RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFT2D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000213064

Ensembl transcript IDs: ENST00000271375.7, ENST00000367829.5, ENST00000471981.1, ENST00000630869.1

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACTGGGACTATTTAAAGGTCACTGGGCAGGCGTGCCTACTTCCTaGTGGCTGCACAGCAGGGATCTGTCTTCCCACCCCACTCTCCCC +
Preference number: 1 (lower is better)
Translates to: TLGLFKGHWAGVPTS*WLHSRDLSSHPTLP
Trigger: GGGGAGAGTGGGGTGGGAAGACAGATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCACGCCTGCCCAGTGACCTTTAAATAGTCCCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp AACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATaGTGTCCTGATGGGAGCTGTCTGAGCAAACTGGCCACAGGCCGT +
Preference number: 1 (lower is better)
Translates to: NAGRPWEAGSCKSCQ*CPDGSCLSKLATGR
Trigger: ACGGCCTGTGGCCAGTTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 90 bp CAGGGTCATGCAAAAGCTGCCAATGGTGTCCTGATGGGAGCTGTCTaGGCAAACTGGCCACAGGCCGTGAGTGAAAGCAAAGCAGAAGCC +
Preference number: 1 (lower is better)
Translates to: QGHAKAANGVLMGAV*ANWPQAVSESKAEA
Trigger: GGCTTCTGCTTTGCTTTCACTCACGGCCTGTGGCCAGTTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp GCTAAGTGCAAACACTGGGACTATTTAAAGGTCACTGGGCAGGCGTaGCTACTTCCTGCTGGCTGCACAGCAGGGATCTGTCTTCCCACC +
Preference number: 1 (lower is better)
Translates to: AKCKHWDYLKVTGQA*LLPAGCTAGICLPT
Trigger: GGTGGGAAGACAGATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCACGCCTGCCCAGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp AGGAAAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTaGCAATGGTGTCCTGATGGGAGCTGTCTGAGCAAACTGGCCACA +
Preference number: 1 (lower is better)
Translates to: RKNAGRPWEAGSCKS*QWCPDGSCLSKLAT
Trigger: TGTGGCCAGTTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp ATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGGTCTaGGATAGGCTCTTTACCTTCTCAGAGGATGGAGGCAATACCATT +
Preference number: 1 (lower is better)
Translates to: ISCQEPLPDASTRGV*DRLFTFSEDGGNTI
Trigger: AATGGTATTGCCTCCATCCTCTGAGAAGGTAAAGAGCCTATCCCAGACCCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 90 bp CACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTaGAGCTGTGGCTTTGGGTGGATCCAAAAACCAGTGTGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: HNQKQARKLWGHEGG*SCGFGWIQKPVWAL
Trigger: CAAGGCCCACACTGGTTTTTGGATCCACCCAAAGCCACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp GAGACCACCTGCAGTTTATCCCCAGTGTCCCCAGCACAGGCTAAGTaGAAACACTGGGACTATTTAAAGGTCACTGGGCAGGCGTGCCTA +
Preference number: 1 (lower is better)
Translates to: ETTCSLSPVSPAQAK*KHWDYLKVTGQACL
Trigger: TAGGCACGCCTGCCCAGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGCCTGTGCTGGGGACACTGGGGATAAACTGCAGGTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp GTCATTTGTAGGATGACTCTGGAGGTCCTGGAGGGCCAGGAATGCTaGCTGACAAGACAGGGCACTAATCGTAGTCAGGCAACAAGGAGG +
Preference number: 1 (lower is better)
Translates to: VICRMTLEVLEGQEC*LTRQGTNRSQATRR
Trigger: CCTCCTTGTTGCCTGACTACGATTAGTGCCCTGTCTTGTCAGCCAGCATTCCTGGCCCTCCAGGACCTCCAGAGTCATCCTACAAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp GGCAACTTAAGGAAAAACGCAGGAAGACCCTGGGAGGCAGGGTCATaGAAAAGCTGCCAATGGTGTCCTGATGGGAGCTGTCTGAGCAAA +
Preference number: 1 (lower is better)
Translates to: GNLRKNAGRPWEAGS*KSCQWCPDGSCLSK
Trigger: TTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTTTCCTTAAGTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp TGCAGTTTATCCCCAGTGTCCCCAGCACAGGCTAAGTGCAAACACTaGGACTATTTAAAGGTCACTGGGCAGGCGTGCCTACTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: CSLSPVSPAQAKCKH*DYLKVTGQACLLPA
Trigger: AGCAGGAAGTAGGCACGCCTGCCCAGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGCCTGTGCTGGGGACACTGGGGATAAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp AGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTTGTTCTCAGATaGCAGAGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATG +
Preference number: 1 (lower is better)
Translates to: RLSRGLSKAESLVLR*QSRSRLTLCRTTVM
Trigger: CATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACTCTGGCATCTGAGAACAAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR GCA 90 bp CCTTCCCAGACAAGACATCTTGAGCTAGGATCTGAGCTACGGCTATaGAGAGGAGCAGAACTGAAGGCTCCGTTTGAGCCCTTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: PSQTRHLELGSELRL*RGAELKAPFEPFLQ
Trigger: TTGCAGAAAGGGCTCAAACGGAGCCTTCAGTTCTGCTCCTCTGCATAGCCGTAGCTCAGATCCTAGCTCAAGATGTCTTGTCTGGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 90 bp TTGCCACCTGGGAATCACTTGCACCCAAGGCTTATGTGCTGTTGCTaGATAGGTTTGTATTCATGGGAATTCAGTGGGACAACATCCAGA +
Preference number: 1 (lower is better)
Translates to: LPPGNHLHPRLMCCC*IGLYSWEFSGTTSR
Trigger: TCTGGATGTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGCCTTGGGTGCAAGTGATTCCCAGGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR GCA 90 bp CAAAAACTAGAGGCATTCCCTTGGAAAACCAGCACAAGACAAGGATaGCCTCTCTCACCATTCCTACTCAACATAGTACTGGAAGTTCTG +
Preference number: 1 (lower is better)
Translates to: QKLEAFPWKTSTRQG*PLSPFLLNIVLEVL
Trigger: CAGAACTTCCAGTACTATGTTGAGTAGGAATGGTGAGAGAGGGCATCCTTGTCTTGTGCTGGTTTTCCAAGGGAATGCCTCTAGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp CAGGACAGTGCTTCCATATGGCTGGCTGAGCACCATATTCCAATCTaGAAAAGAGTCACCTTATTGGTTCCCTTAACTTCCAAAATGCAG +
Preference number: 1 (lower is better)
Translates to: QDSASIWLAEHHIPI*KRVTLLVPLTSKMQ
Trigger: CTGCATTTTGGAAGTTAAGGGAACCAATAAGGTGACTCTTTTGCAGATTGGAATATGGTGCTCAGCCAGCCATATGGAAGCACTGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp ATCAGATGCCATCTCATGCCAGTTAGAATGGCAATCATTAAAAAGTaGCATGGTGGCCACAGATGCTGGAAAGGACAGGGAGAAATAGGA +
Preference number: 1 (lower is better)
Translates to: IRCHLMPVRMAIIKK*HGGHRCWKGQGEIG
Trigger: TCCTATTTCTCCCTGTCCTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTCTAACTGGCATGAGATGGCATCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp ACAGCCAATATCATACTGAATGGGCAAAAACTAGAGGCATTCCCTTaGAAAACCAGCACAAGACAAGGATGCCCTCTCTCACCATTCCTA +
Preference number: 1 (lower is better)
Translates to: TANIILNGQKLEAFP*KTSTRQGCPLSPFL
Trigger: TAGGAATGGTGAGAGAGGGCATCCTTGTCTTGTGCTGGTTTTCCAAGGGAATGCCTCTAGTTTTTGCCCATTCAGTATGATATTGGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp TGCAAATCAAAACCACCATCAGATGCCATCTCATGCCAGTTAGAATaGCAATCATTAAAAAGTGGCATGGTGGCCACAGATGCTGGAAAG +
Preference number: 1 (lower is better)
Translates to: CKSKPPSDAISCQLE*QSLKSGMVATDAGK
Trigger: CTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTCTAACTGGCATGAGATGGCATCTGATGGTGGTTTTGATTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 90 bp GACATTCAACAGGCACAGAGCAACAACATTCACCCAAATACCAGCTaGAATTTGTCCTTTAAGGATGCCTCACAAGGATATTATGTCCAG +
Preference number: 1 (lower is better)
Translates to: DIQQAQSNNIHPNTS*NLSFKDASQGYYVQ
Trigger: CTGGACATAATATCCTTGTGAGGCATCCTTAAAGGACAAATTGCAGCTGGTATTTGGGTGAATGTTGTTGCTCTGTGCCTGTTGAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 90 bp GTTAGAATGGCAATCATTAAAAAGTGGCATGGTGGCCACAGATGCTaGAAAGGACAGGGAGAAATAGGAATACTTTTACACTGTTGGTGG +
Preference number: 1 (lower is better)
Translates to: VRMAIIKKWHGGHRC*KGQGEIGILLHCWW
Trigger: CCACCAACAGTGTAAAAGTATTCCTATTTCTCCCTGTCCTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTCTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 90 bp CATCTGACTTCAAAGCCTACATTCACTACTAGTATGCTATACAGGTaGCATCTTAAAAGGTACCTTGGCCTCATGTCCCACAAAGTCAAT +
Preference number: 1 (lower is better)
Translates to: HLTSKPTFTTSMLYR*HLKRYLGLMSHKVN
Trigger: ATTGACTTTGTGGGACATGAGGCCAAGGTACCTTTTAAGATGTCACCTGTATAGCATACTAGTAGTGAATGTAGGCTTTGAAGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 90 bp TGTTGTTTGTGGCTGTTTATTAAATGTAGTGGCACAACTTTGTTGTaGATATGTACCATCATTTGCTACAATCTAGACAGATCATCCTGT +
Preference number: 1 (lower is better)
Translates to: CCLWLFIKCSGTTLL*ICTIICYNLDRSSC
Trigger: ACAGGATGATCTGTCTAGATTGTAGCAAATGATGGTACATATTCACAACAAAGTTGTGCCACTACATTTAATAAACAGCCACAAACAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CCA 90 bp ACTCAGAGAGCCAACAGCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATGTTAGCACGGGCGTGGTaGCGGGCACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: TQRANSPGQITPGQCFHMLARAW*RAPVIP
Trigger: TGGGATTACAGGTGCCCGCCACCACGCCCGTGCTAA...CATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGCTGTTGGCTCTCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CCA 90 bp ACTCAGAGAGCCAACAGCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATGAGCTTCCAAAAGAGATaGGCAGGGAGGGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TQRANSPGQITPGQCFHMSFQKR*AGRARE
Trigger: CTCCCTGGCCCTCCCTGCCCATCTCTTTTGGAAGCT...CATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGCTGTTGGCTCTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR TCA 90 bp ACTCAGAGAGCCAACAGCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATGGCCAGGAATGCTGGCTaGCAAGACAGGGCACTAATC +
Preference number: 2 (lower is better)
Translates to: TQRANSPGQITPGQCFHMARNAG*QDRALI
Trigger: GATTAGTGCCCTGTCTTGTCAGCCAGCATTCCTGGC...CATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGCTGTTGGCTCTCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR GCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCACAAGACCCATCTCCTaGCAAGAACCCCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVTRPIS*QEPLPD
Trigger: GTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGT...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR TCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGCCCTTGCAAATGGTATaGAGGAAAGGCTGTACCACG +
Preference number: 2 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLPLQMV*RKGCTT
Trigger: CGTGGTACAGCCTTTCCTTCATACCATTTGCAAGGG...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630869.1
3UTR-3UTR GCA 90 bp CAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGAGCAGACTCACTCTATaGAGGACCACGGTGATGGCT +
Preference number: 2 (lower is better)
Translates to: QTHSMQDHGDGFHAEGQVSRLTL*RTTVMA
Trigger: AGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCT...CACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR CCA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGATGCTGAGGGACAAGTaGACCCCAAAACTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVMLRDK*TPKLCP
