RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFTPB (Homo sapiens)

Ensembl gene IDs: ENSG00000168878

Ensembl transcript IDs: ENST00000393822.7, ENST00000409383.6, ENST00000428225.5, ENST00000473692.1, ENST00000491167.1, ENST00000494165.1, ENST00000519937.7

Found 565 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGAGAGGATGGAAGTGGGCTCTGGTGTCAGACTGTGGTTGAGCTaGGACAGACAAGGCCGACACAGGGCTGGGGGCCCGTGGTCCACC +
Preference number: 1 (lower is better)
Translates to: PERMEVGSGVRLWLS*DRQGRHRAGGPWST
Trigger: GGTGGACCACGGGCCCCCAGCCCTGTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 90 bp TTTTTCCTGAGCCCAGCCCTGGGAGGTCGTGGTAGGTGTGGAGGCTaGAGAGCTCCTCCAGATGCTGCCCTCGCTGTGCCTCACACCAGA +
Preference number: 1 (lower is better)
Translates to: FFLSPALGGRGRCGG*RAPPDAALAVPHTR
Trigger: TCTGGTGTGAGGCACAGCGAGGGCAGCATCTGGAGGAGCTCTGCAGCCTCCACACCTACCACGACCTCCCAGGGCTGGGCTCAGGAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR TCA 90 bp TCACACCAGAGAGGATGGAAGTGGGCTCTGGTGTCAGACTGTGGTTaGGCTGAGACAGACAAGGCCGACACAGGGCTGGGGGCCCGTGGT +
Preference number: 1 (lower is better)
Translates to: SHQRGWKWALVSDCG*AETDKADTGLGARG
Trigger: ACCACGGGCCCCCAGCCCTGTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CCA 90 bp GCTGCCCTCGCTGTGCCTCACACCAGAGAGGATGGAAGTGGGCTCTaGTGTCAGACTGTGGTTGAGCTGAGACAGACAAGGCCGACACAG +
Preference number: 1 (lower is better)
Translates to: AALAVPHTREDGSGL*CQTVVELRQTRPTQ
Trigger: CTGTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTGGTGTGAGGCACAGCGAGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 90 bp CAGAGCATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATaGCAGAGCGTGCAGTGTCCACCCTTGACTACGCTGGGGAATTGC +
Preference number: 1 (lower is better)
Translates to: QSISRKKACPVAIPS*QSVQCPPLTTLGNC
Trigger: GCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGATGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CCA 90 bp CCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTaGAGGTGTGGAGCCAGAGGCTGTGGGGAGAAGATGGAAAAAGCC +
Preference number: 1 (lower is better)
Translates to: PKSRLHRQLFLALER*RCGARGCGEKMEKA
Trigger: GGCTTTTTCCATCTTCTCCCCACAGCCTCTGGCTCCACACCTCCACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 90 bp AAAGCAATAGCTCTCAAGCAGCAGAGCATCTCGAGGAAGAAAGCTTaGCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGTGTCCACCC +
Preference number: 1 (lower is better)
Translates to: KAIALKQQSISRKKA*PVAIPSCQSVQCPP
Trigger: GGGTGGACACTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGATGCTCTGCTGCTTGAGAGCTATTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CCA 90 bp CCCCAAGCTCAGTGTCAAAACACACACCCTGCCGTAGCTCTCTCCTaGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAG +
Preference number: 1 (lower is better)
Translates to: PQAQCQNTHPAVALS*ARWDCGCHMLPCEE
Trigger: CTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCCAGGAGAGAGCTACGGCAGGGTGTGTGTTTTGACACTGAGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 90 bp AGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCCCTAGCTTaGACAACCCCAGCTGAGCTTTCAGCAGATAAATCACAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: SIGADIVLHRNGSLA*TTPAELSADKSQQK
Trigger: TTTCTGCTGTGATTTATCTGCTGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAATGTCTGCACCAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCGGGCCTCCCATGCCCTaGTGGTCAGGACCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPGPPMP*WSGPAP
Trigger: GGGGGCAGGTCCTGACCATCAGGGCATGGGAGGCCC...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR-3UTR GCA 90 bp TCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCGTGGCCGCCTCTTCCTaGTTGGGGAGCAGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: SGSGKGVFLMASQKPSGAVAASS*LGSRRA
Trigger: GGCCCTTCTGCTCCCCAAGCAGGAAGAGGCGGCCAC...GGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR-3UTR CCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAAGCAGCCGGCAGGAGTaGCCGCCTCTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGSSRQE*PPLPAW
Trigger: CCAAGCAGGAAGAGGCGGCCACTCCTGCCGGCTGCT...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR-3UTR GCA 90 bp TCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCCTGATGGTCAGGACCTaGCCCCTTACCTCCCCGCAA +
Preference number: 2 (lower is better)
Translates to: SGSGKGVFLMASQKPSGALMVRT*PLTSPQ
Trigger: TTGCGGGGAGGTAAGGGGGCAGGTCCTGACCATCAG...GGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR-3UTR CCA 90 bp CAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCATTACCTCCCCGCAACTaGGGGCCTGGACTCACCTGG +
Preference number: 2 (lower is better)
Translates to: QCSGSGKGVFLMASQKPSLPPRN*GPGLTW
Trigger: CCAGGTGAGTCCAGGCCCCCAGTTGCGGGGAGGTAA...TGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGGCGGTGTGGGAGCTaGGGCTTCTTTTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGRCGS*GFFSAW
Trigger: CCAGGCTGAAAAGAAGCCTCAGCTCCCACACCGCCC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGTCCACCAGTGGAAGTaGCTGCCGAGGAAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQVHQWK*LPRKGG
Trigger: ACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGAC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGTGGCTGGTTTTTCCTaGGCCCAGCCCTGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQVAGFS*AQPWEV
Trigger: GACCTCCCAGGGCTGGGCTCAGGAAAAACCAGCCAC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACCGCTGACTTCAGGGTaGGGCCACAGCTACTGCAGC +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQPLTSG*GHSYCS
Trigger: GCTGCAGTAGCTGTGGCCTCACCCTGAAGTCAGCGG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
3UTR-3UTR GCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGACAGAAGGGCCTCCCATaGCCTGATGGTCAGGACCTG +
Preference number: 2 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGQKGLP*PDGQDL
Trigger: CAGGTCCTGACCATCAGGGCATGGGAGGCCCTTCTG...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACAGAGCTCCTCCAGATaGTGCCCTCGCTGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQQSSSR*CPRCAS
Trigger: TGAGGCACAGCGAGGGCAGCATCTGGAGGAGCTCTG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAGAGCCTGGTCACCATaGTCCCAGAGCCCGTCTCAC +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGRAWSP*SQSPSH
Trigger: GTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGCCGAGGAAGGGCGGTaGGGAGGGCGGTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: IVLHRNGSLACTTPAELSAEEGR*GGRCGS
Trigger: GCTCCCACACCGCCCTCCTCACCGCCCTTCCTCGGC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGTGGCTGGTTTTTCCTaGGCCCAGCCCTGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWVAGFS*AQPWEV
Trigger: GACCTCCCAGGGCTGGGCTCAGGAAAAACCAGCCAC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTGGTCTCGAACTCCTaGCCTCAAGGATCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLVSNS*PQGSSC
Trigger: GCAGGAGGATCCTTGAGGTCAGGAGTTCGAGACCAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
3UTR-3UTR GCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGGGTAGGTGTGGAGGCTaGAGAGCTCCTCCAGATGCT +
Preference number: 2 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQGRCGG*RAPPDA
Trigger: AGCATCTGGAGGAGCTCTGCAGCCTCCACACCTACC...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGGTAGGTGTGGAGGCTaGAGAGCTCCTCCAGATGCT +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGGRCGG*RAPPDA
Trigger: AGCATCTGGAGGAGCTCTGCAGCCTCCACACCTACC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGGCTTCTTTTCAGCCTaGCAGCTGGCGAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWGFFSA*QLARAR
Trigger: CCTGGCCCTCGCCAGCTGCCAGGCTGAAAAGAAGCC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGGTGAGGAGGGCGGTGTaGGAGCTGAGGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQVRRAV*ELRLLF
Trigger: GAAAAGAAGCCTCAGCTCCCACACCGCCCTCCTCAC...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACAGGGCTGGGGGCCCGTaGTCCACCAGTGGAAGTGAC +
Preference number: 2 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNRAGGP*STSGSD
Trigger: GTCACTTCCACTGGTGGACCACGGGCCCCCAGCCCT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCTAACCTCATCCCAGTaGGTAGAGACTGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGLTSSQ*VETGRG
Trigger: TCCCCTCCCAGTCTCTACTCACTGGGATGAGGTTAG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAGGGCACAGGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGRAQGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCCTGTGCCCT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCAGAGCTCCTCCAGATaGTGCCCTCGCTGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWQSSSR*CPRCAS
Trigger: TGAGGCACAGCGAGGGCAGCATCTGGAGGAGCTCTG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGGAGCTATGGACGTCTaGTTCTCTGCCAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGGAMDV*FSAKGE
Trigger: CTCTCCCTTGGCAGAGAAGCAGACGTCCATAGCTCC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCTCTCCTGGGCTAGGTaGGATTGTGGGTGTCACATG +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGLSWAR*DCGCHM
Trigger: CATGTGACACCCACAATCCCACCTAGCCCAGGAGAG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CAA 90 bp CAAAGCAATAGCTCTCAAGCAGCAGAGCATCTCGAGGAAGAAAGCTaGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGTGTCCACC +
Preference number: 2 (lower is better)
Translates to: QSNSSQAAEHLEEES*PGRHPIMPERAVST
Trigger: GGTGGACACTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGATGCTCTGCTGCTTGAGAGCTATTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACACCAGTGGAAGTGACTaGCGAGGAAGGGCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNTSGSD*RGRAVR
Trigger: CCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGAGCTCCTCCAGATGCTaGCCTCGCTGTGCCTCACAC +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLSSSRC*PRCASH
Trigger: GTGTGAGGCACAGCGAGGGCAGCATCTGGAGGAGCT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGTCGCCATCCCATCATaGCAGAGCGTGCAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWVAIPS*QSVQCP
Trigger: TGGACACTGCACGCTCTGGCATGATGGGATGGCGAC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAGAGCCCGTCTCACTTaGCTTTTCCTTTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGRARLT*LFLCSW
Trigger: CCAGCTGCAAAGGAAAAGCCAAGTGAGACGGGCTCT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGATGGAAGTGGGCTCTaGTGTCAGACTGTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQDGSGL*CQTVVE
Trigger: CTCAACCACAGTCTGACACCAGAGCCCACTTCCATC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGCAACCTCTGCCTCCTaGGCTGCAGTGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWATSAS*AAVILL
Trigger: CAGGAGAATCACTGCAGCCCAGGAGGCAGAGGTTGC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCCAGTGAGTAGAGACTaGGAGGGGAGAGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWPVSRD*EGRAAA
Trigger: AGCTGCTGCTCTCCCCTCCCAGTCTCTACTCACTGG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGAGACTGTGGTTGAGCTaGGACAGACAAGGCCGACAC +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWRLWLS*DRQGRH
Trigger: GTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCT...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGTGTCAGACTGTGGTTaGGCTGAGACAGACAAGGCC +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWVSDCG*AETDKA
Trigger: GGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACAC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGATGCTGCCCTCGCTGTaGCTCACACCAGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLMLPSL*LTPERM
Trigger: CATCCTCTCTGGTGTGAGGCACAGCGAGGGCAGCAT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACACGTCTGGCCATACTaGAGCACTTTAAAGGACGGT +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQHVWPY*STLKDG
Trigger: ACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
3UTR-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCACGTCTGGCCATACTaGAGCACTTTAAAGGACGGT +
Preference number: 2 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGHVWPY*STLKDG
Trigger: ACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACCTCTGCCTCCTGGGCTaGAGTGATTCTCCTGCGTTC +
Preference number: 2 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNLCLLG*SDSPAF
Trigger: GAACGCAGGAGAATCACTGCAGCCCAGGAGGCAGAG...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGCAACCTCTGCCTCCTaGGCTGCAGTGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNATSAS*AAVILL
Trigger: CAGGAGAATCACTGCAGCCCAGGAGGCAGAGGTTGC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGTAAAATCCAATCTTTaGGTGCATGGGGGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: RLGALVRERSYGRLLLCQVKSNL*VHGGGC
Trigger: ACACCCACCCCCATGCACTCAAAGATTGGATTTTAC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGTGCAGTGTCCACCCTTaGCTACGCTGGGGAATTGCT +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLCSVHP*LRWGIA
Trigger: AGCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCA...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACTGCAGTGTCCACCCTTaGCTACGCTGGGGAATTGCT +
Preference number: 2 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNCSVHP*LRWGIA
Trigger: AGCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCA...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGAATGGGTCCCTAGCTTaGACAACCCCAGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWNGSLA*TTPAEL
Trigger: AAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATT...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGACCAGTGGAAGTGACTaGCGAGGAAGGGCGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRTSGSD*RGRAVR
Trigger: CCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGAGAGCCTGGTCACCATaGTCCCAGAGCCCGTCTCAC +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRRAWSP*SQSPSH
Trigger: GTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGATGGAAGTGGGCTCTaGTGTCAGACTGTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLDGSGL*CQTVVE
Trigger: CTCAACCACAGTCTGACACCAGAGCCCACTTCCATC...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCAGAGAGGATGGAAGTaGGCTCTGGTGTCAGACTGT +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLQRGWK*ALVSDC
Trigger: ACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGTATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGT +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLYDGLA*AQRPDS
Trigger: ACTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATA...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGACTTGGCTTTTCCTTTaGAGCTGGACAGCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLTWLFL*SWTAEF
Trigger: GAACTCAGCTGTCCAGCTGCAAAGGAAAAGCCAAGT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTTGGGCTCAGAGGCCTaGCAGTGGGTAATTTCCACT +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRLGSEA*QWVIST
Trigger: AGTGGAAATTACCCACTGTCAGGCCTCTGAGCCCAA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGAATGGGTCCCTAGCTTaGACAACCCCAGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRNGSLA*TTPAEL
Trigger: AAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGAGAGCCCGTCTCACTTaGCTTTTCCTTTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRRARLT*LFLCSW
Trigger: CCAGCTGCAAAGGAAAAGCCAAGTGAGACGGGCTCT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTCACACCAGAGAGGATaGAAGTGGGCTCTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRSHQRG*KWALVS
Trigger: TGACACCAGAGCCCACTTCCATCCTCTCTGGTGTGA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGTGTATTACACAGGAATaGGTCCCTAGCTTGCACAAC +
Preference number: 2 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLCITQE*VPSLHN
Trigger: GTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACA...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTGTCCACCAGTGGAAGTaGCTGCCGAGGAAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGVHQWK*LPRKGG
Trigger: ACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGAC...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATAGACTGTGGTTGAGCTaGGACAGACAAGGCCGACAC +
Preference number: 2 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNRLWLS*DRQGRH
