Pregenerated sensors for SFT2D1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198818Ensembl transcript IDs: ENST00000361731.4, ENST00000478705.5, ENST00000479490.1, ENST00000487841.5, ENST00000488773.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTGTACCAACATTCAAGTaGTCTTTTCCACAAGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVVPTFK*SFPQVS Trigger: AGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTAC...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| 3UTR CCA 72 bp | TTCAACTGTCACGTCAGTTGTTCCTGGAGTGTTTTATaGGGAAAAGCAAACTTCACCAAACATAGAGTACCA | + |
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Preference number: 3 (lower is better) Translates to: FNCHVSCSWSVL*GKANFTKHRVP Trigger: TGGTACTCTATGTTTGGTGAAGTTTGCTTTTCCCCATAAAACACTCCAGGAACAACTGACGTGACAGTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | GAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACCGGCCGCCACTCTGTTaGCTGCCCCTGACGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: EKQTSPNIEYQHSSALFHRPPLC*LPLTPT Trigger: GGTGGGCGTCAGGGGCAGGCAACAGAGTGGCGGCCG...GTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TTATGGGGAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTTGCGCAGTCAGGCCCTaGTCCTCGTCGTCCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LWGKANFTKHRVPTFKCSCAVRP*SSSSWP Trigger: CGGCCAGGACGACGAGGAGCAGGGCCTGACTGCGCA...AGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTCCCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTGAGGCATCCAGGACCTaGGCAGTCAGGCCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVEASRT*AVRPCS Trigger: GGAGCAGGGCCTGACTGCGCAGGTCCTGGATGCCTC...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTTGCTCCTCGTCGTCCTaGCCGCTCAGGACTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLICSSSS*PLRTRR Trigger: GCGGCGAGTCCTGAGCGGCCAGGACGACGAGGAGCA...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CCA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTGCCGCAGCTTCTCCATaGCCCTGTTACAGGGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVAAASP*PCYRAV Trigger: TACGGCCCTGTAACAGGGCCATGGAGAAGCTGCGGC...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR TCA 90 bp | GAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACGTTGAAACTAAGGGATaGGGCATCCAGGACCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: EKQTSPNIEYQHSSALFHVETKG*GIQDLR Trigger: GCGCAGGTCCTGGATGCCTCATCCCTTAGTTTCAAC...GTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTCTGCAAAAAGCTTTATaGCGCCCGGAAGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVLQKAL*RPEATA Trigger: TGCTGTGGCTTCCGGGCGGCATAAAGCTTTTTGCAG...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTGCCAGTCCCTTCTTATaGCACCAAAGAGCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLIASPFL*HQRAAH Trigger: GTGTGCTGCTCTTTGGTGGCATAAGAAGGGACTGGC...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CCA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTTGCATCCCTTGCATATaGGATGTACGACAGGCTATA | + |
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Preference number: 4 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVCIPCI*DVRQAI Trigger: TATAGCCTGTCGTACATCCCATATGCAAGGGATGCA...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR TCA 90 bp | TTATGGGGAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTGCTATACCAGGTCATTaGCAAGAACTGCAATATGCA | + |