Trigger: GGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCAT...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCAGGAGGCTGAAGCTGTaGCTTTGGGTGGATCCAAAA +
Preference number: 2 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVRRLKL*LWVDPK
Trigger: TTTTGGATCCACCCAAAGCCACAGCTTCAGCCTCCT...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR TCA 90 bp CACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTCTCATCCTGTGCTACTaGCATTCAGGTTCGAGAATG +
Preference number: 2 (lower is better)
Translates to: HGDGFHAEGQVDPKTLSLLILCY*HSGSRM
Trigger: CATTCTCGAACCTGAATGTCAGTAGCACAGGATGAG...AAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR TCA 90 bp CAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGAGGAAACAGGTACATaGGGAAGATTCCACTCCACA +
Preference number: 2 (lower is better)
Translates to: QTHSMQDHGDGFHAEGQVEETGT*GRFHST
Trigger: TGTGGAGTGGAATCTTCCTCATGTACCTGTTTCCTC...CACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR TCA 90 bp ACTCAGAGAGCCAACAGCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATGGTGGGAGTTGAACAATaGGAACACATGGAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: TQRANSPGQITPGQCFHMVGVEQ*EHMEKG
Trigger: TCCCTTTTCCATGTGTTCTCATTGTTCAACTCCCAC...CATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGCTGTTGGCTCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CAA 90 bp TGTGGCTTTGGGTGGATCCAAAAACCAGTGTGGGCCTTGATTCCCTaGACTGCACAGTGGTATAACAATCCCTGCTTCCTCACAAGGCTC +
Preference number: 2 (lower is better)
Translates to: CGFGWIQKPVWALIP*TAQWYNNPCFLTRL
Trigger: GAGCCTTGTGAGGAAGCAGGGATTGTTATACCACTGTGCAGTCAAGGGAATCAAGGCCCACACTGGTTTTTGGATCCACCCAAAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR GCA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGTCTAGATCATCTGCATaGCATGTGAATCTTAAAACC +
Preference number: 2 (lower is better)
Translates to: STRPISCQEPLPDASTRGSRSSA*HVNLKT
Trigger: GGTTTTAAGATTCACATGGCATGCAGATGATCTAGA...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR TCA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAACTCATCCTGTGCTACTaGCATTCAGGTTCGAGAATG +
Preference number: 2 (lower is better)
Translates to: SASFLPHSMARLSRGLSKLILCY*HSGSRM
Trigger: CATTCTCGAACCTGAATGTCAGTAGCACAGGATGAG...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR CAA 90 bp CACAGCCAATATCATACTGAATGGGCAAAAACTAGAGGCATTCCCTaGGAAAACCAGCACAAGACAAGGATGCCCTCTCTCACCATTCCT +
Preference number: 2 (lower is better)
Translates to: HSQYHTEWAKTRGIP*ENQHKTRMPSLTIP
Trigger: AGGAATGGTGAGAGAGGGCATCCTTGTCTTGTGCTGGTTTTCCAAGGGAATGCCTCTAGTTTTTGCCCATTCAGTATGATATTGGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR GCA 90 bp GAATGGCAATCATTAAAAAGTGGCATGGTGGCCACAGATGCTGGAAAGGACAGGAGCATTTTCTGCTGCTaGTCTGTTCTTTCCCCATCT +
Preference number: 2 (lower is better)
Translates to: EWQSLKSGMVATDAGKDRSIFCC*SVLSPS
Trigger: AGATGGGGAAAGAACAGAGCAGCAGCAGAAAATGCT...CCTGTCCTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CAA 90 bp CAACAGGCACAGAGCAACAACATTCACCCAAATACCAGCTGCAATTaGTCCTTTAAGGATGCCTCACAAGGATATTATGTCCAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: QQAQSNNIHPNTSCN*SFKDASQGYYVQVA
Trigger: AGCTACCTGGACATAATATCCTTGTGAGGCATCCTTAAAGGACAAATTGCAGCTGGTATTTGGGTGAATGTTGTTGCTCTGTGCCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR TCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACGAGGAAACAGGTACATaGGGAAGATTCCACTCCACA +
Preference number: 2 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNEETGT*GRFHST
Trigger: TGTGGAGTGGAATCTTCCTCATGTACCTGTTTCCTC...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR GCA 90 bp CAGGTACATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTACTGGCCATGAATTATaGAAGACACACGGCAAAACA +
Preference number: 2 (lower is better)
Translates to: QVHEEDSTPQDTEPTSHPTGHEL*KTHGKT
Trigger: TGTTTTGCCGTGTGTCTTGCATAATTCATGGCCAGT...AGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATGTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630869.1
3UTR-3UTR CCA 90 bp GAATGGCAATCATTAAAAAGTGGCATGGTGGCCACAGATGCTGGAAAGGACAGGGCTAAGTGCAAACACTaGGACTATTTAAAGGTCACT +
Preference number: 2 (lower is better)
Translates to: EWQSLKSGMVATDAGKDRAKCKH*DYLKVT
Trigger: AGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGC...CCTGTCCTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CAA 90 bp CCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAATGTATaGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAA +
Preference number: 2 (lower is better)
Translates to: PTSHPVLLTFRFENV*LLPKVTLKCSNHKQ
Trigger: TTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR TCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGAGAGGCACCTGGGATGTaGAAGAATCCCACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGEAPGM*KNPTKA
Trigger: GGCTTTTGTGGGATTCTTTCACATCCCAGGTGCCTC...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR GCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACCTTCACAGCATCCCTTaGAAATGGTATGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNLHSIP*KWYEGK
Trigger: CTTTCCTTCATACCATTTGCAAGGGATGCTGTGAAG...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630869.1
3UTR CAA 90 bp ACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAATGTATTGTaGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACAC +
Preference number: 2 (lower is better)
Translates to: TSHPVLLTFRFENVL*LPKVTLKCSNHKQH
Trigger: GTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR CAA 90 bp CATTCACTACTAGTATGCTATACAGGTGACATCTTAAAAGGTACCTaGGCCTCATGTCCCACAAAGTCAATCCAGGCATTAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: HSLLVCYTGDILKGT*ASCPTKSIQALKRT
Trigger: TGTCCTTTTTAATGCCTGGATTGACTTTGTGGGACATGAGGCCAAGGTACCTTTTAAGATGTCACCTGTATAGCATACTAGTAGTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR GCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATTCACAAGCAACACATTaGTGCAAGATAAAAGGCACA +
Preference number: 2 (lower is better)
Translates to: CIVASKSNPQMFESQATHSQATH*CKIKGT
Trigger: TGTGCCTTTTATCTTGCAGCAATGTGTTGCTTGTGA...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR TCA 72 bp GGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCCTaGTGGGAGCTGTCTGAGCAAACTGGCCACAGGCCG +
Preference number: 3 (lower is better)
Translates to: GGRVMQKLPMVS*WELSEQTGHRP
Trigger: CGGCCTGTGGCCAGTTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp CAAGAACCCCTCCCTGACGCCTCCACTCGTGGGGTCTaGGATAGGCTCTTTACCTTCTCAGAGGATGGAGGC +
Preference number: 3 (lower is better)
Translates to: QEPLPDASTRGV*DRLFTFSEDGG
Trigger: GCCTCCATCCTCTGAGAAGGTAAAGAGCCTATCCCAGACCCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 72 bp CTATTTAAAGGTCACTGGGCAGGCGTGCCTACTTCCTaGTGGCTGCACAGCAGGGATCTGTCTTCCCACCCC +
Preference number: 3 (lower is better)
Translates to: LFKGHWAGVPTS*WLHSRDLSSHP
Trigger: GGGGTGGGAAGACAGATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCACGCCTGCCCAGTGACCTTTAAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp TTTAAAGGTCACTGGGCAGGCGTGCCTACTTCCTGCTaGCTGCACAGCAGGGATCTGTCTTCCCACCCCACT +
Preference number: 3 (lower is better)
Translates to: FKGHWAGVPTSC*LHSRDLSSHPT
Trigger: AGTGGGGTGGGAAGACAGATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCACGCCTGCCCAGTGACCTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp AGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATaGTGTCCTGATGGGAGCTGTCTGAGCAAACTGGCC +
Preference number: 3 (lower is better)
Translates to: RPWEAGSCKSCQ*CPDGSCLSKLA
Trigger: GGCCAGTTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 72 bp GCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTaGCAATGGTGTCCTGATGGGAGCTGTCTGAGCAAA +
Preference number: 3 (lower is better)
Translates to: AGRPWEAGSCKS*QWCPDGSCLSK
Trigger: TTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp AGGATGACTCTGGAGGTCCTGGAGGGCCAGGAATGCTaGCTGACAAGACAGGGCACTAATCGTAGTCAGGCA +
Preference number: 3 (lower is better)
Translates to: RMTLEVLEGQEC*LTRQGTNRSQA
Trigger: TGCCTGACTACGATTAGTGCCCTGTCTTGTCAGCCAGCATTCCTGGCCCTCCAGGACCTCCAGAGTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 72 bp CAGAGGTTCCCAACCTACAGGCCATGGACAGGTCCATaGCCTGTTAGGAACCAGCTGCACAGCAGGAGAGTT +
Preference number: 3 (lower is better)
Translates to: QRFPTYRPWTGP*PVRNQLHSRRV
Trigger: AACTCTCCTGCTGTGCAGCTGGTTCCTAACAGGTCATGGACCTGTCCATGGCCTGTAGGTTGGGAACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp TCCCCAGTGTCCCCAGCACAGGCTAAGTGCAAACACTaGGACTATTTAAAGGTCACTGGGCAGGCGTGCCTA +
Preference number: 3 (lower is better)
Translates to: SPVSPAQAKCKH*DYLKVTGQACL
Trigger: TAGGCACGCCTGCCCAGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGCCTGTGCTGGGGACACTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp CCACAAGAAAGGGGACAACCAGCAGGCCACTTCCTTTaGTTTAGCAGTGACAGAGGAGGAGCCCTAGTGGAC +
Preference number: 3 (lower is better)
Translates to: PQERGQPAGHFL*FSSDRGGALVD
Trigger: GTCCACTAGGGCTCCTCCTCTGTCACTGCTAAACCAAAGGAAGTGGCCTGCTGGTTGTCCCCTTTCTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp AGCAATTCTTGTGCCTCAGCCTCCCTCCCAAGTAGCTaGGATTATAGGCGCACACCAGCTAGCCTGGCTGAT +
Preference number: 3 (lower is better)
Translates to: SNSCASASLPSS*DYRRTPASLAD
Trigger: ATCAGCCAGGCTAGCTGGTGTGCGCCTATAATCCCAGCTACTTGGGAGGGAGGCTGAGGCACAAGAATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp CTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGCCACCTGGGAATCACTaGCACCCAAGGCTTATGTGC +
Preference number: 3 (lower is better)
Translates to: LLFYLTPWPGSPGACLKQPPGNH*HPRLMC
Trigger: GCACATAAGCCTTGGGTGCAAGTGATTCCCAGGTGG...CTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR CAA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGATGCCCTTCGACAGGTaGAGGAAATTCTCTTGTATC +
Preference number: 3 (lower is better)
Translates to: STRPISCQEPLPDASTRGMPFDR*RKFSCI
Trigger: GATACAAGAGAATTTCCTCAACCTGTCGAAGGGCAT...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 72 bp GGGAGCTGTCTGAGCAAACTGGCCACAGGCCGTGAGTaGAAGCAAAGCAGAAGCCTTTCTACAAGACCCATC +
Preference number: 3 (lower is better)