Trigger: GTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCT...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGTGTCAGACTGTGGTTaGGCTGAGACAGACAAGGCC +
Preference number: 2 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNVSDCG*AETDKA
Trigger: GGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACAC...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTCGAGGAAGAAAGCTTaGCCGGTCGCCATCCCATCA +
Preference number: 2 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNSRKKA*PVAIPS
Trigger: TGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGGAGCTATGGACGTCTaGTTCTCTGCCAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNGAMDV*FSAKGE
Trigger: CTCTCCCTTGGCAGAGAAGCAGACGTCCATAGCTCC...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGGCGGTGTGGGAGCTaGGGCTTCTTTTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGRCGS*GFFSAW
Trigger: CCAGGCTGAAAAGAAGCCTCAGCTCCCACACCGCCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTTTTTGGTGTCCTCATaGCCTAACCTCATCCCAGTG +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRFLVSS*PNLIPV
Trigger: CACTGGGATGAGGTTAGGTCATGAGGACACCAAAAA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATCAGAGAGGATGGAAGTaGGCTCTGGTGTCAGACTGT +
Preference number: 2 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNQRGWK*ALVSDC
Trigger: ACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTG...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAGCTCCTCCAGATGCTaGCCTCGCTGTGCCTCACAC +
Preference number: 2 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTSSSRC*PRCASH
Trigger: GTGTGAGGCACAGCGAGGGCAGCATCTGGAGGAGCT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTGTATTACACAGGAATaGGTCCCTAGCTTGCACAAC +
Preference number: 2 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRCITQE*VPSLHN
Trigger: GTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGTTATTTTTAGGTTTTTaGTGTCCTCATGACCTAACC +
Preference number: 2 (lower is better)
Translates to: GGENITKYLLKGAGVRAWLFLGF*CPHDLT
Trigger: GGTTAGGTCATGAGGACACCAAAAACCTAAAAATAA...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCTGGTCTCGAACTCCTaGCCTCAAGGATCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTLVSNS*PQGSSC
Trigger: GCAGGAGGATCCTTGAGGTCAGGAGTTCGAGACCAG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
3UTR-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGCAACCTCTGCCTCCTaGGCTGCAGTGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTATSAS*AAVILL
Trigger: CAGGAGAATCACTGCAGCCCAGGAGGCAGAGGTTGC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
3UTR-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACAAAGCACATTCTCAATaGCGGAGAGAATATTACAAA +
Preference number: 2 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNKAHSQ*RREYYK
Trigger: TTTGTAATATTCTCTCCGCCATTGAGAATGTGCTTT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTCGAGGAAGAAAGCTTaGCCGGTCGCCATCCCATCA +
Preference number: 2 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTSRKKA*PVAIPS
Trigger: TGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR TCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGTAAAATCCAATCTTTaGGTGCATGGGGGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: VECHQLRQELAIFTSFVDVKSNL*VHGGGC
Trigger: ACACCCACCCCCATGCACTCAAAGATTGGATTTTAC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR GCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTACTTGGCTTTTCCTTTaGAGCTGGACAGCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGTWLFL*SWTAEF
Trigger: GAACTCAGCTGTCCAGCTGCAAAGGAAAAGCCAAGT...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCTTTCAATCAAAAGCTaGAAGTCCACCTTACAGAAA +
Preference number: 2 (lower is better)
Translates to: VECHQLRQELAIFTSFVDLSIKS*KSTLQK
Trigger: TTTCTGTAAGGTGGACTTCCAGCTTTTGATTGAAAG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 72 bp AGCCCAGCCCTGGGAGGTCGTGGTAGGTGTGGAGGCTaGAGAGCTCCTCCAGATGCTGCCCTCGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: SPALGGRGRCGG*RAPPDAALAVP
Trigger: AGGCACAGCGAGGGCAGCATCTGGAGGAGCTCTGCAGCCTCCACACCTACCACGACCTCCCAGGGCTGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 72 bp AGGATGGAGCAGCCGGCAGGAGTGGCCGCCTCTTCCTaGTTGGGGAGCAGAAGGGCCTCCCATGCCCTGATG +
Preference number: 3 (lower is better)
Translates to: RMEQPAGVAASS*LGSRRASHALM
Trigger: CATCAGGGCATGGGAGGCCCTTCTGCTCCCCAAGCAGGAAGAGGCGGCCACTCCTGCCGGCTGCTCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494165.1
3UTR TCA 72 bp ATGGAAGTGGGCTCTGGTGTCAGACTGTGGTTGAGCTaGGACAGACAAGGCCGACACAGGGCTGGGGGCCCG +
Preference number: 3 (lower is better)
Translates to: MEVGSGVRLWLS*DRQGRHRAGGP
Trigger: CGGGCCCCCAGCCCTGTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACACCAGAGCCCACTTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR TCA 72 bp AGAGGATGGAAGTGGGCTCTGGTGTCAGACTGTGGTTaGGCTGAGACAGACAAGGCCGACACAGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: RGWKWALVSDCG*AETDKADTGLG
Trigger: CCCCAGCCCTGTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACACCAGAGCCCACTTCCATCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 72 bp TCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATaGCAGAGCGTGCAGTGTCCACCCTTGACTACGCTG +
Preference number: 3 (lower is better)
Translates to: SRKKACPVAIPS*QSVQCPPLTTL
Trigger: CAGCGTAGTCAAGGGTGGACACTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 72 bp GCTCTCAAGCAGCAGAGCATCTCGAGGAAGAAAGCTTaGCCGGTCGCCATCCCATCATGCCAGAGCGTGCAG +
Preference number: 3 (lower is better)
Translates to: ALKQQSISRKKA*PVAIPSCQSVQ
Trigger: CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGATGCTCTGCTGCTTGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CCA 72 bp GAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTaGCTTTTCCTTTGCAGCTGGACAGCTGAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: EPGHHGPRARLT*LFLCSWTAEFS
Trigger: TGAGAACTCAGCTGTCCAGCTGCAAAGGAAAAGCCAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CCA 72 bp CAGTGTCAAAACACACACCCTGCCGTAGCTCTCTCCTaGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCC +
Preference number: 3 (lower is better)
Translates to: QCQNTHPAVALS*ARWDCGCHMLP
Trigger: GGGAAGCATGTGACACCCACAATCCCACCTAGCCCAGGAGAGAGCTACGGCAGGGTGTGTGTTTTGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGTGCAGTGTCCACCCTaGACTACGCTGGGGAATTGC +
Preference number: 3 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNVQCPP*TTLGNC
Trigger: GCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCAC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATGTAAAATCCAATCTTaGAGTGCATGGGGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: RLGALVRERSYGRLLLCQCKIQS*SAWGWV
Trigger: CACCCACCCCCATGCACTCAAAGATTGGATTTTACA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR TCA 72 bp GAGAGTGAGGTAGGCCTGGGCCCGCTGACTTCAGGGTaGGGCCACAGCTACTGCAGCGCTTTTTATTTATTT +
Preference number: 3 (lower is better)
Translates to: ESEVGLGPLTSG*GHSYCSAFYLF
Trigger: AAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAAGTCAGCGGGCCCAGGCCTACCTCACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
3UTR-3UTR CAA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACTCGAGGAAGAAAGCTaGCCCGGTCGCCATCCCATC +
Preference number: 3 (lower is better)
Translates to: IVLHRNGSLACTTPAELSLEEES*PGRHPI
Trigger: GATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGCATTGGTGCAGACATaGTATTACACAGGAATGGGT +
Preference number: 3 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGALVQT*YYTGMG
Trigger: ACCCATTCCTGTGTAATACAATGTCTGCACCAATGC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGTGCAGTGTCCACCCTaGACTACGCTGGGGAATTGC +
Preference number: 3 (lower is better)
Translates to: IVLHRNGSLACTTPAELSVQCPP*TTLGNC
Trigger: GCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCAC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGTTAGGAGCAATTTTTaGTGGGCAGGGGGTGGATCT +
Preference number: 3 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNVRSNF*WAGGGS
Trigger: AGATCCACCCCCTGCCCACAAAAAATTGCTCCTAAC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGGTGGGGAAGGTGTATaGTCACAAGGTCAATTGATC +
Preference number: 3 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNGGEGV*SQGQLI
Trigger: GATCAATTGACCTTGTGACAATACACCTTCCCCACC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTGTAAAATCCAATCTTaGAGTGCATGGGGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRCKIQS*SAWGWV
Trigger: CACCCACCCCCATGCACTCAAAGATTGGATTTTACA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGCATTGGTGCAGACATaGTATTACACAGGAATGGGT +
Preference number: 3 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRALVQT*YYTGMG
Trigger: ACCCATTCCTGTGTAATACAATGTCTGCACCAATGC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR TCA 72 bp TCAAGGGTGGGGAAGGTGTATTGTCACAAGGTCAATTaGTCAGTTAGGGTGGGGCAGGAACAAATCACAATG +
Preference number: 3 (lower is better)
Translates to: SRVGKVYCHKVN*SVRVGQEQITM
Trigger: CATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGTGACAATACACCTTCCCCACCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR GCA 72 bp AACTGGCTATTTTCACTTCTTTTGTGGATCTTCAGTTaGTTCAGGCCATCTGGGTGTATACGTGCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: NWLFSLLLWIFS*FRPSGCIRAGH
Trigger: GTGCCCTGCACGTATACACCCAGATGGCCTGAAGCAACTGAAGATCCACAAAAGAAGTGAAAATAGCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CCA 72 bp AGGTGTATTGTCACAAGGTCAATTGATCAGTTAGGGTaGGGCAGGAACAAATCACAATGGTGGAATGTCATC +
Preference number: 3 (lower is better)
Translates to: RCIVTRSIDQLG*GRNKSQWWNVI
Trigger: GATGACATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGTGACAATACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR-3UTR CAA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAGGACTTTATTAGCATaGGTGCAGACATTGTATTAC +
Preference number: 3 (lower is better)
Translates to: VECHQLRQELAIFTSFVDRTLLA*VQTLYY
Trigger: GTAATACAATGTCTGCACCAATGCTAATAAAGTCCT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGAGGCGGCAGACCAGCTaGGGCAGCATGCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLRRQTS*GSMRPS
Trigger: GCTGGGCCGCATGCTGCCCCAGCTGGTCTGCCGCCT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCGGGCATCCCAGCCCCTaGGCACCAGGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPGHPSP*APGSAA
Trigger: AGCTGCTGACCCTGGTGCCCAGGGGCTGGGATGCCC...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGCCGAGGAAGGGCGGTaGGGAGGGCGGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGAEEGR*GGRCGS
Trigger: GCTCCCACACCGCCCTCCTCACCGCCCTTCCTCGGC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPVWPAR*CSRPGW
Trigger: CCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATAC...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLVWPAR*CSRPGW
Trigger: CCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATAC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCGTGGCCGCCTCTTCCTaGTTGGGGAGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPVAASS*LGSRRA
Trigger: GGCCCTTCTGCTCCCCAAGCAGGAAGAGGCGGCCAC...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR TCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGTGGCTGGTTTTTCCTaGGCCCAGCCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLVAGFS*AQPWEV
Trigger: GACCTCCCAGGGCTGGGCTCAGGAAAAACCAGCCAC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACGCTCAGCCAGGCACTaGCAGATGCCGCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQRSARH*QMPPAT
Trigger: GGTGGCGGGCGGCATCTGCCAGTGCCTGGCTGAGCG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCCTGCTGTTCCCGGCCTaGGTGGTCACGGACATGCAG +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPLLFPA*VVTDMQ
Trigger: CTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAG...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCACCAGGGTCAGCAGCTaGGGCGTGTGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPTRVSS*GVCCST
Trigger: TGTGGAGCAGCACACGCCCCAGCTGCTGACCCTGGT...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGACACACCCCGAGGGCCTaGCAGGTGGTGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGHTPRA*QVVWAS
Trigger: GGATGCCCACACCACCTGCCAGGCCCTCGGGGTGTG...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp GGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTCCAGCAGCCGGCAGGAGTaGCCGCCTCTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSGKGVFLMASQKPSGASSSRQE*PPLPAW
Trigger: CCAAGCAGGAAGAGGCGGCCACTCCTGCCGGCTGCT...GGAGGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTGTGGTATGGCCTaGTCGCTGCTGTTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGACGMA*SLLFPA
Trigger: GGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGC...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCCTGATGGTCAGGACCTaGCCCCTTACCTCCCCGCAA +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPLMVRT*PLTSPQ
Trigger: TTGCGGGGAGGTAAGGGGGCAGGTCCTGACCATCAG...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp CAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCATTCTGGGCGGGGCAGTaGTCGGGGTCCGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: QCSGSGKGVFLMASQKPSFWAGQ*SGSGKG
Trigger: ACCCTTTCCGGACCCCGAGCACTGCCCCGCCCAGAA...TGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACCAGGCAGCAGTGCCTaGGCCACAGAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQPGSSA*ATERGQ
Trigger: CTGCCCACGCTCTGTGGCCCAGGCACTGCTGCCTGG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGCAGAACTCAGGGCCCTaGGCACAGGCCAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLQNSGP*AQAKDE
Trigger: CTCATCCTTGGCCTGTGCCCAGGGCCCTGAGTTCTG...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLTDMQR*HSESRG
Trigger: GCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTGTTCCCGGCCTGGGTaGTCACGGACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPCSRPG*SRTCRG
Trigger: ACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACA...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGGCATCCCAGCCCCTaGGCACCAGGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGHPSP*APGSAA
Trigger: AGCTGCTGACCCTGGTGCCCAGGGGCTGGGATGCCC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGGGCATCCCAGCCCCTaGGCACCAGGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGGHPSP*APGSAA
Trigger: AGCTGCTGACCCTGGTGCCCAGGGGCTGGGATGCCC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTCCTTACCTCCCCGCAACTaGGGGCCTGGACTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GSGKGVFLMASQKPSGASLPPRN*GPGLTW
Trigger: CCAGGTGAGTCCAGGCCCCCAGTTGCGGGGAGGTAA...GGAGGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR TCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGCTGGTCTCGAACTCCTaGCCTCAAGGATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLLVSNS*PQGSSC
Trigger: GCAGGAGGATCCTTGAGGTCAGGAGTTCGAGACCAG...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACCAGGCACTGGCAGATaGCGCCCGCCACCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQPGTGR*RPPPEV
Trigger: TACCTCTGGTGGCGGGCGGCATCTGCCAGTGCCTGG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQVWPAR*CSRPGW
Trigger: CCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATAC...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQVWPAR*CSRPGW
Trigger: CCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATAC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGGTAGGTGTGGAGGCTaGAGAGCTCCTCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLGRCGG*RAPPDA
Trigger: AGCATCTGGAGGAGCTCTGCAGCCTCCACACCTACC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCCAGAAGGGCCTCCCATaGCCTGATGGTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SGSGKGVFLMASQKPSGAQKGLP*PDGQDL
Trigger: CAGGTCCTGACCATCAGGGCATGGGAGGCCCTTCTG...GGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp TCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCAGGAGCCTCCAGCTGTaGGGTGAGAGGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SGSGKGVFLMASQKPSGARSLQL*GEREDG
Trigger: TCCATCCTCCCTCTCACCGCACAGCTGGAGGCTCCT...GGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGTCCAGCAGAGGGTCTaGCAGAGGGTCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQVQQRV*QRVPQR
