RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFTA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000229415, ENSG00000257520

Ensembl transcript IDs: ENST00000418548.3, ENST00000518002.5, ENST00000518446.1, ENST00000518529.6, ENST00000518987.5, ENST00000519052.5, ENST00000521114.5, ENST00000521380.1, ENST00000521945.1, ENST00000524122.5, ENST00000546983.2, ENST00000677732.1

Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTGTGTTGACGTAGACCTCCATTGGTGTTCCAAATATTGCAGATaGATCTCTCTCTGCCTCCAAAATCCTCAGTCATGCAGTATGAAT +
Preference number: 1 (lower is better)
Translates to: FCVDVDLHWCSKYCR*ISLCLQNPQSCSMN
Trigger: ATTCATACTGCATGACTGAGGATTTTGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACGTCAACACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
3UTR CCA 90 bp AGCAAAAGCTATTTCTACCAAAGAACAGACATGCAGTTATTGATCTaGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCC +
Preference number: 1 (lower is better)
Translates to: SKSYFYQRTDMQLLI*NWHDYKLLCNSSSP
Trigger: GGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAATAACTGCATGTCTGTTCTTTGGTAGAAATAGCTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
3UTR-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAACTGACTAGCACCAGCTaGTGTATAAATTCTGTGTTG +
Preference number: 2 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQLTSTS*CINSVL
Trigger: CAACACAGAATTTATACAGCAGCTGGTGCTAGTCAG...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
3UTR-3UTR CCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAAGACGTAGACCTCCATTaGTGTTCCAAATATTGCAGA +
Preference number: 2 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQDVDLH*CSKYCR
Trigger: TCTGCAATATTTGGAACACCAATGGAGGTCTACGTC...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
3UTR TCA 72 bp GACGTAGACCTCCATTGGTGTTCCAAATATTGCAGATaGATCTCTCTCTGCCTCCAAAATCCTCAGTCATGC +
Preference number: 3 (lower is better)
Translates to: DVDLHWCSKYCR*ISLCLQNPQSC
Trigger: GCATGACTGAGGATTTTGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
3UTR-3UTR CAA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAATTGGTGTTCCAAATATaGCAGATGAATCTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQLVFQI*QMNLSL
Trigger: CAGAGAGAGATTCATCTGCAATATTTGGAACACCAA...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
3UTR CCA 72 bp TATTTCTACCAAAGAACAGACATGCAGTTATTGATCTaGAATTGGCATGATTACAAACTACTCTGCAATTCT +
Preference number: 3 (lower is better)
Translates to: YFYQRTDMQLLI*NWHDYKLLCNS
Trigger: AGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAATAACTGCATGTCTGTTCTTTGGTAGAAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAGGTGCCGCCTGGCCCTaGCTGTACGCCGCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPGAAWP*LYAASG
Trigger: TCCGCTGGCGGCGTACAGGCAGGGCCAGGCGGCACC...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAGTGACGGCGCCGTGGTaGCCCACGGCGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPVTAPW*PTACCC
Trigger: GCAGCAGCACGCCGTGGGGCACCACGGCGCCGTCAC...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAGGGGGAGCTGTGGGCTaGGCTCCCCAGCGGAATCGG +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPGGAVG*APQRNR
Trigger: CCGATTCCGCTGGGGAGCGCAGCCCACAGCTCCCCC...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCACCAGGAGGGGGCGAATaGCGAGGTGCGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPPGGGE*RGAGSS
Trigger: TGAGCTGCCCGCACCTCGGCATTCGCCCCCTCCTGG...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCACCCACGGCGTGCTGCTaGATGGCCGCTGTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPPTACC*MAAVGG
Trigger: ACCGCCAACAGCGGCCATGCAGCAGCACGCCGTGGG...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCATGCCCCACGGCGTGCTaGTGCATGGCCGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPCPTAC*CMAAVG
Trigger: GCCAACAGCGGCCATGCAGCAGCACGCCGTGGGGCA...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAAGGGCGAATGCCGAGGTaGGGGCAGCTCAGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQGRMPR*GQLSGR
