Pregenerated sensors for SFTA1P (Homo sapiens)
Ensembl gene IDs: ENSG00000225383Ensembl transcript IDs: ENST00000415590.7, ENST00000434919.6, ENST00000446372.3, ENST00000602763.6, ENST00000634899.2, ENST00000652890.1, ENST00000653216.1, ENST00000656654.1, ENST00000660024.1, ENST00000663743.1, ENST00000665724.1, ENST00000667544.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACAGATGAGGAGTCCTTCTATATCCGCATTTCCCAGGGCGCTCTCTaGCAAGGTCTGAAAGAAATGCAGATTCCTTGCCTCCTAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TDEESFYIRISQGAL*QGLKEMQIPCLLVL Trigger: CAACACTAGGAGGCAAGGAATCTGCATTTCTTTCAGACCTTGGCAGAGAGCGCCCTGGGAAATGCGGATATAGAAGGACTCCTCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415590.7 |
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| CDS GCA 90 bp | GATGTTCTCCTGACCTTCTATATCCGCATTTCCCAGGGCGCTCTCTaGCAAGGTCTGAAAGAAATGCAGATTCCTTGCCTCCTAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: DVLLTFYIRISQGAL*QGLKEMQIPCLLVL Trigger: CAACACTAGGAGGCAAGGAATCTGCATTTCTTTCAGACCTTGGCAGAGAGCGCCCTGGGAAATGCGGATATAGAAGGTCAGGAGAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000434919.6 ENST00000602763.6 ENST00000652890.1 ENST00000660024.1 ENST00000667544.1 |
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| CDS GCA 90 bp | TGTCTCCTGTCCATATCATCACCTGTACAGGTGGCTGATAGAGTTTaGAAACTGCCTTCCACATGGCCTCACCTCTACAACCAGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: CLLSISSPVQVADRV*KLPSTWPHLYNQTS Trigger: TGAAGTCTGGTTGTAGAGGTGAGGCCATGTGGAAGGCAGTTTGCAAACTCTATCAGCCACCTGTACAGGTGATGATATGGACAGGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652890.1 ENST00000653216.1 |
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| CDS GCA 90 bp | AGTCACTCCTTCTCTTCTCTTTGCCACTCCATTCTTCTGTTCTTCTaGTCTTCTCTTTGTCTCTCCCTGTGGAGCCAGCAGTTTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: SHSFSSLCHSILLFF*SSLCLSLWSQQFGV Trigger: AACCCCAAACTGCTGGCTCCACAGGGAGAGACAAAGAGAAGAGCAGAAGAACAGAAGAATGGAGTGGCAAAGAGAAGAGAAGGAGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 90 bp | TGGAATTGCTCACAATTGCGCCACTGTCTACCGGCAGGGCTACTTTaGCTATGTTTTCATTTCCTCAGTGACACAGGGACAATACATGCC | + |
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Preference number: 5 (lower is better) Translates to: WNCSQLRHCLPAGLL*LCFHFLSDTGTIHA Trigger: GGCATGTATTGTCCCTGTGTCACTGAGGAAATGAAAACATAGCCAAAGTAGCCCTGCCGGTAGACAGTGGCGCAATTGTGAGCAATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS TCA 90 bp | CTGAAAGAAATGCAGATTCCTTGCCTCCTAGTGTTGCCTCTTGACTaGCACTCCACATTTTCCCACACTTCCCTCATGACTCTAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: LKEMQIPCLLVLPLD*HSTFSHTSLMTLTP Trigger: TGGGGTTAGAGTCATGAGGGAAGTGTGGGAAAATGTGGAGTGTCAGTCAAGAGGCAACACTAGGAGGCAAGGAATCTGCATTTCTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660024.1 |
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| CDS GCA 90 bp | TGTCCATATCATCACCTGTACAGGTGGCTGATAGAGTTTGCAAACTaGCTTCCACATGGCCTCACCTCTACAACCAGACTTCACATAGGT | + |
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Preference number: 5 (lower is better) Translates to: CPYHHLYRWLIEFAN*LPHGLTSTTRLHIG Trigger: ACCTATGTGAAGTCTGGTTGTAGAGGTGAGGCCATGTGGAAGGCAGTTTGCAAACTCTATCAGCCACCTGTACAGGTGATGATATGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652890.1 ENST00000653216.1 |