Trigger: CCTCTGCGGGACCCTCTGCCAGACCCTCTGCTGGAC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAACCACGCGGCACACCTaGGCCACTGCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQTTRHT*ATATAS
Trigger: GCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTACACTGGAGAGGGCTaGACATGGTCCCACACACCC +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPYTGEG*TWSHTP
Trigger: GGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTA...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPGLWIH*RGLDMV
Trigger: GACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCC...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGTGAGGAGGGCGGTGTaGGAGCTGAGGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLVRRAV*ELRLLF
Trigger: GAAAAGAAGCCTCAGCTCCCACACCGCCCTCCTCAC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCATGGGCACTCAGTGACTaGGGTTCTGGGCGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QCSGSGKGVFLMASQKPSWALSD*GSGRGS
Trigger: ACTGCCCCGCCCAGAACCCCAGTCACTGAGTGCCCA...TGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR TCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGGGCACAGGCCAAGGATaGGGTGGTCCAGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQGTGQG*GGPGSS
Trigger: ACTGCTGCCTGGACCACCTCATCCTTGGCCTGTGCC...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGCACAGGCCAAGGATaGGGTGGTCCAGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGTGQG*GGPGSS
Trigger: ACTGCTGCCTGGACCACCTCATCCTTGGCCTGTGCC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGCGTGTCGAGCAGGATaGCGGAGTAGCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQACRAG*RSSAQP
Trigger: TGGCTGAGCGCTACTCCGTCATCCTGCTCGACACGC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGTCCACCAGTGGAAGTaGCTGCCGAGGAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGVHQWK*LPRKGG
Trigger: ACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGAC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGAGGGCACAGGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLRAQGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCCTGTGCCCT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATGCTCTGGCTCTGGCTaGCGGGATTTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQCSGSG*RDLHRP
Trigger: GGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGAGCA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGAGCAGCTGGGGCGTGTaGTGCTCCACAAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLSSWGV*CSTNCL
Trigger: CAAGCAATTTGTGGAGCAGCACACGCCCCAGCTGCT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCCAGGCAGCAGTGCCTaGGCCACAGAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWPGSSA*ATERGQ
Trigger: CTGCCCACGCTCTGTGGCCCAGGCACTGCTGCCTGG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGGGTCCCGCAGAGGTTTaGGCAGGGGGTCTGACATCC +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQGPAEV*AGGLTS
Trigger: GGATGTCAGACCCCCTGCCCAAACCTCTGCGGGACC...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACAGCGCTGTCATCCATaGAGCACCGGAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQQRCHP*STGGRG
Trigger: GCCTCGTCCTCCGGTGCTCCATGGATGACAGCGCTG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGTDMQR*HSESRG
Trigger: GCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGT...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTGCTGTTCCCGGCCTaGGTGGTCACGGACATGCAG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLLFPA*VVTDMQ
Trigger: CTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTCCCTGGAGCATTGCCTGTaGTATGGCCTGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSGKGVFLMASQKPSGASLEHCL*YGLLAA
Trigger: AGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAG...GGAGGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGAGCCAACACAGGCCTaGAGCATTGCCTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLEPTQA*SIACGM
Trigger: CATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAACCAGGGTCAGCAGCTaGGGCGTGTGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQTRVSS*GVCCST
Trigger: TGTGGAGCAGCACACGCCCCAGCTGCTGACCCTGGT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCCACTGCAGCAGGTGTaGCTCAGCCATGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGPLQQV*LSHGTS
Trigger: AGAGGTGCCATGGCTGAGTCACACCTGCTGCAGTGG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACCACTGCAGCAGGTGTaGCTCAGCCATGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQPLQQV*LSHGTS
Trigger: AGAGGTGCCATGGCTGAGTCACACCTGCTGCAGTGG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGTTGCACTGGGGCATaGGCAGCTTCAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGCTGA*AASRGG
Trigger: TCCTCCCCTTGAAGCTGCTCATGCCCCAGTGCAACC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGTTGCAGCTGGACAGCTaGGTTCTCATCAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLLQLDS*VLIKGR
Trigger: CCGACCTTTGATGAGAACTCAGCTGTCCAGCTGCAA...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCACTCACCTGGACAGCTaGGTTCTCATCAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPTHLDS*VLIKGR
Trigger: CCGACCTTTGATGAGAACTCAGCTGTCCAGGTGAGT...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR TCA 90 bp TCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCGAAAGGGTGTTTTCCTaGTGGCCAGCCAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGSGKGVFLMASQKPSGAERVFS*WPARSP
Trigger: AGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTC...GGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGCAGCCTGGGTACCCTaGTTGGTGCATGGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQAAWVP*LVHGPL
Trigger: TAAGGGGCCATGCACCAAGCAGGGTACCCAGGCTGC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACAGCCATGGCACCTCTaGAGCCTGGGTACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQQPWHL*SLGTLL
Trigger: AAGCAGGGTACCCAGGCTGCAGAGGTGCCATGGCTG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAAGCAGCAGCAGCCACTaGAGCAGGTGTGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQSSSSH*SRCDSA
Trigger: GGCTGAGTCACACCTGCTGCAGTGGCTGCTGCTGCT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAGCAGCAGCAGCCACTaGAGCAGGTGTGACTCAGCC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGSSSSH*SRCDSA
Trigger: GGCTGAGTCACACCTGCTGCAGTGGCTGCTGCTGCT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGAATGCCCTAGGGCTCTaGACTGCAATGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLNALGL*TAMLAP
Trigger: TGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTGGCTGCCGGGATTTaGACAGGCCCAGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLAAGI*TGPGAY
Trigger: GTATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp CAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGGTGGTCACGGACATaGAGAGGTGGCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QCSGSGKGVFLMASQKPSGWSRT*RGGTQS
Trigger: ACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCC...TGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGCCTGTGGTATGGCCTaGTCGCTGCTGTTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWACGMA*SLLFPA
Trigger: GGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCAGCTGGGGCGTGTGCTaGTCCACAAATTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SGSGKGVFLMASQKPSGASWGVC*STNCLH
Trigger: GTGCAAGCAATTTGTGGAGCAGCACACGCCCCAGCT...GGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGTGTGACTCAGCCATaGCACCTCTGCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGVTQP*HLCSLG
Trigger: ACCCAGGCTGCAGAGGTGCCATGGCTGAGTCACACC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAAGGCCAAGGATGAGGTaGTCCAGGCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQRPRMR*SRQQCL
Trigger: CAGGCACTGCTGCCTGGACCACCTCATCCTTGGCCT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACAGAACTCAGGGCCCTaGGCACAGGCCAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQQNSGP*AQAKDE
Trigger: CTCATCCTTGGCCTGTGCCCAGGGCCCTGAGTTCTG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGATGTCCTCACACTCTTaGCATAGGTCATCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLMSSHS*HRSSAP
Trigger: GGGAGCCGATGACCTATGCCAAGAGTGTGAGGACAT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCGCTCAGCCAGGCACTaGCAGATGCCGCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDRSARH*QMPPAT
Trigger: GGTGGCGGGCGGCATCTGCCAGTGCCTGGCTGAGCG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGGCGGCAGACCAGCTaGGGCAGCATGCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDRRQTS*GSMRPS
Trigger: GCTGGGCCGCATGCTGCCCCAGCTGGTCTGCCGCCT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQTDMQR*HSESRG
Trigger: GCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATGTTCCCGGCCTGGGTaGTCACGGACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQCSRPG*SRTCRG
Trigger: ACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGTGTTCCCGGCCTGGGTaGTCACGGACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQCSRPG*SRTCRG
Trigger: ACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACA...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGAGAGCCCGTCTCACTTaGCTTTTCCTTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLRARLT*LFLCSW
Trigger: CCAGCTGCAAAGGAAAAGCCAAGTGAGACGGGCTCT...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGAGAGCCTGGTCACCATaGTCCCAGAGCCCGTCTCAC +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQRAWSP*SQSPSH
Trigger: GTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCT...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGCAGAGAGGATGGAAGTaGGCTCTGGTGTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLQRGWK*ALVSDC
Trigger: ACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTG...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGGGTACCCTGCTTGGTaGATGGCCCCTTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGGYPAW*MAPYSW
Trigger: CCAGCTATAAGGGGCCATGCACCAAGCAGGGTACCC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393822.7
CDS-3UTR GCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGCCTGTGGTATGGCCTaGTCGCTGCTGTTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNACGMA*SLLFPA
Trigger: GGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAAGCAGCTGGGGCGTGTaGTGCTCCACAAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGSSWGV*CSTNCL
Trigger: CAAGCAATTTGTGGAGCAGCACACGCCCCAGCTGCT...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGTCCAGCAGAGGGTCTaGCAGAGGGTCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLVQQRV*QRVPQR
Trigger: CCTCTGCGGGACCCTCTGCCAGACCCTCTGCTGGAC...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGACCACGCGGCACACCTaGGCCACTGCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLTTRHT*ATATAS
Trigger: GCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACACCACGCGGCACACCTaGGCCACTGCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNTTRHT*ATATAS
Trigger: GCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTGGAGCATTGCCTGTaGTATGGCCTGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLEHCL*YGLLAA
Trigger: AGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGAGCCAACACAGGCCTaGAGCATTGCCTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGEPTQA*SIACGM
Trigger: CATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTC...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCACACCCCGAGGGCCTaGCAGGTGGTGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDHTPRA*QVVWAS
Trigger: GGATGCCCACACCACCTGCCAGGCCCTCGGGGTGTG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGTACACTGGAGAGGGCTaGACATGGTCCCACACACCC +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQYTGEG*TWSHTP
Trigger: GGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTA...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGLWIH*RGLDMV
Trigger: GACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGAGGGCTGGGGGCCCGTaGTCCACCAGTGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLRAGGP*STSGSD
Trigger: GTCACTTCCACTGGTGGACCACGGGCCCCCAGCCCT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGCAACCTCTGCCTCCTaGGCTGCAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGATSAS*AAVILL
Trigger: CAGGAGAATCACTGCAGCCCAGGAGGCAGAGGTTGC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGTGCGGGCGTGGGGTaGGTGGGGAGAATATTACAA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGAGVG*VGRILQ
Trigger: TTGTAATATTCTCCCCACCCACCCCACGCCCGCACC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGGGCCTGGACTCACCTaGACAGCTGAGTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: CSGSGKGVFLMASQKPSGGPGLT*TAEFSS
Trigger: TGATGAGAACTCAGCTGTCCAGGTGAGTCCAGGCCC...TCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR TCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGTGGCTTGGATCCGCTTaGTCAGAGCCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWWLGSA*SEPCRA
Trigger: GGCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCA...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGCGTGTCGAGCAGGATaGCGGAGTAGCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNACRAG*RSSAQP
Trigger: TGGCTGAGCGCTACTCCGTCATCCTGCTCGACACGC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGTGGCTGGTTTTTCCTaGGCCCAGCCCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLVAGFS*AQPWEV
Trigger: GACCTCCCAGGGCTGGGCTCAGGAAAAACCAGCCAC...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGTAAAATCCAATCTTTaGGTGCATGGGGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLVKSNL*VHGGGC
Trigger: ACACCCACCCCCATGCACTCAAAGATTGGATTTTAC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTAACCTCATCCCAGTaGGTAGAGACTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLTSSQ*VETGRG
Trigger: TCCCCTCCCAGTCTCTACTCACTGGGATGAGGTTAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGAGGGCACAGGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQRAQGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCCTGTGCCCT...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTGGTCCAGGCAGCAGTaGCTGGGCCACAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDWSRQQ*LGHRAW
Trigger: CCACGCTCTGTGGCCCAGGCACTGCTGCCTGGACCA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCTGCACTGCAATGCTTaGTCCAGGCTTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGLHCNA*SRLWHQ
Trigger: CTGGTGCCAAAGCCTGGAGCAAGCATTGCAGTGCAG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCCTAGGGCTCTGCACTaGAATGCTTGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGPRALH*NACSRL
Trigger: AAGCCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAACTTCCTGTAGGCAATaGCCTAGGGCTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQTSCRQ*PRALHC
Trigger: GCAGTGCAGAGCCCTAGGGCATTGCCTACAGGAAGT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTACTTCCTGTAGGCAATaGCCTAGGGCTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGTSCRQ*PRALHC
Trigger: GCAGTGCAGAGCCCTAGGGCATTGCCTACAGGAAGT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCCAGGCACTGGCAGATaGCGCCCGCCACCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDPGTGR*RPPPEV
Trigger: TACCTCTGGTGGCGGGCGGCATCTGCCAGTGCCTGG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp GGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTCCGCTCCACAAATTGCTTaGACTTTTCCCTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGKGVFLMASQKPSGASAPQIA*TFPCPA
Trigger: GGCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGC...GGAGGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGTGCTGCTCCACAAATTaGTTGCACTTTTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLCCSTN*LHFSLS
Trigger: GGACAGGGAAAAGTGCAAGCAATTTGTGGAGCAGCA...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAGCTGGGGCGTGTGCTaGTCCACAAATTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGSWGVC*STNCLH
Trigger: GTGCAAGCAATTTGTGGAGCAGCACACGCCCCAGCT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGACCAGTGGAAGTGACTaGCGAGGAAGGGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWTSGSD*RGRAVR
