Pregenerated sensors for SFTPA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185303

Ensembl transcript IDs: ENST00000372325.7, ENST00000492049.1

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	TGGAGGATCCTTCTACCCCAAGGCCTCACTGCTGCCATCTGTAAGTaGAGGAACTGGACCAGATGGGGAATAAGGAGGCCTCCATCTCAT	+
Preference number: 1 (lower is better) Translates to: WRILLPQGLTAAICK*RNWTRWGIRRPPSH Trigger: ATGAGATGGAGGCCTCCTTATTCCCCATCTGGTCCAGTTCCTTCACTTACAGATGGCAGCAGTGAGGCCTTGGGGTAGAAGGATCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372325.7
3UTR-3UTR TCA 90 bp	TTCAGGTCCAGGAAGATGGGTTTGGATCCAGTCTTTGCCATTTGCTCTCTGAAAGGCAGGCACTCTGTGTaGCTTTGGAGGATCCTTCTA	+
Preference number: 2 (lower is better) Translates to: FRSRKMGLDPVFAICSLKGRHSV*LWRILL Trigger: TAGAAGGATCCTCCAAAGTCACACAGAGTGCCTGCC...TTTCAGAGAGCAAATGGCAAAGACTGGATCCAAACCCATCTTCCTGGACCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372325.7
3UTR-3UTR CCA 90 bp	AAGATTTTGTCAAGGTGTGTGGCACATGGTATGTGCTCGGTCAATAGCCTTTGTAGGAACTGGACCAGATaGGGAATAAGGAGGCCTCCA	+
Preference number: 2 (lower is better) Translates to: KILSRCVAHGMCSVNSLCRNWTR*GIRRPP Trigger: TGGAGGCCTCCTTATTCCCCATCTGGTCCAGTTCCT...ACAAAGGCTATTGACCGAGCACATACCATGTGCCACACACCTTGACAAAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
3UTR-3UTR CCA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGAGTGGATCCTGGGGATaGAAACTGAAGGCCAGACAG	+
Preference number: 2 (lower is better) Translates to: CHLLSEITLKTFHSSKLQSGSWG*KLKARQ Trigger: CTGTCTGGCCTTCAGTTTCCATCCCCAGGATCCACT...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372325.7
3UTR CAA 90 bp	GAACTTCAGGTCCAGGAAGATGGGTTTGGATCCAGTCTTTGCCATTaGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTT	+
Preference number: 2 (lower is better) Translates to: ELQVQEDGFGSSLCH*LSEITLKTFHSSKL Trigger: AAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCAAAGACTGGATCCAAACCCATCTTCCTGGACCTGAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR TCA 90 bp	AAGATTTTGTCAAGGTGTGTGGCACATGGTATGTGCTCGGTCAATAGCCTTTGTTGGAGCCCTGCAGACTaGGGGCTCCCCTTGTCTGCA	+
Preference number: 4 (lower is better) Translates to: KILSRCVAHGMCSVNSLCWSPAD*GLPLSA Trigger: TGCAGACAAGGGGAGCCCTCAGTCTGCAGGGCTCCA...ACAAAGGCTATTGACCGAGCACATACCATGTGCCACACACCTTGACAAAATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CCA 90 bp	AAGATTTTGTCAAGGTGTGTGGCACATGGTATGTGCTCGGTCAATAGCCTTTGTATGAGCTGGAAGCCCTaGAGGGCCTCTCTCGCCAGC	+
Preference number: 4 (lower is better) Translates to: KILSRCVAHGMCSVNSLCMSWKP*RASLAS Trigger: GCTGGCGAGAGAGGCCCTCCAGGGCTTCCAGCTCAT...ACAAAGGCTATTGACCGAGCACATACCATGTGCCACACACCTTGACAAAATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR GCA 90 bp	TTCAGGTCCAGGAAGATGGGTTTGGATCCAGTCTTTGCCATTTGCTCTCTGAAAAGTCACCGGGTACTGTaGCCACCCCAAGACACATCC	+
Preference number: 4 (lower is better) Translates to: FRSRKMGLDPVFAICSLKSHRVL*PPQDTS Trigger: GGATGTGTCTTGGGGTGGGCACAGTACCCGGTGACT...TTTCAGAGAGCAAATGGCAAAGACTGGATCCAAACCCATCTTCCTGGACCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CCA 90 bp	ATAAATAAATATCCCCAAGAGTCACCGGGTACTGTGCCCACCCCAAGACACATCTATTCAGCTCAGGGGTaGGGTGGCTGGGAGCATGAA	+
Preference number: 4 (lower is better) Translates to: INKYPQESPGTVPTPRHIYSAQG*GGWEHE Trigger: TTCATGCTCCCAGCCACCCCACCCCTGAGCTGAATA...GATGTGTCTTGGGGTGGGCACAGTACCCGGTGACTCTTGGGGATATTTATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR TCA 90 bp	AAGATTTTGTCAAGGTGTGTGGCACATGGTATGTGCTCGGTCAATAGCCTTTGTGGCAGGCACTCTGTGTaGCTTTGGAGGATCCTTCTA	+