Translates to: GSCLSKLATGRE*KQSRSLSTRPI
Trigger: GATGGGTCTTGTAGAAAGGCTTCTGCTTTGCTTTCACTCACGGCCTGTGGCCAGTTTGCTCAGACAGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 72 bp GCAAAAGCTGCCAATGGTGTCCTGATGGGAGCTGTCTaGGCAAACTGGCCACAGGCCGTGAGTGAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: AKAANGVLMGAV*ANWPQAVSESK
Trigger: TTTGCTTTCACTCACGGCCTGTGGCCAGTTTGCTCAGACAGCTCCCATCAGGACACCATTGGCAGCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 72 bp AAACACTGGGACTATTTAAAGGTCACTGGGCAGGCGTaGCTACTTCCTGCTGGCTGCACAGCAGGGATCTGT +
Preference number: 3 (lower is better)
Translates to: KHWDYLKVTGQA*LLPAGCTAGIC
Trigger: ACAGATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCACGCCTGCCCAGTGACCTTTAAATAGTCCCAGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp GCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATaGCTGGCTGAGCACCATATTCCAATCTGCAAAAGA +
Preference number: 3 (lower is better)
Translates to: AQGRSRQDSASI*LAEHHIPICKR
Trigger: TCTTTTGCAGATTGGAATATGGTGCTCAGCCAGCCATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp GAATGGCAATCATTAAAAAGTGGCATGGTGGCCACAGATGCTGGAAAGGACAGGGCCCTAGTGGACCAGTaGGCCCTGTGCAAAGAACAG +
Preference number: 3 (lower is better)
Translates to: EWQSLKSGMVATDAGKDRALVDQ*ALCKEQ
Trigger: CTGTTCTTTGCACAGGGCCAACTGGTCCACTAGGGC...CCTGTCCTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGTCTCATCTTCCAAAGTaGTCAGTTATTTCTGGGATT +
Preference number: 3 (lower is better)
Translates to: STRPISCQEPLPDASTRGSHLPK*SVISGI
Trigger: AATCCCAGAAATAACTGACAACTTTGGAAGATGAGA...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 72 bp TGCAGTTTATCCCCAGTGTCCCCAGCACAGGCTAAGTaGAAACACTGGGACTATTTAAAGGTCACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: CSLSPVSPAQAK*KHWDYLKVTGQ
Trigger: CTGCCCAGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGCCTGTGCTGGGGACACTGGGGATAAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp AAACCAGTGTGGGCCTTGATTCCCTTGACTGCACAGTaGTATAACAATCCCTGCTTCCTCACAAGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: KPVWALIPLTAQ*YNNPCFLTRLS
Trigger: GGAGAGCCTTGTGAGGAAGCAGGGATTGTTATACCACTGTGCAGTCAAGGGAATCAAGGCCCACACTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp CCAGCTGCACAGCAGGAGAGTTACTGTGGATCTTCTAGATCATCTGCATGCCATTGGGCCTTGATTCCCTaGACTGCACAGTGGTATAAC +
Preference number: 3 (lower is better)
Translates to: PAAQQESYCGSSRSSACHWALIP*TAQWYN
Trigger: GTTATACCACTGTGCAGTCAAGGGAATCAAGGCCCA...ATGGCATGCAGATGATCTAGAAGATCCACAGTAACTCTCCTGCTGTGCAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTTTCGAGAATGTATTGTaGCTTCCAAAAGTAACCCTC +
Preference number: 3 (lower is better)
Translates to: TVAPVISDGAAFCHLGITFENVL*LPKVTL
Trigger: GAGGGTTACTTTTGGAAGCAACAATACATTCTCGAA...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR-3UTR CAA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAAAGGCTTATGTGCTGTaGCTGAATAGGTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: SASFLPHSMARLSRGLSKKAYVL*LNRFVF
Trigger: GAATACAAACCTATTCAGCAACAGCACATAAGCCTT...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR TCA 72 bp TTTCATGATTTTATTTCTTGCTCCCTGAGCCTGCAGTaGTTAGGGTGGAAGGGAAGTGGCACTCAGGCAGAT +
Preference number: 3 (lower is better)
Translates to: FHDFISCSLSLQ*LGWKGSGTQAD
Trigger: ATCTGCCTGAGTGCCACTTCCCTTCCACCCTAATCACTGCAGGCTCAGGGAGCAAGAAATAAAATCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp ACCACTGAGATAATCAACCCAGTGAAAATGCTACACTaGGGACCATGTTTTGCCCTTCCCAGACAAGACATC +
Preference number: 3 (lower is better)
Translates to: TTEIINPVKMLH*GPCFALPRQDI
Trigger: GATGTCTTGTCTGGGAAGGGCAAAACATGGTCCCCAGTGTAGCATTTTCACTGGGTTGATTATCTCAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR GCA 72 bp GCTTCCATATGGCTGGCTGAGCACCATATTCCAATCTaGAAAAGAGTCACCTTATTGGTTCCCTTAACTTCC +
Preference number: 3 (lower is better)
Translates to: ASIWLAEHHIPI*KRVTLLVPLTS
Trigger: GGAAGTTAAGGGAACCAATAAGGTGACTCTTTTGCAGATTGGAATATGGTGCTCAGCCAGCCATATGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp ATCATACTGAATGGGCAAAAACTAGAGGCATTCCCTTaGAAAACCAGCACAAGACAAGGATGCCCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: IILNGQKLEAFP*KTSTRQGCPLS
Trigger: TGAGAGAGGGCATCCTTGTCTTGTGCTGGTTTTCCAAGGGAATGCCTCTAGTTTTTGCCCATTCAGTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CCA 72 bp AAACCACCATCAGATGCCATCTCATGCCAGTTAGAATaGCAATCATTAAAAAGTGGCATGGTGGCCACAGAT +
Preference number: 3 (lower is better)
Translates to: KPPSDAISCQLE*QSLKSGMVATD
Trigger: ATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTCTAACTGGCATGAGATGGCATCTGATGGTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 72 bp CACAAGATACAGAACCCACTTCTCATCCTGTGCTACTaGCATTCAGGTTCGAGAATGTATTGTTGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: HKIQNPLLILCY*HSGSRMYCCFQ
Trigger: TTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR TCA 72 bp TCAAAGCCTACATTCACTACTAGTATGCTATACAGGTaGCATCTTAAAAGGTACCTTGGCCTCATGTCCCAC +
Preference number: 3 (lower is better)
Translates to: SKPTFTTSMLYR*HLKRYLGLMSH
Trigger: GTGGGACATGAGGCCAAGGTACCTTTTAAGATGTCACCTGTATAGCATACTAGTAGTGAATGTAGGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR TCA 72 bp AGGATGGAGGCAATACCATTCACTGGGCAGTCACTGTaGATATTGAATGAGATAAAACATGGCAGTGTCTAC +
Preference number: 3 (lower is better)
Translates to: RMEAIPFTGQSL*ILNEIKHGSVY
Trigger: GTAGACACTGCCATGTTTTATCTCATTCAATATTCACAGTGACTGCCCAGTGAATGGTATTGCCTCCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAAGGTTCGAGAATGTATaGTTGCTTCCAAAAGTAACC +
Preference number: 3 (lower is better)
Translates to: TRYRTHFSSCATDIQVRERFENV*LLPKVT
Trigger: GGTTACTTTTGGAAGCAACAATACATTCTCGAACCT...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR GCA 72 bp AATTCTTTACTCACTCATCAGGTTGCTTTTAATCACTaGTGTTGCTTGGTAACAGGTTTCAGCAGATTTGAA +
Preference number: 3 (lower is better)
Translates to: NSLLTHQVAFNH*CCLVTGFSRFE
Trigger: TTCAAATCTGCTGAAACCTGTTACCAAGCAACAGCAGTGATTAAAAGCAACCTGATGAGTGAGTAAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR-3UTR CAA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGAAGGTTCGAGAATGTATaGTTGCTTCCAAAAGTAACC +
Preference number: 3 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGRFENV*LLPKVT
Trigger: GGTTACTTTTGGAAGCAACAATACATTCTCGAACCT...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCCAAGAACCCCTCCCTaGCGCCTCCACTCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VLLFYLTPWPGSPGACLKPRTPP*RLHSWG
Trigger: ACCCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGG...CTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCCAGAGATCACGCCACTaGACTCCAGCCTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVQRSRH*TPAWAT
Trigger: CGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCTG...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGGTGGGCGGATTACCTaGGGTCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: QTHSMQDHGDGFHAEGQVGGRIT*GQEFQT
Trigger: GGTCTGGAACTCCTGACCTCAGGTAATCCGCCCACC...CACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTTGTTCTCAGATGCCCTGATGGGAGCTGTCTaGGCAAACTGGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: WPGSPGACLKQSHLFSDALMGAV*ANWPQA
Trigger: GGCCTGTGGCCAGTTTGCTCAGACAGCTCCCATCAG...GGCATCTGAGAACAAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCGACAAGAGACGGGAGTaGGTTAGTACACAGCACGCC +
Preference number: 4 (lower is better)
Translates to: DHGDGFHAEGQVDPKTLSDKRRE*VSTQHA
Trigger: GGCGTGCTGTGTACTAACTCACTCCCGTCTCTTGTC...GGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGAACGCAGGAAGACCCTaGGAGGCAGGGTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLNAGRP*EAGSCK
Trigger: TTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTT...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGCTCATCCTGTGCTACTaGCATTCAGGTTCGAGAATG +
Preference number: 4 (lower is better)
Translates to: STRPISCQEPLPDASTRGLILCY*HSGSRM
Trigger: CATTCTCGAACCTGAATGTCAGTAGCACAGGATGAG...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGTGCTCCCGTGATCTCTaGTGGGGCTGCCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SRSRLTLCRTTVMASMLRCSRDL*WGCLLP
Trigger: TGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCA...CCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGAGGCAGAGGTTGCAGTaGGCTGAGATCATGCCACCG +
Preference number: 4 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVRQRLQ*AEIMPP
Trigger: CGGTGGCATGATCTCAGCTCACTGCAACCTCTGCCT...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAACTTCAGCTTGTCCATTaGGGCCCAGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SASFLPHSMARLSRGLSKLQLVH*GPVPTS
Trigger: GCTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAG...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGTGGTATAACAATCCCTaGTTCCTCACAAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: STRPISCQEPLPDASTRGWYNNP*FLTRLS
Trigger: GGAGAGCCTTGTGAGGAAGCAGGGATTGTTATACCA...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTGGGAGGCAGGGTCATaGAAAAGCTGCCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLWEAGS*KSCQWC
Trigger: ACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCA...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGCTGCCTTTTGCCACCTaGGAATCACTTGCACCCAAG +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLLPFAT*ESLAPK
Trigger: CTTGGGTGCAAGTGATTCCCAGGTGGCAAAAGGCAG...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGAGCTTCCAAAAGAGATaGGCAGGGAGGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVSFQKR*AGRARE
Trigger: CTCCCTGGCCCTCCCTGCCCATCTCTTTTGGAAGCT...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGTTACTGTTGCTCCCGTaGTCTCTGATGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLFYLTPWPGSPGACLKQLLLLP*SLMGLP
Trigger: AGGCAGCCCCATCAGAGATCACGGGAGCAACAGTAA...CTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp GTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGACACCACAGCCCTTCTaGGATCTGTCTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLLFYLTPWPGSPGACLKTPQPF*DLSPRG
Trigger: GCCTCTTGGAGACAGATCTCAGAAGGGCTGTGGTGT...CTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGCCACAGGCCGTGAGTaGAAGCAAAGCAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ASFLPHSMARLSRGLSKAATGRE*KQSRSL