Trigger: CCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGT...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGGGAGCTATGGACGTCTaGTTCTCTGCCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQGAMDV*FSAKGE
Trigger: CTCTCCCTTGGCAGAGAAGCAGACGTCCATAGCTCC...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGTTGTGGATCTTCAGTTaGTTCAGGCCATCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLLWIFS*FRPSGC
Trigger: ACACCCAGATGGCCTGAAGCAACTGAAGATCCACAA...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTTCAAAACACACACCCTaGCGTAGCTCTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGSKHTP*RSSLLG
Trigger: GCCCAGGAGAGAGCTACGGCAGGGTGTGTGTTTTGA...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCTCCTGCTCTGGCTCTaGCTGCCGGGATTTGCACAG +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWLLLWL*LPGFAQ
Trigger: CTGTGCAAATCCCGGCAGCCAGAGCCAGAGCAGGAG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACACCACGCGGCACACCTaGGCCACTGCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDTTRHT*ATATAS
Trigger: GCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACGGGCGTGGGGTGGGTaGGGAGAATATTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQRAWGG*GEYYKA
Trigger: TGCTTTGTAATATTCTCCCCACCCACCCCACGCCCG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCTGGCGCTTGAACGGTaGAGGTGTGGAGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLLALER*RCGARG
Trigger: GCCTCTGGCTCCACACCTCCACCGTTCAAGCGCCAG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
3UTR CAA 72 bp AGCTCTCAAGCAGCAGAGCATCTCGAGGAAGAAAGCTaGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SSQAAEHLEEES*PGRHPIMPERA
Trigger: TGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGATGCTCTGCTGCTTGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQSGSSR*PGGSSR
Trigger: ACGACTACTTCCCCCTGGTCATCGACTACTTCCAGA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTTTGGGCAGGGGGTCTaGCATCCCTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDFGQGV*HPWLLL
Trigger: GAGCAGGAGCCAGGGATGTCAGACCCCCTGCCCAAA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGTGGCTTGGATCCGCTTaGTCAGAGCCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLWLGSA*SEPCRA
Trigger: GGCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCA...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGCGTGTCGAGCAGGATaGCGGAGTAGCGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDACRAG*RSSAQP
Trigger: TGGCTGAGCGCTACTCCGTCATCCTGCTCGACACGC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATTGCAGCTGGACAGCTaGGTTCTCATCAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLQLDS*VLIKGR
Trigger: CCGACCTTTGATGAGAACTCAGCTGTCCAGCTGCAA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGGCTGGGAGCGCTTGTaGGGGAGAGGAGCTATGGAC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDGWERL*GRGAMD
Trigger: GTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTTTGGGCTCAGAGGCCTaGCAGTGGGTAATTTCCACT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGLGSEA*QWVIST
Trigger: AGTGGAAATTACCCACTGTCAGGCCTCTGAGCCCAA...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAAATGCCCTAGGGCTCTaGACTGCAATGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQNALGL*TAMLAP
Trigger: TGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGAGGACGTTGCACTCCTaGTCCAGGAACTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQRTLHS*SRNFLI
Trigger: GATGAGGAAGTTCCTGGAGCAGGAGTGCAACGTCCT...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATTGCACAGGCCCAGGTaGATACAGATGCCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLHRPR*IQMPFE
Trigger: CTCAAACGGCATCTGTATGCACCTGGGCCTGTGCAA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp GGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTCCTGCTGCTCCACAAATTaGTTGCACTTTTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSGKGVFLMASQKPSGASCCSTN*LHFSLS
Trigger: GGACAGGGAAAAGTGCAAGCAATTTGTGGAGCAGCA...GGAGGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGGTAGGTGTGGAGGCTaGAGAGCTCCTCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWGRCGG*RAPPDA
Trigger: AGCATCTGGAGGAGCTCTGCAGCCTCCACACCTACC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACACCCTGCTTGGTGCATaGCCCCTTATAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNTLLGA*PLIAGR
Trigger: CCGCCCAGCTATAAGGGGCCATGCACCAAGCAGGGT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393822.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATTCCTCATCGTGTCCTaGAAAATGGCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQFLIVS*KMASLA
Trigger: GGCCAAGGAGGCCATTTTCCAGGACACGATGAGGAA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCTCCTGCTCTGGCTCTaGCTGCCGGGATTTGCACAG +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLLLLWL*LPGFAQ
Trigger: CTGTGCAAATCCCGGCAGCCAGAGCCAGAGCAGGAG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGGTCCCGCAGAGGTTTaGGCAGGGGGTCTGACATCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDGPAEV*AGGLTS
Trigger: GGATGTCAGACCCCCTGCCCAAACCTCTGCGGGACC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACACCAGGGTCAGCAGCTaGGGCGTGTGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDTRVSS*GVCCST
Trigger: TGTGGAGCAGCACACGCCCCAGCTGCTGACCCTGGT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGCACACCCCGAGGGCCTaGCAGGTGGTGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRHTPRA*QVVWAS
Trigger: GGATGCCCACACCACCTGCCAGGCCCTCGGGGTGTG...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACAGAGCCTGGTCACCATaGTCCCAGAGCCCGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNRAWSP*SQSPSH
Trigger: GTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTGGCTTGGATCCGCTTaGTCAGAGCCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDWLGSA*SEPCRA
Trigger: GGCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGTCACATGCTTCCCTGTaGAGAGACTACCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQSHASL*RDYQTG
Trigger: GCCTGTTTGGTAGTCTCTTCACAGGGAAGCATGTGA...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTGGTCCAGGCAGCAGTaGCTGGGCCACAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRWSRQQ*LGHRAW
Trigger: CCACGCTCTGTGGCCCAGGCACTGCTGCCTGGACCA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACCAGGTGCATACAGATaGCGTTTGAGTCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQPGAYR*RLSQSG
Trigger: ACCAGACTGACTCAAACGGCATCTGTATGCACCTGG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCCAGGTGCATACAGATaGCGTTTGAGTCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGPGAYR*RLSQSG
Trigger: ACCAGACTGACTCAAACGGCATCTGTATGCACCTGG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCTGGCTGCCGGGATTTaGACAGGCCCAGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLAAGI*TGPGAY
Trigger: GTATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGAGAGGAATGGGGAATTaGTGCTCGGAGAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQRGMGN*CSERSC
Trigger: ACAGGATCTCTCCGAGCAGCAATTCCCCATTCCTCT...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACCAGGCACTGGCAGATaGCGCCCGCCACCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSPGTGR*RPPPEV
Trigger: TACCTCTGGTGGCGGGCGGCATCTGCCAGTGCCTGG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGCTCCACAAATTGCTTaGACTTTTCCCTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQAPQIA*TFPCPA
Trigger: GGCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACACCCTGCTTGGTGCATaGCCCCTTATAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDTLLGA*PLIAGR
Trigger: CCGCCCAGCTATAAGGGGCCATGCACCAAGCAGGGT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409383.6
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCCTGGGTACCCTGCTTaGTGCATGGCCCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLPGYPA*CMAPYS
Trigger: GCTATAAGGGGCCATGCACCAAGCAGGGTACCCAGG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393822.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGGCACCTCTGCAGCCTaGGTACCCTGCTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDGTSAA*VPCLVH
Trigger: ATGCACCAAGCAGGGTACCCAGGCTGCAGAGGTGCC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409383.6
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATCGTGTCCTGGAAAATaGCCTCCTTGGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQSCPGK*PPWPSC
Trigger: ACAAGATGGCCAAGGAGGCCATTTTCCAGGACACGA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCTCCTGCTCTGGCTCTaGCTGCCGGGATTTGCACAG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLLLWL*LPGFAQ
Trigger: CTGTGCAAATCCCGGCAGCCAGAGCCAGAGCAGGAG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATTGGGAATCATGGCTTaGATCCGCTTGATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLGIMA*IRLIRA
Trigger: GGCTCTGATCAAGCGGATCCAAGCCATGATTCCCAA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDTDMQR*HSESRG
Trigger: GCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNGLWIH*RGLDMV
Trigger: GACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCATTTGGGCAGGGGGTCTaGCATCCCTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSFGQGV*HPWLLL
Trigger: GAGCAGGAGCCAGGGATGTCAGACCCCCTGCCCAAA...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGGGCGGTGTGGGAGCTaGGGCTTCTTTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRGRCGS*GFFSAW
Trigger: CCAGGCTGAAAAGAAGCCTCAGCTCCCACACCGCCC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGTCCACCAGTGGAAGTaGCTGCCGAGGAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRVHQWK*LPRKGG
Trigger: ACCGCCCTTCCTCGGCAGTCACTTCCACTGGTGGAC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACCGCTGACTTCAGGGTaGGGCCACAGCTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSPLTSG*GHSYCS
Trigger: GCTGCAGTAGCTGTGGCCTCACCCTGAAGTCAGCGG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGGCTGGGAGCGCTTGTaGGGGAGAGGAGCTATGGAC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSGWERL*GRGAMD
Trigger: GTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCTAACCTCATCCCAGTaGGTAGAGACTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLLTSSQ*VETGRG
Trigger: TCCCCTCCCAGTCTCTACTCACTGGGATGAGGTTAG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAAATCCAGGAGCCAATaGATTGTGTGTCTCATCCCC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGKSRSQ*IVCLIP
Trigger: GGGGATGAGACACACAATTCATTGGCTCCTGGATTT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTTTTTCTGGACAGCTaGGTTCTCATCAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLFLDS*VLIKGR
Trigger: CCGACCTTTGATGAGAACTCAGCTGTCCAGAAAAAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGGGTACCCTGCTTGGTaGATGGCCCCTTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDGYPAW*MAPYSW
Trigger: CCAGCTATAAGGGGCCATGCACCAAGCAGGGTACCC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409383.6
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCATGCTCTGGCTCTGGCTaGCGGGATTTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSCSGSG*RDLHRP
Trigger: GGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGAGCA...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGGAATGGGGAATTGCTaGTCGGAGAGATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWGMGNC*SERSCV
Trigger: CACACAGGATCTCTCCGAGCAGCAATTCCCCATTCC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGGGTGGTCACGGACATaGAGAGGTGGCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDGWSRT*RGGTQS
Trigger: ACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGTGCTGCTCCACAAATTaGTTGCACTTTTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQCCSTN*LHFSLS
Trigger: GGACAGGGAAAAGTGCAAGCAATTTGTGGAGCAGCA...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTACTTGGCTTTTCCTTTaGAGCTGGACAGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGTWLFL*SWTAEF
Trigger: GAACTCAGCTGTCCAGCTGCAAAGGAAAAGCCAAGT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACTCAAAACACACACCCTaGCGTAGCTCTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNSKHTP*RSSLLG
Trigger: GCCCAGGAGAGAGCTACGGCAGGGTGTGTGTTTTGA...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGGCCCAAGAGCAGGCTaGATAGACAGCTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNGPRAG*IDSSFW
Trigger: CCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCCTGGGTACCCTGCTTaGTGCATGGCCCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDPGYPA*CMAPYS
Trigger: GCTATAAGGGGCCATGCACCAAGCAGGGTACCCAGG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409383.6
CDS-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGGTCCCGCAGAGGTTTaGGCAGGGGGTCTGACATCC +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRGPAEV*AGGLTS
Trigger: GGATGTCAGACCCCCTGCCCAAACCTCTGCGGGACC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCAGCTAGCGCACCCTTaGGAATCATGGCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLQLAHP*ESWLGS
Trigger: GGATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACAGCGCTGTCATCCATaGAGCACCGGAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSQRCHP*STGGRG
Trigger: GCCTCGTCCTCCGGTGCTCCATGGATGACAGCGCTG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTACACTGGAGAGGGCTaGACATGGTCCCACACACCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDYTGEG*TWSHTP
Trigger: GGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGGATGGAAGTGGGCTCTaGTGTCAGACTGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWDGSGL*CQTVVE
Trigger: CTCAACCACAGTCTGACACCAGAGCCCACTTCCATC...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCCAGTGAGTAGAGACTaGGAGGGGAGAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDPVSRD*EGRAAA
Trigger: AGCTGCTGCTCTCCCCTCCCAGTCTCTACTCACTGG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATTTGTGGGCAGGGGGTaGATCTTACAAAGCACATTC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQFVGRG*ILQSTF
Trigger: GAATGTGCTTTGTAAGATCCACCCCCTGCCCACAAA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACCTCTCCTGGGCTAGGTaGGATTGTGGGTGTCACATG +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNLSWAR*DCGCHM
Trigger: CATGTGACACCCACAATCCCACCTAGCCCAGGAGAG...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGGTTGCACTGGGGCATaGGCAGCTTCAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRGCTGA*AASRGG
Trigger: TCCTCCCCTTGAAGCTGCTCATGCCCCAGTGCAACC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCTAACCTCATCCCAGTaGGTAGAGACTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLTSSQ*VETGRG
Trigger: TCCCCTCCCAGTCTCTACTCACTGGGATGAGGTTAG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCTGCACTGCAATGCTTaGTCCAGGCTTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLHCNA*SRLWHQ
Trigger: CTGGTGCCAAAGCCTGGAGCAAGCATTGCAGTGCAG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCCTAGGGCTCTGCACTaGAATGCTTGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDPRALH*NACSRL
Trigger: AAGCCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGAATGCCCTAGGGCTCTaGACTGCAATGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLNALGL*TAMLAP
Trigger: TGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCCAGGTGCATACAGATaGCGTTTGAGTCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWPGAYR*RLSQSG
Trigger: ACCAGACTGACTCAAACGGCATCTGTATGCACCTGG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACTGGCTGCCGGGATTTaGACAGGCCCAGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSLAAGI*TGPGAY
Trigger: GTATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGCTGGGGCGTGTGCTaGTCCACAAATTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDSWGVC*STNCLH
Trigger: GTGCAAGCAATTTGTGGAGCAGCACACGCCCCAGCT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGCAGCTGGGGCGTGTaGTGCTCCACAAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDSSWGV*CSTNCL
Trigger: CAAGCAATTTGTGGAGCAGCACACGCCCCAGCTGCT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAAGCTCCTCCAGATGCTaGCCTCGCTGTGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSSSSRC*PRCASH
Trigger: GTGTGAGGCACAGCGAGGGCAGCATCTGGAGGAGCT...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACAGAGCTCCTCCAGATaGTGCCCTCGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSQSSSR*CPRCAS
