAGTTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSPGGRV*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAACTCTGCCTCCTGG...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TCTAGGGCAACACAGCTCCCATTCTGGGAGATCTGGAGCTTCCTGTGGAGACAGGCTTCCCTGCTGCCCTaGAAGTTGACAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRATQLPFWEIWSFLWRQASLLP*KLTILP
Trigger: AGGAAGAATTGTCAACTTGCAGGGCAGCAGGGAAGC...CTGTCTCCACAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGTTGCCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAAGTCATACAGCTTCTTaGCATACAGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGSHTAS*HTAAAP
Trigger: TGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACT...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAAATTACAAGGCATACTaGTCCCGGGACAAATGCCAC +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGNYKAY*SRDKCH
Trigger: GTGGCATTTGTCCCGGGACCAGTATGCCTTGTAATT...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR TCA 90 bp GTGCACGTAGCTAAGGAGGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGAAGACATGCGCCCGATaGCATTCATCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VHVAKEELVNMGIDWSLLKTCAR*HSSSPQ
Trigger: CTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTT...CAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGGTCTGGCCAGCATGGTaGAACCCCGTCTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: GAGEYGNRLVLAEVGHLEVWPAW*NPVSTK
Trigger: TTTAGTGGAGACGGGGTTTCACCATGCTGGCCAGAC...CTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGTTTAACCTAATGGGCTaGGGAAGGGAGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQFNLMG*GREAAR
Trigger: CCTGGCTGCCTCCCTTCCTCAGCCCATTAGGTTAAA...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TCACCCACTGCCAGAAGATCACCGCCGGCATCGTCCAAGCTGTACTGTAACTGTGTGATGTTTAGGAAGTaGTTCACTCTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPTARRSPPASSKLYCNCVMFRK*FTLPRK
Trigger: CTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCAC...ACAGTTACAGTACAGCTTGGACGATGCCGGCGGTGATCTTCTGGCAGTGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR GCA 90 bp CAACAAAACTGGGAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAAGCACAACCCCCATCCTaGTCTTCTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: QQNWELLDGRLLKPSHSQAQPPS*SSPPSP
Trigger: AGGTGATGGTGGAGAAGAGCAGGATGGGGGTTGTGC...TTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTCCCAGTTTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR GCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTAAPLG*LGAQPP
Trigger: TGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGC...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp CCTAATGGGCTGAGGAAGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTTTGGCATACAGCAGCTaGTCCACTTGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PNGLRKGGSQEIIPIKVCLAYSS*STWVPG
Trigger: CCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAA...ACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCTTCCTCAGCCCATTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTTTGGCATACAGCAGCTaGTCCACTTGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSLAYSS*STWVPG
Trigger: CCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAA...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTACCTGCAATGGGGCGTaGAGGACCTTGACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCTCNGA*RTLTFC
Trigger: GCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp ACATTGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTCCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: TLIPDEKQQSPKELEKSPPLSMT*NGACRT
Trigger: GGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGG...AGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTAATATGGGAATAGACTaGTCCTTGCTGAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDINMGID*SLLKWG
Trigger: GCCCCACTTCAGCAAGGACCAGTCTATTCCCATATT...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAGCAGCTAGAAGACATTaGCCTTTGCTACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGAARRH*PLLPFF
Trigger: GAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGC...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTACGAGGAGGAGGATGTaGAAGGGTGATGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCTRRRM*KGDEPQ
Trigger: TTGGGGCTCATCACCCTTCCACATCCTCCTCCTCGT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGAGAGGTATGTGGCAGTaGGGTAAGAGAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRRGMWQ*GKRTSL
Trigger: AAGGGAAGTTCTCTTACCCCACTGCCACATACCTCT...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp GGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGGCTGGGGAAGGGAAGTaGCTGTGCATTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAGEYGNRLVLAEVGHLEAGEGK*LCIAVC
Trigger: ACACACAGCAATGCACAGCCACTTCCCTTCCCCAGC...CTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGTAATTCCAACACTTTaGAAGGCTGAGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDIVIPTL*KAEGGG
Trigger: TCCTCCTCCCTCAGCCTTCCAAAGTGTTGGAATTAC...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp CAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTACCCTTTTTCACTTCAGTGCGGGGGTCCGTaGTGTTTAGGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGLRKQLEDIGLCYPFSLQCGGP*CLGSAS
Trigger: TGAAGCACTTCCTAAACATCACGGACCCCCGCACTG...AAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCGGCCATCTGCCTGACTaGTGTGGGGGAAGCCGCATT +
Preference number: 4 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFGHLPD*CGGSRI
Trigger: AATGCGGCTTCCCCCACATCAGTCAGGCAGATGGCC...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGCTCTTTGGTCCTGGTTaGTTTCCTCTTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRLFGPG*FPLRRF
Trigger: GAACCTTCTAAGAGGAAATCAACCAGGACCAAAGAG...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTAGGCTGAGGAAGCAATaGGTCATGATCATACCATTG +
Preference number: 4 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDIRLRKQ*VMIIPL
Trigger: CAATGGTATGATCATGACTCATTGCTTCCTCAGCCT...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTAGCTACTTGGGAGGCTaGGGTGGGACAATCACCAGA +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSSYLGG*GGTITR
Trigger: TCTGGTGATTGTCCCACCTCAGCCTCCCAAGTAGCT...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAAAGGGCGGCGCTTTCTaGCTGATGTGGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTKGGAF*LMWGKP
Trigger: CGGCTTCCCCCACATCAGTCAGAAAGCGCCGCCCTT...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR GCA 90 bp ACTGAAGCCTTCACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGGTCAGCCTCCATCTTaGTCACACATAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: TEAFTFPTPGPKPSSIAVGQPPS*SHIKLW
Trigger: CCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACC...TACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR GCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTGCACAACCCCCATCCTaGTCTTCTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSAQPPS*SSPPSP
Trigger: AGGTGATGGTGGAGAAGAGCAGGATGGGGGTTGTGC...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGTTGTCAACATGTTCATaGCCACAGCCGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQLSTCS*PQPWPQ
Trigger: CTGTGGCCACGGCTGTGGGCATGAACATGTTGACAA...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTAGGCGTGGTGGCAGGTaGCCTGTAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIRRGGR*PVIPAT
Trigger: AGTAGCTGGGATTACAGGGCACCTGCCACCACGCCT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCACCAAGGCATGAGGATTaGTTGAGGTCAGGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPPRHED*LRSGVQ
Trigger: TTGAACCCCTGACCTCAAGCAATCCTCATGCCTTGG...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp GCAAAGGGGAAGGAGGACACAAGTGTGCACGTAGCTAAGGAGGAGCTGGTGAATCTAGCCCCATCTCCTTaGTGCTTCTTCTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: AKGKEDTSVHVAKEELVNLAPSP*CFFWIL
Trigger: AAGAATCCAGAAGAAGCAGCAAGGAGATGGGGCTAG...ATTCACCAGCTCCTCCTTAGCTACGTGCACACTTGTGTCCTCCTTCCCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp CCCACTGCCAGAAGATCACCGCCGGCATCGTCCAAGCTGTACTGTAACTGTTTAAGTCATACAGCTTCTTaGCATACAGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTARRSPPASSKLYCNCLSHTAS*HTAAAP
Trigger: TGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACT...TAAACAGTTACAGTACAGCTTGGACGATGCCGGCGGTGATCTTCTGGCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR CCA 90 bp ATAGCTGTAGAACTGGAGCATGAAGCCCGTGATGATCATGCCGCCAGGAAGCTGAGTCATACAGCTTCTTaGCATACAGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IAVELEHEARDDHAARKLSHTAS*HTAAAP
Trigger: TGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACT...CAGCTTCCTGGCGGCATGATCATCACGGGCTTCATGCTCCAGTTCTACAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTATGCCGCCAGGAAGCTaGAAAGACATGCGCCCGATG +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIMPPGS*KDMRPM
Trigger: CATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp AAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGACAGCATGACCTGCAATaGGGCGTGCAGGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: KFSILGLDSVLELRFQIGQHDLQ*GVQDLD
Trigger: GTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTG...TCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTAAGCCCACACGCCACTaGCACCATGAAGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCKPTRH*HHEDEE
Trigger: TTCCTCATCTTCATGGTGCCAGTGGCGTGTGGGCTT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTGCCTTCAGGCCTTGTTaGCAAAGGGGAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLAFRPC*QRGRRT
Trigger: TGTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGC...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGCAGCTAGAAGACATTaGCCTTTGCTACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRAARRH*PLLPFF
Trigger: GAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGC...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGATCCTTTAAGGCTCTTTaGTCCTGGTTGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGSFKAL*SWLISS
Trigger: AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGA...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCATTGCACAAAAACAGGTaGCAGGTGGATTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPLHKNR*QVDLAP