Trigger: CCGCCCGCTGAGCTGCCCGCACCTCGGCATTCGCCC...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAAGGCCGCTGTTGGCGGTaGCGCCTGGCCCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQGRCWR*RLALPV
Trigger: TACAGGCAGGGCCAGGCGGCACCGCCAACAGCGGCC...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAAAGGGAGCGGCGTGAGTaGCCGTCTGTCTGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQRERRE*PSVCCR
Trigger: CCGGCAACAGACAGACGGGCACTCACGCCGCTCCCT...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAAGAGGGTTTCCTGTCTaGGCGTTCCCAGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPRGFPV*AFPGFK
Trigger: CTTGAAGCCTGGGAACGCGCAGACAGGAAACCCTCT...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAATGCCCGTCTGTCTGTTaGCGGGCGGAACTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQCPSVC*RAELSL
Trigger: CAGGCTCAGTTCCGCCCGGCAACAGACAGACGGGCA...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR CCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCACTGAAGAAAAAGAACTaGCGGGGAAGCGCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPLKKKN*RGSAGL
Trigger: CAGACCCGCGCTTCCCCGCCAGTTCTTTTTCTTCAG...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAGAGAACGGAGTCGTGTaGTTTGGACTCATCGACATG +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPENGVV*FGLIDM
Trigger: CATGTCGATGAGTCCAAAGCACACGACTCCGTTCTC...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAAGGCCGCCGCCCTCCATaGCCACTTTCTTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQGRRPP*PLSCSF
Trigger: AAAGCTACAAGAAAGTGGGCATGGAGGGCGGCGGCC...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAACCCGCAGCTCAGCCATaGAAAAGTGCTCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQPAAQP*KSALAS
Trigger: GGAAGCAAGAGCACTTTTGCATGGCTGAGCTGCGGG...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR TCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCATCCAAATATTGCAGATaGATCTCTCTCTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPSKYCR*ISLCLQ
Trigger: TTGGAGGCAGAGAGAGATTCATCTGCAATATTTGGA...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCATTCAGTCAGTCTCTGTaGCTGATCCTGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPFSQSL*LILKKK
Trigger: CTTTTTCTTCAGGATCAGGCACAGAGACTGACTGAA...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCACTGACTAGCACCAGCTaGTGTATAAATTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPLTSTS*CINSVL
Trigger: CAACACAGAATTTATACAGCAGCTGGTGCTAGTCAG...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR TCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCACAGACATGCAGTTATTaGTCTGGAATTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPQTCSY*SGIGMI
Trigger: AATCATGCCAATTCCAGATCAATAACTGCATGTCTG...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAACGACGAGCAAGAAACTaGTTAGGAGGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQRRARN*LGGRGF
Trigger: AAACCCTCTTCCTCCTAAGCAGTTTCTTGCTCGTCG...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAATCAGCCATGCAAAAGTaGTCTTGCTTCCCGGGAATA +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQSAMQK*SCFPGI
Trigger: TATTCCCGGGAAGCAAGAGCACTTTTGCATGGCTGA...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR TCA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAGTGAAGACACAGAGGTaGATTAGAAGAGTATATCAT +
Preference number: 4 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPVKTQR*IRRVYH
Trigger: ATGATATACTCTTCTAATTCACCTCTGTGTCTTCAC...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR GCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAAATGCAAAAGTGCTCTTaGTTCCCGGGAATAACCAAA +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQMQKCS*FPGITK
Trigger: TTTGGTTATTCCCGGGAAGCAAGAGCACTTTTGCAT...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR CCA 90 bp TTGATCTGGAATTGGCATGATTACAAACTACTCTGCAATTCTTCCTCTCCCCAATCAAATCCTGATAATTaGAGCCATTCAGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LIWNWHDYKLLCNSSSPQSNPDN*SHSVSL
