Pregenerated sensors for SFTPD (Homo sapiens)
Ensembl gene IDs: ENSG00000133661Ensembl transcript IDs: ENST00000372292.8, ENST00000444384.3, ENST00000678361.1, ENST00000679234.1
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCGCCTGCGAGGCCTCTTaGCCCTGCCGAGCCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTACEAS*PCRALH Trigger: ATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGC...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCGGGTCCCCTGGCACCTaGACTTCCCTGGGGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTGSPGT*TSLGTH Trigger: ATGGGTCCCCAGGGAAGTCCAGGTGCCAGGGGACCC...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR TCA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCCTCCACACAGTCCTCTaGCCCGCCATCATCGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTLHTVL*PAIIVG Trigger: CCCAACGATGATGGCGGGTCAGAGGACTGTGTGGAG...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCATCGTTGGGCTCCCCTaGGGCCCAGTTGGAATAGAC | + |
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Preference number: 4 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTIVGLP*GPVGID Trigger: GTCTATTCCAACTGGGCCCCAGGGGAGCCCAACGAT...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCCTTTTGGGCCTGGCTTaGCCTGAGGTCCTATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTLLGLA*PEVLCS Trigger: GGAACATAGGACCTCAGGGCAAGCCAGGCCCAAAAG...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | GTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGGCCCCTGCCGAGCCCTaGATGCCTGGGGCACCTACT | + |
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Preference number: 4 (lower is better) Translates to: VTFLLGYWQHEGLSLDFWAPAEP*MPGAPT Trigger: AGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGC...CCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCTCCTGGCAAACCTaGGTCCCCCTTCTCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLSSWQT*VPLLAP Trigger: CGGGGCGAGAAGGGGGACCCAGGTTTGCCAGGAGCT...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACATCCCGGGGGTCCCCTaGCACCTGGACTTCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QMVTFLLGYWQHEGLSLDIPGVP*HLDFPG Trigger: CCCAGGGAAGTCCAGGTGCCAGGGGACCCCCGGGAT...GTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCCTGTGCCTCCGTAAATaGTTTTACAAAGCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTLCLRK*FYKACC Trigger: ACAGCAGGCTTTGTAAAACCATTTACGGAGGCACAG...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | TTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACGAGGCCTCTTGCCCCTaGCGAGCCCTGCATGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FLLGYWQHEGLSLDFWPNEASCP*RALHAW Trigger: CCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTC...GTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTACTCAGCGGCAGAGCGTaGAGAGGCCAACTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLLSGRA*RGQLST Trigger: GGTGGACAGTTGGCCTCTCCACGCTCTGCCGCTGAG...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTATTGTCCAGGCATCCCTaGTTGCCCTGCAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLLSRHP*LPCSSW Trigger: CCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAA...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | TTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTaGCCCACCCACCCCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: FLLGYWQHEGLSLDFWPNSWAKH*PTHPSW Trigger: CCAACTGGGGTGGGTGGGGCAGTGCTTGGCCCAGGA...GTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR TCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTACCACTGAGCTACACATaGCCAGGGTGCAAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLPLSYT*PGCKHW Trigger: CCAGTGCTTGCACCCTGGTCATGTGTAGCTCAGTGG...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR TCA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCCAGGCCACTCTCCACTaGGCTACACATGACCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSQATLH*ATHDQG Trigger: ACCCTGGTCATGTGTAGCTCAGTGGAGAGTGGCCTG...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | CAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTCCAGCAGACCCTGCTaGCCCTGTGTTTCCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QMVTFLLGYWQHEGLSLDSSRPC*PCVSRD Trigger: GTCCCTGGAAACACAGGGGCAGCAGGGTCTGCTGGA...GTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCATTGTCCCCTTTaGGCCCAACTGGGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLSHCPL*AQLGQL Trigger: AAGCTGGCCCAGTTGGGCCCAAAGGGGACAATGGCT...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCCACACCGGGAGGTCCTaGAGGTCCACTTGGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFHTGRS*RSTWPS Trigger: ACTGGGCCAAGTGGACCTCCAGGACCTCCCGGTGTG...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACCCCACCCACCCCAGTTaGCTCAGAACTCGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: QMVTFLLGYWQHEGLSLDPTHPS*LRTRRP Trigger: TGGTCTGCGAGTTCTGAGCCAACTGGGGTGGGTGGG...GTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCCATCCCTGCTTGCCCTaGAGCTCCTGGCAAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFHPCLP*SSWQTW Trigger: CCAGGTTTGCCAGGAGCTGCAGGGCAAGCAGGGATG...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACACCTTCTCTTCCAGCTaGACCAGGCACACCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FLLGYWQHEGLSLDFWPNTFSSS*TRHTGR Trigger: CCTCCCGGTGTGCCTGGTCCAGCTGGAAGAGAAGGT...GTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTTCTGGCCAAACTCCTaGGCCAAGCACTGCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFFWPNS*AKHCPT Trigger: GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAA...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR TCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCCTCCTGTGGGGTAGGTaGACTTGCCCTCTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFLLWGR*TCPLSW Trigger: CCAAGACAGAGGGCAAGTTCACCTACCCCACAGGAG...