Trigger: AGGGGCCAAATCCACCTGCCACCTGTTTTTGTGCAA...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTAAGACATGCGCCCGATaGCATTCATCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLKTCAR*HSSSPQ
Trigger: CTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTT...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAAAGGGCCATCTGCCTaGCTGATGTGGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHKGPSA*LMWGKP
Trigger: CGGCTTCCCCCACATCAGTCAGGCAGATGGCCCTTT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGGCAGCTCTCCGGGAATaGCCAATCTCATTTTCATTC +
Preference number: 4 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGAALRE*PISFSF
Trigger: GAATGAAAATGAGATTGGTCATTCCCGGAGAGCTGC...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGATTTAACCTAATGGGCTaGGGAAGGGAGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KFSILGLDSVLELRFQIGFNLMG*GREAAR
Trigger: CCTGGCTGCCTCCCTTCCTCAGCCCATTAGGTTAAA...TCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TGGCACCATGAAGATGAGGAAGCACCCGCTCAGCATGACCTGCAATGGGGCGTGAACTCATACACACATTaGTTCCAGATGAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: WHHEDEEAPAQHDLQWGVNSYTH*FQMRNN
Trigger: GTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTT...CACGCCCCATTGCAGGTCATGCTGAGCGGGTGCTTCCTCATCTTCATGGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAAGGAGAAGTAAAAATTaGGTACTAGGGAAGGACCAA +
Preference number: 4 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGRRSKN*VLGKDQ
Trigger: TTGGTCCTTCCCTAGTACTCAATTTTTACTTCTCCT...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGAGCTGCAATGAGCCTTaGTTGTGCCACTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQSCNEP*LCHCTP
Trigger: TGGAGTACAGTGGCACAATCAAGGCTCATTGCAGCT...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCWSRDK*HQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCA...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp CATCGTCCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: HRPSCTVTVYFLVSSTKLWSRDK*HQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCA...CAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGGACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR GCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYIPLSMT*NGACRT
Trigger: GGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp CATTTAGAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCCGCTCAGCATGACCTaGAATGGGGCGTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: HLETLIEVDIRLKFSILGPLSMT*NGACRT
Trigger: GGTCCTGCACGCCCCATTGCAGGTCATGCTGAGCGG...GCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCAGGCGTGGTGGCAGGTaGCCTGTAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFRRGGR*PVIPAT
Trigger: AGTAGCTGGGATTACAGGGCACCTGCCACCACGCCT...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCTCGCCCAGGTTGGAGTaGAGTGGCGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFSPRLE*SGAILA
Trigger: AGCCAAGATTGCGCCACTGCACTCCAACCTGGGCGA...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGGGATCCTGCAATCTGTaGTTTAACAAGCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQGSCNL*FNKPAS
Trigger: GCTGGCAGGCTTGTTAAAGCACAGATTGCAGGATCC...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GTGCACGTAGCTAAGGAGGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGTCACACATAAAACTGTaGACCTGGTCCCGGGACAAA +
Preference number: 4 (lower is better)
Translates to: VHVAKEELVNMGIDWSLLSHIKL*TWSRDK
Trigger: TTTGTCCCGGGACCAGGTCCACAGTTTTATGTGTGA...CAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TCCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGGGAGCATGCCGCCAGGAAGCTaGAAAGACATGCGCCCGATG +
Preference number: 4 (lower is better)
Translates to: SKLYCNCLLLGLLNKTGSMPPGS*KDMRPM
Trigger: CATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT...GCTCCCAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR CCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTAAGCCCACACGCCACTaGCACCATGAAGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSKPTRH*HHEDEE
Trigger: TTCCTCATCTTCATGGTGCCAGTGGCGTGTGGGCTT...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTACGAGGAGGAGGATGTaGAAGGGTGATGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFITRRRM*KGDEPQ
Trigger: TTGGGGCTCATCACCCTTCCACATCCTCCTCCTCGT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTAGTTTGAAACCAGCCTaGGCAACATGGAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCSLKPA*ATWREP
Trigger: GGGTTCTCTCCATGTTGCCCAGGCTGGTTTCAAACT...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp CACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGAACTGGAGCATCACACATAAAACTGTaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: HIPNTRPKAQLNSCRTGASHIKL*TCNPSY
Trigger: GTAGCTGGGATTACAGGTCCACAGTTTTATGTGTGA...TGCTCCAGTTCTACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR TCA 90 bp ACATTGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTCAGTGCGGGGGTCCGTaGTGTTTAGGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLIPDEKQQSPKELEKSPQCGGP*CLGSAS
Trigger: TGAAGCACTTCCTAAACATCACGGACCCCCGCACTG...AGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGCAGTGCGGGGGTCCGTaGTGTTTAGGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: EVDIRLKFSILGLDSVLEQCGGP*CLGSAS
Trigger: TGAAGCACTTCCTAAACATCACGGACCCCCGCACTG...CTCCAAGACACTATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TCCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGGGAGCCAGTGCGGGGGTCCGTaGTGTTTAGGAAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SKLYCNCLLLGLLNKTGSQCGGP*CLGSAS
Trigger: TGAAGCACTTCCTAAACATCACGGACCCCCGCACTG...GCTCCCAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR TCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCGGCTCCAGCCCAGAGTaGCAGAATCTGGCAATGGAT +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFGSSPE*QNLAMD
Trigger: ATCCATTGCCAGATTCTGTCACTCTGGGCTGGAGCC...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCGGCAGGAGGATTACTTaGGCTCAGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFGRRIT*AQEVEA
Trigger: AGCCTCAACCTCCTGAGCTCAAGTAATCCTCCTGCC...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGAGATTGAAGCTGCAATaGGCCTTGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQRLKLQ*ALIVPL
Trigger: CAGTGGCACAATCAAGGCTCATTGCAGCTTCAATCT...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp ATGATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGCTTCACAAATTGCTCTaGAATCCATCATCCATTGCT +
Preference number: 4 (lower is better)
Translates to: MICLDVSSLRGPQLLVSRLHKLL*NPSSIA
Trigger: AGCAATGGATGATGGATTTCAGAGCAATTTGTGAAG...CCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATGGCAGCAAGACTGACTaGTGTGGGGGAAGCCGCATT +
Preference number: 4 (lower is better)
Translates to: ETLIEVDIRLKFSILGLDGSKTD*CGGSRI
Trigger: AATGCGGCTTCCCCCACATCAGTCAGTCTTGCTGCC...ATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480358.6
CDS-3UTR GCA 90 bp CATTTAGAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: HLETLIEVDIRLKFSILGWSRDK*HQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCA...GCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGACCTGCAATGGGGCGTaGAGGACCTTGACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: EVDIRLKFSILGLDSVLETCNGA*RTLTFC
Trigger: GCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGT...CTCCAAGACACTATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACCAGGAGGCAGAGTTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIPGGRV*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAACTCTGCCTCCTGG...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGGCGTGGTGGCAGGTaGCCTGTAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: ETLIEVDIRLKFSILGLDRRGGR*PVIPAT
Trigger: AGTAGCTGGGATTACAGGGCACCTGCCACCACGCCT...ATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGGAAGGGAAGTGGCTGTaGATTGCTGTGTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQEGKWL*IAVCPL
Trigger: TAAAGGACACACAGCAATGCACAGCCACTTCCCTTC...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTATGTAACACTTATATCTaGGTGCCTGGTTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLCNTYI*VPGLQF
Trigger: AAACTGCAAACCAGGCACGCAGATATAAGTGTTACA...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp CCTAATGGGCTGAGGAAGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTATAAAACTGTGGACCTaGTCCCGGGACAAATGCCAC +
Preference number: 4 (lower is better)
Translates to: PNGLRKGGSQEIIPIKVCIKLWT*SRDKCH
Trigger: GTGGCATTTGTCCCGGGACCAGGTCCACAGTTTTAT...ACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCTTCCTCAGCCCATTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATATCCCCAGTGTCGGGGTaGAAGGCCGAGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYISPVSG*KAESYS
Trigger: GCTGTATGACTCGGCCTTCCACCCCGACACTGGGGA...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCCGAGAAATAACTACTTaGGTGATGCCTATGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVREITT*VMPMAA
Trigger: TGCGGCCATAGGCATCACCCAAGTAGTTATTTCTCG...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACCAGCATGACCTGCAATaGGGCGTGCAGGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHQHDLQ*GVQDLD
Trigger: GTCAAGGTCCTGCACGCCCCATTGCAGGTCATGCTG...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTCAGGTAGGGAGAATGTaGAGTGACTGCCAATGGGTA +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSQVGRM*SDCQWV
Trigger: TACCCATTGGCAGTCACTCCACATTCTCCCTACCTG...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GCAAAGGGGAAGGAGGACACAAGTGTGCACGTAGCTAAGGAGGAGCTGGTGAATCTCAAGCTGAGCTATTaGATAGGACAGTCTGGATTA +
Preference number: 4 (lower is better)
Translates to: AKGKEDTSVHVAKEELVNLKLSY*IGQSGL
Trigger: TAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAG...ATTCACCAGCTCCTCCTTAGCTACGTGCACACTTGTGTCCTCCTTCCCCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTAGCACCCGCTCAGCATaGCCTGCAATGGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCSTRSA*PAMGRA
Trigger: TGCACGCCCCATTGCAGGTCATGCTGAGCGGGTGCT...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCCTCTTTGGTCCTGGTTaGTTTCCTCTTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVLFGPG*FPLRRF
Trigger: GAACCTTCTAAGAGGAAATCAACCAGGACCAAAGAG...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTGGCATGAGGATTGCTTaGGGTCAGGGGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTGMRIA*GQGFKT