Trigger: GAGACTGACTGAATGGCTCCAATTATCAGGATTTGA...TTGGGGAGAGGAAGAATTGCAGAGTAGTTTGTAATCATGCCAATTCCAGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS GCA 90 bp AGGGAGCGCGCGAGCAGGGAGCGGCGTGAGTGCCCGTCTGTCTGTTaGCGGGCGGAACTGAGCCTGAACCCCGGCGGCTGGAGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: RERASRERRECPSVC*RAELSLNPGGWSAG
Trigger: GCCAGCGCTCCAGCCGCCGGGGTTCAGGCTCAGTTCCGCCCGGCAACAGACAGACGGGCACTCACGCCGCTCCCTGCTCGCGCGCTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS GCA 90 bp CAAGGACACTGGTCTGGAGCGCCCGGGCCTCCGCGTCTCCAGGAGTaGGCGCCCAGAGCGTTTCTAGCGGAGACTGCCCAGGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QGHWSGAPGPPRLQE*APRAFLAETAQAWL
Trigger: GAGCCAGGCCTGGGCAGTCTCCGCTAGAAACGCTCTGGGCGCGCACTCCTGGAGACGCGGAGGCCCGGGCGCTCCAGACCAGTGTCCTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS CCA 90 bp CAGGAGTGCGCGCCCAGAGCGTTTCTAGCGGAGACTGCCCAGGCCTaGCTCGGATTTCAGTCGCGGGGCCCCAGGCTACTTCCCACCGGG +
Preference number: 5 (lower is better)
Translates to: QECAPRAFLAETAQA*LGFQSRGPRLLPTG
Trigger: CCCGGTGGGAAGTAGCCTGGGGCCCCGCGACTGAAATCCGAGCCAGGCCTGGGCAGTCTCCGCTAGAAACGCTCTGGGCGCGCACTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS GCA 90 bp TCCGCGTCTCCAGGAGTGCGCGCCCAGAGCGTTTCTAGCGGAGACTaGCCAGGCCTGGCTCGGATTTCAGTCGCGGGGCCCCAGGCTACT +
Preference number: 5 (lower is better)
Translates to: SASPGVRAQSVSSGD*PGLARISVAGPQAT
Trigger: AGTAGCCTGGGGCCCCGCGACTGAAATCCGAGCCAGGCCTGGGCAGTCTCCGCTAGAAACGCTCTGGGCGCGCACTCCTGGAGACGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS TCA 90 bp CTCGCGCTACCTTTTGTGCACTCGCGCCTCGAGATAGCCCCTCACTaGCGCCTGGACGCGGTGAGCGCGCTGAAGGCTGTGCGGCCTCTA +
Preference number: 5 (lower is better)
Translates to: LALPFVHSRLEIAPH*RLDAVSALKAVRPL
Trigger: TAGAGGCCGCACAGCCTTCAGCGCGCTCACCGCGTCCAGGCGTCAGTGAGGGGCTATCTCGAGGCGCGAGTGCACAAAAGGTAGCGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000677732.1
CDS CCA 90 bp AATCTAGATGGGCTCTCTTGTGGTGTCAGAGAGGGCGGGCGCCCATaGGACAGCTGCAGCAGAGGGCGGGCAGACGAGGCCCACAGGGGA +
Preference number: 5 (lower is better)
Translates to: NLDGLSCGVREGGRP*DSCSRGRADEAHRG
Trigger: TCCCCTGTGGGCCTCGTCTGCCCGCCCTCTGCTGCAGCTGTCCCATGGGCGCCCGCCCTCTCTGACACCACAAGAGAGCCCATCTAGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519052.5
ENST00000521380.1
CDS CCA 90 bp CAAACTCTAAGCTTCGTGAAGAAGCCTCCTACAAGGACACTGGTCTaGAGCGCCCGGGCCTCCGCGTCTCCAGGAGTGCGCGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: QTLSFVKKPPTRTLV*SARASASPGVRAQS
Trigger: GCTCTGGGCGCGCACTCCTGGAGACGCGGAGGCCCGGGCGCTCCAGACCAGTGTCCTTGTAGGAGGCTTCTTCACGAAGCTTAGAGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518529.6
ENST00000521114.5
ENST00000677732.1
CDS GCA 90 bp GTACCCTTGTTGGTAGCGGCAGCAGCCCGGGATCCCTGTCTCCCCTaGTCAGAGCATCTCTGTCTCGCTCTTCTCCCCGCTTCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: VPLLVAAAARDPCLP*SEHLCLALLPASEL
Trigger: AAGCTCAGAAGCGGGGAGAAGAGCGAGACAGAGATGCTCTGAGCAGGGGAGACAGGGATCCCGGGCTGCTGCCGCTACCAACAAGGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS GCA 90 bp ATCCGACGAGCAAGAAACTGCTTAGGAGGAAGAGGGTTTCCTGTCTaGGCGTTCCCAGGCTTCAAGTGTGGGCCCCGCGCCTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: IRRARNCLGGRGFPV*AFPGFKCGPRALRV
Trigger: GACCCTCAAGGCGCGGGGCCCACACTTGAAGCCTGGGAACGCGCAGACAGGAAACCCTCTTCCTCCTAAGCAGTTTCTTGCTCGTCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CCA 90 bp CAGCGTCGTGGGATGCAGCAGGGCTGTATGGACTGTTCCTGGACTTaGCACGCAAACAGCGACACAGGTGGGTATCCGCTTTTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: QRRGMQQGCMDCSWT*HANSDTGGYPLFPL
Trigger: GAGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS GCA 90 bp TCCTCCAGGGGACTCAAGATGTCAGACACTGAGAACGGAGTCGTGTaGTTTGGACTCATCGACATGATTCGGCGGCGGCTGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSRGLKMSDTENGVV*FGLIDMIRRRLVSL
Trigger: CAGGGACACCAGCCGCCGCCGAATCATGTCGATGAGTCCAAAGCACACGACTCCGTTCTCAGTGTCTGACATCTTGAGTCCCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CCA 90 bp GAACTCCTGCTTTGTGACAGCGTCGTGGGATGCAGCAGGGCTGTATaGACTGTTCCTGGACTTGGCACGCAAACAGCGACACAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: ELLLCDSVVGCSRAV*TVPGLGTQTATQVG