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | GCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTCCAGGGTGCAAGCACTaGGCATTGTTCTGTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: AQMVTFLLGYWQHEGLSLPGCKH*ALFCGS Trigger: ACTCCCACAGAACAATGCCCAGTGCTTGCACCCTGG...AAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTTCTCCTTTTGGGCCTaGCTTGCCCTGAGGTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSFSFWA*LALRSY Trigger: ATAGGACCTCAGGGCAAGCCAGGCCCAAAAGGAGAA...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACCGAGCCCTGCATGCCTaGGGCACCTACTTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLLGYWQHEGLSLDFWPNRALHA*GTYFSF Trigger: AAAGGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCG...GTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | GCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGTAGGTCTTCATTTCTaGTTCCAGGTAGCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQMVTFLLGYWQHEGLSLVGLHF*FQVAQG Trigger: CCCCTGGGCTACCTGGAAGCAGAAATGAAGACCTAC...AAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGTAAGGCCTCAACCTaGTGCCTCAGAGAAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSCKAST*CLREAT Trigger: TGTTGCTTCTCTGAGGCAGCAGGTTGAGGCCTTACA...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTACACCTACTTCTCCTTTaGGCCCAGCTTCTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLHLLLL*AQLLLL Trigger: CAAAAGGAGAAGCTGGGCCCAAAGGAGAAGTAGGTG...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | GCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTCTAAGCCTTGACTTCTaGCCAAACTCCTGGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: AQMVTFLLGYWQHEGLSLLSLDF*PNSWAK Trigger: CTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAG...AAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCCCCACTTTCTCCCTTTaGTCCTTTGTCTCCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSPTFSL*SFVSRN Trigger: ATTCCTGGAGACAAAGGAGCAAAGGGAGAAAGTGGG...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | GCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTAAAGCAGCCTGGAGGTaGTGTACTTGTCCCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: AQMVTFLLGYWQHEGLSLKAAWR*CTCPCK Trigger: CTTACAGGGACAAGTACAGCACCTCCAGGCTGCTTT...AAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTATGTGCACAGCAGCTGTaGCTCCGTAAATGGTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLCAQQL*LRKWFY Trigger: GTAAAACCATTTACGGAGGCACAGCTGCTGTGCACA...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCCCCAGTGTCTCCCTTTaGTCCAGGTTCTCCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFPSVSL*SRFSNR Trigger: TCTGTTGGAGAACCTGGACCAAAGGGAGACACTGGG...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTCCCCGACACTTTaGCCATTTGGGAAGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QMVTFLLGYWQHEGLSLDFSPTL*PFGKSS Trigger: TGAGCTCTTCCCAAATGGCCAAAGTGTCGGGGAGAA...GTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR TCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCCAAAGCCTGCTGTCTTaGAAATCTTCTCCCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFQSLLS*KSSPRH Trigger: GTGTCGGGGAGAAGATTTTCAAGACAGCAGGCTTTG...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | GTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGTCTTGGAATCAGTCATaGTCAGGAAAGCAGCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VTFLLGYWQHEGLSLDFWSWNQS*SGKQPR Trigger: ACGAGGCTGCTTTCCTGAGCATGACTGATTCCAAGA...CCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | CAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACCAGAGAAGCAACATCTaGAAGCCCACTTTCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QMVTFLLGYWQHEGLSLDQRSNI*KPTFSL Trigger: AAGGGAGAAAGTGGGCTTCCAGATGTTGCTTCTCTG...GTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | TTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACACTTGCCCTCTGTCTTaGAATCAGTCATGCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FLLGYWQHEGLSLDFWPNTCPLS*NQSCSG Trigger: TCCTGAGCATGACTGATTCCAAGACAGAGGGCAAGT...GTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCGACACTTTGGCCATTTaGGAAGAGCTCAACTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFDTLAI*EELNFL Trigger: AAGAAAGTTGAGCTCTTCCCAAATGGCCAAAGTGTC...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR GCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGTTTTACAAAGCCTaGTGTCTTGAAAATCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFWFYKA*CLENLL Trigger: GAGAAGATTTTCAAGACAGCAGGCTTTGTAAAACCA...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CCA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTTTTTATTAGGATATTaGCAGCATGAGGGTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFFLLGY*QHEGLS Trigger: GCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS GCA 90 bp | AGGGACACCTCGCTCTCCCTTAGGGCCTGCGAGGCCTCTTGCCCCTaGCGAGCCCTGCATGCCTGGGGCACCTACTTCTCCTTTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RDTSLSLRACEASCP*RALHAWGTYFSFGP Trigger: GGGCCCAAAGGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAAGGGAGAGCGAGGTGTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000679234.1 |
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| CDS GCA 90 bp | CGCTCTCCCTTAGGGCCTGCGAGGCCTCTTGCCCCTGCCGAGCCCTaGATGCCTGGGGCACCTACTTCTCCTTTGGGCCCAGCTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RSPLGPARPLAPAEP*MPGAPTSPLGPASP Trigger: AGGAGAAGCTGGGCCCAAAGGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAAGGGAGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000679234.1 |
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| CDS GCA 90 bp | CTCACCAGGGACACCTCGCTCTCCCTTAGGGCCTGCGAGGCCTCTTaGCCCTGCCGAGCCCTGCATGCCTGGGGCACCTACTTCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LTRDTSLSLRACEAS*PCRALHAWGTYFSF Trigger: AAAGGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAAGGGAGAGCGAGGTGTCCCTGGTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000679234.1 |
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| CDS GCA 90 bp | ATTGTCCCCTTTGGGCCCAACTGGGCCAGCTTGTCCAGGCATCCCTaGTTGCCCTGCAGCTCCTGGCAAACCTGGGTCCCCCTTCTCGCC | + |