Trigger: AAGGCTTCTGCTTTGCTTTCACTCACGGCCTGTGGC...TGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGTCCTTCACCCAGCAGTaGACGGAAGGGAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: SRSRLTLCRTTVMASMLRSFTQQ*TEGKGM
Trigger: CATTCCCTTCCCTTCCGTTCACTGCTGGGTGAAGGA...CCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCAGCAGACTCACTCTATaGAGGACCACGGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVSRLTL*RTTVMA
Trigger: AGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCT...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGCGTTTGAGCCCTTTCTaGAAAAGGGGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: STRPISCQEPLPDASTRGRLSPF*KRGCIS
Trigger: TGAAATGCATCCCCTTTTGCAGAAAGGGCTCAAACG...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTATGCTGAGGGACAAGTaGACCCCAAAACTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TVAPVISDGAAFCHLGITMLRDK*TPKLCP
Trigger: GGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCAT...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCTTTGGGAGGTCAAGGTaGGCGGATTACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVFGRSR*ADYLRS
Trigger: TGACCTCAGGTAATCCGCCCACCTTGACCTCCCAAA...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGGGTGGCCACAGATGCTaGAAAGGACAGGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLGGHRC*KGQGEI
Trigger: TATTTCTCCCTGTCCTTTCCAGCATCTGTGGCCACC...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTTCCACTCGTGGGGTCTaGGATAGGCTCTTTACCTTC +
Preference number: 4 (lower is better)
Translates to: TVAPVISDGAAFCHLGITSTRGV*DRLFTF
Trigger: GAAGGTAAAGAGCCTATCCCAGACCCCACGAGTGGA...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCGTTTCACTGGTCCCATaGGGAAGATGGTACTCCCAA +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVVSLVP*GRWYSQ
Trigger: TTGGGAGTACCATCTTCCTCATGGGACCAGTGAAAC...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACTCTGTCCCTTACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCCCTTGCAAATGGTATaGAGGAAAGGCTGTACCACG +
Preference number: 4 (lower is better)
Translates to: TLSLTVAPVISDGAAFCHPLQMV*RKGCTT
Trigger: CGTGGTACAGCCTTTCCTTCATACCATTTGCAAGGG...GTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGTAAGGGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTATTTCCTTTCCTGGCTaGGGACAGGTTAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: TVAPVISDGAAFCHLGITISFPG*GQVSDL
Trigger: CAGGTCACTAACCTGTCCTCAGCCAGGAAAGGAAAT...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAACTGCCAATGGTGTCCTaGTGGGAGCTGTCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SASFLPHSMARLSRGLSKLPMVS*WELSEQ
Trigger: TTGCTCAGACAGCTCCCATCAGGACACCATTGGCAG...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGCAGACTCACTCTATaGAGGACCACGGTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLFYLTPWPGSPGACLKQSRLTL*RTTVMA
Trigger: AGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCT...CTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp AGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGGGTCATGCAAAAGCTaGCAATGGTGTCCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SRSRLTLCRTTVMASMLRGSCKS*QWCPDG
Trigger: CCCATCAGGACACCATTGGCAGCTTTTGCATGACCC...CCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAAGCAGGCCACTTCCTTTaGTTTAGCAGTGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKAGHFL*FSSDRG
Trigger: TCCTCTGTCACTGCTAAACCAAAGGAAGTGGCCTGC...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGAAAAGGACATGGACATaGAGGGATGAGCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLKRTWT*RDEPSR
Trigger: CCTAGAAGGCTCATCCCTCCATGTCCATGTCCTTTT...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTTGTTCTCAGATGCCAACAGTACCCAGCAGTaGGCAGAGAATTCCTATAGC +
Preference number: 4 (lower is better)
Translates to: WPGSPGACLKQSHLFSDANSTQQ*AENSYS
Trigger: GCTATAGGAATTCTCTGCTCACTGCTGGGTACTGTT...GGCATCTGAGAACAAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp TTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACCTCATCCTGTGCTACTaGCATTCAGGTTCGAGAATG +
Preference number: 4 (lower is better)
Translates to: FYLTPWPGSPGACLKQSHLILCY*HSGSRM
Trigger: CATTCTCGAACCTGAATGTCAGTAGCACAGGATGAG...GTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAATGCCCTTCGACAGGTTaGGGAAATTCTCTTGTATCC +
Preference number: 4 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKCPSTG*GNSLVS
Trigger: GGATACAAGAGAATTTCCTCAACCTGTCGAAGGGCA...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCACAGCCAGATGCATCTaGCTTCAAAGCCTACATTCA +
Preference number: 4 (lower is better)
Translates to: DHGDGFHAEGQVDPKTLSTARCI*LQSLHS
Trigger: TGAATGTAGGCTTTGAAGTCAGATGCATCTGGCTGT...GGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCAGCAGCATTTTCTGCTaGTGCTCTGTTCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVSSIFC*CSVLSP
Trigger: TGGGGAAAGAACAGAGCAGCAGCAGAAAATGCTGCT...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAGTCACTGGGCAGGCGTaGCTACTTCCTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVREVTGQA*LLPAGC
Trigger: GCAGCCAGCAGGAAGTAGGCACGCCTGCCCAGTGAC...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTAGCACAAGACAAGGATaGCCTCTCTCACCATTCCTA +
Preference number: 4 (lower is better)
Translates to: HGDGFHAEGQVDPKTLSLSTRQG*PLSPFL
Trigger: TAGGAATGGTGAGAGAGGGCATCCTTGTCTTGTGCT...AAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGTCTCCAAGAGGCACCTaGGATGTGAAAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVSPRGT*DVKESH
Trigger: GTGGGATTCTTTCACATCCCAGGTGCCTCTTGGAGA...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp GCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGTAGTCCCAGTTTCTTaGGAGGCTGAGGCACAAGAA +
Preference number: 4 (lower is better)
Translates to: ASFLPHSMARLSRGLSKAVVPVS*EAEAQE
Trigger: TTCTTGTGCCTCAGCCTCCCAAGAAACTGGGACTAC...TGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp GTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGTGCAAAAGCTGCCAATaGTGTCCTGATGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLLFYLTPWPGSPGACLKCKSCQ*CPDGSC
Trigger: ACAGCTCCCATCAGGACACCATTGGCAGCTTTTGCA...CTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CAGGTACATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTTGCTCCCGTGATCTCTaGTGGGGCTGCCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QVHEEDSTPQDTEPTSHPCSRDL*WGCLLP
Trigger: TGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCA...AGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGCAGCCAACAAACATATaGAAAAATGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: STRPISCQEPLPDASTRGQPTNI*KNAHHH
Trigger: GTGATGATGAGCATTTTTTCATATGTTTGTTGGCTG...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CCAGCTGCACAGCAGGAGAGTTACTGTGGATCTTCTAGATCATCTGCATGCCATACTGAAGGCTCCGTTTaGGCCCTTTCTGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PAAQQESYCGSSRSSACHTEGSV*ALSAKG
Trigger: CCCTTTTGCAGAAAGGGCTCAAACGGAGCCTTCAGT...ATGGCATGCAGATGATCTAGAAGATCCACAGTAACTCTCCTGCTGTGCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTAGCAGAGGAGCAGAACTaGAGGCTCCGTTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HEEDSTPQDTEPTSHPVLAEEQN*RLRLSP
Trigger: AGGGCTCAAACGGAGCCTTCAGTTCTGCTCCTCTGC...TAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACACAAGGGTGATAGATaGTCCACCACTGAGATAATC +
Preference number: 4 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKHKGDR*STTEII
Trigger: GATTATCTCAGTGGTGGATCATCTATCACCCTTGTG...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTGCTGTACCACGTCAATaGCAAAGACTGCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: HGDGFHAEGQVDPKTLSLAVPRQ*QRLQNA
Trigger: TGCATTTTGCAGTCTTTGGCATTGACGTGGTACAGC...AAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAGGCGTGCCTACTTCCTaGTGGCTGCACAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVREGVPTS*WLHSRD
Trigger: ATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCACGCC...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCCCAGCACAGGCTAAGTaGAAACACTGGGACTATTTA +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVPAQAK*KHWDYL
Trigger: TAAATAGTCCCAGTGTTTGCACTTAGCCTGTGCTGG...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp AGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGGCAATCATTAAAAAGTaGCATGGTGGCCACAGATGC +
Preference number: 4 (lower is better)
Translates to: RLTLCRTTVMASMLRDKWAIIKK*HGGHRC
Trigger: GCATCTGTGGCCACCATGCCACTTTTTAATGATTGC...CCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTTGTTCTCAGATGCCCTAGAGGCATTCCCTTaGAAAACCAGCACAAGACAA +
Preference number: 4 (lower is better)
Translates to: WPGSPGACLKQSHLFSDALEAFP*KTSTRQ
Trigger: TTGTCTTGTGCTGGTTTTCCAAGGGAATGCCTCTAG...GGCATCTGAGAACAAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGGTGCTTCCATATGGCTaGCTGAGCACCATATTCCAA +
Preference number: 4 (lower is better)
Translates to: LLFYLTPWPGSPGACLKQVLPYG*LSTIFQ
Trigger: TTGGAATATGGTGCTCAGCCAGCCATATGGAAGCAC...CTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp AGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAGTGCTTCCATATaGCTGGCTGAGCACCATATT +
Preference number: 4 (lower is better)
Translates to: SRSRLTLCRTTVMASMLRDSASI*LAEHHI
Trigger: AATATGGTGCTCAGCCAGCCATATGGAAGCACTGTC...CCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTTCCTTACTGTTGCTCCCGTaGTCTCTGATGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFEDSYKTVHQLLSIVPSLLLLP*SLMGLP
Trigger: AGGCAGCCCCATCAGAGATCACGGGAGCAACAGTAA...GGAAGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp TTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGTGCTGGAGCTCACAGTaGCTAGCCAAGCCTCGTATC +
Preference number: 4 (lower is better)
Translates to: FHSTRYRTHFSSCATDIQCWSSQ*LAKPRI
Trigger: GATACGAGGCTTGGCTAGTCACTGTGAGCTCCAGCA...CTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACTCTGTCCCTTACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACTTAGTTCAACCATTGTaGAAGACAGTGTGGCGATTC +
Preference number: 4 (lower is better)
Translates to: TLSLTVAPVISDGAAFCHLVQPL*KTVWRF
Trigger: GAATCGCCACACTGTCTTTCACAATGGTTGAACTAA...GTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGTAAGGGACAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTACAGCACCATGATAGTTaGAATCAAACGAGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVMASMLRDKWTPKLCPLQHHDS*NQTSRL