Trigger: TGAGGCACAGCGAGGGCAGCATCTGGAGGAGCTCTG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGGAGCTATGGACGTCTaGTTCTCTGCCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDGAMDV*FSAKGE
Trigger: CTCTCCCTTGGCAGAGAAGCAGACGTCCATAGCTCC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGAGGCCAAGGATGAGGTaGTCCAGGCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRRPRMR*SRQQCL
Trigger: CAGGCACTGCTGCCTGGACCACCTCATCCTTGGCCT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAAGGCCAAGGATGAGGTaGTCCAGGCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSRPRMR*SRQQCL
Trigger: CAGGCACTGCTGCCTGGACCACCTCATCCTTGGCCT...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCAGCTAGCGCACCCTTaGGAATCATGGCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDQLAHP*ESWLGS
Trigger: GGATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCGCTCAGCCAGGCACTaGCAGATGCCGCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDRSARH*QMPPAT
Trigger: GGTGGCGGGCGGCATCTGCCAGTGCCTGGCTGAGCG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAGGCGGCAGACCAGCTaGGGCAGCATGCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDRRQTS*GSMRPS
Trigger: GCTGGGCCGCATGCTGCCCCAGCTGGTCTGCCGCCT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTGTTCCCGGCCTGGGTaGTCACGGACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRCSRPG*SRTCRG
Trigger: ACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCTTTTCCTTTGCAGCTaGACAGCTGAGTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGLFLCS*TAEFSS
Trigger: TGATGAGAACTCAGCTGTCCAGCTGCAAAGGAAAAG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGCTTTTCCTTTGCAGCTaGACAGCTGAGTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQLFLCS*TAEFSS
Trigger: TGATGAGAACTCAGCTGTCCAGCTGCAAAGGAAAAG...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGAGAGCCCGTCTCACTTaGCTTTTCCTTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLRARLT*LFLCSW
Trigger: CCAGCTGCAAAGGAAAAGCCAAGTGAGACGGGCTCT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACTCACACCAGAGAGGATaGAAGTGGGCTCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNSHQRG*KWALVS
Trigger: TGACACCAGAGCCCACTTCCATCCTCTCTGGTGTGA...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDSGSSR*PGGSSR
Trigger: ACGACTACTTCCCCCTGGTCATCGACTACTTCCAGA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTTTGGGCAGGGGGTCTaGCATCCCTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNFGQGV*HPWLLL
Trigger: GAGCAGGAGCCAGGGATGTCAGACCCCCTGCCCAAA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATCCGCTGACTTCAGGGTaGGGCCACAGCTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNPLTSG*GHSYCS
Trigger: GCTGCAGTAGCTGTGGCCTCACCCTGAAGTCAGCGG...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGGCTGGGAGCGCTTGTaGGGGAGAGGAGCTATGGAC +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNGWERL*GRGAMD
Trigger: GTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCC...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGTTTTTGGTGTCCTCATaGCCTAACCTCATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWFLVSS*PNLIPV
Trigger: CACTGGGATGAGGTTAGGTCATGAGGACACCAAAAA...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGAAATCCAGGAGCCAATaGATTGTGTGTCTCATCCCC +
Preference number: 4 (lower is better)
Translates to: GGENITKYLLKGAGVRAWKSRSQ*IVCLIP
Trigger: GGGGATGAGACACACAATTCATTGGCTCCTGGATTT...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGGACGTTGCACTCCTaGTCCAGGAACTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDRTLHS*SRNFLI
Trigger: GATGAGGAAGTTCCTGGAGCAGGAGTGCAACGTCCT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGGGTGGTCACGGACATaGAGAGGTGGCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSGWSRT*RGGTQS
Trigger: ACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCTCCACAAATTGCTTaGACTTTTCCCTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLAPQIA*TFPCPA
Trigger: GGCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGC...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGTCGCCATCCCATCATaGCAGAGCGTGCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSVAIPS*QSVQCP
Trigger: TGGACACTGCACGCTCTGGCATGATGGGATGGCGAC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCCAGGCAGCAGTGCCTaGGCCACAGAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDPGSSA*ATERGQ
Trigger: CTGCCCACGCTCTGTGGCCCAGGCACTGCTGCCTGG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACATGTCCTCACACTCTTaGCATAGGTCATCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDMSSHS*HRSSAP
Trigger: GGGAGCCGATGACCTATGCCAAGAGTGTGAGGACAT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAATCTTGTTAAGGATGTaGACGATGTCCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQILLRM*TMSSHS
Trigger: AGAGTGTGAGGACATCGTCCACATCCTTAACAAGAT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGTCGTGTCCTGGAAAATaGCCTCCTTGGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLSCPGK*PPWPSC
Trigger: ACAAGATGGCCAAGGAGGCCATTTTCCAGGACACGA...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTTCCTCATCGTGTCCTaGAAAATGGCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDFLIVS*KMASLA
Trigger: GGCCAAGGAGGCCATTTTCCAGGACACGATGAGGAA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGCACTTGGTTGCACTaGGGCATGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDSTWLH*GMSSFK
Trigger: CTTGAAGCTGCTCATGCCCCAGTGCAACCAAGTGCT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATCTGCTGTTCCCGGCCTaGGTGGTCACGGACATGCAG +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNLLFPA*VVTDMQ
Trigger: CTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAG...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCACACCCCGAGGGCCTaGCAGGTGGTGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDHTPRA*QVVWAS
Trigger: GGATGCCCACACCACCTGCCAGGCCCTCGGGGTGTG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGGCTTCTTTTCAGCCTaGCAGCTGGCGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNGFFSA*QLARAR
Trigger: CCTGGCCCTCGCCAGCTGCCAGGCTGAAAAGAAGCC...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGCAACCTCTGCCTCCTaGGCTGCAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSATSAS*AAVILL
Trigger: CAGGAGAATCACTGCAGCCCAGGAGGCAGAGGTTGC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAAGACTGTGGTTGAGCTaGGACAGACAAGGCCGACAC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSRLWLS*DRQGRH
Trigger: GTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCT...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCACTAACCTCATCCCAGTaGGTAGAGACTGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSLTSSQ*VETGRG
Trigger: TCCCCTCCCAGTCTCTACTCACTGGGATGAGGTTAG...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAACTTCCTGTAGGCAATaGCCTAGGGCTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSTSCRQ*PRALHC
Trigger: GCAGTGCAGAGCCCTAGGGCATTGCCTACAGGAAGT...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGAGGAATGGGGAATTaGTGCTCGGAGAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDRGMGN*CSERSC
Trigger: ACAGGATCTCTCCGAGCAGCAATTCCCCATTCCTCT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTCGAGGAAGAAAGCTTaGCCGGTCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRSRKKA*PVAIPS
Trigger: TGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCACGTCTGGCCATACTaGAGCACTTTAAAGGACGGT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDHVWPY*STLKDG
Trigger: ACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGTTCTATGGACACATaGTTTGCATTAGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGSMDT*FALVRR
Trigger: TCTTCTGACTAATGCAAACCATGTGTCCATAGAACC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCCTGGAAAAATCTTCTaGTTCTATGGACACATGGTT +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGPGKIF*FYGHMV
Trigger: AACCATGTGTCCATAGAACCAGAAGATTTTTCCAGG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393822.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATCAGAACTCAGGGCCCTaGGCACAGGCCAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNQNSGP*AQAKDE
Trigger: CTCATCCTTGGCCTGTGCCCAGGGCCCTGAGTTCTG...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGTCCAGCAGAGGGTCTaGCAGAGGGTCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDVQQRV*QRVPQR
Trigger: CCTCTGCGGGACCCTCTGCCAGACCCTCTGCTGGAC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTTGGGAATCATGGCTTaGATCCGCTTGATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLGIMA*IRLIRA
Trigger: GGCTCTGATCAAGCGGATCCAAGCCATGATTCCCAA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCGCTCAGCCAGGCACTaGCAGATGCCGCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTRSARH*QMPPAT
Trigger: GGTGGCGGGCGGCATCTGCCAGTGCCTGGCTGAGCG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTCCTGTCGGCGACCTTaGGCCAGCGCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNSCRRP*ASAVIH
Trigger: ATGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGAGCCAACACAGGCCTaGAGCATTGCCTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSEPTQA*SIACGM
Trigger: CATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAGGGCTGGGGGCCCGTaGTCCACCAGTGGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDRAGGP*STSGSD
Trigger: GTCACTTCCACTGGTGGACCACGGGCCCCCAGCCCT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGTTTGTGGGCAGGGGGTaGATCTTACAAAGCACATTC +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLFVGRG*ILQSTF
Trigger: GAATGTGCTTTGTAAGATCCACCCCCTGCCCACAAA...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGCTCTCCTGGGCTAGGTaGGATTGTGGGTGTCACATG +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRLSWAR*DCGCHM
Trigger: CATGTGACACCCACAATCCCACCTAGCCCAGGAGAG...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGGGCGGTGTGGGAGCTaGGGCTTCTTTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDGRCGS*GFFSAW
Trigger: CCAGGCTGAAAAGAAGCCTCAGCTCCCACACCGCCC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTTTTTGGTGTCCTCATaGCCTAACCTCATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDFLVSS*PNLIPV
Trigger: CACTGGGATGAGGTTAGGTCATGAGGACACCAAAAA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGGAATGGGGAATTGCTaGTCGGAGAGATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRGMGNC*SERSCV
Trigger: CACACAGGATCTCTCCGAGCAGCAATTCCCCATTCC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTGCTGCTCCACAAATTaGTTGCACTTTTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDCCSTN*LHFSLS
Trigger: GGACAGGGAAAAGTGCAAGCAATTTGTGGAGCAGCA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATATGCTGCCCTCGCTGTaGCTCACACCAGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNMLPSL*LTPERM
Trigger: CATCCTCTCTGGTGTGAGGCACAGCGAGGGCAGCAT...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCCAGGCAGCAGTGCCTaGGCCACAGAGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTPGSSA*ATERGQ
Trigger: CTGCCCACGCTCTGTGGCCCAGGCACTGCTGCCTGG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAATGTCCTCACACTCTTaGCATAGGTCATCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSMSSHS*HRSSAP
Trigger: GGGAGCCGATGACCTATGCCAAGAGTGTGAGGACAT...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAAGCACTTGGTTGCACTaGGGCATGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSSTWLH*GMSSFK
Trigger: CTTGAAGCTGCTCATGCCCCAGTGCAACCAAGTGCT...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATCTGGAGCATTGCCTGTaGTATGGCCTGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNLEHCL*YGLLAA
Trigger: AGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAG...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATACCAGGGTCAGCAGCTaGGGCGTGTGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDTRVSS*GVCCST
Trigger: TGTGGAGCAGCACACGCCCCAGCTGCTGACCCTGGT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGGCATCCCAGCCCCTaGGCACCAGGGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGHPSP*APGSAA
Trigger: AGCTGCTGACCCTGGTGCCCAGGGGCTGGGATGCCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCACACCCCGAGGGCCTaGCAGGTGGTGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTHTPRA*QVVWAS
Trigger: GGATGCCCACACCACCTGCCAGGCCCTCGGGGTGTG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGCTTTCAATCAAAAGCTaGAAGTCCACCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQLSIKS*KSTLQK
Trigger: TTTCTGTAAGGTGGACTTCCAGCTTTTGATTGAAAG...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACTGTATTACACAGGAATaGGTCCCTAGCTTGCACAAC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNCITQE*VPSLHN
Trigger: GTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACA...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGGTGCGGGCGTGGGGTaGGTGGGGAGAATATTACAA +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNGAGVG*VGRILQ
Trigger: TTGTAATATTCTCCCCACCCACCCCACGCCCGCACC...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTGCAGTGTCCACCCTTaGCTACGCTGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNCSVHP*LRWGIA
Trigger: AGCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGGTCCAGGCAGCAGTaGCTGGGCCACAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTWSRQQ*LGHRAW
Trigger: CCACGCTCTGTGGCCCAGGCACTGCTGCCTGGACCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATCTGCACTGCAATGCTTaGTCCAGGCTTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNLHCNA*SRLWHQ
Trigger: CTGGTGCCAAAGCCTGGAGCAAGCATTGCAGTGCAG...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCCAGGCACTGGCAGATaGCGCCCGCCACCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTPGTGR*RPPPEV
Trigger: TACCTCTGGTGGCGGGCGGCATCTGCCAGTGCCTGG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTVWPAR*CSRPGW
Trigger: CCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATAC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGCCTGTGGTATGGCCTaGTCGCTGCTGTTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTACGMA*SLLFPA
Trigger: GGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGCTCCACAAATTGCTTaGACTTTTCCCTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRAPQIA*TFPCPA
Trigger: GGCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGCACGTCTGGCCATACTaGAGCACTTTAAAGGACGGT +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRHVWPY*STLKDG
Trigger: ACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTG...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACATCTTGTTAAGGATGTaGACGATGTCCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNILLRM*TMSSHS
Trigger: AGAGTGTGAGGACATCGTCCACATCCTTAACAAGAT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCAGCGCTGTCATCCATaGAGCACCGGAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGQRCHP*STGGRG
Trigger: GCCTCGTCCTCCGGTGCTCCATGGATGACAGCGCTG...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATTATTTTTAGGTTTTTaGTGTCCTCATGACCTAACC +
Preference number: 4 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLFLGF*CPHDLT
Trigger: GGTTAGGTCATGAGGACACCAAAAACCTAAAAATAA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRYDGLA*AQRPDS
Trigger: ACTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTAAAGCACATTCTCAATaGCGGAGAGAATATTACAAA +
Preference number: 4 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGKAHSQ*RREYYK
Trigger: TTTGTAATATTCTCTCCGCCATTGAGAATGTGCTTT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGCCGTAGCTCTCTCCTaGGCTAGGTGGGATTGTGGG +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDAVALS*ARWDCG
Trigger: CCCACAATCCCACCTAGCCCAGGAGAGAGCTACGGC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCTGGCGCTTGAACGGTaGAGGTGTGGAGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGLALER*RCGARG
Trigger: GCCTCTGGCTCCACACCTCCACCGTTCAAGCGCCAG...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGACGGTGTCTTTTTCTaGACAGCTGAGTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDDGVFF*TAEFSS
Trigger: TGATGAGAACTCAGCTGTCCAGAAAAAGACACCGTC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGCACAGGCCAAGGATaGGGTGGTCCAGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGTGQG*GGPGSS