Trigger: ACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 90 bp ACAACACCTTGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTaGGATGCAGCAGGGCTGTATGGACTGTTCCTGGACTTGGCACGC +
Preference number: 5 (lower is better)
Translates to: TTPWPRMNSCFVTAS*DAAGLYGLFLDLAR
Trigger: GCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418548.3
ENST00000524122.5
CDS CCA 90 bp TCCATACCTTGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTaGGATGCAGCAGGGCTGTATGGACTGTTCCTGGACTTGGCACGC +
Preference number: 5 (lower is better)
Translates to: SIPWPRMNSCFVTAS*DAAGLYGLFLDLAR
Trigger: GCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS GCA 90 bp ACCTTGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATaGAGCAGGGCTGTATGGACTGTTCCTGGACTTGGCACGCAAACA +
Preference number: 5 (lower is better)
Translates to: TLASDELLLCDSVVG*SRAVWTVPGLGTQT
Trigger: TGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418548.3
ENST00000519052.5
ENST00000524122.5
CDS CCA 90 bp CTGTATGGACTGTTCCTGGACTTGGCACGCAAACAGCGACACAGGTaGGTATCCGCTTTTCCCTCTCCCTCAGGCCTGTTCTTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: LYGLFLDLARKQRHR*VSAFPSPSGLFFSG
Trigger: CCCACTGAAGAACAGGCCTGAGGGAGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521380.1
CDS GCA 90 bp ATCTTGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATaGAGCAGGGCTGTATGGACTGTTCCTGGACTTGGCACGCAAACA +
Preference number: 5 (lower is better)
Translates to: ILASDELLLCDSVVG*SRAVWTVPGLGTQT
Trigger: TGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000521114.5
ENST00000521945.1
CDS TCA 90 bp GAGGGAACGAGCAGATCGCACATTTGTTCTTTCCATATGTCCAGGTaGAGACTGGATGTCAAGCTGGTCCCCACTCGTCTCCTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: EGTSRSHICSFHMSR*RLDVKLVPTRLLPS
Trigger: GGAGGGGAGGAGACGAGTGGGGACCAGCTTGACATCCAGTCTTCACCTGGACATATGGAAAGAACAAATGTGCGATCTGCTCGTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS GCA 90 bp TCATTCTGCTTCAATTGGGCGCCTCTCATCCGACGAGCAAGAAACTaGTTAGGAGGAAGAGGGTTTCCTGTCTGCGCGTTCCCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SFCFNWAPLIRRARN*LGGRGFPVCAFPGF
Trigger: GAAGCCTGGGAACGCGCAGACAGGAAACCCTCTTCCTCCTAAGCAGTTTCTTGCTCGTCGGATGAGAGGCGCCCAATTGAAGCAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CCA 90 bp CTGTATGGACTGTTCCTGGACTTGGCACGCAAACAGCGACACAGGTaGGTATCCGCTTTTCCCTCTCCCTCAGGCCTGTTACAAAGTGGT +
Preference number: 5 (lower is better)
Translates to: LYGLFLDLARKQRHR*VSAFPSPSGLLQSG
Trigger: ACCACTTTGTAACAGGCCTGAGGGAGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS TCA 90 bp GGAAGTCAGAAAACCCGGCTCTCATTTCCTCTTATCTGGATCGCCTaGGAAGAGACTCGCGCTACCTTTTGTGCACTCGCGCCTCGAGAT +
Preference number: 5 (lower is better)
Translates to: GSQKTRLSFPLIWIA*EETRATFCALAPRD
Trigger: ATCTCGAGGCGCGAGTGCACAAAAGGTAGCGCGAGTCTCTTCTCAGGCGATCCAGATAAGAGGAAATGAGAGCCGGGTTTTCTGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000418548.3
ENST00000518446.1
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000524122.5
ENST00000677732.1
CDS TCA 90 bp GACAGCCACAGTCAGGGCCTGTGGTTTTCAAACACAACTCCAGGCTaGCTCACTGAGGGAGATCCAGTAAGCTCTTCAAACCAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: DSHSQGLWFSNTTPG*LTEGDPVSSSNQCH
Trigger: GTGGCACTGGTTTGAAGAGCTTACTGGATCTCCCTCAGTGAGTCAGCCTGGAGTTGTGTTTGAAAACCACAGGCCCTGACTGTGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS CCA 90 bp GTGCGGCCTCTAAAGTCTCAGAATTCCTCCCTGCGGCCTCAAAATTaGAGAGTTGGATTCCAGACCAAGACACTGTCACTAGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: VRPLKSQNSSLRPQN*RVGFQTKTLSLELP
Trigger: AGGGAGCTCTAGTGACAGTGTCTTGGTCTGGAATCCAACTCTCCAATTTTGAGGCCGCAGGGAGGAATTCTGAGACTTTAGAGGCCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000677732.1
CDS GCA 90 bp TTAACGAATATTCTCATGACAACACCTTGGCCTCGGATGAACTCCTaGTTTGTGACAGCGTCGTGGGATGCAGCAGGGCTGTATGGACTG +