Trigger: GAGCCTACTCGTTTGATTGCAACTATCATGGTGCTG...TAAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTAGAACACAGGGTAAGTaGAAAACACAACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: TVAPVISDGAAFCHLGITRTQGK*KTQQHH
Trigger: ATGGTGCTGTTGTGTTTTGCACTTACCCTGTGTTCT...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCCTTCACAGCATCCCTTaGAAATGGTATGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVLHSIP*KWYEGK
Trigger: CTTTCCTTCATACCATTTGCAAGGGATGCTGTGAAG...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTACTGGCCATGAATTATaGAAGACACACGGCAAAACA +
Preference number: 4 (lower is better)
Translates to: TVAPVISDGAAFCHLGITTGHEL*KTHGKT
Trigger: TGTTTTGCCGTGTGTCTTGCATAATTCATGGCCAGT...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGGTTGCTTTTAATCACTaGTGTTGCTTGGTAACAGGT +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLVAFNH*CCLVTG
Trigger: ACCTGTTACCAAGCAACAGCAGTGATTAAAAGCAAC...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CCAGCTGCACAGCAGGAGAGTTACTGTGGATCTTCTAGATCATCTGCATGCCATTCTGAGCTACGGCTATaGAGAGGAGCAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: PAAQQESYCGSSRSSACHSELRL*RGAELK
Trigger: CTTCAGTTCTGCTCCTCTGCATAGCCGTAGCTCAGA...ATGGCATGCAGATGATCTAGAAGATCCACAGTAACTCTCCTGCTGTGCAGCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp AGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGCTGCTTGGCTTTGGATaGGGACTGCATTATATCTAT +
Preference number: 4 (lower is better)
Translates to: RLTLCRTTVMASMLRDKWLLGFG*GLHYIY
Trigger: ATAGATATAATGCAGTCCCCATCCAAAGCCAAGCAG...CCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAAGGCAATACCATTCACTaGGCAGTCACTGTGAATATT +
Preference number: 4 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKGNTIH*AVTVNI
Trigger: AATATTCACAGTGACTGCCCAGTGAATGGTATTGCC...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGACCATAGCTCTCCCTTaGGAGATTACACAAATACAA +
Preference number: 4 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLTIALP*EITQIQ
Trigger: TTGTATTTGTGTAATCTCCCAAGGGAGAGCTATGGT...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACGGTCATGAAGGAGGCTaGAGCTGTGGCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNGHEGG*SCGFGW
Trigger: CCACCCAAAGCCACAGCTTCAGCCTCCTTCATGACC...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTGCCAGGAATGCTGGCTaGCAAGACAGGGCACTAATC +
Preference number: 4 (lower is better)
Translates to: RGFEDSYKTVHQLLSIVPARNAG*QDRALI
Trigger: GATTAGTGCCCTGTCTTGTCAGCCAGCATTCCTGGC...AGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAAAAACTATCATCAGAGTaGACAGGCAACCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKKLSSE*TGNLQN
Trigger: ATTCTGTAGGTTGCCTGTTCACTCTGATGATAGTTT...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAACTGACATCTTGCAATaGCCCAGCAGGAACTGTTAT +
Preference number: 4 (lower is better)
Translates to: SASFLPHSMARLSRGLSKTDILQ*PSRNCY
Trigger: ATAACAGTTCCTGCTGGGTCATTGCAAGATGTCAGT...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAACTGGCCACAGGCCGTaGGTGAAAGCAAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVRETGHRP*VKAKQK
Trigger: CTTCTGCTTTGCTTTCACTCACGGCCTGTGGCCAGT...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TGTGCTACTGACATTCAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCTTCAGCTTGTCCATTaGGGCCCAGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: CATDIQVRECIVASKSNPLQLVH*GPVPTS
Trigger: GCTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAG...AGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp TGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTTGTTCTCAGATGCCAATGCAGAAGATAAGTaGAAGTCCCTTGTTATGCCA +
Preference number: 4 (lower is better)
Translates to: WPGSPGACLKQSHLFSDANAEDK*KSLVMP
Trigger: TGGCATAACAAGGGACTTGCACTTATCTTCTGCATT...GGCATCTGAGAACAAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp TTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTCACAAGCAACACATTaGTGCAAGATAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: FYLTPWPGSPGACLKQSHSQATH*CKIKGT
Trigger: TGTGCCTTTTATCTTGCAGCAATGTGTTGCTTGTGA...GTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAAGCATTTTCTGCTGCTaGTCTGTTCTTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: SASFLPHSMARLSRGLSKSIFCC*SVLSPS
Trigger: AGATGGGGAAAGAACAGAGCAGCAGCAGAAAATGCT...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp GACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCTGGGAACAAGAACTCTaGAGTTTGAGATTTCTGATA +
Preference number: 4 (lower is better)
Translates to: DHGDGFHAEGQVDPKTLSWEQEL*SLRFLI
Trigger: TATCAGAAATCTCAAACTGCAGAGTTCTTGTTCCCA...GGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACATGGTGGCCACAGATaGTGGAAAGGACAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: HEEDSTPQDTEPTSHPVLHGGHR*WKGQGE
Trigger: TTCTCCCTGTCCTTTCCAGCATCTGTGGCCACCATG...TAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp GAATGGCAATCATTAAAAAGTGGCATGGTGGCCACAGATGCTGGAAAGGACAGGTTCAAGCAATTCTTGTaGCTCAGCCTCCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: EWQSLKSGMVATDAGKDRFKQFL*LSLPPK
Trigger: CTTGGGAGGGAGGCTGAGGCACAAGAATTGCTTGAA...CCTGTCCTTTCCAGCATCTGTGGCCACCATGCCACTTTTTAATGATTGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGCTGCCTTTTGCCACCTaGGAATCACTTGCACCCAAG +
Preference number: 4 (lower is better)
Translates to: FHSTRYRTHFSSCATDIQLPFAT*ESLAPK
Trigger: CTTGGGTGCAAGTGATTCCCAGGTGGCAAAAGGCAG...CTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp CATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTAATGCTGAGGGACAAGTaGACCCCAAAACTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HEEDSTPQDTEPTSHPVLMLRDK*TPKLCP
Trigger: GGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCAT...TAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp ATTATGCAAGACACACGGCAAAACACTTCTTCACAGCATCCCTTGCAAATGGTATTCTACCTCACTCCATaGCCAGGCTCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IMQDTRQNTSSQHPLQMVFYLTP*PGSPGA
Trigger: AGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAA...TACCATTTGCAAGGGATGCTGTGAAGAAGTGTTTTGCCGTGTGTCTTGCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630869.1
CDS-3UTR CCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAACTAGCTCCTCTCTCTaGCCCCGTCAGGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVRETSSSL*PRQACS
Trigger: TGAACAAGCCTGACGGGGCCAGAGAGAGGAGCTAGT...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp AGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGCAGCAATCTCATTACTaGGTATATACCCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RLTLCRTTVMASMLRDKWQQSHY*VYTQRV
Trigger: AACCCTTTGGGTATATACCCAGTAATGAGATTGCTG...CCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp AGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGAGAGAAAATAAAGCCTaGCGTAGACAGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: SRSRLTLCRTTVMASMLRRENKA*RRQSHR
Trigger: TCTATGGGACTGTCTACGCCAGGCTTTATTTTCTCT...CCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAGAACACAAGGGACAGTaGACATCCTGCAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVREEHKGQ*TSCRSR
Trigger: CCTGGATCTGCAGGATGTTCACTGTCCCTTGTGTTC...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGGCAACAAGGAGGAGCTaGAAGGGAACACAAGGGACA +
Preference number: 4 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVATRRS*KGTQGT
Trigger: TGTCCCTTGTGTTCCCTTTCAGCTCCTCCTTGTTGC...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGAGAAGTGGTAAGAGTTaGCATCTCTGTCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVRSGKS*HLCLIL
Trigger: GAGAATAAGACAGAGATGTCAACTCTTACCACTTCT...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTATCAACAAAAACAGGGTaGCGTCCTAAACAATCAACA +
Preference number: 4 (lower is better)
Translates to: TVMASMLRDKWTPKLCPLSTKTG*RPKQST
Trigger: TGTTGATTGTTTAGGACGTCACCCTGTTTTTGTTGA...TAAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACAGTATGCTATACAGGTaGCATCTTAAAAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: FYLTPWPGSPGACLKQSHSMLYR*HLKRYL
Trigger: AAGGTACCTTTTAAGATGTCACCTGTATAGCATACT...GTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACTCCCTGAGCCTGCAGTaGTTAGGGTGGAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNSLSLQ*LGWKGS
Trigger: ACTTCCCTTCCACCCTAATCACTGCAGGCTCAGGGA...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACTCAGAGAGCCAACAGCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATGATCAATTATATATCCTaGTGTGTTGCGAAACTCACT +
Preference number: 4 (lower is better)
Translates to: TQRANSPGQITPGQCFHMINYIS*CVAKLT
Trigger: AGTGAGTTTCGCAACACAGCAGGATATATAATTGAT...CATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGCTGTTGGCTCTCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACCTGGGAATCACTTCTAGATCATCTGCATaGCATGTGAATCTTAAAACC +
Preference number: 4 (lower is better)
Translates to: TVAPVISDGAAFCHLGITSRSSA*HVNLKT
Trigger: GGTTTTAAGATTCACATGGCATGCAGATGATCTAGA...AGTGATTCCCAGGTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACACAAGACCCATCTCCTaGCAAGAACCCCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNTRPIS*QEPLPD
Trigger: GTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGT...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGTGCTACTGACATTCAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTGGTGTAGTCCCTTCCTaGGCACCCACAGCAGAACAG +
Preference number: 4 (lower is better)
Translates to: CATDIQVRECIVASKSNPGVVPS*APTAEQ
Trigger: CTGTTCTGCTGTGGGTGCCCAGGAAGGGACTACACC...AGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp CAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGATAGGTTTGTATTCATaGGAATTCAGTGGGACAACA +
Preference number: 4 (lower is better)
Translates to: QTHSMQDHGDGFHAEGQVIGLYS*EFSGTT
Trigger: TGTTGTCCCACTGAATTCCCATGAATACAAACCTAT...CACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAATCATGCCAGTTAGAATaGCAATCATTAAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKSCQLE*QSLKSG
Trigger: GCCACTTTTTAATGATTGCCATTCTAACTGGCATGA...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp GGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTTCCAGAATCCATAGCCACTaGGCTGCCCTTCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: GFEDSYKTVHQLLSIVPSRIHSH*AALQFP