Trigger: ACTGCTGCCTGGACCACCTCATCCTTGGCCTGTGCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTTTGGGCAGGGGGTCTaGCATCCCTGGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTFGQGV*HPWLLL
Trigger: GAGCAGGAGCCAGGGATGTCAGACCCCCTGCCCAAA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCCGCTGACTTCAGGGTaGGGCCACAGCTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTPLTSG*GHSYCS
Trigger: GCTGCAGTAGCTGTGGCCTCACCCTGAAGTCAGCGG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGCTGGGAGCGCTTGTaGGGGAGAGGAGCTATGGAC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGWERL*GRGAMD
Trigger: GTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTTGGGCTCAGAGGCCTaGCAGTGGGTAATTTCCACT +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNLGSEA*QWVIST
Trigger: AGTGGAAATTACCCACTGTCAGGCCTCTGAGCCCAA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGCTCTGGCTCTGGCTaGCGGGATTTGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTCSGSG*RDLHRP
Trigger: GGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGAGCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGGGTGGTCACGGACATaGAGAGGTGGCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDGWSRT*RGGTQS
Trigger: ACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGTCGCCATCCCATCATaGCAGAGCGTGCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDVAIPS*QSVQCP
Trigger: TGGACACTGCACGCTCTGGCATGATGGGATGGCGAC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCTCTGCCTCCTGGGCTaGAGTGATTCTCCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDLCLLG*SDSPAF
Trigger: GAACGCAGGAGAATCACTGCAGCCCAGGAGGCAGAG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCATTGTGGATCTTCAGTTaGTTCAGGCCATCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: IVLHRNGSLACTTPAELSLWIFS*FRPSGC
Trigger: ACACCCAGATGGCCTGAAGCAACTGAAGATCCACAA...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTGGCACCTCTGCAGCCTaGGTACCCTGCTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGGTSAA*VPCLVH
Trigger: ATGCACCAAGCAGGGTACCCAGGCTGCAGAGGTGCC...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393822.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGTCCCGCAGAGGTTTaGGCAGGGGGTCTGACATCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGPAEV*AGGLTS
Trigger: GGATGTCAGACCCCCTGCCCAAACCTCTGCGGGACC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTTCCTGTCGGCGACCTTaGGCCAGCGCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGSCRRP*ASAVIH
Trigger: ATGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGA...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGTDMQR*HSESRG
Trigger: GCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGT...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCTGCTGTTCCCGGCCTaGGTGGTCACGGACATGCAG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTLLFPA*VVTDMQ
Trigger: CTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCTGGAGCATTGCCTGTaGTATGGCCTGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDLEHCL*YGLLAA
Trigger: AGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTACCAGGGTCAGCAGCTaGGGCGTGTGCTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTTRVSS*GVCCST
Trigger: TGTGGAGCAGCACACGCCCCAGCTGCTGACCCTGGT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDGLWIH*RGLDMV
Trigger: GACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCCAGTGAGTAGAGACTaGGAGGGGAGAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDPVSRD*EGRAAA
Trigger: AGCTGCTGCTCTCCCCTCCCAGTCTCTACTCACTGG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTGCCGTAGCTCTCTCCTaGGCTAGGTGGGATTGTGGG +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGAVALS*ARWDCG
Trigger: CCCACAATCCCACCTAGCCCAGGAGAGAGCTACGGC...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGGCTTGGATCCGCTTaGTCAGAGCCCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTWLGSA*SEPCRA
Trigger: GGCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAGACTGTGGTTGAGCTaGGACAGACAAGGCCGACAC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDRLWLS*DRQGRH
Trigger: GTGTCGGCCTTGTCTGTCTCAGCTCAACCACAGTCT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATGTGTCAGACTGTGGTTaGGCTGAGACAGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDVSDCG*AETDKA
Trigger: GGCCTTGTCTGTCTCAGCTCAACCACAGTCTGACAC...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATTGCAGTGTCCACCCTTaGCTACGCTGGGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDCSVHP*LRWGIA
Trigger: AGCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCA...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCTGGTCTCGAACTCCTaGCCTCAAGGATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGLVSNS*PQGSSC
Trigger: GCAGGAGGATCCTTGAGGTCAGGAGTTCGAGACCAG...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCAGCCATGGCACCTCTaGAGCCTGGGTACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTQPWHL*SLGTLL
Trigger: AAGCAGGGTACCCAGGCTGCAGAGGTGCCATGGCTG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTACCAGTGGAAGTGACTaGCGAGGAAGGGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTTSGSD*RGRAVR
Trigger: CCTCACCGCCCTTCCTCGGCAGTCACTTCCACTGGT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTATGCTGCCCTCGCTGTaGCTCACACCAGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGMLPSL*LTPERM
Trigger: CATCCTCTCTGGTGTGAGGCACAGCGAGGGCAGCAT...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCAGAGCTCCTCCAGATaGTGCCCTCGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTQSSSR*CPRCAS
Trigger: TGAGGCACAGCGAGGGCAGCATCTGGAGGAGCTCTG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATTCGAGGAAGAAAGCTTaGCCGGTCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDSRKKA*PVAIPS
Trigger: TGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGA...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGATTGTGGGTGTCACATaGTTCCCTGTGAAGAGACTA +
Preference number: 4 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRIVGVT*FPVKRL
Trigger: TAGTCTCTTCACAGGGAAGCATGTGACACCCACAAT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCCTGGAAAAATCTTCTaGTTCTATGGACACATGGTT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDPGKIF*FYGHMV
Trigger: AACCATGTGTCCATAGAACCAGAAGATTTTTCCAGG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409383.6
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGTGTGACTCAGCCATaGCACCTCTGCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGVTQP*HLCSLG
Trigger: ACCCAGGCTGCAGAGGTGCCATGGCTGAGTCACACC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAGGCCAAGGATGAGGTaGTCCAGGCAGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTRPRMR*SRQQCL
Trigger: CAGGCACTGCTGCCTGGACCACCTCATCCTTGGCCT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTCCTGTCGGCGACCTTaGGCCAGCGCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTSCRRP*ASAVIH
Trigger: ATGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGTTCCCGGCCTGGGTaGTCACGGACATGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTCSRPG*SRTCRG
Trigger: ACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACCTTTCAATCAAAAGCTaGAAGTCCACCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNLSIKS*KSTLQK
Trigger: TTTCTGTAAGGTGGACTTCCAGCTTTTGATTGAAAG...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTATGGACACATGGTTTaGATTAGTCAGAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDYGHMV*ISQKSI
Trigger: AATGCTCTTCTGACTAATGCAAACCATGTGTCCATA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409383.6
CDS-3UTR GCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCCTAGGGCTCTGCACTaGAATGCTTGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGPRALH*NACSRL
Trigger: AAGCCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGG...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTAGCTGGGGCGTGTGCTaGTCCACAAATTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGSWGVC*STNCLH
Trigger: GTGCAAGCAATTTGTGGAGCAGCACACGCCCCAGCT...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAATGGGTCCCTAGCTTaGACAACCCCAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDNGSLA*TTPAEL
Trigger: AAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCTCTGCCTCCTGGGCTaGAGTGATTCTCCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTLCLLG*SDSPAF
Trigger: GAACGCAGGAGAATCACTGCAGCCCAGGAGGCAGAG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAGCACTTGGTTGCACTaGGGCATGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDSTWLH*GMSSFK
Trigger: CTTGAAGCTGCTCATGCCCCAGTGCAACCAAGTGCT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCAGCTAGCGCACCCTTaGGAATCATGGCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGQLAHP*ESWLGS
Trigger: GGATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTG...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTACACTGGAGAGGGCTaGACATGGTCCCACACACCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTYTGEG*TWSHTP
Trigger: GGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGLWIH*RGLDMV
Trigger: GACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGTGAGGAGGGCGGTGTaGGAGCTGAGGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTVRRAV*ELRLLF
Trigger: GAAAAGAAGCCTCAGCTCCCACACCGCCCTCCTCAC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATTCACACCAGAGAGGATaGAAGTGGGCTCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDSHQRG*KWALVS
Trigger: TGACACCAGAGCCCACTTCCATCCTCTCTGGTGTGA...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCCAGTGAGTAGAGACTaGGAGGGGAGAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTPVSRD*EGRAAA
Trigger: AGCTGCTGCTCTCCCCTCCCAGTCTCTACTCACTGG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACTTATTTTTAGGTTTTTaGTGTCCTCATGACCTAACC +
Preference number: 4 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNLFLGF*CPHDLT
Trigger: GGTTAGGTCATGAGGACACCAAAAACCTAAAAATAA...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTCGGGCGTGGGGTGGGTaGGGAGAATATTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGRAWGG*GEYYKA
Trigger: TGCTTTGTAATATTCTCCCCACCCACCCCACGCCCG...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGAAAGCACATTCTCAATaGCGGAGAGAATATTACAAA +
Preference number: 4 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLKAHSQ*RREYYK
Trigger: TTTGTAATATTCTCTCCGCCATTGAGAATGTGCTTT...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCGGCAGCCATTCTCTTaGGCCAGCGCTGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTRQPFS*ASAVIH
Trigger: ATGGATGACAGCGCTGGCCCAAGAGAATGGCTGCCG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428225.5
CDS-3UTR TCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTTCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGSGSSR*PGGSSR
Trigger: ACGACTACTTCCCCCTGGTCATCGACTACTTCCAGA...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCCTAGGGCTCTGCACTaGAATGCTTGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTPRALH*NACSRL
Trigger: AAGCCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAGCTGGGGCGTGTGCTaGTCCACAAATTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTSWGVC*STNCLH
Trigger: GTGCAAGCAATTTGTGGAGCAGCACACGCCCCAGCT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTAATGGGTCCCTAGCTTaGACAACCCCAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGNGSLA*TTPAEL
Trigger: AAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATT...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGAGCTATGGACGTCTaGTTCTCTGCCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGAMDV*FSAKGE
Trigger: CTCTCCCTTGGCAGAGAAGCAGACGTCCATAGCTCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATATTGTGGGTGTCACATaGTTCCCTGTGAAGAGACTA +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNIVGVT*FPVKRL
Trigger: TAGTCTCTTCACAGGGAAGCATGTGACACCCACAAT...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGCCCAAGAGCAGGCTaGATAGACAGCTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGPRAG*IDSSFW
Trigger: CCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGAGCCAACACAGGCCTaGAGCATTGCCTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTEPTQA*SIACGM
Trigger: CATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTGTATTACACAGGAATaGGTCCCTAGCTTGCACAAC +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNCITQE*VPSLHN
Trigger: GTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTTATTTTTAGGTTTTTaGTGTCCTCATGACCTAACC +
Preference number: 4 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLFLGF*CPHDLT
Trigger: GGTTAGGTCATGAGGACACCAAAAACCTAAAAATAA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR TCA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATTTTTTGGTGTCCTCATaGCCTAACCTCATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VECHQLRQELAIFTSFVDFLVSS*PNLIPV
Trigger: CACTGGGATGAGGTTAGGTCATGAGGACACCAAAAA...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR TCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTTCACATGCTTCCCTGTaGAGAGACTACCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGSHASL*RDYQTG
Trigger: GCCTGTTTGGTAGTCTCTTCACAGGGAAGCATGTGA...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAATGCCCTAGGGCTCTaGACTGCAATGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTNALGL*TAMLAP
Trigger: TGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAGGACGTTGCACTCCTaGTCCAGGAACTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTRTLHS*SRNFLI
Trigger: GATGAGGAAGTTCCTGGAGCAGGAGTGCAACGTCCT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGAATGGGGAATTGCTaGTCGGAGAGATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGMGNC*SERSCV
Trigger: CACACAGGATCTCTCCGAGCAGCAATTCCCCATTCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATATCTTGTTAAGGATGTaGACGATGTCCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNILLRM*TMSSHS
Trigger: AGAGTGTGAGGACATCGTCCACATCCTTAACAAGAT...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTTCGTGTCCTGGAAAATaGCCTCCTTGGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGSCPGK*PPWPSC
Trigger: ACAAGATGGCCAAGGAGGCCATTTTCCAGGACACGA...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTTCCTCATCGTGTCCTaGAAAATGGCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTFLIVS*KMASLA
Trigger: GGCCAAGGAGGCCATTTTCCAGGACACGATGAGGAA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCAGAGAGGATGGAAGTaGGCTCTGGTGTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTQRGWK*ALVSDC
Trigger: ACAGTCTGACACCAGAGCCCACTTCCATCCTCTCTG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCCAGGTGCATACAGATaGCGTTTGAGTCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTPGAYR*RLSQSG
Trigger: ACCAGACTGACTCAAACGGCATCTGTATGCACCTGG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAGAGGAATGGGGAATTaGTGCTCGGAGAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTRGMGN*CSERSC
Trigger: ACAGGATCTCTCCGAGCAGCAATTCCCCATTCCTCT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGCTCCACAAATTGCTTaGACTTTTCCCTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTAPQIA*TFPCPA
Trigger: GGCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCACGTCTGGCCATACTaGAGCACTTTAAAGGACGGT +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTHVWPY*STLKDG
Trigger: ACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTTGGGAATCATGGCTTaGATCCGCTTGATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTLGIMA*IRLIRA
Trigger: GGCTCTGATCAAGCGGATCCAAGCCATGATTCCCAA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTTTTTGGTGTCCTCATaGCCTAACCTCATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTFLVSS*PNLIPV
Trigger: CACTGGGATGAGGTTAGGTCATGAGGACACCAAAAA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR TCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCTTTTTCTGGACAGCTaGGTTCTCATCAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTLFLDS*VLIKGR
Trigger: CCGACCTTTGATGAGAACTCAGCTGTCCAGAAAAAG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGCTGCTCCACAAATTaGTTGCACTTTTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTCCSTN*LHFSLS