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Preference number: 5 (lower is better) Translates to: IVPFGPNWASLSRHP*LPCSSWQTWVPLLA Trigger: GGCGAGAAGGGGGACCCAGGTTTGCCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAAGCTGGCCCAGTTGGGCCCAAAGGGGACAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372292.8 ENST00000444384.3 |
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| CDS CCA 90 bp | TGGTCCAGGTTCTCCAACAGAGCCATTGTCCCCTTTGGGCCCAACTaGGCCAGCTTGTCCAGGCATCCCTGCTTGCCCTGCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WSRFSNRAIVPFGPN*ASLSRHPCLPCSSW Trigger: CCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAAGCTGGCCCAGTTGGGCCCAAAGGGGACAATGGCTCTGTTGGAGAACCTGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | AGCTACGACCAGCTGTTGCAAGGCGGCATTCTCAGCGGCAGAGCGTaGAGAGGCCAACTGTCCACCAGCCTGTGTGCACAGCAGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SYDQLLQGGILSGRA*RGQLSTSLCAQQLC Trigger: GCACAGCTGCTGTGCACACAGGCTGGTGGACAGTTGGCCTCTCCACGCTCTGCCGCTGAGAATGCCGCCTTGCAACAGCTGGTCGTAGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 90 bp | GCAGGGGTACAGGGGTACAGGGTGGTCCTGCCGGGACTCATGGGCTaGTGTAAGGTGTGTGATTTGTCCAAGGGAGACGAGCATCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGVQGYRVVLPGLMG*CKVCDLSKGDEHPW Trigger: CCAGGGATGCTCGTCTCCCTTGGACAAATCACACACCTTACAGCAGCCCATGAGTCCCGGCAGGACCACCCTGTACCCCTGTACCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | CACACCGGGAGGTCCTGGAGGTCCACTTGGCCCAGTGTCTCCCTTTaGTCCAGGTTCTCCAACAGAGCCATTGTCCCCTTTGGGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HTGRSWRSTWPSVSL*SRFSNRAIVPFGPN Trigger: GTTGGGCCCAAAGGGGACAATGGCTCTGTTGGAGAACCTGGACCAAAGGGAGACACTGGGCCAAGTGGACCTCCAGGACCTCCCGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372292.8 ENST00000444384.3 |
||
| CDS CCA 90 bp | AGGCTTGGAAGCCATGCTCCCGTGGCAGAGGAGGCCAGGCCTCCATaGGGGGTGAGCATGTGGTTGTGGGTAAATTTGCTGGATGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGSHAPVAEEARPP*GVSMWLWVNLLDGW Trigger: CCACCCATCCAGCAAATTTACCCACAACCACATGCTCACCCCCCATGGAGGCCTGGCCTCCTCTGCCACGGGAGCATGGCTTCCAAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | GAGCAGCAGGGGTACAGGGGTACAGGGTGGTCCTGCCGGGACTCATaGGCTGCTGTAAGGTGTGTGATTTGTCCAAGGGAGACGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EQQGYRGTGWSCRDS*AAVRCVICPRETSI Trigger: GATGCTCGTCTCCCTTGGACAAATCACACACCTTACAGCAGCCCATGAGTCCCGGCAGGACCACCCTGTACCCCTGTACCCCTGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | CCTCCTTTCCCTTCTCAGACTGGCCACAGACCAGCCACCTACCTTTaGGCCCAGCTTCTCCTTTTGGGCCTGGCTTGCCCTGAGGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PPFPSQTGHRPATYL*AQLLLLGLACPEVL Trigger: TAGGACCTCAGGGCAAGCCAGGCCCAAAAGGAGAAGCTGGGCCCAAAGGTAGGTGGCTGGTCTGTGGCCAGTCTGAGAAGGGAAAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS CCA 90 bp | GGGGATTGGGAGGGTGCATGGCAAGCCTTTGCAGCATCAAGGGTCTaGGCTCTCCCTGGCACTCTGAGCACGCCTCAGGTCATATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GDWEGAWQAFAASRV*ALPGTLSTPQVISW Trigger: CCATGATATGACCTGAGGCGTGCTCAGAGTGCCAGGGAGAGCCCAGACCCTTGATGCTGCAAAGGCTTGCCATGCACCCTCCCAATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678361.1 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGGGCCAAGCACTGCCCCACCTCTCCAGGAATGCCTTaGTCCCCCTTCAATCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGLSLDFWPNSWAKHCPTSPGMP*SPFNPG Trigger: CCCGGGATTGAAGGGGGACAAAGGCATTCCTGGAGA...GGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
||
| CDS CCA 90 bp | TATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTaGGCCAAGCACTGCCCCACCCACCCCAGTTGGCTCAGAACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: YWQHEGLSLDFWPNS*AKHCPTHPSWLRTR Trigger: GCGAGTTCTGAGCCAACTGGGGTGGGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | GGGTGCATGGCAAGCCTTTGCAGCATCAAGGGTCTGGGCTCTCCCTaGCACTCTGAGCACGCCTCAGGTCATATCATGGACCCTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCMASLCSIKGLGSP*HSEHASGHIMDPCP Trigger: AGGACAAGGGTCCATGATATGACCTGAGGCGTGCTCAGAGTGCCAGGGAGAGCCCAGACCCTTGATGCTGCAAAGGCTTGCCATGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678361.1 |
||
| CDS GCA 90 bp | GTCATGCTCAGGAAAGCAGCCTCGTTCTTAGCTACGACCAGCTGTTaGAAGGCGGCATTCTCAGCGGCAGAGCGTGGAGAGGCCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VMLRKAASFLATTSC*KAAFSAAERGEANC Trigger: ACAGTTGGCCTCTCCACGCTCTGCCGCTGAGAATGCCGCCTTGCAACAGCTGGTCGTAGCTAAGAACGAGGCTGCTTTCCTGAGCATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
||
| CDS GCA 90 bp | GAGGAAGAAGCCTTCCAGAGTTGGAGGCGGATTAAAGCCAAGACCTaGCTGACCTTCTATGCGGTGCTCCTTCCCCTACCCCAAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EEEAFQSWRRIKAKT*LTFYAVLLPLPQGH Trigger: GTGGCCTTGGGGTAGGGGAAGGAGCACCGCATAGAAGGTCAGGCAGGTCTTGGCTTTAATCCGCCTCCAACTCTGGAAGGCTTCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
||
| CDS GCA 90 bp | ATTGTCCCCTTTGGGCCCAACTGGGCCAGCTTGTCCAGGCATCCCTaGTTGCCCTGCAGCTCCTGGCAAACCTGTAGCAGCAGAAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IVPFGPNWASLSRHP*LPCSSWQTCSSRRN Trigger: ATTTCTTCTGCTGCTACAGGTTTGCCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAAGCTGGCCCAGTTGGGCCCAAAGGGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
||
| CDS CCA 90 bp | AACTGGGCCAGCTTGTCCAGGCATCCCTGCTTGCCCTGCAGCTCCTaGCAAACCTGTAGCAGCAGAAGAAATGGACAAAGACCTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NWASLSRHPCLPCSS*QTCSSRRNGQRPGP Trigger: AGGGCCAGGTCTTTGTCCATTTCTTCTGCTGCTACAGGTTTGCCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAAGCTGGCCCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
||
| CDS CCA 90 bp | GAAGTCGACACCCAGTTGCTCACCACTTGGCCCAGTGTCTCCCTTTaGTCCAGGTTCTCCAACAGAGCCATTGTCCCCTTTGGGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: EVDTQLLTTWPSVSL*SRFSNRAIVPFGPN Trigger: GTTGGGCCCAAAGGGGACAATGGCTCTGTTGGAGAACCTGGACCAAAGGGAGACACTGGGCCAAGTGGTGAGCAACTGGGTGTCGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | CCTGAAATGACCCAGTGCCACCTTCAGACAACCTTCTTCCTGGGATaGGCTCTGTGCGTGCCCACTGGCATATCCTTGCAGCTGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PEMTQCHLQTTFFLG*ALCVPTGISLQLHH Trigger: GTGGTGCAGCTGCAAGGATATGCCAGTGGGCACGCACAGAGCCCATCCCAGGAAGAAGGTTGTCTGAAGGTGGCACTGGGTCATTTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | CCTGCAGGATCAGCCCCTAGCATTCCTTTAGGATTCTGCAGAGCATaGGACTTCCACCGTCACACACCCAGGCCCAGTGGTGATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGSAPSIPLGFCRA*DFHRHTPRPSGDPG Trigger: TCCTGGATCACCACTGGGCCTGGGTGTGTGACGGTGGAAGTCTCATGCTCTGCAGAATCCTAAAGGAATGCTAGGGGCTGATCCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