Trigger: GGTCTTGAACCCCTGACCTCAAGCAATCCTCATGCC...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTGGTCAGCCTCCATCTTaGTCACACATAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: AVHCCVSFKALWSWLISSGQPPS*SHIKLW
Trigger: CCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACC...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACGCACAACCCCCATCCTaGTCTTCTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHAQPPS*SSPPSP
Trigger: AGGTGATGGTGGAGAAGAGCAGGATGGGGGTTGTGC...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGCTTTTCCAAATGATTTaGTTGGATGTCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGLFQMI*LDVSSL
Trigger: CAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAG...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAACAGGCATGAGCCACTaGGCCCGGTTGATGCATGTG +
Preference number: 4 (lower is better)
Translates to: FTVISVGQSQQSYQTKLITGMSH*ARLMHV
Trigger: CACATGCATCAACCGGGCGCAGTGGCTCATGCCTGT...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTCCTTTCCATGATGACTaGCAGCAAGATCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIPFHDD*QQDHPR
Trigger: CCTGGGATGATCTTGCTGCCAGTCATCATGGAAAGG...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTGCCTTCAGGCCTTGTTaGCAAAGGGGAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTAFRPC*QRGRRT
Trigger: TGTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGC...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGGCAGCTAGAAGACATTaGCCTTTGCTACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQAARRH*PLLPFF
Trigger: GAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGC...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTACGAGGAGGAGGATGTaGAAGGGTGATGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTTRRRM*KGDEPQ
Trigger: TTGGGGCTCATCACCCTTCCACATCCTCCTCCTCGT...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTAGAGGTATGTGGCAGTaGGGTAAGAGAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLRGMWQ*GKRTSL
Trigger: AAGGGAAGTTCTCTTACCCCACTGCCACATACCTCT...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp GTGCACGTAGCTAAGGAGGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGTCCTTTAAGGCTCTTTaGTCCTGGTTGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VHVAKEELVNMGIDWSLLSFKAL*SWLISS
Trigger: AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGA...CAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTCACATTGATTCCAGATaGGAAACAACAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLHIDSR*ETTVPQ
Trigger: TTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTG...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCGAGATGCAGTTTGAGTaGCCACTTTTTAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVEMQFE*PLFRMS
Trigger: GGACATTCTAAAAAGTGGTCACTCAAACTGCATCTC...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAGTCTAGCCCACATCTaGGCCCAGAGGAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHSLAHI*AQRKLF
Trigger: GAACAACTTCCTCTGGGCTCAGATGTGGGCTAGACT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAAGCAGAAGAATCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTSRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCT...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp ATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGAAACTGGCAAGTGATGTTTAGGAAGTaGTTCACTCTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILGLDSVLELRFQIGNWQVMFRK*FTLPRK
Trigger: CTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCAC...TTGCCAGTTTCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTGACTGGTTCACCCACTaGCAGAAGATCACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLDWFTH*QKITAG
Trigger: GCCGGCGGTGATCTTCTGGCAGTGGGTGAACCAGTC...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATACCTGCAATGGGGCGTaGAGGACCTTGACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ICWTESAILPDKTHTHIDTCNGA*RTLTFC
Trigger: GCAGAAAGTCAAGGTCCTGCACGCCCCATTGCAGGT...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCTTTTCCAAATGATTTaGTTGGATGTCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQLFQMI*LDVSSL
Trigger: CAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAG...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTCCAGGAGGCAGAGTTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCPGGRV*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAACTCTGCCTCCTGG...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGAAGGGAAGTGGCTGTaGATTGCTGTGTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIEGKWL*IAVCPL
Trigger: TAAAGGACACACAGCAATGCACAGCCACTTCCCTTC...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCCACAGTGATATCTGTTaGACAGAGTCAGCAATCCTA +
Preference number: 4 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVHSDIC*TESAIL
Trigger: TAGGATTGCTGACTCTGTCCAACAGATATCACTGTG...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
3UTR CAA 72 bp CCTTTCTCCTTTTACCTGAAAGCTCAAGCTGAGCTATaGGATAGGACAGTCTGGATTAGCACTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: PFSFYLKAQAEL*DRTVWISTSHT
Trigger: GGTGTGGGAAGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAAGGAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATAAGACATGCGCCCGATaGCATTCATCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ICWTESAILPDKTHTHIDKTCAR*HSSSPQ
Trigger: CTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTT...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACGCAGATTCCCTTTATaGGCTCCTGCTGTCGCATCA +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYIRRFPL*APAVAS
Trigger: TGATGCGACAGCAGGAGCTCATAAAGGGAATCTGCG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATAACACGGTCCTCTCTGTaGCTTCGTCCCTGTCTACTT +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYITRSSL*LRPCLL
Trigger: AAGTAGACAGGGACGAAGTCACAGAGAGGACCGTGT...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp CCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGGGAGCTGGTCAGCCTCCATCTTaGTCACACATAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: PSCTVTVYFLVSSTKLGAGQPPS*SHIKLW
Trigger: CCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACC...AGCTCCCAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR GCA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGACTTTCTGCATGAAGTaGAATTTCTCAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQTFCMK*NFSSLS
Trigger: GGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGT...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGAAAATGAGACTGAGATaGAGTTTGAGTGACCACTTT +
Preference number: 4 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGKMRLR*SLSDHF
Trigger: AAAGTGGTCACTCAAACTGCATCTCAGTCTCATTTT...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCACAGATACAGTTCCCTaGTTACAAACTCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFTDTVP*LQTPSP
Trigger: GGGGCTAGGAGTTTGTAAGCAGGGAACTGTATCTGT...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp CTTGGTCTCAACTGCCCAAATAGCAGCTTAGGTCCGTTTGAATTCCCTAGAAGATCTCTTGGTCTCAACTaGCCAAATAGCAGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: LGLNCPNSSLGPFEFPRRSLGLN*PNSSLG
Trigger: ACCTAAGCTGCTATTTGGGCAGTTGAGACCAAGAGA...TCTTCTAGGGAATTCAAACGGACCTAAGCTGCTATTTGGGCAGTTGAGACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp CCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGGGAGCTTCACACATAAAACTGTaGACCTGGTCCCGGGACAAA +
Preference number: 4 (lower is better)
Translates to: PSCTVTVYFLVSSTKLGASHIKL*TWSRDK
Trigger: TTTGTCCCGGGACCAGGTCCACAGTTTTATGTGTGA...AGCTCCCAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR CCA 90 bp GAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGAGTCATACAGCTTCTTaGCATACAGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EVDIRLKFSILGLDSVLESHTAS*HTAAAP
Trigger: TGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACT...CTCCAAGACACTATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTATGCCGCCAGGAAGCTaGAAAGACATGCGCCCGATG +
Preference number: 4 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLMPPGS*KDMRPM
Trigger: CATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CAGGACCTTGACTTTCTGCATGAAGTGCAATTTCTCAAGCCTTTCCATGATGACCAATTCACATTTCTGTaGGAAAAGCCCACACGCCAC +
Preference number: 4 (lower is better)
Translates to: QDLDFLHEVQFLKPFHDDQFTFL*EKPTRH
Trigger: GTGGCGTGTGGGCTTTTCCCACAGAAATGTGAATTG...GTCATCATGGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR CCA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCAGAGGTATGTGGCAGTaGGGTAAGAGAACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFRGMWQ*GKRTSL
Trigger: AAGGGAAGTTCTCTTACCCCACTGCCACATACCTCT...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
3UTR CAA 72 bp CAGAATCCTAAAGGTTTCCTAACTTTTCCAAATGATTaGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QNPKGFLTFPND*LGCLLPERASA
Trigger: AGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAGTTAGGAAACCTTTAGGATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCCACATTGATTCCAGATaGGAAACAACAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFHIDSR*ETTVPQ
Trigger: TTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTG...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCCTAAGAAAAATGTTCTaGGACCAGATGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFLRKMF*DQMQWL
Trigger: GAGCCACTGCATCTGGTCTCAGAACATTTTTCTTAG...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATATCTAAAGACAGGAAGTaGATTGTGAGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FTVISVGQSQQSYQTKLISKDRK*IVRRWQ
Trigger: CTGCCAGCGCCTCACAATTCACTTCCTGTCTTTAGA...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp ACCTCTCACCACTACATTTTCCCACACATTCCACTCACACTGACCATTGAAGAGCTTTCTCCTTTTACCTaGAAGCTCAAGCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: TSHHYIFPHIPLTLTIEELSPFT*KLKLSY
Trigger: ATAGCTCAGCTTGAGCTTTCAGGTAAAAGGAGAAAG...CTCTTCAATGGTCAGTGTGAGTGGAATGTGTGGGAAAATGTAGTGGTGAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTGCACAACCCCCATCCTaGTCTTCTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCAQPPS*SSPPSP
Trigger: AGGTGATGGTGGAGAAGAGCAGGATGGGGGTTGTGC...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTAGGACCTTGACTTTCTaGATGAAGTGCAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLRTLTF*MKCNFS