Preference number: 4 (lower is better) Translates to: KILSRCVAHGMCSVNSLCGRHSV*LWRILL Trigger: TAGAAGGATCCTCCAAAGTCACACAGAGTGCCTGCC...ACAAAGGCTATTGACCGAGCACATACCATGTGCCACACACCTTGACAAAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CCA 90 bp	ATAAATAAATATCCCCAAGAGTCACCGGGTACTGTGCCCACCCCAAGACACATCTCAGGTCCAGGAAGATaGGTTTGGATCCAGTCTTTG	+
Preference number: 4 (lower is better) Translates to: INKYPQESPGTVPTPRHISGPGR*VWIQSL Trigger: CAAAGACTGGATCCAAACCCATCTTCCTGGACCTGA...GATGTGTCTTGGGGTGGGCACAGTACCCGGTGACTCTTGGGGATATTTATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CCA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGAGGAACTGGACCAGATaGGGAATAAGGAGGCCTCCA	+
Preference number: 4 (lower is better) Translates to: CHLLSEITLKTFHSSKLQRNWTR*GIRRPP Trigger: TGGAGGCCTCCTTATTCCCCATCTGGTCCAGTTCCT...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR GCA 90 bp	TTCAGGTCCAGGAAGATGGGTTTGGATCCAGTCTTTGCCATTTGCTCTCTGAAATTTGGATCCAGTCTTTaGCATTTGCTCTCTGAAATA	+
Preference number: 4 (lower is better) Translates to: FRSRKMGLDPVFAICSLKFGSSL*HLLSEI Trigger: TATTTCAGAGAGCAAATGGCAAAGACTGGATCCAAA...TTTCAGAGAGCAAATGGCAAAGACTGGATCCAAACCCATCTTCCTGGACCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CCA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGTTTTGTCAAGGTGTGTaGCACATGGTATGTGCTCGG	+
Preference number: 4 (lower is better) Translates to: CHLLSEITLKTFHSSKLQFCQGV*HMVCAR Trigger: CCGAGCACATACCATGTGCCACACACCTTGACAAAA...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR TCA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGTCCCCATTTCACAGATaGAGATATAGGCTCAGGGAA	+
Preference number: 4 (lower is better) Translates to: CHLLSEITLKTFHSSKLQSPFHR*RYRLRE Trigger: TTCCCTGAGCCTATATCTTCATCTGTGAAATGGGGA...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CCA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGCCAGGAAGATGGGTTTaGATCCAGTCTTTGCCATTT	+
Preference number: 4 (lower is better) Translates to: CHLLSEITLKTFHSSKLQPGRWV*IQSLPF Trigger: AAATGGCAAAGACTGGATCCAAACCCATCTTCCTGG...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS GCA 90 bp	AGGAAGAGTAAGGAGCTCTGGGGAGCCCAGGGACCTGGGCTCCAGTaGAGTCTCCTTTCTTTCAGTGCCTCACTATGTTACCCTGGGAAA	+
Preference number: 5 (lower is better) Translates to: RKSKELWGAQGPGLQ*SLLSFSASLCYPGK Trigger: TTTCCCAGGGTAACATAGTGAGGCACTGAAAGAAAGGAGACTGCACTGGAGCCCAGGTCCCTGGGCTCCCCAGAGCTCCTTACTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492049.1
CDS-3UTR CAA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGTCCAGGAAGATGGGTTaGGATCCAGTCTTTGCCATT	+
Preference number: 5 (lower is better) Translates to: CHLLSEITLKTFHSSKLQSRKMG*DPVFAI Trigger: AATGGCAAAGACTGGATCCAAACCCATCTTCCTGGA...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7
CDS-3UTR CAA 90 bp	TGCCATTTGCTCTCTGAAATAACACTCAAAACATTTCACTCCTCTAAGCTTCAGTCCAGTCTTTGCCATTaGCTCTCTGAAATAACACTC	+
Preference number: 5 (lower is better) Translates to: CHLLSEITLKTFHSSKLQSSLCH*LSEITL Trigger: GAGTGTTATTTCAGAGAGCAAATGGCAAAGACTGGA...CTGAAGCTTAGAGGAGTGAAATGTTTTGAGTGTTATTTCAGAGAGCAAATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372325.7