||
| CDS GCA 90 bp | TTTGGGCCCAACTGGGCCAGCTTGTCCAGGCATCCCTGCTTGCCCTaGAGCTCCTGGCAAACCTGTAGCAGCAGAAGAAATGGACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGPNWASLSRHPCLP*SSWQTCSSRRNGQR Trigger: TCTTTGTCCATTTCTTCTGCTGCTACAGGTTTGCCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAAGCTGGCCCAGTTGGGCCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 90 bp | GTTGTCCTCCCAACAGCAGGTCCCATCTGTCCTGAAATGACCCAGTaGCACCTTCAGACAACCTTCTTCCTGGGATGGGCTCTGTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVLPTAGPICPEMTQ*HLQTTFFLGWALCV Trigger: CACGCACAGAGCCCATCCCAGGAAGAAGGTTGTCTGAAGGTGGCACTGGGTCATTTCAGGACAGATGGGACCTGCTGTTGGGAGGACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | CTGGGGCCCAGTTGGAATAGACCAGGGACTCTCCTGTGGGGTAGGTaGACTTGCCCTCTGTCTTGGAATCAGTCATGCTCAGGAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGPSWNRPGTLLWGR*TCPLSWNQSCSGKQ Trigger: CTGCTTTCCTGAGCATGACTGATTCCAAGACAGAGGGCAAGTTCACCTACCCCACAGGAGAGTCCCTGGTCTATTCCAACTGGGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | AGTGTTAGAGCCCACTTGTTCTTGGTACACAAACTATGGAGGCCATaGGAGCACCAGGGTGGAGGAGGGGCACCTCCCCAAATGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVRAHLFLVHKLWRP*EHQGGGGAPPQMLH Trigger: GTGCAGCATTTGGGGAGGTGCCCCTCCTCCACCCTGGTGCTCTCATGGCCTCCATAGTTTGTGTACCAAGAACAAGTGGGCTCTAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | AAGAAGCCTTCCAGAGTTGGAGGCGGATTAAAGCCAAGACCTGCCTaGCCTTCTATGCGGTGCTCCTTCCCCTACCCCAAGGCCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KKPSRVGGGLKPRPA*PSMRCSFPYPKATV Trigger: TACAGTGGCCTTGGGGTAGGGGAAGGAGCACCGCATAGAAGGTCAGGCAGGTCTTGGCTTTAATCCGCCTCCAACTCTGGAAGGCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | GCAGCATTGTTGTCCTCCCAACAGCAGGTCCCATCTGTCCTGAAATaGCCCAGTGCCACCTTCAGACAACCTTCTTCCTGGGATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AALLSSQQQVPSVLK*PSATFRQPSSWDGL Trigger: GAGCCCATCCCAGGAAGAAGGTTGTCTGAAGGTGGCACTGGGTCATTTCAGGACAGATGGGACCTGCTGTTGGGAGGACAACAATGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | AGGGTGAGAGGAAAATATTGCAGTTGTGGGGATTGGGAGGGTGCATaGCAAGCCTTTGCAGCATCAAGGGTCTGGGCTCTCCCTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RVRGKYCSCGDWEGA*QAFAASRVWALPGT Trigger: AGTGCCAGGGAGAGCCCAGACCCTTGATGCTGCAAAGGCTTGCCATGCACCCTCCCAATCCCCACAACTGCAATATTTTCCTCTCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS CCA 90 bp | GCTCCTCTGTGGAGGGTGAGAGGAAAATATTGCAGTTGTGGGGATTaGGAGGGTGCATGGCAAGCCTTTGCAGCATCAAGGGTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: APLWRVRGKYCSCGD*EGAWQAFAASRVWA Trigger: AGCCCAGACCCTTGATGCTGCAAAGGCTTGCCATGCACCCTCCCAATCCCCACAACTGCAATATTTTCCTCTCACCCTCCACAGAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS-3UTR CAA 90 bp | TTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACGGCCTGCGAGGCCTCTaGCCCCTGCCGAGCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLGYWQHEGLSLDFWPNGLRGL*PLPSPA Trigger: TGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCC...GTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS TCA 90 bp | GGTCTGTTTTTGGTAGGGTGGTCGGGGAGTGCCTCACTGAGAAGGTaGTCCGGGAGTAAAGTCCTGAAGGAGGTGAAGTATGAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLFLVGWSGSASLRR*SGSKVLKEVKYELQ Trigger: CTGCAGCTCATACTTCACCTCCTTCAGGACTTTACTCCCGGATCACCTTCTCAGTGAGGCACTCCCCGACCACCCTACCAAAAACAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | AAGGGAGACGAGCATCCCTGGTGGGACTCCCCCACGGAATATTGCTaGGCAGGAATGCTGAAGGTGCTGAGGAATAAGGAATTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KGDEHPWWDSPTEYC*AGMLKVLRNKELFP Trigger: GGGGAACAATTCCTTATTCCTCAGCACCTTCAGCATTCCTGCTCAGCAATATTCCGTGGGGGAGTCCCACCAGGGATGCTCGTCTCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679234.1 |
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| CDS CCA 90 bp | TTCTGGGGCTCCTCTGTGGAGGGTGAGAGGAAAATATTGCAGTTGTaGGGATTGGGAGGGTGCATGGCAAGCCTTTGCAGCATCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FWGSSVEGERKILQL*GLGGCMASLCSIKG Trigger: ACCCTTGATGCTGCAAAGGCTTGCCATGCACCCTCCCAATCCCCACAACTGCAATATTTTCCTCTCACCCTCCACAGAGGAGCCCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS TCA 90 bp | TATCGTAGTGTACCCAGAGACCTAGACCTGCACCCGAGTGCCACCTaGAGTGGAGCTTTATGGCCCAGCCTTTTGCCTGTTTTGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YRSVPRDLDLHPSAT*SGALWPSLLPVLTP Trigger: AGGAGTCAAAACAGGCAAAAGGCTGGGCCATAAAGCTCCACTTCAGGTGGCACTCGGGTGCAGGTCTAGGTCTCTGGGTACACTACGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 90 bp | GATTTTAAGAGCAAGGAGAATCGAGGGAGATTTGCAGAGAGGAGGTaGCATTTCAGGCTTGGAAGCCATGCTCCCGTGGCAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DFKSKENRGRFAERR*HFRLGSHAPVAEEA Trigger: GGCCTCCTCTGCCACGGGAGCATGGCTTCCAAGCCTGAAATGTCACCTCCTCTCTGCAAATCTCCCTCGATTCTCCTTGCTCTTAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 90 bp | AAAGCAGCCTGGAGGTGCTGTACTTGTCCCTGTAAGGCCTCAACCTaGTGCCTCAGAGAAGCAACATCTGGAAGCCCACTTTCTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KAAWRCCTCPCKAST*CLREATSGSPLSPF Trigger: AAAGGGAGAAAGTGGGCTTCCAGATGTTGCTTCTCTGAGGCAGCAGGTTGAGGCCTTACAGGGACAAGTACAGCACCTCCAGGCTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | AGCCTCACATTTCACTCTGTGGTGTCCTGCAGCAGCTGTAACTTTTaGCCACATTCTGGAGAGAAGTCCTTCCCGGCACAGATGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLTFHSVVSCSSCNF*PHSGEKSFPAQMVT Trigger: GGTGACCATCTGTGCCGGGAAGGACTTCTCTCCAGAATGTGGCCAAAAGTTACAGCTGCTGCAGGACACCACAGAGTGAAATGTGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS-3UTR CAA 90 bp | TTCCCGGCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAGAGCCATTGTCCCCTTaGGGCCCAACTGGGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPAQMVTFLLGYWQHEGLEPLSP*GPTGPA