Trigger: GGACAGGGAAAAGTGCAAGCAATTTGTGGAGCAGCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CCA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGACGGTGTCTTTTTCTaGACAGCTGAGTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTDGVFF*TAEFSS
Trigger: TGATGAGAACTCAGCTGTCCAGAAAAAGACACCGTC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR GCA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTTATGGACACATGGTTTaGATTAGTCAGAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGYGHMV*ISQKSI
Trigger: AATGCTCTTCTGACTAATGCAAACCATGTGTCCATA...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393822.7
CDS CCA 90 bp GCGCTGTCATCCATGGAGCACCGGAGGACGAGGCGGCAGACCAGCTaGGGCAGCATGCGGCCCAGCAGCGTGTCGAGCAGGATGACGGAG +
Preference number: 5 (lower is better)
Translates to: ALSSMEHRRTRRQTS*GSMRPSSVSSRMTE
Trigger: CTCCGTCATCCTGCTCGACACGCTGCTGGGCCGCATGCTGCCCCAGCTGGTCTGCCGCCTCGTCCTCCGGTGCTCCATGGATGACAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS CCA 90 bp CACTGGCAGATGCCGCCCGCCACCAGAGGTACCACGCGGCACACCTaGGCCACTGCCACAGCTAGCGCACCCTTGGGAATCATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: HWQMPPATRGTTRHT*ATATASAPLGIMAW
Trigger: CCAAGCCATGATTCCCAAGGGTGCGCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGTACCTCTGGTGGCGGGCGGCATCTGCCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS TCA 90 bp GCCACAGAGCGTGGGCAGCAGCAGCAGCAGCCACTGCAGCAGGTGTaGCTCAGCCATGGCACCTCTGCAGCCTGGGTACCCTGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: ATERGQQQQQPLQQV*LSHGTSAAWVPCLV
Trigger: CACCAAGCAGGGTACCCAGGCTGCAGAGGTGCCATGGCTGAGTCACACCTGCTGCAGTGGCTGCTGCTGCTGCTGCCCACGCTCTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000409383.6
CDS CCA 90 bp CCAAGGATGAGGTGGTCCAGGCAGCAGTGCCTGGGCCACAGAGCGTaGGCAGCAGCAGCAGCAGCCACTGCAGCAGGTGTGACTCAGCCA +
Preference number: 5 (lower is better)
Translates to: PRMRWSRQQCLGHRA*AAAAAATAAGVTQP
Trigger: TGGCTGAGTCACACCTGCTGCAGTGGCTGCTGCTGCTGCTGCCCACGCTCTGTGGCCCAGGCACTGCTGCCTGGACCACCTCATCCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000473692.1
ENST00000519937.7
CDS CCA 90 bp TGCTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGCAGCCATTCTCTTGGGCCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: CSLLFPAWVVTDMQR*HSESRGSHSLGPAL
Trigger: CAGCGCTGGCCCAAGAGAATGGCTGCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428225.5
CDS CCA 90 bp TGCTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGCAGCCATTCTCCTGTCGGCGACCCT +
Preference number: 5 (lower is better)
Translates to: CSLLFPAWVVTDMQR*HSESRGSHSPVGDP
Trigger: AGGGTCGCCGACAGGAGAATGGCTGCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491167.1
CDS-3UTR CAA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGGGTCCCGCAGAGGTTaGGGCAGGGGGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLGSRRG*GRGSDI
Trigger: GATGTCAGACCCCCTGCCCAAACCTCTGCGGGACCC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS GCA 90 bp AGCCAGGAGCCAACACAGGCCTGGAGCATTGCCTGTGGTATGGCCTaGTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SQEPTQAWSIACGMA*SLLFPAWVVTDMQR
Trigger: CCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000491167.1
ENST00000494165.1
ENST00000519937.7
CDS CCA 90 bp TGCTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGCAGCCATTCTCCTGTCGGCGACCTT +
Preference number: 5 (lower is better)
Translates to: CSLLFPAWVVTDMQR*HSESRGSHSPVGDL
Trigger: AAGGTCGCCGACAGGAGAATGGCTGCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000519937.7
CDS CCA 90 bp TGTCCAGCCAGGAGCCAACACAGGCCTGGAGCATTGCCTGTGGTATaGCCTGCTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATGC +
Preference number: 5 (lower is better)
Translates to: CPARSQHRPGALPVV*PARCCSRPGWSRTC
Trigger: GCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTCCTGGCTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000491167.1
ENST00000494165.1
ENST00000519937.7
CDS GCA 90 bp AGCCAACACAGGCCTGGAGCATTGCCTGTGGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGGTGGCACT +
Preference number: 5 (lower is better)
Translates to: SQHRPGALPVVWPAR*CSRPGWSRTCRGGT
Trigger: AGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000491167.1
ENST00000494165.1
ENST00000519937.7
CDS CCA 90 bp ACTGGAGCCAGCTTTTCCCTGTCCAGCCAGGAGCCAACACAGGCCTaGAGCATTGCCTGTGGTATGGCCTGCTCGCTGCTGTTCCCGGCC +
Preference number: 5 (lower is better)
Translates to: TGASFSLSSQEPTQA*SIACGMACSLLFPA
Trigger: GGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTCCTGGCTGGACAGGGAAAAGCTGGCTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491167.1
CDS-3UTR CAA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGTGCTTGCTCCAGGCTTaGGCACCAGAACTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLCLLQA*APELRA
Trigger: GGCCCTGAGTTCTGGTGCCAAAGCCTGGAGCAAGCA...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GGGCAGTGCTCGGGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCCACAGGCCTGGAGCATaGCCTGTGGTATGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GQCSGSGKGVFLMASQKPHRPGA*PVVWPA
Trigger: AGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTG...GGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCCCGAGCACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS GCA 90 bp TTGGGCAGGGGGTCTGACATCCCTGGCTCCTGCTCTGGCTCTGGCTaGCGGGATTTGCACAGGCCCAGGTGCATACAGATGCCGTTTGAG +
Preference number: 5 (lower is better)
Translates to: LGRGSDIPGSCSGSG*RDLHRPRCIQMPFE
Trigger: CTCAAACGGCATCTGTATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGAGCAGGAGCCAGGGATGTCAGACCCCCTGCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS CCA 90 bp GCTGGACAGCTGAGTTCTCATCAAAGGTCGGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTCCCACACACCCCGAGGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGQLSSHQRSGLWIH*RGLDMVPHTPRAWQ
Trigger: CTGCCAGGCCCTCGGGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS CCA 90 bp CCTGGACAGCTGAGTTCTCATCAAAGGTCGGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTCCCACACACCCCGAGGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PGQLSSHQRSGLWIH*RGLDMVPHTPRAWQ
Trigger: CTGCCAGGCCCTCGGGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGGGTCCCGCAGAGGTTaGGGCAGGGGGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQGSRRG*GRGSDI
Trigger: GATGTCAGACCCCCTGCCCAAACCTCTGCGGGACCC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTCCTGTCGGCGACCTaGGGCCAGCGCTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLLSAT*GQRCHP
Trigger: TGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000519937.7
CDS CCA 90 bp TCTGGACAGCTGAGTTCTCATCAAAGGTCGGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTCCCACACACCCCGAGGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGQLSSHQRSGLWIH*RGLDMVPHTPRAWQ
Trigger: CTGCCAGGCCCTCGGGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGTAGTCGTCAAGCACTaGGTTGCACTGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLVVVKH*VALGHE
Trigger: CTCATGCCCCAGTGCAACCAAGTGCTTGACGACTAC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGAGAGGAATGGGGAATaGCTGCTCGGAGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLERNGE*LLGEIL
Trigger: CAGGATCTCTCCGAGCAGCAATTCCCCATTCCTCTC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS TCA 90 bp CAGAGTCTCGCGGCAGCCATTCTCCTGTCGGCGACCCTGGAGATGTaGGCATTAGGGGGAAAGCAGGCAAGGCCACCCTACAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: QSLAAAILLSATLEM*ALGGKQARPPYRGV
Trigger: AACACCTCTGTAGGGTGGCCTTGCCTGCTTTCCCCCTAATGCTCACATCTCCAGGGTCGCCGACAGGAGAATGGCTGCCGCGAGACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491167.1
CDS CCA 90 bp AATTGCTTGCACTTTTCCCTGTCCAGCCAGGAGCCAACACAGGCCTaGAGCATTGCCTGTGGTATGGCCTGCTCGCTGCTGTTCCCGGCC +
Preference number: 5 (lower is better)
Translates to: NCLHFSLSSQEPTQA*SIACGMACSLLFPA
Trigger: GGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTGGCTCCTGGCTGGACAGGGAAAAGTGCAAGCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000494165.1
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATCTGGCTGCCGGGATTaGCACAGGCCCAGGTGCATA +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQSGCRD*HRPRCI
Trigger: TATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAGA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACACAGGCCTGGAGCATaGCCTGTGGTATGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQHRPGA*PVVWPA
Trigger: AGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTCTCGAGGAAGAAAGCTaGCCCGGTCGCCATCCCATC +
Preference number: 5 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGLEEES*PGRHPI
Trigger: GATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAG...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS TCA 90 bp CTGCCACAGCTAGCGCACCCTTGGGAATCATGGCTTGGATCCGCTTaGTCAGAGCCCTGCAGAGCCAGCAATAGGGGAGAGGAATGGGGA +
Preference number: 5 (lower is better)
Translates to: LPQLAHPWESWLGSA*SEPCRASNRGEEWG
Trigger: TCCCCATTCCTCTCCCCTATTGCTGGCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATCGTCAAGCACTTGGTaGCACTGGGGCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQSSSTW*HWGMSS
Trigger: GCTGCTCATGCCCCAGTGCAACCAAGTGCTTGACGA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAATGGCTTGGATCCGCTaGATCAGAGCCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQMAWIR*IRALQS
Trigger: GCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCAT...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTATGGCTTGGATCCGCTaGATCAGAGCCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGMAWIR*IRALQS
Trigger: GCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCAT...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS GCA 90 bp CATAGGTCATCGGCTCCCACATGTCCCCAGACTTCCTGTAGGCAATaGCCTAGGGCTCTGCACTGCAATGCTTGCTCCAGGCTTTGGCAC +
Preference number: 5 (lower is better)
Translates to: HRSSAPTCPQTSCRQ*PRALHCNACSRLWH
Trigger: GTGCCAAAGCCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATTGCCTACAGGAAGTCTGGGGACATGTGGGAGCCGATGACCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS-3UTR CAA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGTCTGGCTGCCGGGATTaGCACAGGCCCAGGTGCATA +
Preference number: 5 (lower is better)
Translates to: GGENITKYLLKGAGVRAWSGCRD*HRPRCI
Trigger: TATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAGA...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCACAGGCCTGGAGCATaGCCTGTGGTATGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GGENITKYLLKGAGVRAWHRPGA*PVVWPA
Trigger: AGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GGGTCCGGAAAGGGTGTTTTCCTGATGGCCAGCCAGAAGCCCTCAGGAGCCTCCTGCTCCACAAATTGCTaGCACTTTTCCCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSGKGVFLMASQKPSGASCSTNC*HFSLSS
Trigger: GCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGCA...GGAGGCTCCTGAGGGCTTCTGGCTGGCCATCAGGAAAACACCCTTTCCGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494165.1
CDS-3UTR CAA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGTGTAAAATCCAATCTTaGAGTGCATGGGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLCKIQS*SAWGWV
Trigger: CACCCACCCCCATGCACTCAAAGATTGGATTTTACA...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGCTCGAGGAAGAAAGCTaGCCCGGTCGCCATCCCATC +
Preference number: 5 (lower is better)
Translates to: GGENITKYLLKGAGVRAWLEEES*PGRHPI
Trigger: GATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAG...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGCCAGGAGCCAATGAATaGTGTGTCTCATCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQPGANE*CVSSPG
Trigger: GCCTGGGGATGAGACACACAATTCATTGGCTCCTGG...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS TCA 90 bp GAGGTGAGCTTGCAGCCCTCACAGTCTGGTTCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGTCAAGCACTTGGTTGCACTGGGGCA +
Preference number: 5 (lower is better)
Translates to: EVSLQPSQSGSGSSR*PGGSSRQALGCTGA
Trigger: TGCCCCAGTGCAACCAAGTGCTTGACGACTACTTCCCCCTGGTCATCGACTACTTCCAGAACCAGACTGTGAGGGCTGCAAGCTCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473692.1
CDS-3UTR CAA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGTTCAAGGGGAGGACGTaGCACTCCTGCTCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GGENITKYLLKGAGVRAWFKGRT*HSCSRN
Trigger: GTTCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAA...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp ATCTCGAGGAAGAAAGCTTGCCCGGTCGCCATCCCATCATGCCAGAGCGTGCAGCTTGGGAATCATGGCTaGGATCCGCTTGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: ISRKKACPVAIPSCQSVQLGNHG*DPLDQS
Trigger: GCTCTGATCAAGCGGATCCAAGCCATGATTCCCAAG...CTGCACGCTCTGGCATGATGGGATGGCGACCGGGCAAGCTTTCTTCCTCGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAACTTGGGAATCATGGCTaGGATCCGCTTGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQLGNHG*DPLDQS
Trigger: GCTCTGATCAAGCGGATCCAAGCCATGATTCCCAAG...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGCACAGGCCTGGAGCATaGCCTGTGGTATGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLHRPGA*PVVWPA
Trigger: AGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTG...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp CCAGGGAGCAGGGGAAGAGCCTGGTCACCATGGTCCCAGAGCCCGTCTCACTTGGCATTGGTGCAGACATaGTATTACACAGGAATGGGT +
Preference number: 5 (lower is better)
Translates to: PGSRGRAWSPWSQSPSHLALVQT*YYTGMG
Trigger: ACCCATTCCTGTGTAATACAATGTCTGCACCAATGC...CAAGTGAGACGGGCTCTGGGACCATGGTGACCAGGCTCTTCCCCTGCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTGCTTGCTCCAGGCTTaGGCACCAGAACTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDCLLQA*APELRA
Trigger: GGCCCTGAGTTCTGGTGCCAAAGCCTGGAGCAAGCA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTGCATACAGATGCCGTTaGAGTCAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGAYRCR*SQSGSG
Trigger: TCCAGAACCAGACTGACTCAAACGGCATCTGTATGC...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGCATACAGATGCCGTTaGAGTCAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQAYRCR*SQSGSG
Trigger: TCCAGAACCAGACTGACTCAAACGGCATCTGTATGC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCACAGGCCTGGAGCATaGCCTGTGGTATGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDHRPGA*PVVWPA
Trigger: AGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAAGTTAGGAGCAATTTTTaGTGGGCAGGGGGTGGATCT +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQVRSNF*WAGGGS
Trigger: AGATCCACCCCCTGCCCACAAAAAATTGCTCCTAAC...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp AGGCTGGGAGCGCTTGTGAGGGAGAGGAGCTATGGACGTCTGCTTCTCTGCCAATGGAAAATGGCCTCCTaGGCCATCTTGTTAAGGATG +
Preference number: 5 (lower is better)
Translates to: RLGALVRERSYGRLLLCQWKMAS*AILLRM
Trigger: CATCCTTAACAAGATGGCCAAGGAGGCCATTTTCCA...TTGGCAGAGAAGCAGACGTCCATAGCTCCTCTCCCTCACAAGCGCTCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACTTCAAGGGGAGGACGTaGCACTCCTGCTCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDFKGRT*HSCSRN
Trigger: GTTCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAA...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACGTAGTCGTCAAGCACTaGGTTGCACTGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNVVVKH*VALGHE
Trigger: CTCATGCCCCAGTGCAACCAAGTGCTTGACGACTAC...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACATGGCTTGGATCCGCTaGATCAGAGCCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDMAWIR*IRALQS
Trigger: GCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCAT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACACAGCTAGCGCACCCTaGGGAATCATGGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNTASAP*GIMAWI
Trigger: GATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTGT...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCGCTTGAACGGTTGTAAAATCCAATCTTaGAGTGCATGGGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: SPGPRAGCIDSSFWRLNGCKIQS*SAWGWV
Trigger: CACCCACCCCCATGCACTCAAAGATTGGATTTTACA...ACCGTTCAAGCGCCAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GGGCTAGGTGGGATTGTGGGTGTCACATGCTTCCCTGTGAAGAGACTACCAAACCCAGGAGCCAATGAATaGTGTGTCTCATCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GLGGIVGVTCFPVKRLPNPGANE*CVSSPG