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| CDS TCA 90 bp | CTTGTTTGGCTTACTCGTGCCACAAGGCCCATCCTACTCTTCTGCTaGAATAAGATGAGCTTCCACGGATTTTCACCTTTGGTGCTAATG | + |
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Preference number: 5 (lower is better) Translates to: LVWLTRATRPILLFC*NKMSFHGFSPLVLM Trigger: CATTAGCACCAAAGGTGAAAATCCGTGGAAGCTCATCTTATTTCAGCAGAAGAGTAGGATGGGCCTTGTGGCACGAGTAAGCCAAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS TCA 90 bp | AGGTCTGAAAGAAATGCAGATTCCTTGCCTCCTAGTGTTGCCTCTTaGCTGACACTCCACATTTTCCCACACTTCCCTCATGACTCTAAC | + |
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Preference number: 5 (lower is better) Translates to: RSERNADSLPPSVAS*LTLHIFPHFPHDSN Trigger: GTTAGAGTCATGAGGGAAGTGTGGGAAAATGTGGAGTGTCAGTCAAGAGGCAACACTAGGAGGCAAGGAATCTGCATTTCTTTCAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660024.1 |
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| CDS GCA 90 bp | GGTGCTAATGATATTATCCTCAACCACATGAAAGCCCACCTGGAATaGTGTATAACCAGGAGAGATGTTCTCCTGACCTTCTATATCCGC | + |
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Preference number: 5 (lower is better) Translates to: GANDIILNHMKAHLE*CITRRDVLLTFYIR Trigger: GCGGATATAGAAGGTCAGGAGAACATCTCTCCTGGTTATACAGCATTCCAGGTGGGCTTTCATGTGGTTGAGGATAATATCATTAGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS CCA 90 bp | TATCTCTTAGAAGCAGAGAGTAGAAGAAGGGTGGTTACTAGAGCATaGGAGGGATGGGGGAAGAAATTGGAGAGAAGTTGGTCAAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: YLLEAESRRRVVTRA*EGWGKKLERSWSKD Trigger: ATCCTTTGACCAACTTCTCTCCAATTTCTTCCCCCATCCCTCCCATGCTCTAGTAACCACCCTTCTTCTACTCTCTGCTTCTAAGAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 90 bp | ACCTTGATTCTTCATGGTGATCAATCAGGGATCCATGTAATGCAGTaGCACCGAACCCACCCTTTACATCAGCATCACCTGGAAGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: TLILHGDQSGIHVMQ*HRTHPLHQHHLEVL Trigger: TAAAACTTCCAGGTGATGCTGATGTAAAGGGTGGGTTCGGTGCCACTGCATTACATGGATCCCTGATTGATCACCATGAAGAATCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS TCA 90 bp | AGGGCAATATTCCGGGTTAGGAATTCCATCTCTATGAGCAGGTGTTaGCATTGTTTCTTTGACTGGCAACTTGGCAACTGTATTCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RAIFRVRNSISMSRC*HCFFDWQLGNCIRL Trigger: AAGCCGAATACAGTTGCCAAGTTGCCAGTCAAAGAAACAATGTCAACACCTGCTCATAGAGATGGAATTCCTAACCCGGAATATTGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000446372.3 ENST00000602763.6 ENST00000652890.1 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS TCA 90 bp | CAATGTTTCAGGTGTGATTCCCTGGTCTATGATATGGAGACTATCTaGGCCACAGATTTTTCCTTTGGGTATTCCTTTGTCCCTGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: QCFRCDSLVYDMETI*ATDFSFGYSFVPVG Trigger: ACCCACAGGGACAAAGGAATACCCAAAGGAAAAATCTGTGGCTCAGATAGTCTCCATATCATAGACCAGGGAATCACACCTGAAACATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663743.1 |
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| CDS TCA 90 bp | GTTGTAATTCAAGGGCAATATTCCGGGTTAGGAATTCCATCTCTATaGGCAGGTGTTGACATTGTTTCTTTGACTGGCAACTTGGCAACT | + |