Preference number: 5 (lower is better)
Translates to: LTNILMTTPWPRMNS*FVTASWDAAGLYGL
Trigger: CAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418548.3
ENST00000524122.5
CDS CCA 90 bp AAAGTCAGCGTCCCTACTTTAACGAATATTCTCATGACAACACCTTaGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATGCA +
Preference number: 5 (lower is better)
Translates to: KVSVPTLTNILMTTP*PRMNSCFVTASWDA
Trigger: TGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAGTAGGGACGCTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS CCA 90 bp GGCCTCAGTTTCTCCATTTTAACGAATATTCTCATGACAACACCTTaGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATGCA +
Preference number: 5 (lower is better)
Translates to: GLSFSILTNILMTTP*PRMNSCFVTASWDA
Trigger: TGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAATGGAGAAACTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524122.5
CDS CCA 90 bp ATAGAGATCAGACCCCAGAAGAACAGGAAAACTAGGCAAACAGGCTaGATACTCCACAGGAAGAGAATCTGCCCAAGAACAAAGTCAGCG +
Preference number: 5 (lower is better)
Translates to: IEIRPQKNRKTRQTG*ILHRKRICPRTKSA
Trigger: CGCTGACTTTGTTCTTGGGCAGATTCTCTTCCTGTGGAGTATCCAGCCTGTTTGCCTAGTTTTCCTGTTCTTCTGGGGTCTGATCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS CCA 90 bp TATGTTTGTGCACGTGTGTCCTCAGGTCTCTTTAGGAGTAAGCTATaGCATGTCTCTCATCATGGCCAGGGATGGAAGGGCCAACAATTA +
Preference number: 5 (lower is better)
Translates to: YVCARVSSGLFRSKL*HVSHHGQGWKGQQL
Trigger: TAATTGTTGGCCCTTCCATCCCTGGCCATGATGAGAGACATGCCATAGCTTACTCCTAAAGAGACCTGAGGACACACGTGCACAAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS-3UTR CAA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCAAGATGGTGTGCTCAGTaGGGGGTCTTTTTATTAAAC +
Preference number: 5 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPRWCAQ*GVFLLN
Trigger: GTTTAATAAAAAGACCCCCAACTGAGCACACCATCT...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS-3UTR CAA 90 bp CGTAGACCTCCATTGGTGTTCCAAATATTGCAGATGAATCTCTCTCTGCCTCCATTGGTGTTCCAAATATaGCAGATGAATCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RRPPLVFQILQMNLSLPPLVFQI*QMNLSL
Trigger: CAGAGAGAGATTCATCTGCAATATTTGGAACACCAA...TGGAGGCAGAGAGAGATTCATCTGCAATATTTGGAACACCAATGGAGGTCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS GCA 72 bp TGGTCTGGAGCGCCCGGGCCTCCGCGTCTCCAGGAGTaGGCGCCCAGAGCGTTTCTAGCGGAGACTGCCCAG +
Preference number: 6 (lower is better)
Translates to: WSGAPGPPRLQE*APRAFLAETAQ
Trigger: CTGGGCAGTCTCCGCTAGAAACGCTCTGGGCGCGCACTCCTGGAGACGCGGAGGCCCGGGCGCTCCAGACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS CCA 72 bp GGGCTCTCTTGTGGTGTCAGAGAGGGCGGGCGCCCATaGGACAGCTGCAGCAGAGGGCGGGCAGACGAGGCC +
Preference number: 6 (lower is better)
Translates to: GLSCGVREGGRP*DSCSRGRADEA
Trigger: GGCCTCGTCTGCCCGCCCTCTGCTGCAGCTGTCCCATGGGCGCCCGCCCTCTCTGACACCACAAGAGAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519052.5
ENST00000521380.1
CDS CAA 72 bp TGCGCGTTCCCAGGCTTCAAGTGTGGGCCCCGCGCCTaGAGGGTCCTTGGGCGCCTGGCGAGGGGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CAFPGFKCGPRA*RVLGRLARGSC
Trigger: ACAGCTCCCCCTCGCCAGGCGCCCAAGGACCCTCAAGGCGCGGGGCCCACACTTGAAGCCTGGGAACGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CAA 90 bp TTTCCTGTCTGCGCGTTCCCAGGCTTCAAGTGTGGGCCCCGCGCCTaGAGGGTCCTTGGGCGCCTGGCGAGGGGGAGCTGTGGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: FPVCAFPGFKCGPRA*RVLGRLARGSCGLR
Trigger: GCGCAGCCCACAGCTCCCCCTCGCCAGGCGCCCAAGGACCCTCAAGGCGCGGGGCCCACACTTGAAGCCTGGGAACGCGCAGACAGGAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS GCA 72 bp CCAGGAGTGCGCGCCCAGAGCGTTTCTAGCGGAGACTaGCCAGGCCTGGCTCGGATTTCAGTCGCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PGVRAQSVSSGD*PGLARISVAGP
Trigger: GGGCCCCGCGACTGAAATCCGAGCCAGGCCTGGGCAGTCTCCGCTAGAAACGCTCTGGGCGCGCACTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS TCA 72 bp CTGATGCTTCAGGGAGCGCGCGAGCAGGGAGCGGCGTaGGTGCCCGTCTGTCTGTTGCCGGGCGGAACTGAG +
Preference number: 6 (lower is better)