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Preference number: 4 (lower is better) Translates to: LWGKANFTKHRVPTFKCSAIPGH*QELQYA Trigger: TGCATATTGCAGTTCTTGTCAATGACCTGGTATAGC...AGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTCCCCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTCTAACGCAGCAAGATTaGCGAGGGTATAAAACACTG | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLILTQQD*RGYKTL Trigger: CAGTGTTTTATACCCTCGGCAATCTTGCTGCGTTAG...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CCA 90 bp | TTATGGGGAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTCACGTCAGTTGTTCCTaGAGTGTTTTATGGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LWGKANFTKHRVPTFKCSHVSCS*SVLWGK Trigger: TTTTCCCCATAAAACACTCCAGGAACAACTGACGTG...AGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTCCCCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTGAGGGTATAAAACACTaGAAAAAGCTTTATGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLIEGIKH*KKLYAA Trigger: GGCGGCATAAAGCTTTTTGCAGTGTTTTATACCCTC...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTAATAACTGCATCCCTTaGATATGGGATGTACGACAG | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLINNCIP*IWDVRQ Trigger: CTGTCGTACATCCCATATGCAAGGGATGCAGTTATT...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CCA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTTTAAAAAGCATGTACTaGCTAACGCAGCAAGATTGC | + |
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Preference number: 4 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVLKSMY*LTQQDC Trigger: GCAATCTTGCTGCGTTAGCCAGTACATGCTTTTTAA...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTTCCTGGAGTGTTTTATaGGGAAAAGCAAACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLISWSVL*GKANFT Trigger: GGTGAAGTTTGCTTTTCCCCATAAAACACTCCAGGA...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TTATGGGGAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTGTACCAACATTCAAGTaGTCTTTTCCACAAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LWGKANFTKHRVPTFKCSVPTFK*SFPQVS Trigger: AGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTAC...AGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTCCCCATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TTATGGGGAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTAACATTTTCTTCAGTTaGTTCACAGGTCCCATTAAA | + |
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Preference number: 4 (lower is better) Translates to: LWGKANFTKHRVPTFKCSNIFFS*FTGPIK Trigger: TTTAATGGGACCTGTGAAGCAACTGAAGAAAATGTT...AGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTCCCCATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR GCA 90 bp | TCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACAAGTTTCTGATTACAGCATTTAATAACTaGATCCCTTGCATATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SPNIEYQHSSALFHKFLITAFNN*IPCIWD Trigger: ATCCCATATGCAAGGGATGCAGTTATTAAATGCTGT...AATCAGAAACTTGTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS CCA 90 bp | GCTCCTCGTCGTCCTGGCCGCTCAGGACTCGCCGCAGCTTCTCCATaGCCCTGTTACAGGGCCGTAGCGGCCGCCACTCTGTTGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: APRRPGRSGLAAASP*PCYRAVAAATLLPA Trigger: GGCAGGCAACAGAGTGGCGGCCGCTACGGCCCTGTAACAGGGCCATGGAGAAGCTGCGGCGAGTCCTGAGCGGCCAGGACGACGAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361731.4 ENST00000478705.5 ENST00000487841.5 |