Trigger: GGGAAATTGAAGGGCAGCCCAGTGGCTATGGATTCT...GGAAGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTTCCGAGGAAACAGGTACATaGGGAAGATTCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: GFEDSYKTVHQLLSIVPSEETGT*GRFHST
Trigger: TGTGGAGTGGAATCTTCCTCATGTACCTGTTTCCTC...GGAAGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp TTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGAGTGACCTGAGCAGATaGCTGGATGTCATCAATAGC +
Preference number: 4 (lower is better)
Translates to: FHSTRYRTHFSSCATDIQSDLSR*LDVINS
Trigger: GCTATTGATGACATCCAGTCATCTGCTCAGGTCACT...CTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGATTTACTCGCTGCAATaGAAACTGGTAAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: STPQDTEPTSHPVLLTFRIYSLQ*KLVSQG
Trigger: CCCTTGGCTTACCAGTTTTCATTGCAGCGAGTAAAT...CCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTATATACCACCAAAAAGTaGTTCTTTTCTACCTCACTC +
Preference number: 4 (lower is better)
Translates to: TVMASMLRDKWTPKLCPLYTTKK*FFSTSL
Trigger: GAGTGAGGTAGAAAAGAAGCACTTTTTGGTGGTATA...TAAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp GTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGTGGTCATTAGGGAAATaGAAATCAAAACCACCATCA +
Preference number: 4 (lower is better)
Translates to: VLLFYLTPWPGSPGACLKWSLGK*KSKPPS
Trigger: TGATGGTGGTTTTGATTTGCATTTCCCTAATGACCA...CTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTCATTCACTACTAGTATaGTATACAGGTGACATCTTA +
Preference number: 4 (lower is better)
Translates to: HGDGFHAEGQVDPKTLSLHSLLV*YTGDIL
Trigger: TAAGATGTCACCTGTATAGCATACTAGTAGTGAATG...AAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCATTCTACCTCACTCCATaGCCAGGCTCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESFYLTP*PGSPGA
Trigger: AGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAA...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCAGTGCCTACTTCCTGCTaGCTGCACAGCAGGGATCTG +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESVPTSC*LHSRDL
Trigger: CAGATCCCTGCTGTGCAGCCAGCAGGAAGTAGGCAC...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATTTAGCACGGGCGTGGTaGCGGGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: CIVASKSNPQMFESQATHLARAW*RAPVIP
Trigger: TGGGATTACAGGTGCCCGCCACCACGCCCGTGCTAA...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp AAAACGCAGGAAGACCCTGGGAGGCAGGGTCATGCAAAAGCTGCCAATGGTGTCCAATATCATACTGAATaGGCAAAAACTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: KTQEDPGRQGHAKAANGVQYHTE*AKTRGI
Trigger: AATGCCTCTAGTTTTTGCCCATTCAGTATGATATTG...GACACCATTGGCAGCTTTTGCATGACCCTGCCTCCCAGGGTCTTCCTGCGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAAACAGTACCCAGCAGTaGGCAGAGAATTCCTATAGC +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVRENSTQQ*AENSYS
Trigger: GCTATAGGAATTCTCTGCTCACTGCTGGGTACTGTT...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp TGTGCTACTGACATTCAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTGGCATCAGGCTGACATaGGACCACCTGCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: CATDIQVRECIVASKSNPGIRLT*DHLQFI
Trigger: GATAAACTGCAGGTGGTCTCATGTCAGCCTGATGCC...AGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGAGGTTTCAGCAGATTTaGAATGGATTTCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: STPQDTEPTSHPVLLTFRRFQQI*NGFLPP
Trigger: GGGAGGAAGAAATCCATTTCAAATCTGCTGAAACCT...CCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGTTCCATATGGCTGGCTaGGCACCATATTCCAATCTG +
Preference number: 4 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVFHMAG*APYSNL
Trigger: CAGATTGGAATATGGTGCTCAGCCAGCCATATGGAA...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACTGGCCAGGCTGGTCTTaGACTCCTGACCTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: NVLLLPKVTLKCSNHKQHWPGWS*TPDLKR
Trigger: TCGCTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...GTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGACTGGCCATGAATTATaGAAGACACACGGCAAAACA +
Preference number: 4 (lower is better)
Translates to: STPQDTEPTSHPVLLTFRTGHEL*KTHGKT
Trigger: TGTTTTGCCGTGTGTCTTGCATAATTCATGGCCAGT...CCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp AATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACGAGGGCCAGGAATGCTaGCTGACAAGACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: NVLLLPKVTLKCSNHKQHEGQEC*LTRQGT
Trigger: AGTGCCCTGTCTTGTCAGCCAGCATTCCTGGCCCTC...GTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACTTATTCCAGGCTGCTaGAGCTGCTGGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESLIPGC*SCWSSQ
Trigger: CTGTGAGCTCCAGCAGCTCCAGCAGCCTGGAATAAG...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGCATATGCATTCACCATaGGCTTTTGAATGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: STPQDTEPTSHPVLLTFRHMHSP*AFECPH
Trigger: GTGAGGACATTCAAAAGCCCATGGTGAATGCATATG...CCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CAGGTACATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGATGGTACTCCCAATTaGTGCGATATTACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: QVHEEDSTPQDTEPTSHPDGTPN*CDITKG
Trigger: ACCTTTGGTAATATCGCATCAATTGGGAGTACCATC...AGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATGTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCAGAGGCACCTGGGATGTaGAAGAATCCCACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESEAPGM*KNPTKA
Trigger: GGCTTTTGTGGGATTCTTTCACATCCCAGGTGCCTC...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGAGAGGTTGCAGTGAGCTaGGATCATGCCACCGCACTC +
Preference number: 4 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGEVAVS*DHATAL
Trigger: GAGTGCGGTGGCATGATCTCAGCTCACTGCAACCTC...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAAACAGCAGCATTTTCTaGTGCTGCTCTGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVRENSSIF*CCSVLS
Trigger: GGAAAGAACAGAGCAGCAGCAGAAAATGCTGCTGTT...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CAGGTACATGAGGAAGATTCCACTCCACAAGATACAGAACCCACTTCTCATCCTTCAGATGCCATCTCATaGCAGTTAGAATGGCAATCA +
Preference number: 4 (lower is better)
Translates to: QVHEEDSTPQDTEPTSHPSDAIS*QLEWQS
Trigger: TGATTGCCATTCTAACTGGCATGAGATGGCATCTGA...AGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAATCTTCCTCATGTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTTCCAACACAACTCCCAATTaGTGCGATATTACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GFEDSYKTVHQLLSIVPSNTTPN*CDITKG
Trigger: ACCTTTGGTAATATCGCATCAATTGGGAGTTGTGTT...GGAAGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630869.1
CDS-3UTR GCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATTGTCTTATTCCAGGCTaGTGGAGCTGCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CIVASKSNPQMFESQATHCLIPG*WSCWSS
Trigger: TGAGCTCCAGCAGCTCCAGCAGCCTGGAATAAGACA...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGCACCATATTCCAATCTaGAAAAGAGTCACCTTATTG +
Preference number: 4 (lower is better)
Translates to: STPQDTEPTSHPVLLTFRHHIPI*KRVTLL
Trigger: CAATAAGGTGACTCTTTTGCAGATTGGAATATGGTG...CCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp AAAAACCAGTCAGAGTTCTTAGCCACAGTAGGACAAAGAAAGGTTCAGCAATTACTGGGGACCATGTTTTaGCCTTCCCAGACAAGACAT +
Preference number: 4 (lower is better)
Translates to: KNQSEFLATVGQRKVQQLLGTMF*PSQTRH
Trigger: ATGTCTTGTCTGGGAAGGGCAAAACATGGTCCCCAG...TAATTGCTGAACCTTTCTTTGTCCTACTGTGGCTAAGAACTCTGACTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACTCAGCCTCCCAAAGTaGTCAGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESLSLPK*SDYRCE
Trigger: CTCACACCTGTAATCTGAGCACTTTGGGAGGCTGAG...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATTCCCTCCCAAGTAGCTaGGATTATAGGCGCACACCA +
Preference number: 4 (lower is better)
Translates to: CIVASKSNPQMFESQATHSLPSS*DYRRTP
Trigger: TGGTGTGCGCCTATAATCCCAGCTACTTGGGAGGGA...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CAA 72 bp CTAGTATGCTATACAGGTGACATCTTAAAAGGTACCTaGGCCTCATGTCCCACAAAGTCAATCCAGGCATTA +
Preference number: 4 (lower is better)
Translates to: LVCYTGDILKGT*ASCPTKSIQAL
Trigger: TAATGCCTGGATTGACTTTGTGGGACATGAGGCCAAGGTACCTTTTAAGATGTCACCTGTATAGCATACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGATTCTTGAGTGCAACTaGGATCAAGTAAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVILECN*DQVNFA
Trigger: AGCGAAGTTTACTTGATCTCAGTTGCACTCAAGAAT...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCACATGTATGTTTACTaGAGCATTGTTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVHMYVY*SIVHNS
Trigger: GCTGTTGTGAACAATGCTGCAGTAAACATACATGTG...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGAAACCAAAGAGCTTCTaGACAGCAAAAGAAACTATC +
Preference number: 4 (lower is better)
Translates to: FHSTRYRTHFSSCATDIQKPKSF*TAKETI
Trigger: GATAGTTTCTTTTGCTGTGCAGAAGCTCTTTGGTTT...CTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGGCTAAGTGCAAACACTaGGACTATTTAAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVAKCKH*DYLKVT
Trigger: AGTGACCTTTAAATAGTCCCAGTGTTTGCACTTAGC...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CAA 72 bp CCTGTGCTACTGACATTCAGGTTCGAGAATGTATTGTaGCTTCCAAAAGTAACCCTCAAATGTTCGAATCAC +
Preference number: 4 (lower is better)
Translates to: PVLLTFRFENVL*LPKVTLKCSNH
Trigger: GTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR CAA 72 bp CAGAGCAACAACATTCACCCAAATACCAGCTGCAATTaGTCCTTTAAGGATGCCTCACAAGGATATTATGTC +
Preference number: 4 (lower is better)
Translates to: QSNNIHPNTSCN*SFKDASQGYYV
Trigger: GACATAATATCCTTGTGAGGCATCCTTAAAGGACAAATTGCAGCTGGTATTTGGGTGAATGTTGTTGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATGAGGAAACAGGTACATaGGGAAGATTCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: CIVASKSNPQMFESQATHEETGT*GRFHST
Trigger: TGTGGAGTGGAATCTTCCTCATGTACCTGTTTCCTC...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp TTCATAAAACTGGCCATGAATTATGCAAGACACACGGCAAAACACTTCTTCACAGCTGTACCACGTCAATaGCAAAGACTGCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: FIKLAMNYARHTAKHFFTAVPRQ*QRLQNA
Trigger: TGCATTTTGCAGTCTTTGGCATTGACGTGGTACAGC...TGTGAAGAAGTGTTTTGCCGTGTGTCTTGCATAATTCATGGCCAGTTTTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630869.1