Translates to: LMLQGAREQGAA*VPVCLLPGGTE
Trigger: CTCAGTTCCGCCCGGCAACAGACAGACGGGCACTCACGCCGCTCCCTGCTCGCGCGCTCCCTGAAGCATCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS TCA 72 bp CAGCACCCGAGCCCAGAGCCACGCTGTTTTCCCCTCTaGTGCTTCAGGGAGCGCGCGAGCAGGGAGCGGCGT +
Preference number: 6 (lower is better)
Translates to: QHPSPEPRCFPL*CFRERASRERR
Trigger: ACGCCGCTCCCTGCTCGCGCGCTCCCTGAAGCATCAGAGGGGAAAACAGCGTGGCTCTGGGCTCGGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CCA 72 bp GCGCCCAGAGCGTTTCTAGCGGAGACTGCCCAGGCCTaGCTCGGATTTCAGTCGCGGGGCCCCAGGCTACTT +
Preference number: 6 (lower is better)
Translates to: APRAFLAETAQA*LGFQSRGPRLL
Trigger: AAGTAGCCTGGGGCCCCGCGACTGAAATCCGAGCCAGGCCTGGGCAGTCTCCGCTAGAAACGCTCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS TCA 72 bp CCTTTTGTGCACTCGCGCCTCGAGATAGCCCCTCACTaGCGCCTGGACGCGGTGAGCGCGCTGAAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PFVHSRLEIAPH*RLDAVSALKAV
Trigger: CACAGCCTTCAGCGCGCTCACCGCGTCCAGGCGTCAGTGAGGGGCTATCTCGAGGCGCGAGTGCACAAAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000677732.1
CDS CCA 72 bp AGCTTCGTGAAGAAGCCTCCTACAAGGACACTGGTCTaGAGCGCCCGGGCCTCCGCGTCTCCAGGAGTGCGC +
Preference number: 6 (lower is better)
Translates to: SFVKKPPTRTLV*SARASASPGVR
Trigger: GCGCACTCCTGGAGACGCGGAGGCCCGGGCGCTCCAGACCAGTGTCCTTGTAGGAGGCTTCTTCACGAAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518529.6
ENST00000521114.5
ENST00000677732.1
CDS CAA 72 bp AGCATCTCTGTCTCGCTCTTCTCCCCGCTTCTGAGCTaGGCCCAGTCCCTGACCCCCTCGCTAGCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: SISVSLFSPLLS*AQSLTPSLAER
Trigger: TCTCTCAGCTAGCGAGGGGGTCAGGGACTGGGCCAAGCTCAGAAGCGGGGAGAAGAGCGAGACAGAGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518529.6
ENST00000677732.1
CDS CAA 90 bp ACAGCGTCGTGGGATGCAGCAGGGCTGTATGGACTGTTCCTGGACTaGGCACGCAAACAGCGACACAGGTGGGTATCCGCTTTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: TASWDAAGLYGLFLD*ARKQRHRWVSAFPS
Trigger: AGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS GCA 72 bp GCCTCAGTTTCTCCATCTTGGCCTCGGATGAACTCCTaGTTTGTGACAGCGTCGTGGGATGCAGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: ASVSPSWPRMNS*FVTASWDAAGL
Trigger: CAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGATGGAGAAACTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518002.5
ENST00000518446.1
ENST00000521114.5
CDS CCA 72 bp GGGATGCAGCAGGGCTGTATGGACTGTTCCTGGACTTaGCACGCAAACAGCGACACAGGTGGGTATCCGCTT +
Preference number: 6 (lower is better)
Translates to: GMQQGCMDCSWT*HANSDTGGYPL
Trigger: AAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 72 bp CGTCGTGGGATGCAGCAGGGCTGTATGGACTGTTCCTaGACTTGGCACGCAAACAGCGACACAGGTGGGTAT +
Preference number: 6 (lower is better)
Translates to: RRGMQQGCMDCS*TWHANSDTGGY
Trigger: ATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 72 bp TGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTaGGATGCAGCAGGGCTGTATGGACTGTTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: WPRMNSCFVTAS*DAAGLYGLFLD
Trigger: GTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 72 bp CTGTTCCTGGACTTGGCACGCAAACAGCGACACAGGTaGGTATCCGCTTTTCCCTCTCCCTCAGGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LFLDLARKQRHR*VSAFPSPSGLF
Trigger: GAACAGGCCTGAGGGAGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000519052.5
ENST00000521114.5
ENST00000521380.1
ENST00000521945.1
CDS GCA 72 bp TCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATaGAGCAGGGCTGTATGGACTGTTCCTGGACTTGGC +
Preference number: 6 (lower is better)
Translates to: SDELLLCDSVVG*SRAVWTVPGLG
Trigger: GCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS GCA 72 bp CTCAGTTTCTCCATACCTTGGCCTCGGATGAACTCCTaGTTTGTGACAGCGTCGTGGGATGCAGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LSFSIPWPRMNS*FVTASWDAAGL
Trigger: CAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTATGGAGAAACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS CCA 72 bp CTGTTCCTGGACTTGGCACGCAAACAGCGACACAGGTaGGTATCCGCTTTTCCCTCTCCCTCAGGCCTGTTA +