Trigger: TGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp ACCTCTCACCACTACATTTTCCCACACATTCCACTCACACTGACCATTGAAGAGCTTTTCCAAATGATTTaGTTGGATGTCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSHHYIFPHIPLTLTIEELFQMI*LDVSSL
Trigger: CAGGGAGGAGACATCCAAGCAAATCATTTGGAAAAG...CTCTTCAATGGTCAGTGTGAGTGGAATGTGTGGGAAAATGTAGTGGTGAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp AGGACCTTGACTTTCTGCATGAAGTGCAATTTCTCAAGCCTTTCCATGATGACTGAAGGGAAGTGGCTGTaGATTGCTGTGTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: RTLTFCMKCNFSSLSMMTEGKWL*IAVCPL
Trigger: TAAAGGACACACAGCAATGCACAGCCACTTCCCTTC...AGTCATCATGGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR GCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCAGTAAGGCCAGATCCTaGTTTCCATTCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFSKARS*FPFRLH
Trigger: ATGAAGCCTGAATGGAAAGCAGGATCTGGCCTTACT...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAGAATGTGGAGTGACTaGCAATGGGTATGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHRMWSD*QWVWGF
Trigger: GAAACCCCATACCCATTGGCAGTCACTCCACATTCT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTGCCCCATCTCCTTGCTaGTTCTTCTGGATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTAPSPC*FFWILV
Trigger: TACAAGAATCCAGAAGAAGCAGCAAGGAGATGGGGC...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTCATACAGCTTCTTaGCATACAGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ETLIEVDIRLKFSILGLDSHTAS*HTAAAP
Trigger: TGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACT...ATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTCAATTCACATTTCTGTaGGAAAAGCCCACACGCCAC +
Preference number: 4 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCQFTFL*EKPTRH
Trigger: GTGGCGTGTGGGCTTTTCCCACAGAAATGTGAATTG...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTAATATGGGAATAGACTaGTCCTTGCTGAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTNMGID*SLLKWG
Trigger: GCCCCACTTCAGCAAGGACCAGTCTATTCCCATATT...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAATATGGGAATAGACTaGTCCTTGCTGAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ETLIEVDIRLKFSILGLDNMGID*SLLKWG
Trigger: GCCCCACTTCAGCAAGGACCAGTCTATTCCCATATT...ATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTGCTGGGGAAGGGAAGTaGCTGTGCATTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITAGEGK*LCIAVC
Trigger: ACACACAGCAATGCACAGCCACTTCCCTTCCCCAGC...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTCACAGTGATATCTGTTaGACAGAGTCAGCAATCCTA +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIHSDIC*TESAIL
Trigger: TAGGATTGCTGACTCTGTCCAACAGATATCACTGTG...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp AAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGACACAGTGATATCTGTTaGACAGAGTCAGCAATCCTA +
Preference number: 4 (lower is better)
Translates to: KFSILGLDSVLELRFQIGHSDIC*TESAIL
Trigger: TAGGATTGCTGACTCTGTCCAACAGATATCACTGTG...TCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGAACTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATCCTGTGGAGACAGGTaGATTTCCCCTTTAATGAGG +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTSCGDR*ISPLMR
Trigger: CCTCATTAAAGGGGAAATCCACCTGTCTCCACAGGA...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATAAATCAAATTAGCCTGTaGTCCCAGCTACCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYINQISL*SQLPQR
Trigger: CCTCTGGGGTAGCTGGGACCACAGGCTAATTTGATT...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTTACCTGAAAGCTCAAGCTGAGCTATTGGATAGGACAGTCTGGATTAGCACTTTGGATAGGACAGTCTaGATTAGCACTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: FYLKAQAELLDRTVWISTLDRTV*ISTSHT
Trigger: GGTGTGGGAAGTGCTAATCCAGACTGTCCTATCCAA...AGTGCTAATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGCTTTCAGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATAAAGTGTTTTACAGCCTaGCCCAGTCTAGCCCACATC +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYIKCFTA*PSLAHI
Trigger: GATGTGGGCTAGACTGGGCCAGGCTGTAAAACACTT...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACCTTTCCATGATGACTaGCAGCAAGATGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYIPFHDD*QQDAVA
Trigger: TGCGACAGCATCTTGCTGCCAGTCATCATGGAAAGG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459894.6
3UTR CAA 72 bp AGTCAGCAATCCTACCAGACAAAACTCATACACACATaGATTCCAGATGAGAAACAACAGTCCCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQQSYQTKLIHT*IPDEKQQSPKE
Trigger: CTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp AGGACCTTGACTTTCTGCATGAAGTGCAATTTCTCAAGCCTTTCCATGATGACTCACATTGATTCCAGATaGGAAACAACAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RTLTFCMKCNFSSLSMMTHIDSR*ETTVPQ
Trigger: TTGGGGGACTGTTGTTTCTCATCTGGAATCAATGTG...AGTCATCATGGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR TCA 90 bp CAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTACCCTTTTTCACTTAACTCATACACACATTaGTTCCAGATGAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: QGLRKQLEDIGLCYPFSLNSYTH*FQMRNN
Trigger: GTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTT...AAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp CAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTACCCTTTTTCACTTAAACATTGTATGTTCTaGAAGAACATCAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QGLRKQLEDIGLCYPFSLKHCMF*KNISQE
Trigger: CTCCTGACTGATGTTCTTTCAGAACATACAATGTTT...AAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATAACATTCCACTCACACTaGCCATTGAAGAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYITFHSH*PLKRCP
Trigger: TGGGCATCTCTTCAATGGTCAGTGTGAGTGGAATGT...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTTGCTGCCCTGCAAGTTaGCAATTCTTCCTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCCCPAS*QFFLSN
Trigger: ATTTGAGAGGAAGAATTGTCAACTTGCAGGGCAGCA...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAGTGATGTTTAGGAAGTaGTTCACTCTCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIVMFRK*FTLPRK
Trigger: CTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCAC...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTATTTTAGGCTTTGTATaGCACATAGGTAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIILGFV*HIGRVS
Trigger: AGAGACCCTACCTATGTGGCATACAAAGCCTAAAAT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACAATTCACATTTCTGTaGGAAAAGCCCACACGCCAC +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYIQFTFL*EKPTRH
Trigger: GTGGCGTGTGGGCTTTTCCCACAGAAATGTGAATTG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTCAAATTAGCCAAGCATaGTGGTGCACACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCQISQA*WCTLVV
Trigger: GACTACAAGTGTGCACCACCATGCTTGGCTAATTTG...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTGATCATCCCAGGAGCTaGCATGGTGATCCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITDHPRS*HGDPRN
Trigger: ATTTCTCGGATCACCATGTCAGCTCCTGGGATGATC...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATACTCTTTGGTCCTGGTTaGTTTCCTCTTAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYILFGPG*FPLRRF
Trigger: GAACCTTCTAAGAGGAAATCAACCAGGACCAAAGAG...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp ATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGAAACTGGCAATTATTCAATTCACAGTaGTATCTGTTGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: ILGLDSVLELRFQIGNWQLFNSQ*YLLDRV
Trigger: GACTCTGTCCAACAGATATCACTGTGAATTGAATAA...TTGCCAGTTTCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTAGCATCACCGGGCAATaGCTAGAAATGCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCSITGQ*LEMHVL
Trigger: GAGAACGTGCATTTCTAGTCATTGCCCGGTGATGCT...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTAGGTTGAGGCTGCAATaGGCAGTGATTGCACTACTG +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCRLRLQ*AVIALL
Trigger: CAGTAGTGCAATCACTGCTCATTGCAGCCTCAACCT...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp ACATTGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGACCTTGACTTTCTaGATGAAGTGCAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: TLIPDEKQQSPKELEKSPRTLTF*MKCNFS
Trigger: TGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT...AGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACTTCTTAGCTTCCAATTaGACAAAAACAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHFLASN*TKTGGR
Trigger: CCTGCCACCTGTTTTTGTGCAATTGGAAGCTAAGAA...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATCAGAGTGACAGAATCTaGCAATGGATCCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: ICWTESAILPDKTHTHIDQSDRI*QWILQS
Trigger: AGATTGCAGGATCCATTGCCAGATTCTGTCACTCTG...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp ACCTCTCACCACTACATTTTCCCACACATTCCACTCACACTGACCATTGAAGAGAAGGTCTCTAATTCCTaGCCTCAAAAAGTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: TSHHYIFPHIPLTLTIEEKVSNS*PQKVVS
Trigger: ACTTACAACTTTTTGAGGCCAGGAATTAGAGACCTT...CTCTTCAATGGTCAGTGTGAGTGGAATGTGTGGGAAAATGTAGTGGTGAGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTCCTTGCTGCTTCTTCTaGATTCTTGTAACACTTATA +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIPCCFF*ILVTLI
Trigger: TATAAGTGTTACAAGAATCCAGAAGAAGCAGCAAGG...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATCACACATAAAACTGTaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTSHIKL*TCNPSY
Trigger: GTAGCTGGGATTACAGGTCCACAGTTTTATGTGTGA...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480358.6
3UTR CAA 72 bp TATAGAGAAGATTCCAAGAATAGGTTCAGACATGATTaGAAGAACCATGTAACTCTGCTGCCTTGCACGGTC +
Preference number: 4 (lower is better)
Translates to: YREDSKNRFRHD*KNHVTLLPCTV
Trigger: GACCGTGCAAGGCAGCAGAGTTACATGGTTCTTCAAATCATGTCTGAACCTATTCTTGGAATCTTCTCTATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCTTTAGAGACCCTTATTaGAGTAGACATAAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFFRDPY*SRHKAQ
Trigger: TTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAA...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp GAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTGTCTTGGAGTTTAGAGACCCTTATTaGAGTAGACATAAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: EVDIRLKFSILGLDSVLEFRDPY*SRHKAQ
Trigger: TTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAA...CTCCAAGACACTATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTAAAATCAAGTTGCAGTaGATTCCTTGGCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCKIKLQ*IPWPRG
Trigger: TCCCCGAGGCCAAGGAATTCACTGCAACTTGATTTT...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTGGTCAGCCTCCATCTTaGTCACACATAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLGQPPS*SHIKLW