Trigger: AGCTGGCCCAGTTGGGCCCAAAGGGGACAATGGCTC...TAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGCCGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CAA 90 bp | GCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTCCCCACCCACCCCAGTaGGCTCAGAACTCGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: AQMVTFLLGYWQHEGLSLPHPPQ*AQNSQT Trigger: GGTCTGCGAGTTCTGAGCCAACTGGGGTGGGTGGGG...AAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS TCA 90 bp | GACCTTCTATGCGGTGCTCCTTCCCCTACCCCAAGGCCACTGTATTaGTGGCAGGCAATTTGTCAGCTCTTACCTGTGATCATGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLLCGAPSPTPRPLY*WQAICQLLPVIMDF Trigger: GAAGTCCATGATCACAGGTAAGAGCTGACAAATTGCCTGCCATCAATACAGTGGCCTTGGGGTAGGGGAAGGAGCACCGCATAGAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 90 bp | GCGTGGAGAGGCCAACTGTCCACCAGCCTGTGTGCACAGCAGCTGTaGCTCCGTAAATGGTTTTACAAAGCCTGCTGTCTTGAAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: AWRGQLSTSLCAQQL*LRKWFYKACCLENL Trigger: AAGATTTTCAAGACAGCAGGCTTTGTAAAACCATTTACGGAGGCACAGCTGCTGTGCACACAGGCTGGTGGACAGTTGGCCTCTCCACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS-3UTR CAA 90 bp | GTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCCAACTGGGCCAGCTaGTCCAGGCATCCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTFLLGYWQHEGLSLDFWPNWAS*SRHPCL Trigger: CAAGCAGGGATGCCTGGACAAGCTGGCCCAGTTGGG...CCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
||
| CDS-3UTR CAA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCGTCCTGGAGGTCCACTaGGCCCAGTGTCTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSVLEVH*AQCLPL Trigger: CAAAGGGAGACACTGGGCCAAGTGGACCTCCAGGAC...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372292.8 |
||
| CDS CCA 90 bp | AACTTTAGGGTCAGAGAGAGAAGTGGGGAGACTCTCCTTGCTTTCTaGGGCTCCTCTGTGGAGGGTGAGAGGAAAATATTGCAGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NFRVRERSGETLLAF*GSSVEGERKILQLW Trigger: CCACAACTGCAATATTTTCCTCTCACCCTCCACAGAGGAGCCCCAGAAAGCAAGGAGAGTCTCCCCACTTCTCTCTCTGACCCTAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678361.1 |
||
| CDS TCA 90 bp | TGGGTCATATTTACCCTCCATGATACGTCGGGGATGTCACCAGAGTaGCTCAAGCTTCACCCTCCACCCCTGCTCAAAGATCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WVIFTLHDTSGMSPE*LKLHPPPLLKDLFF Trigger: AAAGAAGAGATCTTTGAGCAGGGGTGGAGGGTGAAGCTTGAGTCACTCTGGTGACATCCCCGACGTATCATGGAGGGTAAATATGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679234.1 |
||
| CDS CCA 90 bp | CACCTGGAAACATCTGAATTCCATGCCCAGTGGAATTCCGTGCCCTaGGTCCAGCCACTGGTTACAGTCCTTATTAGGGATGAAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLETSEFHAQWNSVP*VQPLVTVLIRDEME Trigger: TTCCATTTCATCCCTAATAAGGACTGTAACCAGTGGCTGGACCCAGGGCACGGAATTCCACTGGGCATGGAATTCAGATGTTTCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
||
| CDS-3UTR CAA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCATGGCAGGTTTCTTTTaGTTAGGCCCCAGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSMAGFF*LGPRSS Trigger: GGAGCTCCTGGGGCCTAACAAAAAGAAACCTGCCAT...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372292.8 |
||
| CDS-3UTR CAA 90 bp | TTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTGCAAGCACTGGGCATaGTTCTGTGGGAGTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGYWQHEGLSLDFWPNSCKHWA*FCGSRS Trigger: AGACCTACTCCCACAGAACAATGCCCAGTGCTTGCA...GGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CAA 90 bp | GTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTGGCTTCTCCCCGACACTTaGGCCATTTGGGAAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTFLLGYWQHEGLSLDFWLLPDT*AIWEEL Trigger: GAGCTCTTCCCAAATGGCCAAAGTGTCGGGGAGAAG...CCAGAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCAGCTACGACCAGCTGTaGCAAGGCGGCATTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFSYDQL*QGGILS Trigger: GCTGAGAATGCCGCCTTGCAACAGCTGGTCGTAGCT...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS CCA 90 bp | CCTGAAAGGAGTTTTAGTGTGAAGGAAGCCTCACATTTCACTCTGTaGTGTCCTGCAGCAGCTGTAACTTTTGGCCACATTCTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PERSFSVKEASHFTL*CPAAAVTFGHILER Trigger: TCTCTCCAGAATGTGGCCAAAAGTTACAGCTGCTGCAGGACACCACAGAGTGAAATGTGAGGCTTCCTTCACACTAAAACTCCTTTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS-3UTR CAA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCGCACCTACTTCTCCTTaGGGCCCAGCTTCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFAPTSP*GPASPF Trigger: AAAAGGAGAAGCTGGGCCCAAAGGAGAAGTAGGTGC...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CAA 90 bp | GCACAGATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTAACTTGCCCTCTGTCTaGGAATCAGTCATGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQMVTFLLGYWQHEGLSLNLPSV*ESVMLR Trigger: CCTGAGCATGACTGATTCCAAGACAGAGGGCAAGTT...AAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCATCTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCTCTCCCTTTGCTCCTTaGTCTCCAGGAATGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFSPFAP*SPGMPL Trigger: CAAAGGCATTCCTGGAGACAAAGGAGCAAAGGGAGA...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS-3UTR CAA 90 bp | ATGGTCACCTTTTTATTAGGATATTGGCAGCATGAGGGTCTAAGCCTTGACTTCCGACACTTTGGCCATTaGGGAAGAGCTCAACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MVTFLLGYWQHEGLSLDFRHFGH*GRAQLS Trigger: AGAAAGTTGAGCTCTTCCCAAATGGCCAAAGTGTCG...GAAGTCAAGGCTTAGACCCTCATGCTGCCAATATCCTAATAAAAAGGTGACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372292.8 |
