Pregenerated sensors for SFTA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000196260, ENSG00000237814Ensembl transcript IDs: ENST00000359086.4, ENST00000383539.4, ENST00000429290.2, ENST00000448586.2, ENST00000454649.2, ENST00000457919.2, ENST00000459876.1, ENST00000460091.1, ENST00000462574.1, ENST00000466574.1, ENST00000474914.1, ENST00000489761.1, ENST00000634371.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTaGTCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCATGCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: MEQQNLGMGQIPSPR*SWSRRPALALPCSA Trigger: GGCAGAGCATGGAAGAGCCAGGGCTGGGCGCCTACTCCAAGATCACCGTGGGGAAGGGATCTGGCCCATGCCAAGATTCTGCTGCTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS TCA 90 bp | ATGTGTTGCAGACAACATGGTGTTGAGATCTTGCATGGTGGAGGGTaGCGCTGGTCCCTGAAGGGAGATGGAGGAGGAGGCAGAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: MCCRQHGVEILHGGG*RWSLKGDGGGGRAF Trigger: AAAAGCTCTGCCTCCTCCTCCATCTCCCTTCAGGGACCAGCGTCACCCTCCACCATGCAAGATCTCAACACCATGTTGTCTGCAACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359086.4 ENST00000383539.4 ENST00000429290.2 ENST00000448586.2 ENST00000454649.2 ENST00000457919.2 ENST00000459876.1 ENST00000460091.1 ENST00000462574.1 ENST00000466574.1 ENST00000474914.1 ENST00000489761.1 ENST00000634371.1 |
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| CDS TCA 90 bp | GACACAGGCTTCAATGGCTGTCATGTGTTGCAGACAACATGGTGTTaGGATCTTGCATGGTGGAGGGTGACGCTGGTCCCTGAAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: DTGFNGCHVLQTTWC*DLAWWRVTLVPEGR Trigger: TCTCCCTTCAGGGACCAGCGTCACCCTCCACCATGCAAGATCTCAACACCATGTTGTCTGCAACACATGACAGCCATTGAAGCCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359086.4 ENST00000383539.4 ENST00000429290.2 ENST00000448586.2 ENST00000454649.2 ENST00000457919.2 ENST00000459876.1 ENST00000460091.1 ENST00000462574.1 ENST00000466574.1 ENST00000474914.1 ENST00000489761.1 ENST00000634371.1 |
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| CDS CCA 90 bp | GGTATCCACGCTGGACAGATGGGAGAGAATGATTCATTCCCTGCATaGGCCATAGTTATTGTGGTCCTGGTGGCTGTGATTCTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GIHAGQMGENDSFPA*AIVIVVLVAVILLL Trigger: CAGGAGGAGAATCACAGCCACCAGGACCACAATAACTATGGCCCATGCAGGGAATGAATCATTCTCTCCCATCTGTCCAGCGTGGATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS TCA 90 bp | AGATGGCTCACAGAAAGGTATCCACGCTGGACAGATGGGAGAGAATaGTTCATTCCCTGCATGGGCCATAGTTATTGTGGTCCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWLTERYPRWTDGRE*FIPCMGHSYCGPGG Trigger: GCCACCAGGACCACAATAACTATGGCCCATGCAGGGAATGAATCATTCTCTCCCATCTGTCCAGCGTGGATACCTTTCTGTGAGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS TCA 72 bp | CAGGAGTCCTGCCCTCTAGCCCTCACCTGTTCCATGTaGGCTGCCAAGGAGGGTCAAGAGGAGGACAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: QESCPLALTCSM*AAKEGQEEDKG Trigger: CCCCTTGTCCTCCTCTTGACCCTCCTTGGCAGCTCACATGGAACAGGTGAGGGCTAGAGGGCAGGACTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459876.1 ENST00000460091.1 ENST00000462574.1 ENST00000466574.1 ENST00000474914.1 ENST00000489761.1 |