CDS-3UTR GCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGACTGTTAGGAACCAGCTaGACAGCAGGAGAGTTACTG +
Preference number: 4 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGLLGTS*TAGELL
Trigger: CAGTAACTCTCCTGCTGTGCAGCTGGTTCCTAACAG...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACTTTAATCACTGCTGTTaGTTGGTAACAGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNFNHCC*LVTGFS
Trigger: GCTGAAACCTGTTACCAAGCAACAGCAGTGATTAAA...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGACTATTTAAAGGTCACTaGGCAGGCGTGCCTACTTCC +
Preference number: 4 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGLFKGH*AGVPTS
Trigger: GGAAGTAGGCACGCCTGCCCAGTGACCTTTAAATAG...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGAAGGAGGCTGAAGCTGTaGCTTTGGGTGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGRRLKL*LWVDPK
Trigger: TTTTGGATCCACCCAAAGCCACAGCTTCAGCCTCCT...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp ACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGGTTCGAGAAAATGCTCATCATCACTaGTCATTAGGGAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: TRYRTHFSSCATDIQVRENAHHH*SLGKCK
Trigger: TTTGCATTTCCCTAATGACCAGTGATGATGAGCATT...TTCTCGAACCTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACTCATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESLISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATGAG...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TGTGCTACTGACATTCAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTTCACAAGCAACACATTaGTGCAAGATAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: CATDIQVRECIVASKSNPSQATH*CKIKGT
Trigger: TGTGCCTTTTATCTTGCAGCAATGTGTTGCTTGTGA...AGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR GCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCATATATCCTGCTGTGTTaGGAAACTCACTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESYILLC*ETHLLV
Trigger: AACCAGCAAGTGAGTTTCGCAACACAGCAGGATATA...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACTTCTGCAAAAGGGGATaGATTTCAGATAATGAGACA +
Preference number: 4 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNFCKRG*ISDNET
Trigger: TGTCTCATTATCTGAAATGCATCCCCTTTTGCAGAA...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACATAGGTTTGTATTCATaGGAATTCAGTGGGACAACA +
Preference number: 4 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNIGLYS*EFSGTT
Trigger: TGTTGTCCCACTGAATTCCCATGAATACAAACCTAT...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGACTGAAGCTGTGGCTTTaGGTGGATCCAAAAACCAGT +
Preference number: 4 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGLKLWL*VDPKTS
Trigger: ACTGGTTTTTGGATCCACCCAAAGCCACAGCTTCAG...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATGTGAAAATGCTACACTaGGGACCATGTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CIVASKSNPQMFESQATHVKMLH*GPCFAL
Trigger: AAGGGCAAAACATGGTCCCCAGTGTAGCATTTTCAC...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
3UTR CAA 72 bp CATCCTGTGCTACTGACATTCAGGTTCGAGAATGTATaGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: HPVLLTFRFENV*LLPKVTLKCSN
Trigger: ATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTGAATGTCAGTAGCACAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR TCA 90 bp AATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACTGCGAAGTTCAAGTTTaGTGCAGCAGTTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: NVLLLPKVTLKCSNHKQHCEVQV*CSSYCK
Trigger: CTTGCAATAACTGCTGCATCAAACTTGAACTTCGCA...GTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp TGTCTTATTCTCAATCTTAGGGGAAAACATTCAGCCTTTCATCATTACATAGGAGTGGGAGTTGAACAATaGGAACACATGGAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLILNLRGKHSAFHHYIGVGVEQ*EHMEKG
Trigger: TCCCTTTTCCATGTGTTCTCATTGTTCAACTCCCAC...TCCTATGTAATGATGAAAGGCTGAATGTTTTCCCCTAAGATTGAGAATAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATCTTCACAGCATCCCTTaGAAATGGTATGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CIVASKSNPQMFESQATHLHSIP*KWYEGK
Trigger: CTTTCCTTCATACCATTTGCAAGGGATGCTGTGAAG...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
3UTR CAA 72 bp TTAGCAGTAGATATTTTAAAGATGCCCTTCGACAGGTaGAGGAAATTCTCTTGTATCCCTAGTTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LAVDILKMPFDR*RKFSCIPSLLR
Trigger: TCTCAGCAAACTAGGGATACAAGAGAATTTCCTCAACCTGTCGAAGGGCATCTTTAAAATATCTACTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR TCA 90 bp AATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACGGCACAACTTTGTTGTaGATATGTACCATCATTTGC +
Preference number: 4 (lower is better)
Translates to: NVLLLPKVTLKCSNHKQHGTTLL*ICTIIC
Trigger: GCAAATGATGGTACATATTCACAACAAAGTTGTGCC...GTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR GCA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCATATACCACCAAAAAGTaGTTCTTTTCTACCTCACTC +
Preference number: 4 (lower is better)
Translates to: QVRECIVASKSNPQMFESYTTKK*FFSTSL
Trigger: GAGTGAGGTAGAAAAGAAGCACTTTTTGGTGGTATA...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGAGCACCTTCTTCAGCTaGTCCATTGCGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: STRPISCQEPLPDASTRGSTFFS*SIAAQS
Trigger: GGACTGGGCCGCAATGGACAAGCTGAAGAAGGTGCT...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp TGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGAGTCACTTGTTCTCAGATGCCCTGGCCCCGTCAGGCTaGTTCACACCTCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: WPGSPGACLKQSHLFSDALAPSG*FTPPQP
Trigger: AGGCTGGGGAGGTGTGAACAAGCCTGACGGGGCCAG...GGCATCTGAGAACAAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp ACTCAGAGAGCCAACAGCCCAGGGCAGATCACGCCAGGACAGTGCTTCCATATGTCTTCAGCTTGTCCATaGCGGCCCAGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: TQRANSPGQITPGQCFHMSSACP*RPSPHQ
Trigger: CTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAGA...CATATGGAAGCACTGTCCTGGCGTGATCTGCCCTGGGCTGTTGGCTCTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp ACTCTGTCCCTTACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACGCCCTAGTGGACCAGTaGGCCCTGTGCAAAGAACAG +
Preference number: 5 (lower is better)
Translates to: TLSLTVAPVISDGAAFCHALVDQ*ALCKEQ
Trigger: CTGTTCTTTGCACAGGGCCAACTGGTCCACTAGGGC...GTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGTAAGGGACAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGACTGGGGACCATGTTTaGCCCTTCCCAGACAAGACA +
Preference number: 5 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLTGDHV*PFPDKT
Trigger: TGTCTTGTCTGGGAAGGGCAAAACATGGTCCCCAGT...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGAGGTTCGAGAATGTATaGTTGCTTCCAAAAGTAACC +
Preference number: 5 (lower is better)
Translates to: STRPISCQEPLPDASTRGRFENV*LLPKVT
Trigger: GGTTACTTTTGGAAGCAACAATACATTCTCGAACCT...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGCTAAAGCAGAGTCACTaGTTCTCAGATGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLLKQSH*FSDARV
Trigger: TACTCTGGCATCTGAGAACAAGTGACTCTGCTTTAG...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp AGTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAAGGCTCTCCAGGGGCTaGTCTAAAGCAGAGTCACTT +
Preference number: 5 (lower is better)
Translates to: SASFLPHSMARLSRGLSKRLSRG*SKAESL
Trigger: AAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCT...TTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp AGTAGAAGCAGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGTGGGCCTTGATTCCCTaGACTGCACAGTGGTATAAC +
Preference number: 5 (lower is better)
Translates to: SRSRLTLCRTTVMASMLRWALIP*TAQWYN
Trigger: GTTATACCACTGTGCAGTCAAGGGAATCAAGGCCCA...CCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCTGCTTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp TCTACAAGACCCATCTCCTGCCAAGAACCCCTCCCTGACGCCTCCACTCGTGGGATAAAGCACCGTCTTTaGCTAGAAGAACAAGAGGAT +
Preference number: 5 (lower is better)
Translates to: STRPISCQEPLPDASTRGIKHRL*LEEQED
Trigger: ATCCTCTTGTTCTTCTAGCAAAAGACGGTGCTTTAT...CCCACGAGTGGAGGCGTCAGGGAGGGGTTCTTGGCAGGAGATGGGTCTTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp GACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCAGATGGTACTCCCAATaGATGCGATATTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: DHGDGFHAEGQVDPKTLSRWYSQ*MRYYQR
Trigger: CCTTTGGTAATATCGCATCAATTGGGAGTACCATCT...GGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp GCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCACTAAAGCAGAGTCACTaGTTCTCAGATGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: ASFLPHSMARLSRGLSKALKQSH*FSDARV
Trigger: TACTCTGGCATCTGAGAACAAGTGACTCTGCTTTAG...TGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp ACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTAATGCCCTTCGACAGGTaGAGGAAATTCTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: TVMASMLRDKWTPKLCPLMPFDR*RKFSCI
Trigger: GATACAAGAGAATTTCCTCAACCTGTCGAAGGGCAT...TAAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTGCGAAGTTCAAGTTaGATGCAGCAGTTATTGCAA +
Preference number: 5 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKLRSSS*MQQLLQ
Trigger: TTGCAATAACTGCTGCATCAAACTTGAACTTCGCAG...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGCAAGAACTCTGCAGTTaGAGATTTCTGATAGTCATG +
Preference number: 5 (lower is better)
Translates to: QDHGDGFHAEGQVDPKTLQELCS*RFLIVM
Trigger: CATGACTATCAGAAATCTCAAACTGCAGAGTTCTTG...CAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGATCTTAAAAGGTACCTaGGCCTCATGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: LLFYLTPWPGSPGACLKQILKGT*ASCPTK
Trigger: CTTTGTGGGACATGAGGCCAAGGTACCTTTTAAGAT...CTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp GACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCTACTCACTCATCAGGTaGCTTTTAATCACTGCTGTT +
Preference number: 5 (lower is better)
Translates to: DHGDGFHAEGQVDPKTLSYSLIR*LLITAV
Trigger: AACAGCAGTGATTAAAAGCAACCTGATGAGTGAGTA...GGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp AGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTGGGTTCAAGCAATTCTaGTGCCTCAGCCTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: RGFEDSYKTVHQLLSIVPGFKQF*CLSLPP
Trigger: GGGAGGGAGGCTGAGGCACAAGAATTGCTTGAACCC...AGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTAATACCAGCTGCAATTaGTCCTTTAAGGATGCCTCA +