Preference number: 6 (lower is better)
Translates to: LFLDLARKQRHR*VSAFPSPSGLL
Trigger: TAACAGGCCTGAGGGAGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS CCA 72 bp CTTTGTGACAGCGTCGTGGGATGCAGCAGGGCTGTATaGACTGTTCCTGGACTTGGCACGCAAACAGCGACA +
Preference number: 6 (lower is better)
Translates to: LCDSVVGCSRAV*TVPGLGTQTAT
Trigger: TGTCGCTGTTTGCGTGCCAAGTCCAGGAACAGTCCATACAGCCCTGCTGCATCCCACGACGCTGTCACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 72 bp CTGTTCCTGGACTTGGCACGCAAACAGCGACACAGGTaGGTATCCGCTTTTCCCTCTCCCTCAGGCACAAAG +
Preference number: 6 (lower is better)
Translates to: LFLDLARKQRHR*VSAFPSPSGTK
Trigger: CTTTGTGCCTGAGGGAGAGGGAAAAGCGGATACCCACCTGTGTCGCTGTTTGCGTGCCAAGTCCAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518002.5
ENST00000518529.6
CDS GCA 72 bp ATTCTCATGACAACACCTTGGCCTCGGATGAACTCCTaGTTTGTGACAGCGTCGTGGGATGCAGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: ILMTTPWPRMNS*FVTASWDAAGL
Trigger: CAGCCCTGCTGCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418548.3
ENST00000524122.5
CDS CCA 72 bp GCACGTGTGTCCTCAGGTCTCTTTAGGAGTAAGCTATaGCATGTCTCTCATCATGGCCAGGGATGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: ARVSSGLFRSKL*HVSHHGQGWKG
Trigger: GCCCTTCCATCCCTGGCCATGATGAGAGACATGCCATAGCTTACTCCTAAAGAGACCTGAGGACACACGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS TCA 72 bp AAAACCCGGCTCTCATTTCCTCTTATCTGGATCGCCTaGGAAGAGACTCGCGCTACCTTTTGTGCACTCGCG +
Preference number: 6 (lower is better)
Translates to: KTRLSFPLIWIA*EETRATFCALA
Trigger: CGCGAGTGCACAAAAGGTAGCGCGAGTCTCTTCTCAGGCGATCCAGATAAGAGGAAATGAGAGCCGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000418548.3
ENST00000518446.1
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000524122.5
ENST00000677732.1
CDS CCA 72 bp CGCACATTTGTTCTTTCCATATGTCCAGGTGAAGACTaGATGTCAAGCTGGTCCCCACTCGTCTCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: RTFVLSICPGED*MSSWSPLVSSP
Trigger: AGGGGAGGAGACGAGTGGGGACCAGCTTGACATCCAGTCTTCACCTGGACATATGGAAAGAACAAATGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CAA 90 bp TGTGCGGCCTCTAAAGTCTCAGAATTCCTCCCTGCGGCCTCAAAATaGGAGAGTTGGATTCCAGACCAAGACACTGTCACTAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: CAASKVSEFLPAASK*ESWIPDQDTVTRAP
Trigger: GGGAGCTCTAGTGACAGTGTCTTGGTCTGGAATCCAACTCTCCAATTTTGAGGCCGCAGGGAGGAATTCTGAGACTTTAGAGGCCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000677732.1
CDS TCA 72 bp GCCAGTCGCTTTGTGGCCACGCTGGATATTAGTAGATaGGGATCATTCTGCTTCAATTGGGCGCCTCTCATC +
Preference number: 6 (lower is better)
Translates to: ASRFVATLDISR*GSFCFNWAPLI
Trigger: GATGAGAGGCGCCCAATTGAAGCAGAATGATCCTCATCTACTAATATCCAGCGTGGCCACAAAGCGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CAA 90 bp CAAAGTCAGCGTCCCTACTTTAACGAATATTCTCATGACAACACCTaGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATGC +
Preference number: 6 (lower is better)
Translates to: QSQRPYFNEYSHDNT*ASDELLLCDSVVGC
Trigger: GCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAGTAGGGACGCTGACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS CAA 90 bp GGGCCTCAGTTTCTCCATTTTAACGAATATTCTCATGACAACACCTaGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCGTGGGATGC +
Preference number: 6 (lower is better)
Translates to: GPQFLHFNEYSHDNT*ASDELLLCDSVVGC
Trigger: GCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAATGGAGAAACTGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524122.5
CDS TCA 72 bp AGCAGATCGCACATTTGTTCTTTCCATATGTCCAGGTaGAGACTGGATGTCAAGCTGGTCCCCACTCGTCTC +
Preference number: 6 (lower is better)
Translates to: SRSHICSFHMSR*RLDVKLVPTRL
Trigger: GAGACGAGTGGGGACCAGCTTGACATCCAGTCTTCACCTGGACATATGGAAAGAACAAATGTGCGATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 72 bp GTCCCTACTTTAACGAATATTCTCATGACAACACCTTaGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCG +