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| CDS TCA 90 bp | AACTCTACGAGCACAGCACCCCATACTTCTCCCGAACAGTACCACTaGGCCACGCTGTCAAGTGCAACAGGACTCATCGCAGACCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: NSTSTAPHTSPEQYH*ATLSSATGLIADLP Trigger: GGGGAGGTCTGCGATGAGTCCTGTTGCACTTGACAGCGTGGCTCAGTGGTACTGTTCGGGAGAAGTATGGGGTGCTGTGCTCGTAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS-3UTR CAA 90 bp | GAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACGCGGCCGCCACTCTGTaGCCTGCCCCTGACGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: EKQTSPNIEYQHSSALFHAAATL*PAPDAH Trigger: GTGGGCGTCAGGGGCAGGCAACAGAGTGGCGGCCGC...GTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS GCA 90 bp | AACCACCCAGATATTTATGGCCTTTATGCAGATGAACTCTTACTGTaGGAGACACAAAAAGGCTACAAGGAGGACAGTCTGAGCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: NHPDIYGLYADELLL*ETQKGYKEDSLSRN Trigger: GTTTCTGCTCAGACTGTCCTCCTTGTAGCCTTTTTGTGTCTCGCACAGTAAGAGTTCATCTGCATAAAGGCCATAAATATCTGGGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS TCA 90 bp | CTTCACAAAAGTGGACTGGGAAAGGCAGTGCAGGTGAAGCACCTCTaGTCTGAAATGATAGGAACTAGAAATGTGTTGGATACTGGATTT | + |
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Preference number: 5 (lower is better) Translates to: LHKSGLGKAVQVKHL*SEMIGTRNVLDTGF Trigger: AAATCCAGTATCCAACACATTTCTAGTTCCTATCATTTCAGATCAGAGGTGCTTCACCTGCACTGCCTTTCCCAGTCCACTTTTGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CCA 90 bp | TTATCCAGCAATAGAGTGGAGAATGCAGGTAAACTCATCTTCCCTTaGACTCACCCTGTGATTTGGTCTCACTTTTATGTACTCACATGG | + |
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Preference number: 5 (lower is better) Translates to: LSSNRVENAGKLIFP*THPVIWSHFYVLTW Trigger: CCATGTGAGTACATAAAAGTGAGACCAAATCACAGGGTGAGTCCAAGGGAAGATGAGTTTACCTGCATTCTCCACTCTATTGCTGGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS-3UTR CAA 90 bp | GAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACGGCTATACCAGGTCATaGACAAGAACTGCAATATGC | + |
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Preference number: 5 (lower is better) Translates to: EKQTSPNIEYQHSSALFHGYTRS*TRTAIC Trigger: GCATATTGCAGTTCTTGTCAATGACCTGGTATAGCC...GTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CAA 90 bp | GAAAAGCAAACTTCACCAAACATAGAGTACCAACATTCAAGTGCTCTTTTCCACCAACTGTCACGTCAGTaGTTCCTGGAGTGTTTTATG | + |
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Preference number: 5 (lower is better) Translates to: EKQTSPNIEYQHSSALFHQLSRQ*FLECFM Trigger: CATAAAACACTCCAGGAACAACTGACGTGACAGTTG...GTGGAAAAGAGCACTTGAATGTTGGTACTCTATGTTTGGTGAAGTTTGCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS-3UTR CAA 90 bp | CCAGTATACAAAATGAGACTTAGTACAAAACGGTCTTCAACTGTCACGTCAGTTCATTTCAATCTGGTGTaGAAACTAAGGGATGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PVYKMRLSTKRSSTVTSVHFNLV*KLRDEA Trigger: TGCCTCATCCCTTAGTTTCAACACCAGATTGAAATG...AACTGACGTGACAGTTGAAGACCGTTTTGTACTAAGTCTCATTTTGTATACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS TCA 90 bp | TGGATTTTTCTGGATTTTTGGAATATCTGCATTACATTTACTGGTTaGGTATCAACCAAATCTGAGCATCATGTCAGCGTTCAAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: WIFLDFWNICITFTG*VSTKSEHHVSVQEV Trigger: AACTTCTTGAACGCTGACATGATGCTCAGATTTGGTTGATACTCAACCAGTAAATGTAATGCAGATATTCCAAAAATCCAGAAAAATCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS GCA 72 bp | AGGGATGAGGCATCCAGGACCTGCGCAGTCAGGCCCTaGTCCTCGTCGTCCTGGCCGCTCAGGACTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RDEASRTCAVRP*SSSSWPLRTRR Trigger: GCGGCGAGTCCTGAGCGGCCAGGACGACGAGGAGCAGGGCCTGACTGCGCAGGTCCTGGATGCCTCATCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS CCA 72 bp | CGTCCTGGCCGCTCAGGACTCGCCGCAGCTTCTCCATaGCCCTGTTACAGGGCCGTAGCGGCCGCCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: RPGRSGLAAASP*PCYRAVAAATL Trigger: CAGAGTGGCGGCCGCTACGGCCCTGTAACAGGGCCATGGAGAAGCTGCGGCGAGTCCTGAGCGGCCAGGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361731.4 ENST00000478705.5 ENST00000487841.5 |