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Preference number: 5 (lower is better) Translates to: VVIQGQYSGLGIPSL*AGVDIVSLTGNLAT Trigger: AGTTGCCAAGTTGCCAGTCAAAGAAACAATGTCAACACCTGCTCATAGAGATGGAATTCCTAACCCGGAATATTGCCCTTGAATTACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000446372.3 ENST00000602763.6 ENST00000652890.1 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS CCA 90 bp | CCTTTACATCAGCATCACCTGGAAGTTTTAAATAATACTGACACCTaGGTGCCAGCTTCTGAGATTCTATCTCAATATCATCTGGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: PLHQHHLEVLNNTDT*VPASEILSQYHLEC Trigger: ACACTCCAGATGATATTGAGATAGAATCTCAGAAGCTGGCACCCAGGTGTCAGTATTATTTAAAACTTCCAGGTGATGCTGATGTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 90 bp | GAGATAATGCCCATGTTAAGGGTTATCATGAAGAGAAATCTCCTTTaGACTCACTATACCTATAGATTTCTGGTCTTGGGTATTTACAAG | + |
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Preference number: 5 (lower is better) Translates to: EIMPMLRVIMKRNLL*THYTYRFLVLGIYK Trigger: CTTGTAAATACCCAAGACCAGAAATCTATAGGTATAGTGAGTCCAAAGGAGATTTCTCTTCATGATAACCCTTAACATGGGCATTATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS TCA 90 bp | GACATTGGGATTTTAAAAGTTCCCAGCCCAGACAGAATTATGATATaGTCTAGCAATCACACTACTGGCTATATATCCAAAGGAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: DIGILKVPSPDRIMI*SSNHTTGYISKGNK Trigger: TTTATTTCCTTTGGATATATAGCCAGTAGTGTGATTGCTAGATCATATCATAATTCTGTCTGGGCTGGGAACTTTTAAAATCCCAATGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CAA 72 bp | GCACTGGCTCCGGGGTCAGCCACACAGGAGCTGGAATaGCTCACAATTGCGCCACTGTCTACCGGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ALAPGSATQELE*LTIAPLSTGRA Trigger: AGCCCTGCCGGTAGACAGTGGCGCAATTGTGAGCAATTCCAGCTCCTGTGTGGCTGACCCCGGAGCCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS GCA 72 bp | CACTGGCTCCGGGGTCAGCCACACAGGAGCTGGAATTaGTCACAATTGCGCCACTGTCTACCGGCAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: HWLRGQPHRSWN*SQLRHCLPAGL Trigger: TAGCCCTGCCGGTAGACAGTGGCGCAATTGTGAGCAATTCCAGCTCCTGTGTGGCTGACCCCGGAGCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CAA 72 bp | CGGGGTCAGCCACACAGGAGCTGGAATTGCTCACAATaGCGCCACTGTCTACCGGCAGGGCTACTTTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RGQPHRSWNCSQ*RHCLPAGLLWL Trigger: TAGCCAAAGTAGCCCTGCCGGTAGACAGTGGCGCAATTGTGAGCAATTCCAGCTCCTGTGTGGCTGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS GCA 72 bp | GGGGTCAGCCACACAGGAGCTGGAATTGCTCACAATTaGGCCACTGTCTACCGGCAGGGCTACTTTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: GVSHTGAGIAHN*ATVYRQGYFGY Trigger: ATAGCCAAAGTAGCCCTGCCGGTAGACAGTGGCGCAATTGTGAGCAATTCCAGCTCCTGTGTGGCTGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 72 bp | GGTCTAGGCCAAGGTGGAAAATCTCTGGTAAAGCACTaGCTCCGGGGTCAGCCACACAGGAGCTGGAATTGC | + |
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Preference number: 6 (lower is better) Translates to: GLGQGGKSLVKH*LRGQPHRSWNC Trigger: GCAATTCCAGCTCCTGTGTGGCTGACCCCGGAGCCAGTGCTTTACCAGAGATTTTCCACCTTGGCCTAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS GCA 72 bp | TTCCCACACTTCCCTCATGACTCTAACCCCAGTACTTaGGGAAACCACAGGCTCAGAGGGTTGGGTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FPHFPHDSNPST*GNHRLRGLGLL Trigger: AAGCAAACCCAACCCTCTGAGCCTGTGGTTTCCGCAAGTACTGGGGTTAGAGTCATGAGGGAAGTGTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660024.1 |
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| CDS GCA 72 bp | GAGTCCTTCTATATCCGCATTTCCCAGGGCGCTCTCTaGCAAGGTCTGAAAGAAATGCAGATTCCTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ESFYIRISQGAL*QGLKEMQIPCL Trigger: GAGGCAAGGAATCTGCATTTCTTTCAGACCTTGGCAGAGAGCGCCCTGGGAAATGCGGATATAGAAGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415590.7 |