Preference number: 5 (lower is better)
Translates to: HGDGFHAEGQVDPKTLSLNTSCN*SFKDAS
Trigger: TGAGGCATCCTTAAAGGACAAATTGCAGCTGGTATT...AAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp AGACTCACTCTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGAACCATAGCTCTCCCTaGGGAGATTACACAAATACA +
Preference number: 5 (lower is better)
Translates to: RLTLCRTTVMASMLRDKWNHSSP*GDYTNT
Trigger: TGTATTTGTGTAATCTCCCAAGGGAGAGCTATGGTT...CCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAGAGTGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS CCA 90 bp TATTACCAAAGGTATAAAACACTGCGAAGAGGTGTAGTCCCTTCCTaGGCACCCACAGCAGAACAGTACCCAGCAGTGAGCAGAGAATTC +
Preference number: 5 (lower is better)
Translates to: YYQRYKTLRRGVVPS*APTAEQYPAVSREF
Trigger: GAATTCTCTGCTCACTGCTGGGTACTGTTCTGCTGTGGGTGCCCAGGAAGGGACTACACCTCTTCGCAGTGTTTTATACCTTTGGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271375.7
ENST00000367829.5
ENST00000471981.1
ENST00000630869.1
CDS-3UTR CAA 90 bp ATTATGCAAGACACACGGCAAAACACTTCTTCACAGCATCCCTTGCAAATGGTAAGCACCTTCTTCAGCTaGTCCATTGCGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: IMQDTRQNTSSQHPLQMVSTFFS*SIAAQS
Trigger: GGACTGGGCCGCAATGGACAAGCTGAAGAAGGTGCT...TACCATTTGCAAGGGATGCTGTGAAGAAGTGTTTTGCCGTGTGTCTTGCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630869.1
CDS-3UTR CAA 90 bp ACTCTGTCCCTTACTGTTGCTCCCGTGATCTCTGATGGGGCTGCCTTTTGCCACTTCGAGAATGTATTGTaGCTTCCAAAAGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: TLSLTVAPVISDGAAFCHFENVL*LPKVTL
Trigger: GAGGGTTACTTTTGGAAGCAACAATACATTCTCGAA...GTGGCAAAAGGCAGCCCCATCAGAGATCACGGGAGCAACAGTAAGGGACAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp CTATGCAGGACCACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAATTCGAGAATGTATTGTaGCTTCCAAAAGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: LCRTTVMASMLRDKWTPKFENVL*LPKVTL
Trigger: GAGGGTTACTTTTGGAAGCAACAATACATTCTCGAA...TTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTGGTCCTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp CTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGCAGCTAAATCCCCTATTCTaGAGTGCAACTGAGATCAAG +
Preference number: 5 (lower is better)
Translates to: LLFYLTPWPGSPGACLKQLNPLF*SATEIK
Trigger: CTTGATCTCAGTTGCACTCAAGAATAGGGGATTTAG...CTGCTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGGGACCAGTTGTCCTTTaGTTGTTTGTGGCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVGPVVL*LFVAVY
Trigger: ATAAACAGCCACAAACAACAAAAGGACAACTGGTCC...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCATCTTCAGCTTGTCCATaGCGGCCCAGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: QVRECIVASKSNPQMFESSSACP*RPSPHQ
Trigger: CTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAGA...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp ACAACCAGAAACAGGCCAGGAAACTCTGGGGTCATGAAGGAGGCTGAAGCTGTGAAGGCTTATGTGCTGTaGCTGAATAGGTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: TTRNRPGNSGVMKEAEAVKAYVL*LNRFVF
Trigger: GAATACAAACCTATTCAGCAACAGCACATAAGCCTT...CACAGCTTCAGCCTCCTTCATGACCCCAGAGTTTCCTGGCCTGTTTCTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp GCCTTCCAAAGCTTCATAAAACTGGCCATGAATTATGCAAGACACACGGCAAAACCACCTGGGAATCACTaGCACCCAAGGCTTATGTGC +
Preference number: 5 (lower is better)
Translates to: AFQSFIKLAMNYARHTAKPPGNH*HPRLMC
Trigger: GCACATAAGCCTTGGGTGCAAGTGATTCCCAGGTGG...TTTTGCCGTGTGTCTTGCATAATTCATGGCCAGTTTTATGAAGCTTTGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630869.1
CDS-3UTR CAA 90 bp CACGGTGATGGCTTCCATGCTGAGGGACAAGTGGACCCCAAAACTCTGTCCCTTAAAAGAGTCACCTTATaGGTTCCCTTAACTTCCAAA +
Preference number: 5 (lower is better)
Translates to: HGDGFHAEGQVDPKTLSLKRVTL*VPLTSK
Trigger: TTTGGAAGTTAAGGGAACCAATAAGGTGACTCTTTT...AAGGGACAGAGTTTTGGGGTCCACTTGTCCCTCAGCATGGAAGCCATCACCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS GCA 90 bp GCTGTACCACGTCAATGCCAAAGACTGCAAAATGCAGAAGATAAGTaGAAGTCCCTTGTTATGCCACCAAAAGGCAGAACACAGGGTAAG +
Preference number: 5 (lower is better)
Translates to: AVPRQCQRLQNAEDK*KSLVMPPKGRTQGK
Trigger: CTTACCCTGTGTTCTGCCTTTTGGTGGCATAACAAGGGACTTGCACTTATCTTCTGCATTTTGCAGTCTTTGGCATTGACGTGGTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271375.7
ENST00000367829.5
ENST00000630869.1
CDS-3UTR CAA 90 bp GCTTATGTGCTGTTGCTGAATAGGTTTGTATTCATGGGAATTCAGTGGGACAACAGGCTCTCCAGGGGCTaGTCTAAAGCAGAGTCACTT +
Preference number: 5 (lower is better)
Translates to: AYVLLLNRFVFMGIQWDNRLSRG*SKAESL
Trigger: AAGTGACTCTGCTTTAGACAAGCCCCTGGAGAGCCT...GTTGTCCCACTGAATTCCCATGAATACAAACCTATTCAGCAACAGCACATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp TTCCACTCCACAAGATACAGAACCCACTTCTCATCCTGTGCTACTGACATTCAGCACAACAGCAAAGACTaGGAACCAACCCAAATGTCC +
Preference number: 5 (lower is better)
Translates to: FHSTRYRTHFSSCATDIQHNSKD*EPTQMS
Trigger: GGACATTTGGGTTGGTTCCAAGTCTTTGCTGTTGTG...CTGAATGTCAGTAGCACAGGATGAGAAGTGGGTTCTGTATCTTGTGGAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp GTGCTTCTTTTCTACCTCACTCCATGGCCAGGCTCTCCAGGGGCTTGTCTAAAGTCTCATCTTCCAAAGTaGTCAGTTATTTCTGGGATT +
Preference number: 5 (lower is better)
Translates to: VLLFYLTPWPGSPGACLKSHLPK*SVISGI
Trigger: AATCCCAGAAATAACTGACAACTTTGGAAGATGAGA...CTTTAGACAAGCCCCTGGAGAGCCTGGCCATGGAGTGAGGTAGAAAAGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGATAAGTGCAAGTCCCTaGTTATGCCACCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVISASP*LCHQKA
Trigger: TGCCTTTTGGTGGCATAACAAGGGACTTGCACTTAT...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp TGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCACAAGCAACACATCCACCTGGGAATCACTaGCACCCAAGGCTTATGTGC +
Preference number: 5 (lower is better)
Translates to: CIVASKSNPQMFESQATHPPGNH*HPRLMC
Trigger: GCACATAAGCCTTGGGTGCAAGTGATTCCCAGGTGG...ATGTGTTGCTTGTGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp GACAGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGAATCACTGCTGTTGCTaGGTAACAGGTTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: DRGFEDSYKTVHQLLSIVNHCCC*VTGFSR
Trigger: TCTGCTGAAACCTGTTACCAAGCAACAGCAGTGATT...CACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp AGAGGTTTCGAAGATAGTTACAAAACTGTCCACCAGCTTCTGTCCATAGTGCCTTATATCGGGGACCAGTaGTCCTTTTGTTGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: RGFEDSYKTVHQLLSIVPYIGDQ*SFCCLW
Trigger: CCACAAACAACAAAAGGACAACTGGTCCCCGATATA...AGGCACTATGGACAGAAGCTGGTGGACAGTTTTGTAACTATCTTCGAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271375.7
CDS-3UTR CAA 90 bp CAGGTTCGAGAATGTATTGTTGCTTCCAAAAGTAACCCTCAAATGTTCGAATCAATAAGTGCAAGTCCCTaGTTATGCCACCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: QVRECIVASKSNPQMFESISASP*LCHQKA
Trigger: TGCCTTTTGGTGGCATAACAAGGGACTTGCACTTAT...TGATTCGAACATTTGAGGGTTACTTTTGGAAGCAACAATACATTCTCGAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271375.7
ENST00000630869.1
CDS-3UTR CAA 90 bp TTCATAAAACTGGCCATGAATTATGCAAGACACACGGCAAAACACTTCTTCACAAAACACAACTCCCAATaGATGCGATATTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: FIKLAMNYARHTAKHFFTKHNSQ*MRYYQR
Trigger: CCTTTGGTAATATCGCATCAATTGGGAGTTGTGTTT...TGTGAAGAAGTGTTTTGCCGTGTGTCTTGCATAATTCATGGCCAGTTTTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630869.1
CDS CAA 90 bp CCACCAGCTCCAGCTCCTCAGCGGCAGCCTGTTGCGCTCGCTAAGTaGACGGCTCTTCCGGGTGCTAGGCAGCCGCCCAGCCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PPAPAPQRQPVALAK*TALPGARQPPSRPG
Trigger: GCCTGGGCGGCTGGGCGGCTGCCTAGCACCCGGAAGAGCCGTCAACTTAGCGAGCGCAACAGGCTGCCGCTGAGGAGCTGGAGCTGGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367829.5
ENST00000471981.1
CDS CAA 90 bp CCGCTCCGGTCCTCCGTGTCCTGCCCGCTCAGCACCTTCTTCAGCTaGTCCATTGCGGCCCAGTCCCCACCAGCTCCAGCTCCTCAGCGG +
Preference number: 6 (lower is better)
Translates to: PLRSSVSCPLSTFFS*SIAAQSPPAPAPQR
Trigger: CCGCTGAGGAGCTGGAGCTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAGAAGGTGCTGAGCGGGCAGGACACGGAGGACCGGAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271375.7
ENST00000367829.5
ENST00000471981.1
ENST00000630869.1
CDS TCA 72 bp CAGCTCCTCAGCGGCAGCCTGTTGCGCTCGCTAAGTTaGCGGCTCTTCCGGGTGCTAGGCAGCCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: QLLSGSLLRSLS*RLFRVLGSRPA
Trigger: GGCTGGGCGGCTGCCTAGCACCCGGAAGAGCCGTCAACTTAGCGAGCGCAACAGGCTGCCGCTGAGGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367829.5
ENST00000471981.1
CDS CAA 72 bp CCAGCTCCTCAGCGGCAGCCTGTTGCGCTCGCTAAGTaGACGGCTCTTCCGGGTGCTAGGCAGCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PAPQRQPVALAK*TALPGARQPPS
Trigger: GCTGGGCGGCTGCCTAGCACCCGGAAGAGCCGTCAACTTAGCGAGCGCAACAGGCTGCCGCTGAGGAGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367829.5
ENST00000471981.1
CDS CAA 90 bp GGTCCTCCGTGTCCTGCCCGCTCAGCACCTTCTTCAGCTTGTCCATaGCGGCCCAGTCCCCACCAGCTCCAGCTCCTCAGCGGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: GPPCPARSAPSSACP*RPSPHQLQLLSGSL
Trigger: CAGGCTGCCGCTGAGGAGCTGGAGCTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAGAAGGTGCTGAGCGGGCAGGACACGGAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271375.7
ENST00000367829.5
ENST00000471981.1
ENST00000630869.1
CDS CAA 72 bp TCCTCCGTGTCCTGCCCGCTCAGCACCTTCTTCAGCTaGTCCATTGCGGCCCAGTCCCCACCAGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SSVSCPLSTFFS*SIAAQSPPAPA
Trigger: AGCTGGAGCTGGTGGGGACTGGGCCGCAATGGACAAGCTGAAGAAGGTGCTGAGCGGGCAGGACACGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271375.7
ENST00000367829.5
ENST00000471981.1
ENST00000630869.1
CDS CCA 72 bp AGGTATAAAACACTGCGAAGAGGTGTAGTCCCTTCCTaGGCACCCACAGCAGAACAGTACCCAGCAGTGAGC +
Preference number: 6 (lower is better)
Translates to: RYKTLRRGVVPS*APTAEQYPAVS
Trigger: GCTCACTGCTGGGTACTGTTCTGCTGTGGGTGCCCAGGAAGGGACTACACCTCTTCGCAGTGTTTTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271375.7
ENST00000367829.5
ENST00000471981.1
ENST00000630869.1
CDS GCA 72 bp CCTCAACAACCTTGCCAAGGTGCGAAAAGAACTAGCTaGAGGTGGGAAGAAAAGAGCGGTAGTAGGATTGGC +
Preference number: 6 (lower is better)
Translates to: PQQPCQGAKRTS*RWEEKSGSRIG
Trigger: GCCAATCCTACTACCGCTCTTTTCTTCCCACCTGCAGCTAGTTCTTTTCGCACCTTGGCAAGGTTGTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471981.1