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| CDS TCA 90 bp | CAAGGCCACTGTATTGATGGCAGGCAATTTGTCAGCTCTTACCTGTaGTCATGGACTTCTTGCATTCCATATATATATATTAGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGHCIDGRQFVSSYL*SWTSCIPYIYIREA Trigger: GGCTTCCCTAATATATATATATGGAATGCAAGAAGTCCATGATCACAGGTAAGAGCTGACAAATTGCCTGCCATCAATACAGTGGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 90 bp | ACTTCTTGCATTCCATATATATATATTAGGGAAGCCAACCAGAAATaGCACCAGACAGGTGGTGCTAACTTGTTCATTCAGTTATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCIPYIYIREANQK*HQTGGANLFIQLLV Trigger: GACCAATAACTGAATGAACAAGTTAGCACCACCTGTCTGGTGCCATTTCTGGTTGGCTTCCCTAATATATATATATGGAATGCAAGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 90 bp | TTATTGGTCGATTTGCTCATTTATTTGTTCACTAAGAGCCATCTATaGAGCATCTACTTTATACCTAGCACTAGGCAAGATGCAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVDLLIYLFTKSHL*SIYFIPSTRQDANL Trigger: CAGATTTGCATCTTGCCTAGTGCTAGGTATAAAGTAGATGCTGCATAGATGGCTCTTAGTGAACAAATAAATGAGCAAATCGACCAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | GACACCTCGCTCTCCCTTAGGGCCTGCGAGGCCTCTTaGCCCTGCCGAGCCCTGCATGCCTGGGGCACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: DTSLSLRACEAS*PCRALHAWGTY Trigger: GTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAAGGGAGAGCGAGGTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | TCGCTCTCCCTTAGGGCCTGCGAGGCCTCTTGCCCCTaGCGAGCCCTGCATGCCTGGGGCACCTACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLRACEASCP*RALHAWGTYFS Trigger: GGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAAGGGAGAGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | TTAGGGCCTGCGAGGCCTCTTGCCCCTGCCGAGCCCTaGATGCCTGGGGCACCTACTTCTCCTTTGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGPARPLAPAEP*MPGAPTSPLGP Trigger: TGGGCCCAAAGGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000444384.3 ENST00000679234.1 |
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| CDS GCA 72 bp | TTAGGGCCTGCGAGGCCTCTTGCCCCTGCCGAGCCCTaGATGCCTGGGGCACCTACTTCTCCTGAAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGPARPLAPAEP*MPGAPTSPEEG Trigger: TCCTTCTTCAGGAGAAGTAGGTGCCCCAGGCATGCAGGGCTCGGCAGGGGCAAGAGGCCTCGCAGGCCCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS CCA 72 bp | CAGCTGTTGCAAGGCGGCATTCTCAGCGGCAGAGCGTaGAGAGGCCAACTGTCCACCAGCCTGTGTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QLLQGGILSGRA*RGQLSTSLCAQ Trigger: CTGTGCACACAGGCTGGTGGACAGTTGGCCTCTCCACGCTCTGCCGCTGAGAATGCCGCCTTGCAACAGCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | GAGGGTGCATGGCAAGCCTTTGCAGCATCAAGGGTCTaGGCTCTCCCTGGCACTCTGAGCACGCCTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EGAWQAFAASRV*ALPGTLSTPQV Trigger: GACCTGAGGCGTGCTCAGAGTGCCAGGGAGAGCCCAGACCCTTGATGCTGCAAAGGCTTGCCATGCACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS CAA 90 bp | AGGGTGGTCCTGCCGGGACTCATGGGCTGCTGTAAGGTGTGTGATTaGTCCAAGGGAGACGAGCATCCCTGGTGGGACTCCCCCACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVVLPGLMGCCKVCD*SKGDEHPWWDSPTE Trigger: TTCCGTGGGGGAGTCCCACCAGGGATGCTCGTCTCCCTTGGACAAATCACACACCTTACAGCAGCCCATGAGTCCCGGCAGGACCACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | GAGGAGCAGCAGGGGTACAGGGGTACAGGGTGGTCCTaGCGGGACTCATGGGCTGCTGTAAGGTGTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: EEQQGYRGTGWS*RDSWAAVRCVI Trigger: AATCACACACCTTACAGCAGCCCATGAGTCCCGGCAGGACCACCCTGTACCCCTGTACCCCTGCTGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | AGATCTCCACACAGTCCTCTGACCCGCCATCATCGTTaGGCTCCCCTGGGGCCCAGTTGGAATAGACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPHSPLTRHHR*APLGPSWNRPG Trigger: CCCTGGTCTATTCCAACTGGGCCCCAGGGGAGCCCAACGATGATGGCGGGTCAGAGGACTGTGTGGAGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | CATGAGGGTCTAAGCCTTGACTTCTGGCCAAACTCCTaGGCCAAGCACTGCCCCACCCACCCCAGTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HEGLSLDFWPNS*AKHCPTHPSWL Trigger: GAGCCAACTGGGGTGGGTGGGGCAGTGCTTGGCCCAGGAGTTTGGCCAGAAGTCAAGGCTTAGACCCTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | CAGGGGTACAGGGTGGTCCTGCCGGGACTCATGGGCTaGTGTAAGGTGTGTGATTTGTCCAAGGGAGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: QGYRVVLPGLMG*CKVCDLSKGDE Trigger: CTCGTCTCCCTTGGACAAATCACACACCTTACAGCAGCCCATGAGTCCCGGCAGGACCACCCTGTACCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | GGGTACAGGGGTACAGGGTGGTCCTGCCGGGACTCATaGGCTGCTGTAAGGTGTGTGATTTGTCCAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GYRGTGWSCRDS*AAVRCVICPRE Trigger: CTCCCTTGGACAAATCACACACCTTACAGCAGCCCATGAGTCCCGGCAGGACCACCCTGTACCCCTGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | CTGCCGGGACTCATGGGCTGCTGTAAGGTGTGTGATTaGTCCAAGGGAGACGAGCATCCCTGGTGGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPGLMGCCKVCD*SKGDEHPWWDS Trigger: GGAGTCCCACCAGGGATGCTCGTCTCCCTTGGACAAATCACACACCTTACAGCAGCCCATGAGTCCCGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 90 bp | AGTCATGCTCAGGAAAGCAGCCTCGTTCTTAGCTACGACCAGCTGTaGCAAGGCGGCATTCTCAGCGGCAGAGCGTGGAGAGGCCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: SHAQESSLVLSYDQL*QGGILSGRAWRGQL Trigger: CAGTTGGCCTCTCCACGCTCTGCCGCTGAGAATGCCGCCTTGCAACAGCTGGTCGTAGCTAAGAACGAGGCTGCTTTCCTGAGCATGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 90 bp | AGCACATTTTCCTCAAGGCAGGATGCCCTGACCCCATGTGGAGCCTaGCTTGGGCTTCACCCAGGCCAAGTCAGCAGCAGGAAGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: STFSSRQDALTPCGA*LGLHPGQVSSRKMD Trigger: GTCCATCTTCCTGCTGCTGACTTGGCCTGGGTGAAGCCCAAGCAAGGCTCCACATGGGGTCAGGGCATCCTGCCTTGAGGAAAATGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | TTGCAGCATCAAGGGTCTGGGCTCTCCCTGGCACTCTaGGCACGCCTCAGGTCATATCATGGACCCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQHQGSGLSLAL*ARLRSYHGPLS Trigger: GGACAAGGGTCCATGATATGACCTGAGGCGTGCTCAGAGTGCCAGGGAGAGCCCAGACCCTTGATGCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS GCA 72 bp | AGGAAAGCAGCCTCGTTCTTAGCTACGACCAGCTGTTaGAAGGCGGCATTCTCAGCGGCAGAGCGTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKAASFLATTSC*KAAFSAAERGE Trigger: CTCTCCACGCTCTGCCGCTGAGAATGCCGCCTTGCAACAGCTGGTCGTAGCTAAGAACGAGGCTGCTTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | GCCTTCCAGAGTTGGAGGCGGATTAAAGCCAAGACCTaGCTGACCTTCTATGCGGTGCTCCTTCCCCTACCC | + |
|