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| CDS GCA 72 bp | CTGACCTTCTATATCCGCATTTCCCAGGGCGCTCTCTaGCAAGGTCTGAAAGAAATGCAGATTCCTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LTFYIRISQGAL*QGLKEMQIPCL Trigger: GAGGCAAGGAATCTGCATTTCTTTCAGACCTTGGCAGAGAGCGCCCTGGGAAATGCGGATATAGAAGGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000434919.6 ENST00000602763.6 ENST00000652890.1 ENST00000660024.1 ENST00000667544.1 |
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| CDS GCA 72 bp | CATCACCTGTACAGGTGGCTGATAGAGTTTGCAAACTaGCTTCCACATGGCCTCACCTCTACAACCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: HHLYRWLIEFAN*LPHGLTSTTRL Trigger: AAGTCTGGTTGTAGAGGTGAGGCCATGTGGAAGGCAGTTTGCAAACTCTATCAGCCACCTGTACAGGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652890.1 ENST00000653216.1 |
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| CDS CCA 72 bp | GAGAGGGGGATGAAGAAATACATTTCCATCCTGAGGTaGTCTGCCATCTCACTTGAAGAGGTGCTGGAATGC | + |
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Preference number: 6 (lower is better) Translates to: ERGMKKYISILR*SAISLEEVLEC Trigger: GCATTCCAGCACCTCTTCAAGTGAGATGGCAGACCACCTCAGGATGGAAATGTATTTCTTCATCCCCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434919.6 |
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| CDS CCA 72 bp | GAGGAGTCAATTGATGGTGAATGCCTTTCCCTTGTTTaGCTTACTCGTGCCACAAGGCCCATCCTACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EESIDGECLSLV*LTRATRPILLF Trigger: GAAGAGTAGGATGGGCCTTGTGGCACGAGTAAGCCAAACAAGGGAAAGGCATTCACCATCAATTGACTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS CCA 72 bp | TCACAATTGCGCCACTGTCTACCGGCAGGGCTACTTTaGCTATGTTTTCATTTCCTCAGTGACACAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: SQLRHCLPAGLL*LCFHFLSDTGT Trigger: TGTCCCTGTGTCACTGAGGAAATGAAAACATAGCCAAAGTAGCCCTGCCGGTAGACAGTGGCGCAATTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 72 bp | CTTCATGGTGATCAATCAGGGATCCATGTAATGCAGTaGCACCGAACCCACCCTTTACATCAGCATCACCTG | + |
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Preference number: 6 (lower is better) Translates to: LHGDQSGIHVMQ*HRTHPLHQHHL Trigger: CAGGTGATGCTGATGTAAAGGGTGGGTTCGGTGCCACTGCATTACATGGATCCCTGATTGATCACCATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CAA 72 bp | CAGATGAGGAGTCAATTGATGGTGAATGCCTTTCCCTaGTTTGGCTTACTCGTGCCACAAGGCCCATCCTAC | + |
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Preference number: 6 (lower is better) Translates to: QMRSQLMVNAFP*FGLLVPQGPSY Trigger: GTAGGATGGGCCTTGTGGCACGAGTAAGCCAAACAAGGGAAAGGCATTCACCATCAATTGACTCCTCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS CAA 90 bp | CTCTTCTCTTTGCCACTCCATTCTTCTGTTCTTCTGCTCTTCTCTTaGTCTCTCCCTGTGGAGCCAGCAGTTTGGGGTTTATGTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LFSLPLHSSVLLLFS*SLPVEPAVWGLCGY Trigger: GTACCCACATAAACCCCAAACTGCTGGCTCCACAGGGAGAGACAAAGAGAAGAGCAGAAGAACAGAAGAATGGAGTGGCAAAGAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS TCA 72 bp | GGCAGGGCTACTTTGGCTATGTTTTCATTTCCTCAGTaGCACAGGGACAATACATGCCTCATCGTGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRATLAMFSFPQ*HRDNTCLIVLL Trigger: CAGAAGCACGATGAGGCATGTATTGTCCCTGTGTCACTGAGGAAATGAAAACATAGCCAAAGTAGCCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS TCA 72 bp | ATGCAGATTCCTTGCCTCCTAGTGTTGCCTCTTGACTaGCACTCCACATTTTCCCACACTTCCCTCATGACT | + |