Preference number: 6 (lower is better)
Translates to: VPTLTNILMTTP*PRMNSCFVTAS
Trigger: CGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAGTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS CAA 72 bp CGTCCCTACTTTAACGAATATTCTCATGACAACACCTaGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTC +
Preference number: 6 (lower is better)
Translates to: RPYFNEYSHDNT*ASDELLLCDSV
Trigger: GACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAGTAGGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418548.3
CDS CAA 90 bp CTCAGGCCTGTTCTGGGTAGACAGGGAAAATCAGTTTTGATGCCATaGATGATATGCCCAATATGTTTGTGCACGTGTGTCCTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: LRPVLGRQGKSVLMP*MICPICLCTCVLRS
Trigger: AGACCTGAGGACACACGTGCACAAACATATTGGGCATATCATCAATGGCATCAAAACTGATTTTCCCTGTCTACCCAGAACAGGCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS CCA 72 bp CTAAAGTCTCAGAATTCCTCCCTGCGGCCTCAAAATTaGAGAGTTGGATTCCAGACCAAGACACTGTCACTA +
Preference number: 6 (lower is better)
Translates to: LKSQNSSLRPQN*RVGFQTKTLSL
Trigger: TAGTGACAGTGTCTTGGTCTGGAATCCAACTCTCCAATTTTGAGGCCGCAGGGAGGAATTCTGAGACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000677732.1
CDS CAA 72 bp ACAGAGACCTTCAGAGGGAACGAGCAGATCGCACATTaGTTCTTTCCATATGTCCAGGTGAAGACTGGATGT +
Preference number: 6 (lower is better)
Translates to: TETFRGNEQIAH*FFPYVQVKTGC
Trigger: ACATCCAGTCTTCACCTGGACATATGGAAAGAACAAATGTGCGATCTGCTCGTTCCCTCTGAAGGTCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518446.1
ENST00000519052.5
ENST00000521114.5
ENST00000521945.1
ENST00000524122.5
CDS CCA 72 bp TTCTCCATTTTAACGAATATTCTCATGACAACACCTTaGCCTCGGATGAACTCCTGCTTTGTGACAGCGTCG +
Preference number: 6 (lower is better)
Translates to: FSILTNILMTTP*PRMNSCFVTAS
Trigger: CGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAATGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524122.5
CDS CAA 72 bp CTTTGTTTAAAGTGGTGGCGTAAATGGCCAGTCGCTTaGTGGCCACGCTGGATATTAGTAGATGAGGATCAT +
Preference number: 6 (lower is better)
Translates to: LCLKWWRKWPVA*WPRWILVDEDH
Trigger: ATGATCCTCATCTACTAATATCCAGCGTGGCCACAAAGCGACTGGCCATTTACGCCACCACTTTAAACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CAA 72 bp CTGATCCTGAAGAAAAAGAACCTGGTCCCTAATGAGTaGGAAGTCAGAAAACCCGGCTCTCATTTCCTCTTA +
Preference number: 6 (lower is better)
Translates to: LILKKKNLVPNE*EVRKPGSHFLL
Trigger: TAAGAGGAAATGAGAGCCGGGTTTTCTGACTTCCAACTCATTAGGGACCAGGTTCTTTTTCTTCAGGATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000418548.3
ENST00000518002.5
ENST00000518446.1
ENST00000518529.6
ENST00000518987.5
ENST00000521114.5
ENST00000524122.5
ENST00000677732.1
CDS CAA 72 bp TTTCTCCATTTTAACGAATATTCTCATGACAACACCTaGGCCTCGGATGAACTCCTGCTTTGTGACAGCGTC +
Preference number: 6 (lower is better)
Translates to: FLHFNEYSHDNT*ASDELLLCDSV
Trigger: GACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGGTGTTGTCATGAGAATATTCGTTAAAATGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524122.5
CDS CAA 90 bp ACCAAATATCTTTGTTTAAAGTGGTGGCGTAAATGGCCAGTCGCTTaGTGGCCACGCTGGATATTAGTAGATGAGGATCATTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: TKYLCLKWWRKWPVA*WPRWILVDEDHSAS
Trigger: TGAAGCAGAATGATCCTCATCTACTAATATCCAGCGTGGCCACAAAGCGACTGGCCATTTACGCCACCACTTTAAACAAAGATATTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546983.2
CDS CAA 72 bp GTTCTGGGTAGACAGGGAAAATCAGTTTTGATGCCATaGATGATATGCCCAATATGTTTGTGCACGTGTGTC +
Preference number: 6 (lower is better)
Translates to: VLGRQGKSVLMP*MICPICLCTCV
Trigger: GACACACGTGCACAAACATATTGGGCATATCATCAATGGCATCAAAACTGATTTTCCCTGTCTACCCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519052.5
CDS CCA 72 bp TTAACCAAAACACCTGGTATAACTTATAACTCACCCTaGGTGGGTGGATATTCGATAATAATTAACTGTCAG +
Preference number: 6 (lower is better)
Translates to: LTKTPGITYNSP*VGGYSIIINCQ
Trigger: CTGACAGTTAATTATTATCGAATATCCACCCACCCAGGGTGAGTTATAAGTTATACCAGGTGTTTTGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418548.3