Trigger: CCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACC...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAACTTTCTGCATGAAGTaGAATTTCTCAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTTFCMK*NFSSLS
Trigger: GGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGT...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTAAATCCATCATCCATTaGTTCAATCCATGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIKSIIH*FNPCSS
Trigger: AGAAGAACATGGATTGAAGCAATGGATGATGGATTT...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp ACTTTAGCAGTCAATTTCCTCTCAAAAACCTGTCAAAGTGTTTTACAGCCTGGCTCCTTTAAGGCTCTTTaGTCCTGGTTGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TLAVNFLSKTCQSVLQPGSFKAL*SWLISS
Trigger: AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGA...GCCAGGCTGTAAAACACTTTGACAGGTTTTTGAGAGGAAATTGACTGCTAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTTCCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGCATATGCTACAACATaGATGAACCTTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: FPLRSNQPVPGCKYEAFIAYATT*MNLENI
Trigger: AATGTTTTCAAGGTTCATCCATGTTGTAGCATATGC...AATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTCTAGCTAAATACAAATaGCTTCCCTGCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLLAKYK*LPCCPA
Trigger: TGCAGGGCAGCAGGGAAGCCATTTGTATTTAGCTAG...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACTTTAGAGACCCTTATTaGAGTAGACATAAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHFRDPY*SRHKAQ
Trigger: TTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAA...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAAACTCATACACACATTaGTTCCAGATGAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTNSYTH*FQMRNN
Trigger: GTTGTTTCTCATCTGGAATCAATGTGTGTATGAGTT...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp TTCCTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTGATAGTACCTTTATCTaGGGCATAGTGCTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: FLSNFRHTLQPYHIKPNIDSTFI*GIVLRH
Trigger: GTGACGAAGCACTATGCCTCAGATAAAGGTACTATC...AATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp AGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGTTAATGCCTATATAACTTTCTGCATGAAGTaGAATTTCTCAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: REAARKLYPLKCVVNAYITFCMK*NFSSLS
Trigger: GGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGT...TATATAGGCATTAACCACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR TCA 90 bp CATTTAGAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCTTATTCAATTCACAGTaGTATCTGTTGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: HLETLIEVDIRLKFSILGLFNSQ*YLLDRV
Trigger: GACTCTGTCCAACAGATATCACTGTGAATTGAATAA...GCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTCTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTTCTGGCAATGGATCCTaGAATCTGTGCTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCSGNGS*NLCFNK
Trigger: CTTGTTAAAGCACAGATTGCAGGATCCATTGCCAGA...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATCAGCTAGAATTACATaGGTAAAAGTTTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTSARIT*VKVSIA
Trigger: AGCAATGGAAACTTTTACCCATGTAATTCTAGCTGA...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACACCAAATTATTTTCATaGCACAAGGTCTCTAATTCC +
Preference number: 4 (lower is better)
Translates to: SDICWTESAILPDKTHTHTKLFS*HKVSNS
Trigger: GGAATTAGAGACCTTGTGCCATGAAAATAATTTGGT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR GCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTAGGACCTTGACTTTCTaGATGAAGTGCAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCRTLTF*MKCNFS
Trigger: TGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CCA 90 bp ACTTTAGCAGTCAATTTCCTCTCAAAAACCTGTCAAAGTGTTTTACAGCCTGGCAGAGGAAGTTGTTCTTaGCTTAAGTGTTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TLAVNFLSKTCQSVLQPGRGSCS*LKCWKN
Trigger: ATTTTTCCAACACTTAAGCCAAGAACAACTTCCTCT...GCCAGGCTGTAAAACACTTTGACAGGTTTTTGAGAGGAAATTGACTGCTAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR TCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTTTATTCAATTCACAGTaGTATCTGTTGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCLFNSQ*YLLDRV
Trigger: GACTCTGTCCAACAGATATCACTGTGAATTGAATAA...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR GCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTTTTAGTAACCTTAACTaGCTCTTATTCAACATCCCA +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCFSNLN*LLFNIP
Trigger: TGGGATGTTGAATAAGAGGCAGTTAAGGTTACTAAA...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CCA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTTCAGCTAGAATTACATaGGTAAAAGTTTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCSARIT*VKVSIA
Trigger: AGCAATGGAAACTTTTACCCATGTAATTCTAGCTGA...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS CCA 90 bp ATCTGCAGCCCCAGGGCGCACTTCGCGCCACGTGGCTTCTGCAGGTaGAAGTCCAGCCCGCGCTGCAGCCCCGCCTGGGCAGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: ICSPRAHFAPRGFCR*KSSPRCSPAWAVRT
Trigger: TGTCCTGACTGCCCAGGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCAGAAGCCACGTGGCGCGAAGTGCGCCCTGGGGCTGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS GCA 90 bp CACTTCGCGCCACGTGGCTTCTGCAGGTGGAAGTCCAGCCCGCGCTaGAGCCCCGCCTGGGCAGTCAGGACAGCAATCTCAGCACCCACC +
Preference number: 5 (lower is better)
Translates to: HFAPRGFCRWKSSPR*SPAWAVRTAISAPT
Trigger: GGTGGGTGCTGAGATTGCTGTCCTGACTGCCCAGGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCAGAAGCCACGTGGCGCGAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS CCA 90 bp CGTGGCTTCTGCAGGTGGAAGTCCAGCCCGCGCTGCAGCCCCGCCTaGGCAGTCAGGACAGCAATCTCAGCACCCACCCGAGATGTGGGG +
Preference number: 5 (lower is better)
Translates to: RGFCRWKSSPRCSPA*AVRTAISAPTRDVG
Trigger: CCCCACATCTCGGGTGGGTGCTGAGATTGCTGTCCTGACTGCCCAGGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCAGAAGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS TCA 90 bp CTCCAGCCTGGTCCCGGGACAAATGCCACCAGTTACAGCCCGCCTTaGAAACTGGCCCGGGTGAGAGGAGGACCTGGGCTGGGGAACTGC +
Preference number: 5 (lower is better)
Translates to: LQPGPGTNATSYSPP*KLARVRGGPGLGNC
Trigger: GCAGTTCCCCAGCCCAGGTCCTCCTCTCACCCGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602831.5
CDS CCA 90 bp CCGCCTGGGCAGTCAGGACAGCAATCTCAGCACCCACCCGAGATGTaGGGATTGGAGGTAGACAGGGCGAGCGCCATTGTCCCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PPGQSGQQSQHPPEM*GLEVDRASAIVPRP
Trigger: GGGCCTTGGGACAATGGCGCTCGCCCTGTCTACCTCCAATCCCCACATCTCGGGTGGGTGCTGAGATTGCTGTCCTGACTGCCCAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS GCA 90 bp CCGAGTCATACAGCTTCTTGGCATACAGCAGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCATCCTTGGCCCAGTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PSHTASWHTAAAPLG*LGAQPPSLAQSSSR
Trigger: GCGGGAGCTGGACTGGGCCAAGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CAA 90 bp ATGCCGCCAGGAAGCTGGAAAGACATGCGCCCGATGACATTCATCTTCTCCCCAGCACAACCCCCATCCTaGGCCCAGTCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: MPPGSWKDMRPMTFIFSPAQPPS*AQSSSR
Trigger: GCGGGAGCTGGACTGGGCCAAGGATGGGGGTTGTGC...TGGGGAGAAGATGAATGTCATCGGGCGCATGTCTTTCCAGCTTCCTGGCGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CAA 90 bp ACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGAACTGGAGCATGCCGAGATCGCACCGTaGCACTCCAGCCTGGTCCCG +
Preference number: 5 (lower is better)
Translates to: TFPTPGPKPSSIAVELEHAEIAP*HSSLVP
Trigger: CGGGACCAGGCTGGAGTGCAACGGTGCGATCTCGGC...ATGCTCCAGTTCTACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS TCA 90 bp CCCAGTCCAGCTCCCGCTCAGATACAAAGACAGTGCGGGGGTCCGTaGTGTTTAGGAAGTGCTTCACTCTCCCCAGGAAGGTGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: PSPAPAQIQRQCGGP*CLGSASLSPGRCAG
Trigger: ACCAGCGCACCTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCACGGACCCCCGCACTGTCTTTGTATCTGAGCGGGAGCTGGACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
ENST00000602287.5
ENST00000602439.5
ENST00000602544.5
ENST00000602660.1
ENST00000602670.1
ENST00000602764.5
ENST00000602785.5
ENST00000602831.5
ENST00000602868.1
CDS CCA 90 bp TTGGAGGTAGACAGGGCGAGCGCCATTGTCCCAAGGCCCCTTACCTaGTCCCGGGACAAATGCCACCAGTTACAGCCCGCCTTGAAAACT +
Preference number: 5 (lower is better)
Translates to: LEVDRASAIVPRPLT*SRDKCHQLQPALKT
Trigger: AGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGGTAAGGGGCCTTGGGACAATGGCGCTCGCCCTGTCTACCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS-3UTR CAA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTCAGGCCTTGTaGGCAAAGGGGAAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDIGLQAL*AKGKED
Trigger: GTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGCC...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGGCCGAGATCGCACCGTaGCACTCCAGCCTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGAEIAP*HSSLGN
Trigger: ATTGCCCAGGCTGGAGTGCAACGGTGCGATCTCGGC...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480358.6
CDS CCA 90 bp AAAGACATGCGCCCGATGACATTCATCTTCTCCCCAGTGTCGGGGTaGAAGGCCGAGTCATACAGCTTCTTGGCATACAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KDMRPMTFIFSPVSG*KAESYSFLAYSSCS
Trigger: GGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGGCCTTCCACCCCGACACTGGGGAGAAGATGAATGTCATCGGGCGCATGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
ENST00000602287.5
ENST00000602439.5
ENST00000602544.5
ENST00000602660.1
ENST00000602670.1
ENST00000602764.5
ENST00000602785.5
ENST00000602831.5
ENST00000602868.1
CDS-3UTR CAA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTAAGTCCCCCAAGGAGCTaGAGAAATCACCTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLSPPRS*RNHLGQ
Trigger: CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACT...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS TCA 90 bp GAAGAAGATGACTGTCCCCTAAATCAAAGCCCACCACAGAGGACCTaGGCACGTCCCACTGTTGCAGACTGCCTGCTCTCACCAGCTACT +
Preference number: 5 (lower is better)
Translates to: EEDDCPLNQSPPQRT*ARPTVADCLLSPAT
Trigger: AGTAGCTGGTGAGAGCAGGCAGTCTGCAACAGTGGGACGTGCTCAGGTCCTCTGTGGTGGGCTTTGATTTAGGGGACAGTCATCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602868.1