Preference number: 6 (lower is better) Translates to: AFQSWRRIKAKT*LTFYAVLLPLP Trigger: GGGTAGGGGAAGGAGCACCGCATAGAAGGTCAGGCAGGTCTTGGCTTTAATCCGCCTCCAACTCTGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | TTCAGACAACCTTCTTCCTGGGATGGGCTCTGTGCGTaGCCACTGGCATATCCTTGCAGCTGCACCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: FRQPSSWDGLCA*PLAYPCSCTTT Trigger: GGTGGTGGTGCAGCTGCAAGGATATGCCAGTGGGCACGCACAGAGCCCATCCCAGGAAGAAGGTTGTCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | CACCTTCAGACAACCTTCTTCCTGGGATGGGCTCTGTaGGTGCCCACTGGCATATCCTTGCAGCTGCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: HLQTTFFLGWAL*VPTGISLQLHH Trigger: GTGGTGCAGCTGCAAGGATATGCCAGTGGGCACGCACAGAGCCCATCCCAGGAAGAAGGTTGTCTGAAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | AGGCTGAGCGTGACCGGGGGCCAGAAAGAAGCTATGTaGTTGGAGCTGAGTAGGGGTGGCAGCACCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: RLSVTGGQKEAM*LELSRGGSTKF Trigger: GAATTTGGTGCTGCCACCCCTACTCAGCTCCAACCACATAGCTTCTTTCTGGCCCCCGGTCACGCTCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | CAGGAAAGCAGCCTCGTTCTTAGCTACGACCAGCTGTaGCAAGGCGGCATTCTCAGCGGCAGAGCGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QESSLVLSYDQL*QGGILSGRAWR Trigger: TCTCCACGCTCTGCCGCTGAGAATGCCGCCTTGCAACAGCTGGTCGTAGCTAAGAACGAGGCTGCTTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | GTACCCAGAGACCTAGACCTGCACCCGAGTGCCACCTaGAGTGGAGCTTTATGGCCCAGCCTTTTGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VPRDLDLHPSAT*SGALWPSLLPV Trigger: AACAGGCAAAAGGCTGGGCCATAAAGCTCCACTTCAGGTGGCACTCGGGTGCAGGTCTAGGTCTCTGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | TCCAGAGTTGGAGGCGGATTAAAGCCAAGACCTGCCTaGCCTTCTATGCGGTGCTCCTTCCCCTACCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRVGGGLKPRPA*PSMRCSFPYPK Trigger: CTTGGGGTAGGGGAAGGAGCACCGCATAGAAGGTCAGGCAGGTCTTGGCTTTAATCCGCCTCCAACTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | CTGAGCGTGACCGGGGGCCAGAAAGAAGCTATGTGGTaGGAGCTGAGTAGGGGTGGCAGCACCAAATTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSVTGGQKEAMW*ELSRGGSTKFR Trigger: TCTGAATTTGGTGCTGCCACCCCTACTCAGCTCCAACCACATAGCTTCTTTCTGGCCCCCGGTCACGCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 90 bp | CTCAGAGAAGCAACATCTGGAAGCCCACTTTCTCCCTTTGCTCCTTaGTCTCCAGGAATGCCTTTGTCCCCCTTCAATCCCGGGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LREATSGSPLSPFAP*SPGMPLSPFNPGGP Trigger: GGGACCCCCGGGATTGAAGGGGGACAAAGGCATTCCTGGAGACAAAGGAGCAAAGGGAGAAAGTGGGCTTCCAGATGTTGCTTCTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | TCTGACACCCAACAGCACATTTTCCTCAAGGCAGGATaGCCTGACCCCATGTGGAGCCTTGCTTGGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SDTQQHIFLKAG*PDPMWSLAWAS Trigger: TGAAGCCCAAGCAAGGCTCCACATGGGGTCAGGGCATCCTGCCTTGAGGAAAATGTGCTGTTGGGTGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | CCAACAGCAGGTCCCATCTGTCCTGAAATGACCCAGTaGCACCTTCAGACAACCTTCTTCCTGGGATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PTAGPICPEMTQ*HLQTTFFLGWA Trigger: AGCCCATCCCAGGAAGAAGGTTGTCTGAAGGTGGCACTGGGTCATTTCAGGACAGATGGGACCTGCTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | CAGAGACCTAGACCTGCACCCGAGTGCCACCTGAAGTaGAGCTTTATGGCCCAGCCTTTTGCCTGTTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QRPRPAPECHLK*SFMAQPFACFD Trigger: GTCAAAACAGGCAAAAGGCTGGGCCATAAAGCTCCACTTCAGGTGGCACTCGGGTGCAGGTCTAGGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | GGGGGTGAGCATGTGGTTGTGGGTAAATTTGCTGGATaGGTGGAAGAATCTGTGCTGGCGTATCCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGEHVVVGKFAG*VEESVLAYPSS Trigger: GCTGCTGGGATACGCCAGCACAGATTCTTCCACCCATCCAGCAAATTTACCCACAACCACATGCTCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | GAAACACCTGAAGTCGACACCCAGTTGCTCACCACTTaGCCCAGTGTCTCCCTTTGGTCCAGGTTCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ETPEVDTQLLTT*PSVSLWSRFSN Trigger: GTTGGAGAACCTGGACCAAAGGGAGACACTGGGCCAAGTGGTGAGCAACTGGGTGTCGACTTCAGGTGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | TTGGTAGGGTGGTCGGGGAGTGCCTCACTGAGAAGGTaGTCCGGGAGTAAAGTCCTGAAGGAGGTGAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LVGWSGSASLRR*SGSKVLKEVKY Trigger: ATACTTCACCTCCTTCAGGACTTTACTCCCGGATCACCTTCTCAGTGAGGCACTCCCCGACCACCCTACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | TTGTCCTCCCAACAGCAGGTCCCATCTGTCCTGAAATaGCCCAGTGCCACCTTCAGACAACCTTCTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSQQQVPSVLK*PSATFRQPSSW Trigger: CCAGGAAGAAGGTTGTCTGAAGGTGGCACTGGGTCATTTCAGGACAGATGGGACCTGCTGTTGGGAGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | GAGCATCCCTGGTGGGACTCCCCCACGGAATATTGCTaGGCAGGAATGCTGAAGGTGCTGAGGAATAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EHPWWDSPTEYC*AGMLKVLRNKE Trigger: TTCCTTATTCCTCAGCACCTTCAGCATTCCTGCTCAGCAATATTCCGTGGGGGAGTCCCACCAGGGATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679234.1 |
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| CDS GCA 72 bp | TGGAGGTGCTGTACTTGTCCCTGTAAGGCCTCAACCTaGTGCCTCAGAGAAGCAACATCTGGAAGCCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: WRCCTCPCKAST*CLREATSGSPL Trigger: AAGTGGGCTTCCAGATGTTGCTTCTCTGAGGCAGCAGGTTGAGGCCTTACAGGGACAAGTACAGCACCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | AGCTTGTCCAGGCATCCCTGCTTGCCCTGCAGCTCCTaGCAAACCTGTAGCAGCAGAAGAAATGGACAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLSRHPCLPCSS*QTCSSRRNGQR Trigger: TCTTTGTCCATTTCTTCTGCTGCTACAGGTTTGCCAGGAGCTGCAGGGCAAGCAGGGATGCCTGGACAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | TTTACCCTCCATGATACGTCGGGGATGTCACCAGAGTaGCTCAAGCTTCACCCTCCACCCCTGCTCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FTLHDTSGMSPE*LKLHPPPLLKD Trigger: ATCTTTGAGCAGGGGTGGAGGGTGAAGCTTGAGTCACTCTGGTGACATCCCCGACGTATCATGGAGGGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679234.1 |