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Preference number: 6 (lower is better) Translates to: MQIPCLLVLPLD*HSTFSHTSLMT Trigger: AGTCATGAGGGAAGTGTGGGAAAATGTGGAGTGTCAGTCAAGAGGCAACACTAGGAGGCAAGGAATCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660024.1 |
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| CDS GCA 72 bp | TCCATATCATCACCTGTACAGGTGGCTGATAGAGTTTaGAAACTGCCTTCCACATGGCCTCACCTCTACAAC | + |
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Preference number: 6 (lower is better) Translates to: SISSPVQVADRV*KLPSTWPHLYN Trigger: GTTGTAGAGGTGAGGCCATGTGGAAGGCAGTTTGCAAACTCTATCAGCCACCTGTACAGGTGATGATATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652890.1 ENST00000653216.1 |
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| CDS CCA 72 bp | GAGAGGGGGATGAAGAAATACATTTCCATCCTGAGGTaGTCTGCCATCTCACTTGAAGAGGTGCTACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: ERGMKKYISILR*SAISLEEVLQE Trigger: TTCCTGTAGCACCTCTTCAAGTGAGATGGCAGACCACCTCAGGATGGAAATGTATTTCTTCATCCCCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000415590.7 ENST00000652890.1 ENST00000656654.1 ENST00000660024.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS CCA 72 bp | GAGAGGGGGATGAAGAAATACATTTCCATCCTGAGGTaGTCTGCCATCTCACTTGAAGAGGTGCCTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: ERGMKKYISILR*SAISLEEVPRD Trigger: ATCTCTAGGCACCTCTTCAAGTGAGATGGCAGACCACCTCAGGATGGAAATGTATTTCTTCATCCCCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634899.2 |
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| CDS TCA 72 bp | CTTACTCGTGCCACAAGGCCCATCCTACTCTTCTGCTaGAATAAGATGAGCTTCCACGGATTTTCACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LTRATRPILLFC*NKMSFHGFSPL Trigger: CAAAGGTGAAAATCCGTGGAAGCTCATCTTATTTCAGCAGAAGAGTAGGATGGGCCTTGTGGCACGAGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS TCA 72 bp | AGAAATGCAGATTCCTTGCCTCCTAGTGTTGCCTCTTaGCTGACACTCCACATTTTCCCACACTTCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RNADSLPPSVAS*LTLHIFPHFPH Trigger: ATGAGGGAAGTGTGGGAAAATGTGGAGTGTCAGTCAAGAGGCAACACTAGGAGGCAAGGAATCTGCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602763.6 ENST00000660024.1 |
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| CDS CCA 72 bp | GAGAGGGGGATGAAGAAATACATTTCCATCCTGAGGTaGTCTGCCATCTCACTTGAAGAGGTGCTTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ERGMKKYISILR*SAISLEEVLFL Trigger: GAGAAAAAGCACCTCTTCAAGTGAGATGGCAGACCACCTCAGGATGGAAATGTATTTCTTCATCCCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000446372.3 ENST00000602763.6 ENST00000653216.1 ENST00000663743.1 |
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| CDS CCA 72 bp | AGTAGAAGAAGGGTGGTTACTAGAGCATGGGAGGGATaGGGGAAGAAATTGGAGAGAAGTTGGTCAAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SRRRVVTRAWEG*GKKLERSWSKD Trigger: ATCCTTTGACCAACTTCTCTCCAATTTCTTCCCCCATCCCTCCCATGCTCTAGTAACCACCCTTCTTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS GCA 72 bp | GATATTATCCTCAACCACATGAAAGCCCACCTGGAATaGTGTATAACCAGGAGAGATGTTCTCCTGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: DIILNHMKAHLE*CITRRDVLLTF Trigger: GAAGGTCAGGAGAACATCTCTCCTGGTTATACAGCATTCCAGGTGGGCTTTCATGTGGTTGAGGATAATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS TCA 72 bp | TTCCGGGTTAGGAATTCCATCTCTATGAGCAGGTGTTaGCATTGTTTCTTTGACTGGCAACTTGGCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: FRVRNSISMSRC*HCFFDWQLGNC