CDS-3UTR CAA 90 bp CACATTCCCAACACCCGGCCCAAAGCCCAGCTCAATAGCTGTAGAACTGGAGCAGAGTCATACAGCTTCTaGGCATACAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HIPNTRPKAQLNSCRTGAESYSF*AYSSCS
Trigger: GGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTC...TGCTCCAGTTCTACAGCTATTGAGCTGGGCTTTGGGCCGGGTGTTGGGAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CAA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGGGCCTTCAGGCCTTGTaGGCAAAGGGGAAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQGLQAL*AKGKED
Trigger: GTCCTCCTTCCCCTTTGCCAACAAGGCCTGAAGGCC...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGACAAACACAGGGGATTTaGCCCCAACTTCCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGQTQGI*PQLPFL
Trigger: GAGAAAGGGAAGTTGGGGCAAAATCCCCTGTGTTTG...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp TCTAGGGCAACACAGCTCCCATTCTGGGAGATCTGGAGCTTCCTGTGGAGACAGAGGCATGAGGATTGCTaGAGGTCAGGGGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SRATQLPFWEIWSFLWRQRHEDC*RSGVQD
Trigger: GTCTTGAACCCCTGACCTCAAGCAATCCTCATGCCT...CTGTCTCCACAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGTTGCCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp ATTTGCTTGGATGTCTCCTCCCTGAGAGGGCCTCAGCTTCTGGTCTCCAGGGGAAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: ICLDVSSLRGPQLLVSRGRSASI*LTHKTV
Trigger: CACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCT...TCCCCTGGAGACCAGAAGCTGAGGCCCTCTCAGGGAGGAGACATCCAAGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GAGCTCCTTGACGGGAGGTTACTGAAGCCTTCACATTCCCAACACCCGGCCCAAAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: ELLDGRLLKPSHSQHPAQRSASI*LTHKTV
Trigger: CACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCT...TTGGGCCGGGTGTTGGGAATGTGAAGGCTTCAGTAACCTCCCGTCAAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602544.5
ENST00000602670.1
CDS TCA 90 bp GATCAAGGTAGCCAAAGACCCCAGAAGGTCAGACACAAAGACCACTaGGACAGGCAAGGATTAAGGTCAAGGCTGCCTAGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: DQGSQRPQKVRHKDH*DRQGLRSRLPRASW
Trigger: CCAGCTTGCTCTAGGCAGCCTTGACCTTAATCCTTGCCTGTCTCAGTGGTCTTTGTGTCTGACCTTCTGGGGTCTTTGGCTACCTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602439.5
CDS-3UTR CAA 90 bp AAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAAGCTGGGGAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: KQQSPKELEKSPRAAKLGRSASI*LTHKTV
Trigger: CACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCT...CCCCAGCTTGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCGCATCATGGGGATATaGACACAGTTAGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQRIMGI*TQLAAA
Trigger: GGCTGCGGCTAACTGTGTCAATATCCCCATGATGCG...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369893.10
ENST00000459894.6
CDS-3UTR CAA 90 bp TCTAGGGCAACACAGCTCCCATTCTGGGAGATCTGGAGCTTCCTGTGGAGACAGTCTCCATACTTGGCCTaGATAGTGTCTTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SRATQLPFWEIWSFLWRQSPYLA*IVSWSF
Trigger: GAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGA...CTGTCTCCACAGGAAGCTCCAGATCTCCCAGAATGGGAGCTGTGTTGCCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp GTGCACGTAGCTAAGGAGGAGCTGGTGAATATGGGAATAGACTGGTCCTTGCTGTGTAACTCTGCTGCCTaGCACGGTCCCCTTTTTAGC +
Preference number: 5 (lower is better)
Translates to: VHVAKEELVNMGIDWSLLCNSAA*HGPLFS
Trigger: GCTAAAAAGGGGACCGTGCAAGGCAGCAGAGTTACA...CAGCAAGGACCAGTCTATTCCCATATTCACCAGCTCCTCCTTAGCTACGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CCCCTGAGGTCCAATCAACCAGTACCAGGGTGTAAGTATGAGGCATTCATTGTCAGCCACTGCGCCCGGTaGATGCATGTGCTTAAGAAC +
Preference number: 5 (lower is better)
Translates to: PLRSNQPVPGCKYEAFIVSHCAR*MHVLKN
Trigger: GTTCTTAAGCACATGCATCAACCGGGCGCAGTGGCT...GACAATGAATGCCTCATACTTACACCCTGGTACTGGTTGATTGGACCTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp GTAGAACTGGAGCATGAAGCCCGTGATGATCATGCCGCCAGGAAGCTGGAAAGAAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: VELEHEARDDHAARKLERRSASI*LTHKTV
Trigger: CACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCT...TCTTTCCAGCTTCCTGGCGGCATGATCATCACGGGCTTCATGCTCCAGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS-3UTR CAA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACACGGAGTCGCCCAGGTaGGAGTGCAGTGGCGCAATC +
Preference number: 5 (lower is better)
Translates to: SDICWTESAILPDKTHTHTESPR*ECSGAI
Trigger: GATTGCGCCACTGCACTCCAACCTGGGCGACTCCGT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS TCA 90 bp GACCCCTCAGTTCCTCTCACAGGGTACATCATGTCCAGCTTTCAGTaGAAAATTACAAGGCATACTGGTCCCGGGACAAATGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: DPSVPLTGYIMSSFQ*KITRHTGPGTNATS
Trigger: ACTGGTGGCATTTGTCCCGGGACCAGTATGCCTTGTAATTTTTCACTGAAAGCTGGACATGATGTACCCTGTGAGAGGAACTGAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR CAA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCAAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTG +
Preference number: 5 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPRSASI*LTHKTV
Trigger: CACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCT...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTGAGTCATACAGCTTCTaGGCATACAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLESYSF*AYSSCS
Trigger: GGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTC...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CCTCAGCTTCTGGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTACTTTTCCAAATGATTaGCTTGGATGTCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PQLLVSRGQGLRKQLEDITFPND*LGCLLP
Trigger: AGGGAGGAGACATCCAAGCAAATCATTTGGAAAAGT...AATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACCAGAAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CCTAATGGGCTGAGGAAGGGAGGCAGCCAGGAAATTATACCCATTAAAGTGTGTGGCCTTGATAGTGTCTaGGAGCTTCGGTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: PNGLRKGGSQEIIPIKVCGLDSV*ELRFQI
Trigger: TATCTGGAACCGAAGCTCCAAGACACTATCAAGGCC...ACACACTTTAATGGGTATAATTTCCTGGCTGCCTCCCTTCCTCAGCCCATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GGTCTCCAGGGGACAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTAAGGTTCAGACATGATTaGAAGAACCATGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: GLQGTGVEEAARRHWPLLRFRHD*KNHVTL
Trigger: CAGAGTTACATGGTTCTTCAAATCATGTCTGAACCT...TAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTGTCCCCTGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGCCACACACCAGTCTTTCTTaGGTGTTTAACCTAATGGGC +
Preference number: 5 (lower is better)
Translates to: QMRNNSPPRSLRNHLGQPHTSLS*VFNLMG
Trigger: GCCCATTAGGTTAAACACCAAAGAAAGACTGGTGTG...TGGCTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp TTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTAGGGCAGAACATCAGTCAGGAGTaGTTTCCAAGCTCTACTGGC +
Preference number: 5 (lower is better)
Translates to: FQMRNNSPPRSLRNHLGQNISQE*FPSSTG
Trigger: GCCAGTAGAGCTTGGAAACAACTCCTGACTGATGTT...CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp TCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGTGTCTGCTGCCCTGCAAGTaGACAATTCTTCCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SDNFKVSSTPKEAVRAGCLLPCK*TILPLK
Trigger: TTTGAGAGGAAGAATTGTCAACTTGCAGGGCAGCAG...ACACCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS CCA 90 bp AGGGTACATCATGTCCAGCTTTCAGTGAAAAATTACAAGGCATACTaGTCCCGGGACAAATGCCACCAGTTACAGCCCGCCTTGAAAACT +
Preference number: 5 (lower is better)
Translates to: RVHHVQLSVKNYKAY*SRDKCHQLQPALKT
Trigger: AGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGTATGCCTTGTAATTTTTCACTGAAAGCTGGACATGATGTACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR CAA 90 bp TCCAAGCTGTACTGTAACTGTTTACTTCTTGGTCTCCTCAACAAAACTGGGAGCGAGTCATACAGCTTCTaGGCATACAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SKLYCNCLLLGLLNKTGSESYSF*AYSSCS
Trigger: GGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTC...GCTCCCAGTTTTGTTGAGGAGACCAAGAAGTAAACAGTTACAGTACAGCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602544.5
CDS-3UTR CAA 90 bp AGGACCTTGACTTTCTGCATGAAGTGCAATTTCTCAAGCCTTTCCATGATGACTCGCATCATGGGGATATaGACACAGTTAGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: RTLTFCMKCNFSSLSMMTRIMGI*TQLAAA
Trigger: GGCTGCGGCTAACTGTGTCAATATCCCCATGATGCG...AGTCATCATGGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR CAA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTTCTCCATACTTGGCCTaGATAGTGTCTTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: AVHCCVSFKALWSWLISSSPYLA*IVSWSF
Trigger: GAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGA...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GCAAAGGGGAAGGAGGACACAAGTGTGCACGTAGCTAAGGAGGAGCTGGTGAATAGAAGACATTGGCCTTaGCTACCCTTTTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: AKGKEDTSVHVAKEELVNRRHWP*LPFFTF
Trigger: AAAAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCT...ATTCACCAGCTCCTCCTTAGCTACGTGCACACTTGTGTCCTCCTTCCCCTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp ACATTGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTTGTAACTCTGCTGCCTaGCACGGTCCCCTTTTTAGC +
Preference number: 5 (lower is better)
Translates to: TLIPDEKQQSPKELEKSPCNSAA*HGPLFS
Trigger: GCTAAAAAGGGGACCGTGCAAGGCAGCAGAGTTACA...AGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATAGTCCCCCAAGGAGCTaGAGAAATCACCTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ETLIEVDIRLKFSILGLDSPPRS*RNHLGQ
Trigger: CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACT...ATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGAAACCCCAATTCAGTTaGGCAAACACAGGGGATTTT +
Preference number: 5 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGKPQFS*ANTGDF
Trigger: AAAATCCCCTGTGTTTGCCAAACTGAATTGGGGTTT...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTGAGTCATACAGCTTCTaGGCATACAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCESYSF*AYSSCS
Trigger: GGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTC...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp CAGGGGTTGAGGAAGCAGCTAGAAGACATTGGCCTTTGCTACCCTTTTTCACTTTCAAGTTCTCCATACTaGGCCTTGATAGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: QGLRKQLEDIGLCYPFSLSSSPY*ALIVSW
Trigger: CCAAGACACTATCAAGGCCAAGTATGGAGAACTTGA...AAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCTAGCTGCTTCCTCAACCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GGTGAATATGGGAATAGACTGGTCCTTGCTGAAGTGGGGCATTTAGAGACCCTTCACACCAGTCTTTCTTaGGTGTTTAACCTAATGGGC +