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| CDS CCA 72 bp | ATGCCCAGTGGAATTCCGTGCCCTGGGTCCAGCCACTaGTTACAGTCCTTATTAGGGATGAAATGGAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MPSGIPCPGSSH*LQSLLGMKWKH Trigger: GTGCTTCCATTTCATCCCTAATAAGGACTGTAACCAGTGGCTGGACCCAGGGCACGGAATTCCACTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | GTGAGCATGTGGTTGTGGGTAAATTTGCTGGATGGGTaGAAGAATCTGTGCTGGCGTATCCCAGCAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VSMWLWVNLLDG*KNLCWRIPAAP Trigger: TGGTGCTGCTGGGATACGCCAGCACAGATTCTTCCACCCATCCAGCAAATTTACCCACAACCACATGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | AAGGTGAGGGTAATAACAGAGGTAAGGGAGGCAGCATaGTTGTCCTCCCAACAGCAGGTCCCATCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: KVRVITEVREAA*LSSQQQVPSVL Trigger: CAGGACAGATGGGACCTGCTGTTGGGAGGACAACAATGCTGCCTCCCTTACCTCTGTTATTACCCTCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | AGTTGGAATAGACCAGGGACTCTCCTGTGGGGTAGGTaGACTTGCCCTCTGTCTTGGAATCAGTCATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SWNRPGTLLWGR*TCPLSWNQSCS Trigger: TGAGCATGACTGATTCCAAGACAGAGGGCAAGTTCACCTACCCCACAGGAGAGTCCCTGGTCTATTCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS TCA 72 bp | CCACAAAGGCAGGATCTGGGTCATATTTACCCTCCATaGTACGTCGGGGATGTCACCAGAGTGACTCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: PQRQDLGHIYPP*YVGDVTRVTQA Trigger: AGCTTGAGTCACTCTGGTGACATCCCCGACGTATCATGGAGGGTAAATATGACCCAGATCCTGCCTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679234.1 |
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| CDS CCA 72 bp | ACATCTGAATTCCATGCCCAGTGGAATTCCGTGCCCTaGGTCCAGCCACTGGTTACAGTCCTTATTAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: TSEFHAQWNSVP*VQPLVTVLIRD Trigger: ATCCCTAATAAGGACTGTAACCAGTGGCTGGACCCAGGGCACGGAATTCCACTGGGCATGGAATTCAGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | GTGAGGGTAATAACAGAGGTAAGGGAGGCAGCATTGTaGTCCTCCCAACAGCAGGTCCCATCTGTCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VRVITEVREAAL*SSQQQVPSVLK Trigger: TTTCAGGACAGATGGGACCTGCTGTTGGGAGGACAACAATGCTGCCTCCCTTACCTCTGTTATTACCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | TGGAAACATCTGAATTCCATGCCCAGTGGAATTCCGTaGCCTGGGTCCAGCCACTGGTTACAGTCCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: WKHLNSMPSGIP*PGSSHWLQSLL Trigger: TAATAAGGACTGTAACCAGTGGCTGGACCCAGGGCACGGAATTCCACTGGGCATGGAATTCAGATGTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | CCCCATTTTATAGATGAGGAAGAAGCCTTCCAGAGTTaGAGGCGGATTAAAGCCAAGACCTGCCTGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: PHFIDEEEAFQS*RRIKAKTCLTF Trigger: GAAGGTCAGGCAGGTCTTGGCTTTAATCCGCCTCCAACTCTGGAAGGCTTCTTCCTCATCTATAAAATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 90 bp | CAAAGAGAAAGTGGGATTTTAAGAGCAAGGAGAATCGAGGGAGATTaGCAGAGAGGAGGTGACATTTCAGGCTTGGAAGCCATGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: QRESGILRARRIEGD*QRGGDISGLEAMLP Trigger: CGGGAGCATGGCTTCCAAGCCTGAAATGTCACCTCCTCTCTGCAAATCTCCCTCGATTCTCCTTGCTCTTAAAATCCCACTTTCTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 90 bp | ACACAGGAACAAACACAGCTAAGAGCGCGTTCAGCAGGTGTGGTTTaGTTAGCAATGGAGCTTTTTGCCCGCAACTTTAGGGTCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: TQEQTQLRARSAGVV*LAMELFARNFRVRE Trigger: CTCTCTGACCCTAAAGTTGCGGGCAAAAAGCTCCATTGCTAACAAAACCACACCTGCTGAACGCGCTCTTAGCTGTGTTTGTTCCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS CAA 72 bp | CAAACACAGCTAAGAGCGCGTTCAGCAGGTGTGGTTTaGTTAGCAATGGAGCTTTTTGCCCGCAACTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: QTQLRARSAGVV*LAMELFARNFR Trigger: CCTAAAGTTGCGGGCAAAAAGCTCCATTGCTAACAAAACCACACCTGCTGAACGCGCTCTTAGCTGTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678361.1 |
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| CDS CAA 90 bp | TGCTCCTTCCCCTACCCCAAGGCCACTGTATTGATGGCAGGCAATTaGTCAGCTCTTACCTGTGATCATGGACTTCTTGCATTCCATATA | + |
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Preference number: 6 (lower is better) Translates to: CSFPYPKATVLMAGN*SALTCDHGLLAFHI Trigger: TATATGGAATGCAAGAAGTCCATGATCACAGGTAAGAGCTGACAAATTGCCTGCCATCAATACAGTGGCCTTGGGGTAGGGGAAGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | AGGGAGAGATCTGCAGGGTCAAATGCAGCTGATGGTTaGAGAAAAGGGCCTGAAAAGGAGTCTTTGGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: RERSAGSNAADG*RKGPEKESLGL Trigger: TAAACCCAAAGACTCCTTTTCAGGCCCTTTTCTCAAACCATCAGCTGCATTTGACCCTGCAGATCTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | AAAGCCTGCTGTCTTGAAAATCTTCTCCCCGACACTTaGGCCATTTGGGAAGAGCTCAACTTTCTTATACTG | + |
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Preference number: 6 (lower is better) Translates to: KACCLENLLPDT*AIWEELNFLIL Trigger: CAGTATAAGAAAGTTGAGCTCTTCCCAAATGGCCAAAGTGTCGGGGAGAAGATTTTCAAGACAGCAGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372292.8 ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 72 bp | GCCAACCAGAAATGGCACCAGACAGGTGGTGCTAACTaGTTCATTCAGTTATTGGTCGATTTGCTCATTTAT | + |
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Preference number: 6 (lower is better) Translates to: ANQKWHQTGGAN*FIQLLVDLLIY Trigger: ATAAATGAGCAAATCGACCAATAACTGAATGAACAAGTTAGCACCACCTGTCTGGTGCCATTTCTGGTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CCA 72 bp | ATTCCATATATATATATTAGGGAAGCCAACCAGAAATaGCACCAGACAGGTGGTGCTAACTTGTTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: IPYIYIREANQK*HQTGGANLFIQ Trigger: CTGAATGAACAAGTTAGCACCACCTGTCTGGTGCCATTTCTGGTTGGCTTCCCTAATATATATATATGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS CAA 90 bp | GGTGCTAACTTGTTCATTCAGTTATTGGTCGATTTGCTCATTTATTaGTTCACTAAGAGCCATCTATGCAGCATCTACTTTATACCTAGC | + |
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Preference number: 6 (lower is better) Translates to: GANLFIQLLVDLLIY*FTKSHLCSIYFIPS Trigger: GCTAGGTATAAAGTAGATGCTGCATAGATGGCTCTTAGTGAACAAATAAATGAGCAAATCGACCAATAACTGAATGAACAAGTTAGCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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| CDS GCA 72 bp | GATTTGCTCATTTATTTGTTCACTAAGAGCCATCTATaGAGCATCTACTTTATACCTAGCACTAGGCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: DLLIYLFTKSHL*SIYFIPSTRQD Trigger: ATCTTGCCTAGTGCTAGGTATAAAGTAGATGCTGCATAGATGGCTCTTAGTGAACAAATAAATGAGCAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678361.1 ENST00000679234.1 |
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