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| CDS CCA 72 bp | AGGACCTGCGCAGTCAGGCCCTGCTCCTCGTCGTCCTaGCCGCTCAGGACTCGCCGCAGCTTCTCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTCAVRPCSSSS*PLRTRRSFSMA Trigger: GGCCATGGAGAAGCTGCGGCGAGTCCTGAGCGGCCAGGACGACGAGGAGCAGGGCCTGACTGCGCAGGTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS CCA 72 bp | GAATCCTGCGCAGTCAGGCCCTGCTCCTCGTCGTCCTaGCCGCTCAGGACTCGCCGCAGCTTCTCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: ESCAVRPCSSSS*PLRTRRSFSMA Trigger: GGCCATGGAGAAGCTGCGGCGAGTCCTGAGCGGCCAGGACGACGAGGAGCAGGGCCTGACTGCGCAGGATTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478705.5 ENST00000487841.5 |
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| CDS CAA 90 bp | GCTTCTCCATGGCCCTGTTACAGGGCCGTAGCGGCCGCCACTCTGTaGCCTGCCCCTGACGCCCACCAGGAAACCCCGAACCCGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: ASPWPCYRAVAAATL*PAPDAHQETPNPKP Trigger: GGGTTTCGGGTTCGGGGTTTCCTGGTGGGCGTCAGGGGCAGGCAACAGAGTGGCGGCCGCTACGGCCCTGTAACAGGGCCATGGAGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478705.5 |
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| CDS GCA 72 bp | AAGAGATTAATCTGTGAATCCTGCGCAGTCAGGCCCTaGTCCTCGTCGTCCTGGCCGCTCAGGACTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: KRLICESCAVRP*SSSSWPLRTRR Trigger: GCGGCGAGTCCTGAGCGGCCAGGACGACGAGGAGCAGGGCCTGACTGCGCAGGATTCACAGATTAATCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478705.5 ENST00000487841.5 |
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| CDS TCA 72 bp | AGCACAGCACCCCATACTTCTCCCGAACAGTACCACTaGGCCACGCTGTCAAGTGCAACAGGACTCATCGCA | + |
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Preference number: 6 (lower is better) Translates to: STAPHTSPEQYH*ATLSSATGLIA Trigger: TGCGATGAGTCCTGTTGCACTTGACAGCGTGGCTCAGTGGTACTGTTCGGGAGAAGTATGGGGTGCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CAA 90 bp | AAAACGCCACATACGAAGCAGATGGCAAACCATTTCAATCTGGTGTaGAAACTAAGGGATGAGGCATCCAGGACCTGCGCAGTCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KTPHTKQMANHFNLV*KLRDEASRTCAVRP Trigger: GGGCCTGACTGCGCAGGTCCTGGATGCCTCATCCCTTAGTTTCAACACCAGATTGAAATGGTTTGCCATCTGCTTCGTATGTGGCGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS GCA 72 bp | GATTGCCGAGGGTATAAAACACTGCAAAAAGCTTTATaGCGCCCGGAAGCCACAGCAATCCAGTTCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: DCRGYKTLQKAL*RPEATAIQFQE Trigger: TTCTTGGAACTGGATTGCTGTGGCTTCCGGGCGGCATAAAGCTTTTTGCAGTGTTTTATACCCTCGGCAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000361731.4 ENST00000478705.5 ENST00000487841.5 ENST00000488773.1 |
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| CDS CAA 72 bp | CATACGAAGCAGATGGCAAACCATTTCAATCTGGTGTaGAAACTAAGGGATGAGGCATCCAGGACCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: HTKQMANHFNLV*KLRDEASRTCA Trigger: TGCGCAGGTCCTGGATGCCTCATCCCTTAGTTTCAACACCAGATTGAAATGGTTTGCCATCTGCTTCGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361731.4 |