Preference number: 5 (lower is better)
Translates to: GEYGNRLVLAEVGHLETLHTSLS*VFNLMG
Trigger: GCCCATTAGGTTAAACACCAAAGAAAGACTGGTGTG...AAGGGTCTCTAAATGCCCCACTTCAGCAAGGACCAGTCTATTCCCATATTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAAGCAGAAGAATCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SDICWTESAILPDKTHTHKQKNR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCTT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp ACATTGATTCCAGATGAGAAACAACAGTCCCCCAAGGAGCTTGAGAAATCACCTACCAGGATGCCTCTCTaGGTCTCAACTGCCCAAATA +
Preference number: 5 (lower is better)
Translates to: TLIPDEKQQSPKELEKSPTRMPL*VSTAQI
Trigger: TATTTGGGCAGTTGAGACCAAGAGAGGCATCCTGGT...AGGTGATTTCTCAAGCTCCTTGGGGGACTGTTGTTTCTCATCTGGAATCAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAGAGTCATACAGCTTCTaGGCATACAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIESYSF*AYSSCS
Trigger: GGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTC...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATAGGGCGGCGCTTTCTTaGTCAACATGTTCATGCCCA +
Preference number: 5 (lower is better)
Translates to: ICWTESAILPDKTHTHIDRAALS*STCSCP
Trigger: TGGGCATGAACATGTTGACAAAGAAAGCGCCGCCCT...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp GTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAGGCCTTGATAGTGTCTaGGAGCTTCGGTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: VISVGQSQQSYQTKLIHTGLDSV*ELRFQI
Trigger: TATCTGGAACCGAAGCTCCAAGACACTATCAAGGCC...TGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GAGACCCTTATTGAAGTAGACATAAGGCTCAAGTTCTCCATACTTGGCCTTGATGGCCTTGATAGTGTCTaGGAGCTTCGGTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: ETLIEVDIRLKFSILGLDGLDSV*ELRFQI
Trigger: TATCTGGAACCGAAGCTCCAAGACACTATCAAGGCC...ATCAAGGCCAAGTATGGAGAACTTGAGCCTTATGTCTACTTCAATAAGGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CAGGACCTTGACTTTCTGCATGAAGTGCAATTTCTCAAGCCTTTCCATGATGACTCTCCATACTTGGCCTaGATAGTGTCTTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: QDLDFLHEVQFLKPFHDDSPYLA*IVSWSF
Trigger: GAAGCTCCAAGACACTATCAAGGCCAAGTATGGAGA...GTCATCATGGAAAGGCTTGAGAAATTGCACTTCATGCAGAAAGTCAAGGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS-3UTR CAA 90 bp ATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGAAACTGGCAATTCCAAATGATTTGCTaGGATGTCTCCTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: ILGLDSVLELRFQIGNWQFQMIC*DVSSLR
Trigger: TCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAA...TTGCCAGTTTCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GTGTCTGATAATTTCAAGGTTAGCAGCACTCCCAAAGAAGCTGTCCGGGCTGGGAAGGAAGGGGAAACATaGTATGTTCTGAAAGAACAT +
Preference number: 5 (lower is better)
Translates to: VSDNFKVSSTPKEAVRAGKEGET*YVLKEH
Trigger: ATGTTCTTTCAGAACATACAATGTTTCCCCTTCCTT...CCCAGCCCGGACAGCTTCTTTGGGAGTGCTGCTAACCTTGAAATTATCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp GGATTAGCACTTCCCACACCAAGGCCTTTTAGTAACCTTAACTGCCTCTTATTCGCTCAAGCTGAGCTATaGGATAGGACAGTCTGGATT +
Preference number: 5 (lower is better)
Translates to: GLALPTPRPFSNLNCLLFAQAEL*DRTVWI
Trigger: AATCCAGACTGTCCTATCCAATAGCTCAGCTTGAGC...GAATAAGAGGCAGTTAAGGTTACTAAAAGGCCTTGGTGTGGGAAGTGCTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp ATACTTGGCCTTGATAGTGTCTTGGAGCTTCGGTTCCAGATAGGAAACTGGCAAACTTTTCCAAATGATTaGCTTGGATGTCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: ILGLDSVLELRFQIGNWQTFPND*LGCLLP
Trigger: AGGGAGGAGACATCCAAGCAAATCATTTGGAAAAGT...TTGCCAGTTTCCTATCTGGAACCGAAGCTCCAAGACACTATCAAGGCCAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTAGTCCCCCAAGGAGCTaGAGAAATCACCTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLSPPRS*RNHLGQ
Trigger: CTGCCCTAGGTGATTTCTCAAGCTCCTTGGGGGACT...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTCCGAGAAATAACTACTaGGGTGATGCCTATGGCCGC +
Preference number: 5 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITPRNNY*GDAYGR
Trigger: GCGGCCATAGGCATCACCCAAGTAGTTATTTCTCGG...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTTGTAACTCTGCTGCCTaGCACGGTCCCCTTTTTAGC +
Preference number: 5 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCCNSAA*HGPLFS
Trigger: GCTAAAAAGGGGACCGTGCAAGGCAGCAGAGTTACA...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp GCTGTGCATTGCTGTGTGTCCTTTAAGGCTCTTTGGTCCTGGTTGATTTCCTCTTGGCAAATAACACAGTaGACTTTAGCAGTCAATTTC +
Preference number: 5 (lower is better)
Translates to: AVHCCVSFKALWSWLISSWQITQ*TLAVNF
Trigger: GAAATTGACTGCTAAAGTCAACTGTGTTATTTGCCA...AGAGGAAATCAACCAGGACCAAAGAGCCTTAAAGGACACACAGCAATGCACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATATCAAGTTCTCCATACTaGGCCTTGATAGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: FTVISVGQSQQSYQTKLISSSPY*ALIVSW
Trigger: CCAAGACACTATCAAGGCCAAGTATGGAGAACTTGA...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATATTCCAAATGATTTGCTaGGATGTCTCCTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIFQMIC*DVSSLR
Trigger: TCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAA...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTAGGTTCAGACATGATTaGAAGAACCATGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCRFRHD*KNHVTL
Trigger: CAGAGTTACATGGTTCTTCAAATCATGTCTGAACCT...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACAGGTTCAGACATGATTaGAAGAACCATGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: SDICWTESAILPDKTHTHRFRHD*KNHVTL
Trigger: CAGAGTTACATGGTTCTTCAAATCATGTCTGAACCT...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CCTGAACATTATAGCCACCACATACCTTCCAGACATTTCCAAAAGAGCAGTTGTAGGCTCAACCAGAGCTaGATCAATGTTGGTAAAATA +
Preference number: 5 (lower is better)
Translates to: PEHYSHHIPSRHFQKSSCRLNQS*INVGKI
Trigger: TATTTTACCAACATTGATCAAGCTCTGGTTGAGCCT...ACAACTGCTCTTTTGGAAATGTCTGGAAGGTATGTGGTGGCTATAATGTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp AACAGCCTCCAGGCATCAGACAAGTTCCCCTTATATAGTAGTTGTGATACCTTCTTAATGTCTTTTGTCTaGAAGCACAGCACTATTACC +
Preference number: 5 (lower is better)
Translates to: NSLQASDKFPLYSSCDTFLMSFV*KHSTIT
Trigger: GGTAATAGTGCTGTGCTTCAAGACAAAAGACATTAA...GAAGGTATCACAACTACTATATAAGGGGAACTTGTCTGATGCCTGGAGGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTTCAAGTTCTCCATACTaGGCCTTGATAGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCSSSPY*ALIVSW
Trigger: CCAAGACACTATCAAGGCCAAGTATGGAGAACTTGA...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp ATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACATTGATAGAAGACATTGGCCTTaGCTACCCTTTTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: ICWTESAILPDKTHTHIDRRHWP*LPFFTF
Trigger: AAAAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCT...ATCAATGTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp TTCACAGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATAAGAAGACATTGGCCTTaGCTACCCTTTTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: FTVISVGQSQQSYQTKLIRRHWP*LPFFTF
Trigger: AAAAGTGAAAAAGGGTAGCAAAGGCCAATGTCTTCT...TATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTTCCAAATGATTTGCTaGGATGTCTCCTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLFQMIC*DVSSLR
Trigger: TCTCAGGGAGGAGACATCCAAGCAAATCATTTGGAA...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp CTCTCAAATTTCCGCCACACACTACAACCATACCACATTAAACCAAATATTACTCACACCAGTCTTTCTTaGGTGTTTAACCTAATGGGC +
Preference number: 5 (lower is better)
Translates to: LSNFRHTLQPYHIKPNITHTSLS*VFNLMG
Trigger: GCCCATTAGGTTAAACACCAAAGAAAGACTGGTGTG...AGTAATATTTGGTTTAATGTGGTATGGTTGTAGTGTGTGGCGGAAATTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp AGTGATATCTGTTGGACAGAGTCAGCAATCCTACCAGACAAAACTCATACACACTTTCCAAAAGAGCAGTaGTCTATAAGAGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: SDICWTESAILPDKTHTHFPKEQ*SIREQE
Trigger: TTCCTGTTCTCTTATAGACAACTGCTCTTTTGGAAA...GTGTGTATGAGTTTTGTCTGGTAGGATTGCTGACTCTGTCCAACAGATATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS-3UTR CAA 90 bp AGAAGGTTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTACTTTTCCAAATGATTaGCTTGGATGTCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RRFQIKLPFPIQYTPVFLTFPND*LGCLLP
Trigger: AGGGAGGAGACATCCAAGCAAATCATTTGGAAAAGT...AAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAACCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
CDS-3UTR CAA 90 bp TTCCAAATAAAACTTCCCTTTCCTATTCAGTACACACCAGTCTTTCTTTGGTGTGAAATCCATCATCCATaGCTTCAATCCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: FQIKLPFPIQYTPVFLWCEIHHP*LQSMFF
Trigger: GAAGAACATGGATTGAAGCAATGGATGATGGATTTC...ACACCAAAGAAAGACTGGTGTGTACTGAATAGGAAAGGGAAGTTTTATTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS GCA 72 bp TGCAGCCCCAGGGCGCACTTCGCGCCACGTGGCTTCTaGAGGTGGAAGTCCAGCCCGCGCTGCAGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: CSPRAHFAPRGF*RWKSSPRCSPA
Trigger: GGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCAGAAGCCACGTGGCGCGAAGTGCGCCCTGGGGCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS CCA 72 bp CCCAGGGCGCACTTCGCGCCACGTGGCTTCTGCAGGTaGAAGTCCAGCCCGCGCTGCAGCCCCGCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: PRAHFAPRGFCR*KSSPRCSPAWA
Trigger: TGCCCAGGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCAGAAGCCACGTGGCGCGAAGTGCGCCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS CCA 72 bp TGCAGGTGGAAGTCCAGCCCGCGCTGCAGCCCCGCCTaGGCAGTCAGGACAGCAATCTCAGCACCCACCCGA +
Preference number: 6 (lower is better)
Translates to: CRWKSSPRCSPA*AVRTAISAPTR
Trigger: TCGGGTGGGTGCTGAGATTGCTGTCCTGACTGCCCAGGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS GCA 72 bp CCACGTGGCTTCTGCAGGTGGAAGTCCAGCCCGCGCTaGAGCCCCGCCTGGGCAGTCAGGACAGCAATCTCA +
Preference number: 6 (lower is better)
Translates to: PRGFCRWKSSPR*SPAWAVRTAIS
Trigger: TGAGATTGCTGTCCTGACTGCCCAGGCGGGGCTGCAGCGCGGGCTGGACTTCCACCTGCAGAAGCCACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS CCA 72 bp GACAGGGCGAGCGCCATTGTCCCAAGGCCCCTTACCTaGTCCCGGGACAAATGCCACCAGTTACAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: DRASAIVPRPLT*SRDKCHQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGGTAAGGGGCCTTGGGACAATGGCGCTCGCCCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS TCA 72 bp GGTCCCGGGACAAATGCCACCAGTTACAGCCCGCCTTaGAAACTGGCCCGGGTGAGAGGAGGACCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: GPGTNATSYSPP*KLARVRGGPGL