Trigger: GCCTGGGGATGAGACACACAATTCATTGGCTCCTGG...GTTTGGTAGTCTCTTCACAGGGAAGCATGTGACACCCACAATCCCACCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS TCA 90 bp GCATACAGATGCCGTTTGAGTCAGTCTGGTTCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGTCAAGCACTTGGTTGCACTGGGGCA +
Preference number: 5 (lower is better)
Translates to: AYRCRLSQSGSGSSR*PGGSSRQALGCTGA
Trigger: TGCCCCAGTGCAACCAAGTGCTTGACGACTACTTCCCCCTGGTCATCGACTACTTCCAGAACCAGACTGACTCAAACGGCATCTGTATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGTAGTCGTCAAGCACTaGGTTGCACTGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDVVVKH*VALGHE
Trigger: CTCATGCCCCAGTGCAACCAAGTGCTTGACGACTAC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGGGTCCCGCAGAGGTTaGGGCAGGGGGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNGSRRG*GRGSDI
Trigger: GATGTCAGACCCCCTGCCCAAACCTCTGCGGGACCC...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACGAGAGGAATGGGGAATaGCTGCTCGGAGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDERNGE*LLGEIL
Trigger: CAGGATCTCTCCGAGCAGCAATTCCCCATTCCTCTC...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACACAGCTAGCGCACCCTaGGGAATCATGGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDTASAP*GIMAWI
Trigger: GATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTGT...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp GGCGGAGAGAATATTACAAAATACCTTCTTAAGGGTGCGGGGGTGCGGGCGTGGTGCTCCACAAATTGCTaGCACTTTTCCCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGENITKYLLKGAGVRAWCSTNC*HFSLSS
Trigger: GCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGCA...CCACGCCCGCACCCCCGCACCCTTAAGAAGGTATTTTGTAATATTCTCTCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS CCA 90 bp ATCGTGTCCTGGAAAATGGCCTCCTTGGCCATCTTGTTAAGGATGTaGACGATGTCCTCACACTCTTGGCATAGGTCATCGGCTCCCACA +
Preference number: 5 (lower is better)
Translates to: IVSWKMASLAILLRM*TMSSHSWHRSSAPT
Trigger: TGTGGGAGCCGATGACCTATGCCAAGAGTGTGAGGACATCGTCCACATCCTTAACAAGATGGCCAAGGAGGCCATTTTCCAGGACACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS-3UTR CAA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGTTCAAGGGGAGGACGTaGCACTCCTGCTCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRFKGRT*HSCSRN
Trigger: GTTCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAA...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp CCACCACGTCTGGCCATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACCTTGGGAATCATGGCTaGGATCCGCTTGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: PPRLAILQHFKGRCLFLDLGNHG*DPLDQS
Trigger: GCTCTGATCAAGCGGATCCAAGCCATGATTCCCAAG...GTCCAGAAAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409383.6
ENST00000428225.5
CDS-3UTR CAA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGGAGAGGAATGGGGAATaGCTGCTCGGAGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRERNGE*LLGEIL
Trigger: CAGGATCTCTCCGAGCAGCAATTCCCCATTCCTCTC...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATCTCCTGTCGGCGACCTaGGGCCAGCGCTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: VECHQLRQELAIFTSFVDLLSAT*GQRCHP
Trigger: TGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGAG...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATTCGTCAAGCACTTGGTaGCACTGGGGCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNSSSTW*HWGMSS
Trigger: GCTGCTCATGCCCCAGTGCAACCAAGTGCTTGACGA...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp ATTGTGTGTCTCATCCCCAGGCCCAAGAGCAGGCTGCATAGACAGCTCTTTCTGGCATTGGTGCAGACATaGTATTACACAGGAATGGGT +
Preference number: 5 (lower is better)
Translates to: IVCLIPRPKSRLHRQLFLALVQT*YYTGMG
Trigger: ACCCATTCCTGTGTAATACAATGTCTGCACCAATGC...CAGAAAGAGCTGTCTATGCAGCCTGCTCTTGGGCCTGGGGATGAGACACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp ACAAGGTCAATTGATCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATAGCTCTTTCTGGCGCTaGAACGGTGGAGGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: TRSIDQLGWGRNKSQWWNSSFWR*NGGGVE
Trigger: CTCCACACCTCCACCGTTCAAGCGCCAGAAAGAGCT...ATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATTGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGGTCCCGCAGAGGTTaGGGCAGGGGGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGSRRG*GRGSDI
Trigger: GATGTCAGACCCCCTGCCCAAACCTCTGCGGGACCC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp ATTGTATTACACAGGAATGGGTCCCTAGCTTGCACAACCCCAGCTGAGCTTTCAGGTGGGGAAGGTGTATaGTCACAAGGTCAATTGATC +
Preference number: 5 (lower is better)
Translates to: IVLHRNGSLACTTPAELSGGEGV*SQGQLI
Trigger: GATCAATTGACCTTGTGACAATACACCTTCCCCACC...TGAAAGCTCAGCTGGGGTTGTGCAAGCTAGGGACCCATTCCTGTGTAATACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATAGCTCTTTCTGGCGCTaGAACGGTGGAGGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VECHQLRQELAIFTSFVDSSFWR*NGGGVE
Trigger: CTCCACACCTCCACCGTTCAAGCGCCAGAAAGAGCT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGCGGCAGCCATTCTCTaGGGCCAGCGCTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTAAAIL*GQRCHP
Trigger: TGGATGACAGCGCTGGCCCAAGAGAATGGCTGCCGC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428225.5
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGCTTGCTCCAGGCTTaGGCACCAGAACTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTCLLQA*APELRA
Trigger: GGCCCTGAGTTCTGGTGCCAAAGCCTGGAGCAAGCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTTCGTCAAGCACTTGGTaGCACTGGGGCATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGSSSTW*HWGMSS
Trigger: GCTGCTCATGCCCCAGTGCAACCAAGTGCTTGACGA...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTCTGGCTGCCGGGATTaGCACAGGCCCAGGTGCATA +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTSGCRD*HRPRCI
Trigger: TATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAGA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp GTGGAATGTCATCAGTTAAGGCAGGAACTGGCTATTTTCACTTCTTTTGTGGATACAGCTAGCGCACCCTaGGGAATCATGGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: VECHQLRQELAIFTSFVDTASAP*GIMAWI
Trigger: GATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTGT...ATCCACAAAAGAAGTGAAAATAGCCAGTTCCTGCCTTAACTGATGACATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTTCAAGGGGAGGACGTaGCACTCCTGCTCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTFKGRT*HSCSRN
Trigger: GTTCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGTGCAGTGTCCACCCTaGACTACGCTGGGGAATTGC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTVQCPP*TTLGNC
Trigger: GCAATTCCCCAGCGTAGTCAAGGGTGGACACTGCAC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGTAGTCGTCAAGCACTaGGTTGCACTGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTVVVKH*VALGHE
Trigger: CTCATGCCCCAGTGCAACCAAGTGCTTGACGACTAC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTACAGCTAGCGCACCCTaGGGAATCATGGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTTASAP*GIMAWI
Trigger: GATCCAAGCCATGATTCCCAAGGGTGCGCTAGCTGT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp GAGAATAGGACTTTATTAGCATTGGTGCAGACATTGTATTACACAGGAATGGGTGCATACAGATGCCGTTaGAGTCAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: ENRTLLALVQTLYYTGMGAYRCR*SQSGSG
Trigger: TCCAGAACCAGACTGACTCAAACGGCATCTGTATGC...ACCCATTCCTGTGTAATACAATGTCTGCACCAATGCTAATAAAGTCCTATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTCTTGGGAATCATGGCTaGGATCCGCTTGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTLGNHG*DPLDQS
Trigger: GCTCTGATCAAGCGGATCCAAGCCATGATTCCCAAG...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp GGTGGTGGGATTATCATTAGTTCTTGTAGGTTTGGGATAGGCGGTGGAGTTAGGAGGACTTTATTAGCATaGGTGCAGACATTGTATTAC +
Preference number: 5 (lower is better)
Translates to: GGGIIISSCRFGIGGGVRRTLLA*VQTLYY
Trigger: GTAATACAATGTCTGCACCAATGCTAATAAAGTCCT...CCTAACTCCACCGCCTATCCCAAACCTACAAGAACTAATGATAATCCCACCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGCATACAGATGCCGTTaGAGTCAGTCTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTAYRCR*SQSGSG
Trigger: TCCAGAACCAGACTGACTCAAACGGCATCTGTATGC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGCTCCACAAATTGCTaGCACTTTTCCCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTCSTNC*HFSLSS
Trigger: GCTGGACAGGGAAAAGTGCAAGCAATTTGTGGAGCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTTGGAAAATGGCCTCCTaGGCCATCTTGTTAAGGATG +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTWKMAS*AILLRM
Trigger: CATCCTTAACAAGATGGCCAAGGAGGCCATTTTCCA...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTGGTGGGGAAGGTGTATaGTCACAAGGTCAATTGATC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTGGEGV*SQGQLI
Trigger: GATCAATTGACCTTGTGACAATACACCTTCCCCACC...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS-3UTR CAA 90 bp TTCAGGGTGAGGCCACAGCTACTGCAGCGCTTTTTATTTATTTATTTATTTACTAGGACTTTATTAGCATaGGTGCAGACATTGTATTAC +
Preference number: 5 (lower is better)
Translates to: FRVRPQLLQRFLFIYLFTRTLLA*VQTLYY
Trigger: GTAATACAATGTCTGCACCAATGCTAATAAAGTCCT...AGTAAATAAATAAATAAATAAAAAGCGCTGCAGTAGCTGTGGCCTCACCCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS CCA 72 bp TCCATGGAGCACCGGAGGACGAGGCGGCAGACCAGCTaGGGCAGCATGCGGCCCAGCAGCGTGTCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SMEHRRTRRQTS*GSMRPSSVSSR
Trigger: CCTGCTCGACACGCTGCTGGGCCGCATGCTGCCCCAGCTGGTCTGCCGCCTCGTCCTCCGGTGCTCCATGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS CCA 72 bp CTCCTGTCGGCGACCTTGGGCCAGCGCTGTCATCCATaGAGCACCGGAGGACGAGGCGGCAGACCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LLSATLGQRCHP*STGGRGGRPAG
Trigger: CCCAGCTGGTCTGCCGCCTCGTCCTCCGGTGCTCCATGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000519937.7
CDS CCA 72 bp ATGCCGCCCGCCACCAGAGGTACCACGCGGCACACCTaGGCCACTGCCACAGCTAGCGCACCCTTGGGAATC +
Preference number: 6 (lower is better)
Translates to: MPPATRGTTRHT*ATATASAPLGI
Trigger: GATTCCCAAGGGTGCGCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGTACCTCTGGTGGCGGGCGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS CCA 72 bp GCGGCAGCCATTCTCTTGGGCCAGCGCTGTCATCCATaGAGCACCGGAGGACGAGGCGGCAGACCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: AAAILLGQRCHP*STGGRGGRPAG
Trigger: CCCAGCTGGTCTGCCGCCTCGTCCTCCGGTGCTCCATGGATGACAGCGCTGGCCCAAGAGAATGGCTGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428225.5
CDS GCA 72 bp GCTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGACATaGAGAGGTGGCACTCAGAGTCTCGCGGCAGCCATT +
Preference number: 6 (lower is better)
Translates to: ARCCSRPGWSRT*RGGTQSLAAAI
Trigger: AATGGCTGCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000491167.1
ENST00000494165.1
ENST00000519937.7
CDS GCA 72 bp CCAACACAGGCCTGGAGCATTGCCTGTGGTATGGCCTaGTCGCTGCTGTTCCCGGCCTGGGTGGTCACGGAC +
Preference number: 6 (lower is better)
Translates to: PTQAWSIACGMA*SLLFPAWVVTD
Trigger: GTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000491167.1
ENST00000494165.1
ENST00000519937.7
CDS GCA 72 bp AGGCCTGGAGCATTGCCTGTGGTATGGCCTGCTCGCTaGTGTTCCCGGCCTGGGTGGTCACGGACATGCAGA +
Preference number: 6 (lower is better)
Translates to: RPGALPVVWPAR*CSRPGWSRTCR
Trigger: TCTGCATGTCCGTGACCACCCAGGCCGGGAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000491167.1
ENST00000494165.1
ENST00000519937.7
CDS CCA 72 bp CTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGCAGCCATTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: LFPAWVVTDMQR*HSESRGSHSPV
Trigger: GACAGGAGAATGGCTGCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000491167.1
ENST00000519937.7
CDS CCA 72 bp ATCAAAGGTCGGGGCTGTGGATACACTGGAGAGGGCTaGACATGGTCCCACACACCCCGAGGGCCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: IKGRGCGYTGEG*TWSHTPRGPGR
Trigger: CCTGCCAGGCCCTCGGGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000494165.1
ENST00000519937.7
CDS CCA 72 bp CTGTTCCCGGCCTGGGTGGTCACGGACATGCAGAGGTaGCACTCAGAGTCTCGCGGCAGCCATTCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: LFPAWVVTDMQR*HSESRGSHSLG
Trigger: CCCAAGAGAATGGCTGCCGCGAGACTCTGAGTGCCACCTCTGCATGTCCGTGACCACCCAGGCCGGGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428225.5
CDS TCA 72 bp GCGGCAGCCATTCTCCTGTCGGCGACCCTGGAGATGTaGGCATTAGGGGGAAAGCAGGCAAGGCCACCCTAC +
Preference number: 6 (lower is better)
Translates to: AAAILLSATLEM*ALGGKQARPPY
Trigger: GTAGGGTGGCCTTGCCTGCTTTCCCCCTAATGCTCACATCTCCAGGGTCGCCGACAGGAGAATGGCTGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491167.1
CDS GCA 72 bp TGTAGGCAATGCCCTAGGGCTCTGCACTGCAATGCTTaGTCCAGGCTTTGGCACCAGAACTCAGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: CRQCPRALHCNA*SRLWHQNSGPW
Trigger: CCAGGGCCCTGAGTTCTGGTGCCAAAGCCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATTGCCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS GCA 72 bp TCGGCTCCCACATGTCCCCAGACTTCCTGTAGGCAATaGCCTAGGGCTCTGCACTGCAATGCTTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SAPTCPQTSCRQ*PRALHCNACSR
Trigger: CCTGGAGCAAGCATTGCAGTGCAGAGCCCTAGGGCATTGCCTACAGGAAGTCTGGGGACATGTGGGAGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS CCA 72 bp CTGAGTTCTCATCAAAGGTCGGGGCTGTGGATACACTaGAGAGGGCTGGACATGGTCCCACACACCCCGAGG +
Preference number: 6 (lower is better)
Translates to: LSSHQRSGLWIH*RGLDMVPHTPR
Trigger: CCTCGGGGTGTGTGGGACCATGTCCAGCCCTCTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000494165.1
ENST00000519937.7
CDS GCA 72 bp TCTGGCTCTGGCTGCCGGGATTTGCACAGGCCCAGGTaGATACAGATGCCGTTTGAGTCAGTCTGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SGSGCRDLHRPR*IQMPFESVWFW
Trigger: CCAGAACCAGACTGACTCAAACGGCATCTGTATGCACCTGGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS CAA 72 bp TTGCACTGGGGCATGAGCAGCTTCAAGGGGAGGACGTaGCACTCCTGCTCCAGGAACTTCCTCATCGTGTCC +
Preference number: 6 (lower is better)
Translates to: LHWGMSSFKGRT*HSCSRNFLIVS
Trigger: GGACACGATGAGGAAGTTCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAAGCTGCTCATGCCCCAGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS TCA 72 bp GGAAGTAGTCGTCAAGCACTTGGTTGCACTGGGGCATaGGCAGCTTCAAGGGGAGGACGTTGCACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GSSRQALGCTGA*AASRGGRCTPA
Trigger: AGCAGGAGTGCAACGTCCTCCCCTTGAAGCTGCTCATGCCCCAGTGCAACCAAGTGCTTGACGACTACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS GCA 72 bp GGCATGAGCAGCTTCAAGGGGAGGACGTTGCACTCCTaGTCCAGGAACTTCCTCATCGTGTCCTGGAAAATG +
Preference number: 6 (lower is better)
Translates to: GMSSFKGRTLHS*SRNFLIVSWKM
Trigger: CATTTTCCAGGACACGATGAGGAAGTTCCTGGAGCAGGAGTGCAACGTCCTCCCCTTGAAGCTGCTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7
CDS TCA 72 bp TTGCAGCCCTCACAGTCTGGTTCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGTCAAGCACTTGGTTGC +
Preference number: 6 (lower is better)
Translates to: LQPSQSGSGSSR*PGGSSRQALGC
Trigger: GCAACCAAGTGCTTGACGACTACTTCCCCCTGGTCATCGACTACTTCCAGAACCAGACTGTGAGGGCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473692.1
CDS TCA 72 bp TGCCGTTTGAGTCAGTCTGGTTCTGGAAGTAGTCGATaGCCAGGGGGAAGTAGTCGTCAAGCACTTGGTTGC +
Preference number: 6 (lower is better)
Translates to: CRLSQSGSGSSR*PGGSSRQALGC
Trigger: GCAACCAAGTGCTTGACGACTACTTCCCCCTGGTCATCGACTACTTCCAGAACCAGACTGACTCAAACGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000519937.7
CDS TCA 72 bp CCGTCTCACTTGGCTTTTCCTTTGCAGCTGGACAGCTaGGTTCTCATCAAAGGTCGGGGCTGTGGATACACT +
Preference number: 6 (lower is better)
Translates to: PSHLAFPLQLDS*VLIKGRGCGYT
Trigger: AGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCCAGCTGCAAAGGAAAAGCCAAGTGAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393822.7
ENST00000519937.7
CDS CAA 90 bp AGGAACTTCCTCATCGTGTCCTGGAAAATGGCCTCCTTGGCCATCTaGTTAAGGATGTGGACGATGTCCTCACACTCTTGGCATAGGTCA +
Preference number: 6 (lower is better)
Translates to: RNFLIVSWKMASLAI*LRMWTMSSHSWHRS
Trigger: TGACCTATGCCAAGAGTGTGAGGACATCGTCCACATCCTTAACAAGATGGCCAAGGAGGCCATTTTCCAGGACACGATGAGGAAGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393822.7
ENST00000409383.6
ENST00000428225.5
ENST00000473692.1
ENST00000519937.7