Trigger: ACAGTTGCCAAGTTGCCAGTCAAAGAAACAATGTCAACACCTGCTCATAGAGATGGAATTCCTAACCCGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000446372.3 ENST00000602763.6 ENST00000652890.1 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS TCA 72 bp | CAAGGGCAATATTCCGGGTTAGGAATTCCATCTCTATaGGCAGGTGTTGACATTGTTTCTTTGACTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: QGQYSGLGIPSL*AGVDIVSLTGN Trigger: GTTGCCAGTCAAAGAAACAATGTCAACACCTGCTCATAGAGATGGAATTCCTAACCCGGAATATTGCCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000446372.3 ENST00000602763.6 ENST00000652890.1 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS GCA 72 bp | TTCTCTTCTCTTTGCCACTCCATTCTTCTGTTCTTCTaGTCTTCTCTTTGTCTCTCCCTTATTTGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSLCHSILLFF*SSLCLSLICRR Trigger: CCTCCTGCAAATAAGGGAGAGACAAAGAGAAGAGCAGAAGAACAGAAGAATGGAGTGGCAAAGAGAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000434919.6 ENST00000446372.3 ENST00000602763.6 ENST00000634899.2 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS GCA 72 bp | CTCTTAAAAACAGATGAGGAGTCAATTGATGGTGAATaGCTTTCCCTTGTTTGGCTTACTCGTGCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLKTDEESIDGE*LSLVWLTRATR Trigger: CCTTGTGGCACGAGTAAGCCAAACAAGGGAAAGGCATTCACCATCAATTGACTCCTCATCTGTTTTTAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS TCA 72 bp | TTCCATCTCTATGAGCAGGTGTTGACATTGTTTCTTTaGCTGGCAACTTGGCAACTGTATTCGGCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FHLYEQVLTLFL*LATWQLYSAFL Trigger: AAGGAAAGCCGAATACAGTTGCCAAGTTGCCAGTCAAAGAAACAATGTCAACACCTGCTCATAGAGATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000446372.3 ENST00000602763.6 ENST00000652890.1 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS GCA 72 bp | GTCTTGTCAATGTTCAGTCACTCCTTCTCTTCTCTTTaGCACTCCATTCTTCTGTTCTTCTGCTCTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLSMFSHSFSSL*HSILLFFCSSL Trigger: AAGAGAAGAGCAGAAGAACAGAAGAATGGAGTGGCAAAGAGAAGAGAAGGAGTGACTGAACATTGACAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000415590.7 ENST00000434919.6 ENST00000446372.3 ENST00000602763.6 ENST00000634899.2 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS CAA 72 bp | AGTCTTGTCAATGTTCAGTCACTCCTTCTCTTCTCTTaGCCACTCCATTCTTCTGTTCTTCTGCTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLVNVQSLLLFS*PLHSSVLLLFS Trigger: AGAGAAGAGCAGAAGAACAGAAGAATGGAGTGGCAAAGAGAAGAGAAGGAGTGACTGAACATTGACAAGACT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000415590.7 ENST00000434919.6 ENST00000446372.3 ENST00000602763.6 ENST00000634899.2 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS CAA 90 bp | CATTGTTTCTTTGACTGGCAACTTGGCAACTGTATTCGGCTTTCCTaGAAAACTCAGATTTCCCTCTTAAAAACAGATGAGGAGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HCFFDWQLGNCIRLS*KTQISLLKTDEESF Trigger: GAAGGACTCCTCATCTGTTTTTAAGAGGGAAATCTGAGTTTTCAAGGAAAGCCGAATACAGTTGCCAAGTTGCCAGTCAAAGAAACAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415590.7 |
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| CDS CAA 90 bp | CATTGTTTCTTTGACTGGCAACTTGGCAACTGTATTCGGCTTTCCTaGAAAACTCAGATTTCCCTCTTAAAAACAGATGAGGAGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HCFFDWQLGNCIRLS*KTQISLLKTDEESC Trigger: ACAGGACTCCTCATCTGTTTTTAAGAGGGAAATCTGAGTTTTCAAGGAAAGCCGAATACAGTTGCCAAGTTGCCAGTCAAAGAAACAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000663743.1 ENST00000665724.1 |