Trigger: CAGCCCAGGTCCTCCTCTCACCCGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602287.5
ENST00000602831.5
CDS CAA 90 bp ACTCCAGCCTGGTCCCGGGACAAATGCCACCAGTTACAGCCCGCCTaGAAAACTGGCCCGGGTGAGAGGAGGACCTGGGCTGGGGAACTG +
Preference number: 6 (lower is better)
Translates to: TPAWSRDKCHQLQPA*KTGPGERRTWAGEL
Trigger: CAGTTCCCCAGCCCAGGTCCTCCTCTCACCCGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGGCTGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602831.5
CDS CAA 90 bp TGCCCCCGCGTGGCCACCATGCTGCAGCGGCCCCAGACCATACCTTaGTCAACATGTTCATGCCCACAGCCGTGGCCACAGCAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: CPRVATMLQRPQTIP*STCSCPQPWPQQWL
Trigger: CAACCACTGCTGTGGCCACGGCTGTGGGCATGAACATGTTGACAAAGGTATGGTCTGGGGCCGCTGCAGCATGGTGGCCACGCGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602660.1
CDS CAA 90 bp GGGCAGTCAGGACAGCAATCTCAGCACCCACCCGAGATGTGGGGATaGGAGGTAGACAGGGCGAGCGCCATTGTCCCAAGGCCCCTTACC +
Preference number: 6 (lower is better)
Translates to: GQSGQQSQHPPEMWG*EVDRASAIVPRPLT
Trigger: GGTAAGGGGCCTTGGGACAATGGCGCTCGCCCTGTCTACCTCCAATCCCCACATCTCGGGTGGGTGCTGAGATTGCTGTCCTGACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS GCA 72 bp TCGCACCGTTGCACTCCAGCCTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCCTTGAAAACTGGCCCG +
Preference number: 6 (lower is better)
Translates to: SHRCTPAWSRDK*HQLQPALKTGP
Trigger: CGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGGCTGGAGTGCAACGGTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602831.5
CDS GCA 72 bp ACAGCTTCTTGGCATACAGCAGCTGCTCCACTTGGGTaGCTGGGGGCACAACCCCCATCCTTGGCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: TASWHTAAAPLG*LGAQPPSLAQS
Trigger: GGACTGGGCCAAGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS CAA 72 bp TGGTCCCGGGACAAATGCCACCAGTTACAGCCCGCCTaGAAAACTGGCCCGGGTGAGAGGAGGACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: WSRDKCHQLQPA*KTGPGERRTWA
Trigger: AGCCCAGGTCCTCCTCTCACCCGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602287.5
ENST00000602831.5
CDS CAA 90 bp GAAGGCCGAGTCATACAGCTTCTTGGCATACAGCAGCTGCTCCACTaGGGTGCCTGGGGGCACAACCCCCATCCTTGGCCCAGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: EGRVIQLLGIQQLLH*GAWGHNPHPWPSPA
Trigger: AGCTGGACTGGGCCAAGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS GCA 72 bp AAGCCCACCACAGAGGACCTGAGCACGTCCCACTGTTaGAGACTGCCTGCTCTCACCAGCTACTGGGCATCG +
Preference number: 6 (lower is better)
Translates to: KPTTEDLSTSHC*RLPALTSYWAS
Trigger: CGATGCCCAGTAGCTGGTGAGAGCAGGCAGTCTGCAACAGTGGGACGTGCTCAGGTCCTCTGTGGTGGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602868.1
CDS CCA 72 bp CAGTGTCGGGGTGGAAGGCCGAGTCATACAGCTTCTTaGCATACAGCAGCTGCTCCACTTGGGTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: QCRGGRPSHTAS*HTAAAPLGCLG
Trigger: CCCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGGCCTTCCACCCCGACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
ENST00000602287.5
ENST00000602439.5
ENST00000602544.5
ENST00000602660.1
ENST00000602670.1
ENST00000602764.5
ENST00000602785.5
ENST00000602831.5
ENST00000602868.1
CDS CAA 72 bp CCAGTGTCGGGGTGGAAGGCCGAGTCATACAGCTTCTaGGCATACAGCAGCTGCTCCACTTGGGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PVSGWKAESYSF*AYSSCSTWVPG
Trigger: CCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGGCCTTCCACCCCGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
ENST00000602287.5
ENST00000602439.5
ENST00000602544.5
ENST00000602660.1
ENST00000602670.1
ENST00000602764.5
ENST00000602785.5
ENST00000602831.5
ENST00000602868.1
CDS CAA 72 bp GGACAGCAATCTCAGCACCCACCCGAGATGTGGGGATaGGAGGTAGACAGGGCGAGCGCCATTGTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: GQQSQHPPEMWG*EVDRASAIVPR
Trigger: CCTTGGGACAATGGCGCTCGCCCTGTCTACCTCCAATCCCCACATCTCGGGTGGGTGCTGAGATTGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS CAA 72 bp GTCATACAGCTTCTTGGCATACAGCAGCTGCTCCACTaGGGTGCCTGGGGGCACAACCCCCATCCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: VIQLLGIQQLLH*GAWGHNPHPWP
Trigger: GGGCCAAGGATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602670.1
CDS GCA 72 bp AAGGCCGAGTCATACAGCTTCTTGGCATACAGCAGCTaGTCCACTTGGGTGCCTGGGGGCACAACCCCCATC +
Preference number: 6 (lower is better)
Translates to: KAESYSFLAYSS*STWVPGGTTPI
Trigger: GATGGGGGTTGTGCCCCCAGGCACCCAAGTGGAGCAGCTGCTGTATGCCAAGAAGCTGTATGACTCGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
ENST00000602287.5
ENST00000602439.5
ENST00000602544.5
ENST00000602660.1
ENST00000602670.1
ENST00000602764.5
ENST00000602785.5
ENST00000602831.5
ENST00000602868.1
CDS GCA 72 bp CAGCGGCCCCAGACCATACCTTTGTCAACATGTTCATaGCCACAGCCGTGGCCACAGCAGTGGTTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: QRPQTIPLSTCS*PQPWPQQWLWL
Trigger: CAGCCACAACCACTGCTGTGGCCACGGCTGTGGGCATGAACATGTTGACAAAGGTATGGTCTGGGGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602660.1
CDS CCA 72 bp CAGTCAGGACAGCAATCTCAGCACCCACCCGAGATGTaGGGATTGGAGGTAGACAGGGCGAGCGCCATTGTC +
Preference number: 6 (lower is better)
Translates to: QSGQQSQHPPEM*GLEVDRASAIV
Trigger: GACAATGGCGCTCGCCCTGTCTACCTCCAATCCCCACATCTCGGGTGGGTGCTGAGATTGCTGTCCTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602647.5
CDS TCA 72 bp AGACACGAGGACAGCCTGGGGTTCAGGTCTCCTACCTaGCTGATGTGGGGGAAGCCGCATTCCTGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: RHEDSLGFRSPT*LMWGKPHSCWC
Trigger: ACACCAACAGGAATGCGGCTTCCCCCACATCAGTCAGGTAGGAGACCTGAACCCCAGGCTGTCCTCGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602287.5
CDS TCA 72 bp ACGAGGACAGCCTGGGGTTCAGGTCTCCTACCTGACTaGTGTGGGGGAAGCCGCATTCCTGTTGGTGTAGTT +
Preference number: 6 (lower is better)
Translates to: TRTAWGSGLLPD*CGGSRIPVGVV
Trigger: AACTACACCAACAGGAATGCGGCTTCCCCCACATCAGTCAGGTAGGAGACCTGAACCCCAGGCTGTCCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602287.5
CDS TCA 72 bp GACTGTCCCCTAAATCAAAGCCCACCACAGAGGACCTaGGCACGTCCCACTGTTGCAGACTGCCTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: DCPLNQSPPQRT*ARPTVADCLLS
Trigger: TGAGAGCAGGCAGTCTGCAACAGTGGGACGTGCTCAGGTCCTCTGTGGTGGGCTTTGATTTAGGGGACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602868.1
CDS GCA 72 bp ACAAAGACAGTGCGGGGGTCCGTGATGTTTAGGAAGTaGTTCACTCTCCCCAGGAAGGTGCGCTGGTCCCAA +
Preference number: 6 (lower is better)
Translates to: TKTVRGSVMFRK*FTLPRKVRWSQ
Trigger: TTGGGACCAGCGCACCTTCCTGGGGAGAGTGAAGCACTTCCTAAACATCACGGACCCCCGCACTGTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000369893.10
ENST00000459894.6
ENST00000480358.6
ENST00000602287.5
ENST00000602439.5
ENST00000602544.5
ENST00000602660.1
ENST00000602670.1
ENST00000602764.5
ENST00000602785.5
ENST00000602831.5
ENST00000602868.1
CDS GCA 72 bp TCACACATAAAACTGTGGACCTGGTCCCGGGACAAATaGCACCAGTTACAGCCCGCCTTGAAAACTGGCCCG +
Preference number: 6 (lower is better)
Translates to: SHIKLWTWSRDK*HQLQPALKTGP
Trigger: CGGGCCAGTTTTCAAGGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGGTCCACAGTTTTATGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602287.5
CDS CAA 72 bp TCCCAGCTACTTGGGAGGCTAAGGCAGGAGAATCGTTaGAACCCGAGAGGTGGAGGTTGTGATGAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: SQLLGRLRQENR*NPRGGGCDEPR
Trigger: TCTCGGCTCATCACAACCTCCACCTCTCGGGTTCAAACGATTCTCCTGCCTTAGCCTCCCAAGTAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480358.6
ENST00000602647.5
ENST00000602670.1
ENST00000602785.5
ENST00000602831.5
CDS CAA 72 bp GCATCGATGTTAAAGCCAGACAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTGGACCTGGTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: ASMLKPDRSASI*LTHKTVDLVPG
Trigger: TCCCGGGACCAGGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369893.10
ENST00000602287.5
ENST00000602544.5
ENST00000602660.1
CDS TCA 72 bp AGCCAAAGACCCCAGAAGGTCAGACACAAAGACCACTaGGACAGGCAAGGATTAAGGTCAAGGCTGCCTAGA +
Preference number: 6 (lower is better)
Translates to: SQRPQKVRHKDH*DRQGLRSRLPR
Trigger: TCTAGGCAGCCTTGACCTTAATCCTTGCCTGTCTCAGTGGTCTTTGTGTCTGACCTTCTGGGGTCTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602439.5
CDS CCA 72 bp CATGTCCAGCTTTCAGTGAAAAATTACAAGGCATACTaGTCCCGGGACAAATGCCACCAGTTACAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: HVQLSVKNYKAY*SRDKCHQLQPA
Trigger: GGCGGGCTGTAACTGGTGGCATTTGTCCCGGGACCAGTATGCCTTGTAATTTTTCACTGAAAGCTGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS CAA 72 bp GCATCGATGTTAAAGCCAGACAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTGGACCCCTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: ASMLKPDRSASI*LTHKTVDPSVP
Trigger: AGGAACTGAGGGGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459894.6
CDS TCA 72 bp TTCCATGATGACTGGCAGCAAGATCATCCCAGGAGCTaGCATGGTGATCCGAGAAATAACTACTTGGGTGAT +
Preference number: 6 (lower is better)
Translates to: FHDDWQQDHPRS*HGDPRNNYLGD
Trigger: ATCACCCAAGTAGTTATTTCTCGGATCACCATGTCAGCTCCTGGGATGATCTTGCTGCCAGTCATCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369893.10
CDS CAA 72 bp GCATCGATGTTAAAGCCAGACAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTGGACCACTTTGGAACA +
Preference number: 6 (lower is better)
Translates to: ASMLKPDRSASI*LTHKTVDHFGT
Trigger: TGTTCCAAAGTGGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602764.5
CDS CAA 72 bp GCATCGATGTTAAAGCCAGACAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTGGACATCAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: ASMLKPDRSASI*LTHKTVDIRGR
Trigger: TCTTCCTCTGATGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602439.5
CDS CAA 72 bp GCATCGATGTTAAAGCCAGACAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTGGACCTAAGGGACAAA +
Preference number: 6 (lower is better)
Translates to: ASMLKPDRSASI*LTHKTVDLRDK
Trigger: TTTGTCCCTTAGGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602868.1
CDS CAA 72 bp GCATCGATGTTAAAGCCAGACAGGTCAGCCTCCATCTaGCTCACACATAAAACTGTGGACCTGAAATGCATT +
Preference number: 6 (lower is better)
Translates to: ASMLKPDRSASI*LTHKTVDLKCI
Trigger: AATGCATTTCAGGTCCACAGTTTTATGTGTGAGCAAGATGGAGGCTGACCTGTCTGGCTTTAACATCGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602785.5