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| CDS TCA 72 bp | AGACAACATGGTGTTGAGATCTTGCATGGTGGAGGGTaGCGCTGGTCCCTGAAGGGAGATGGAGGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RQHGVEILHGGG*RWSLKGDGGGG Trigger: GCCTCCTCCTCCATCTCCCTTCAGGGACCAGCGTCACCCTCCACCATGCAAGATCTCAACACCATGTTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359086.4 ENST00000383539.4 ENST00000429290.2 ENST00000448586.2 ENST00000454649.2 ENST00000457919.2 ENST00000459876.1 ENST00000460091.1 ENST00000462574.1 ENST00000466574.1 ENST00000474914.1 ENST00000489761.1 ENST00000634371.1 |
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| CDS CCA 72 bp | AATCAACCCGGTCTACCTGATGGAGCAGCAGAATCTTaGCATGGGCCAGATCCCTTCCCCACGGTGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: NQPGLPDGAAES*HGPDPFPTVIL Trigger: CAAGATCACCGTGGGGAAGGGATCTGGCCCATGCCAAGATTCTGCTGCTCCATCAGGTAGACCGGGTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS GCA 72 bp | GTTCCTTGGCCTGATCTTCTTGGTAAGGGACAGATGTaGCCCACAGAAATCAACCCGGTCTACCTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: VPWPDLLGKGQM*PTEINPVYLME Trigger: CTCCATCAGGTAGACCGGGTTGATTTCTGTGGGGCACATCTGTCCCTTACCAAGAAGATCAGGCCAAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS TCA 72 bp | TTCAATGGCTGTCATGTGTTGCAGACAACATGGTGTTaGGATCTTGCATGGTGGAGGGTGACGCTGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FNGCHVLQTTWC*DLAWWRVTLVP Trigger: AGGGACCAGCGTCACCCTCCACCATGCAAGATCTCAACACCATGTTGTCTGCAACACATGACAGCCATTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359086.4 ENST00000383539.4 ENST00000429290.2 ENST00000448586.2 ENST00000454649.2 ENST00000457919.2 ENST00000459876.1 ENST00000460091.1 ENST00000462574.1 ENST00000466574.1 ENST00000474914.1 ENST00000489761.1 ENST00000634371.1 |
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| CDS CCA 72 bp | GCTGGACAGATGGGAGAGAATGATTCATTCCCTGCATaGGCCATAGTTATTGTGGTCCTGGTGGCTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: AGQMGENDSFPA*AIVIVVLVAVI Trigger: AATCACAGCCACCAGGACCACAATAACTATGGCCCATGCAGGGAATGAATCATTCTCTCCCATCTGTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS GCA 72 bp | CCAAGAAGGACACAGGCTTCAATGGCTGTCATGTGTTaGAGACAACATGGTGTTGAGATCTTGCATGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PRRTQASMAVMC*RQHGVEILHGG Trigger: TCCACCATGCAAGATCTCAACACCATGTTGTCTGCAACACATGACAGCCATTGAAGCCTGTGTCCTTCTTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359086.4 ENST00000383539.4 ENST00000429290.2 ENST00000448586.2 ENST00000454649.2 ENST00000457919.2 ENST00000459876.1 ENST00000460091.1 ENST00000462574.1 ENST00000466574.1 ENST00000474914.1 ENST00000489761.1 ENST00000634371.1 |
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| CDS GCA 72 bp | AGAATCAAACAGCAGGGCCACAGGTCACTCGCTATCTaGTCCTTTGGGCATCCCCATTTGCTGAAAGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: RIKQQGHRSLAI*SFGHPHLLKVN Trigger: ATTAACTTTCAGCAAATGGGGATGCCCAAAGGAGCAGATAGCGAGTGACCTGTGGCCCTGCTGTTTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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| CDS TCA 72 bp | ACAGAAAGGTATCCACGCTGGACAGATGGGAGAGAATaGTTCATTCCCTGCATGGGCCATAGTTATTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: TERYPRWTDGRE*FIPCMGHSYCG Trigger: ACCACAATAACTATGGCCCATGCAGGGAATGAATCATTCTCTCCCATCTGTCCAGCGTGGATACCTTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634371.1 |
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