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| CDS CAA 90 bp | CATTGTTTCTTTGACTGGCAACTTGGCAACTGTATTCGGCTTTCCTaGAAAACTCAGATTTCCCTCTTAAAAACAGATGAGGAGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: HCFFDWQLGNCIRLS*KTQISLLKTDEESK Trigger: TTTGGACTCCTCATCTGTTTTTAAGAGGGAAATCTGAGTTTTCAAGGAAAGCCGAATACAGTTGCCAAGTTGCCAGTCAAAGAAACAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656654.1 |
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| CDS CCA 72 bp | CCCATGTTAAGGGTTATCATGAAGAGAAATCTCCTTTaGACTCACTATACCTATAGATTTCTGGTCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PMLRVIMKRNLL*THYTYRFLVLG Trigger: ACCCAAGACCAGAAATCTATAGGTATAGTGAGTCCAAAGGAGATTTCTCTTCATGATAACCCTTAACATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 72 bp | TCTATCTCAATATCATCTGGAGTGTGCCATGGACATTaGGATTTTAAAAGTTCCCAGCCCAGACAGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: SISISSGVCHGH*DFKSSQPRQNY Trigger: ATAATTCTGTCTGGGCTGGGAACTTTTAAAATCCCAATGTCCATGGCACACTCCAGATGATATTGAGATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 72 bp | CAGCATCACCTGGAAGTTTTAAATAATACTGACACCTaGGTGCCAGCTTCTGAGATTCTATCTCAATATCAT | + |
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Preference number: 6 (lower is better) Translates to: QHHLEVLNNTDT*VPASEILSQYH Trigger: ATGATATTGAGATAGAATCTCAGAAGCTGGCACCCAGGTGTCAGTATTATTTAAAACTTCCAGGTGATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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| CDS CCA 72 bp | AAAGACTGTAAGATCAATGTTTCAGGTGTGATTCCCTaGTCTATGATATGGAGACTATCTGAGCCACAGATT | + |
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Preference number: 6 (lower is better) Translates to: KDCKINVSGVIP*SMIWRLSEPQI Trigger: AATCTGTGGCTCAGATAGTCTCCATATCATAGACCAGGGAATCACACCTGAAACATTGATCTTACAGTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663743.1 |
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| CDS CAA 72 bp | TTTGACTGGCAACTTGGCAACTGTATTCGGCTTTCCTaGAAAACTCAGATTTCCCTCTTAAAAACAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: FDWQLGNCIRLS*KTQISLLKTDE Trigger: CTCATCTGTTTTTAAGAGGGAAATCTGAGTTTTCAAGGAAAGCCGAATACAGTTGCCAAGTTGCCAGTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000415590.7 ENST00000446372.3 ENST00000602763.6 ENST00000652890.1 ENST00000653216.1 ENST00000656654.1 ENST00000660024.1 ENST00000663743.1 ENST00000665724.1 ENST00000667544.1 |
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| CDS CAA 90 bp | CATTGTTTCTTTGACTGGCAACTTGGCAACTGTATTCGGCTTTCCTaGAAAACTCAGATTTCCCTCTTAAAAACAGATGAGGAGTCAATT | + |
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Preference number: 6 (lower is better) Translates to: HCFFDWQLGNCIRLS*KTQISLLKTDEESI Trigger: AATTGACTCCTCATCTGTTTTTAAGAGGGAAATCTGAGTTTTCAAGGAAAGCCGAATACAGTTGCCAAGTTGCCAGTCAAAGAAACAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446372.3 ENST00000667544.1 |
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| CDS TCA 72 bp | ATATGCATAAAATTCCATATGCATTTCACTCAAGTTTaGGTTACAGCCAATCCTCACCTTGATTCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: ICIKFHMHFTQV*VTANPHLDSSW Trigger: CCATGAAGAATCAAGGTGAGGATTGGCTGTAACTCAAACTTGAGTGAAATGCATATGGAATTTTATGCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652890.1 |
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