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| CDS TCA 72 bp | AGTGGACTGGGAAAGGCAGTGCAGGTGAAGCACCTCTaGTCTGAAATGATAGGAACTAGAAATGTGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SGLGKAVQVKHL*SEMIGTRNVLD Trigger: ATCCAACACATTTCTAGTTCCTATCATTTCAGATCAGAGGTGCTTCACCTGCACTGCCTTTCCCAGTCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CAA 72 bp | CATACGAAGCAGATGGCAAACCATTTCAATCTGGTGTaGAAACTAAGGGATGAGGCATCCAGGACCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HTKQMANHFNLV*KLRDEASRTSR Trigger: TCTTGAGGTCCTGGATGCCTCATCCCTTAGTTTCAACACCAGATTGAAATGGTTTGCCATCTGCTTCGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000478705.5 ENST00000487841.5 ENST00000488773.1 |
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| CDS GCA 72 bp | AAAGTACTCTTCACTAACACAGAAGAGCGCAGGAGCTaGAGGGCACGTTTAATCAACCACCCAGATATTTAT | + |
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Preference number: 6 (lower is better) Translates to: KVLFTNTEERRS*RARLINHPDIY Trigger: ATAAATATCTGGGTGGTTGATTAAACGTGCCCTGCAGCTCCTGCGCTCTTCTGTGTTAGTGAAGAGTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CAA 72 bp | CAGGGCCACAGAGTCAACATCAGGATAAATTCCACGTaGTATTTATCCAGCAATAGAGTGGAGAATGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QGHRVNIRINST*YLSSNRVENAG Trigger: ACCTGCATTCTCCACTCTATTGCTGGATAAATACAACGTGGAATTTATCCTGATGTTGACTCTGTGGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS GCA 72 bp | GATATTTATGGCCTTTATGCAGATGAACTCTTACTGTaGGAGACACAAAAAGGCTACAAGGAGGACAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DIYGLYADELLL*ETQKGYKEDSL Trigger: CAGACTGTCCTCCTTGTAGCCTTTTTGTGTCTCGCACAGTAAGAGTTCATCTGCATAAAGGCCATAAATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CAA 90 bp | CAGATATCACAGGGCCACAGAGTCAACATCAGGATAAATTCCACGTaGTATTTATCCAGCAATAGAGTGGAGAATGCAGGTAAACTCATC | + |
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Preference number: 6 (lower is better) Translates to: QISQGHRVNIRINST*YLSSNRVENAGKLI Trigger: GATGAGTTTACCTGCATTCTCCACTCTATTGCTGGATAAATACAACGTGGAATTTATCCTGATGTTGACTCTGTGGCCCTGTGATATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CCA 72 bp | AATAGAGTGGAGAATGCAGGTAAACTCATCTTCCCTTaGACTCACCCTGTGATTTGGTCTCACTTTTATGTA | + |
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Preference number: 6 (lower is better) Translates to: NRVENAGKLIFP*THPVIWSHFYV Trigger: TACATAAAAGTGAGACCAAATCACAGGGTGAGTCCAAGGGAAGATGAGTTTACCTGCATTCTCCACTCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS CCA 72 bp | AGTAGAAAGAAGGCCGAAAGAAAGGTGATCCCAAACTaGGTAATGTCGAGTAAGAGGAATGTAAAATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SRKKAERKVIPN*VMSSKRNVKWQ Trigger: TTGCCATTTTACATTCCTCTTACTCGACATTACCCAGTTTGGGATCACCTTTCTTTCGGCCTTCTTTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS TCA 72 bp | CTGCATTACATTTACTGGTTGAGTATCAACCAAATCTaGGCATCATGTCAGCGTTCAAGAAGTTTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: LHYIYWLSINQI*ASCQRSRSFGF Trigger: AAATCCAAAACTTCTTGAACGCTGACATGATGCTCAGATTTGGTTGATACTCAACCAGTAAATGTAATGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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| CDS TCA 72 bp | CTGGATTTTTGGAATATCTGCATTACATTTACTGGTTaGGTATCAACCAAATCTGAGCATCATGTCAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LDFWNICITFTG*VSTKSEHHVSV Trigger: AACGCTGACATGATGCTCAGATTTGGTTGATACTCAACCAGTAAATGTAATGCAGATATTCCAAAAATCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479490.1 ENST00000487841.5 |
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