Pregenerated sensors for SFRP4 (Homo sapiens)
Ensembl gene IDs: ENSG00000106483Ensembl transcript IDs: ENST00000436072.7, ENST00000447200.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGAAATTATTCTCAGGGTaGATGTCCTGGGAAGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: PNCQVILISEVEPQLSSLKLFSG*MSWEVR Trigger: TCTTACTTCCCAGGACATCCACCCTGAGAATAATTT...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| 3UTR-3UTR CCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAGCAAACCTACCACTATaGCTTGTGATGGCTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRANLPL*LVMAYK Trigger: TTTGTAAGCCATCACAAGCCATAGTGGTAGGTTTGC...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| 3UTR CAA 90 bp | ATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCTaGACAGGAAAACTTATCTCAATAAAGGGCCAAGCAAAGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: MEYNTAVRNEMVSAF*TGKLISIKGQAKEA Trigger: TGCCTCCTTTGCTTGGCCCTTTATTGAGATAAGTTTTCCTGTCAAGAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| 3UTR-3UTR CAA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGAGGCCATTTTTAAGCTaGTCAAATTATTCTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PNCQVILISEVEPQLSSLRPFLS*SNYSQG Trigger: ACCCTGAGAATAATTTGACAAGCTTAAAAATGGCCT...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| 3UTR TCA 72 bp | AAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGATaGGTGACATACCTCTCTTGTGGGTATAAAATACTT | + |
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Preference number: 3 (lower is better) Translates to: KLFSGWMSWEVR*VTYLSCGYKIL Trigger: AAGTATTTTATACCCACAAGAGAGGTATGTCACTCATCTTACTTCCCAGGACATCCACCCTGAGAATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| 3UTR-3UTR CAA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCACAGGAATCCAGACATaGTCTGCCTCTCCTTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFTGIQT*SASPFY Trigger: ATAAAAAGGAGAGGCAGACAATGTCTGGATTCCTGT...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGCGGAGCTCCGCCGTCTaGCACACAGGGCACGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALRSSAV*HTGHEQ Trigger: CTGCTCGTGCCCTGTGTGCCAGACGGCGGAGCTCCG...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGACTGCCCTCTCGCGCTaGGACCCCGGCAGACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALTALSR*DPGRQK Trigger: TTTCTGTCTGCCGGGGTCGCAGCGCGAGAGGGCAGT...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGACCAGCTCCTCGTACTaGTCGATGGCCAGGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALTSSSY*SMARMA Trigger: CGCCATCCTGGCCATCGAGCAGTACGAGGAGCTGGT...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGATGTTCCAGGGCATGTaGCGGCACATAGGGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALMFQGM*RHIGMR Trigger: GCGCATCCCTATGTGCCGGCACATGCCCTGGAACAT...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGCTTCTTGGGACTGGCTaGTTTGGGAGCAGGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALLLGTG*FGSRRL Trigger: AAGCCTCCTGCTCCCAAACCAGCCAGTCCCAAGAAG...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGGTAATGAGCGGGACTTaGGTTCGAGGGATGGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALVMSGT*VRGMGD Trigger: ATCACCCATCCCTCGAACTCAAGTCCCGCTCATTAC...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGACGCCCAGCGCCAGGTaGAGCCACAGGCACAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: PNCQVILISEVEPQLSSLTPSAR*SHRHSA Trigger: GGCGCTGTGCCTGTGGCTGCACCTGGCGCTGGGCGT...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGTCACCTTTTTACACTTaGACCGATCGGGGCTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALSPFYT*TDRGLG Trigger: GCCTAAGCCCCGATCGGTGCAAGTGTAAAAAGGTGA...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGAGAGGAACATGGCACTaGCCTCTCGCGCTGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: PNCQVILISEVEPQLSSLRGTWH*PLALRP Trigger: GGGTCGCAGCGCGAGAGGGCAGTGCCATGTTCCTCT...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGTTGCAGCCACTCCTCTaGACAGCTTTTATTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALLQPLL*TAFILA Trigger: TGCCAAAATAAAAGCTGTGCAGAGGAGTGGCTGCAA...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGATCGTCGCGCGCGCGTTaGCACACCGACTTGCACGGC | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRSSRAR*HTDLHG Trigger: GCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGA...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGTGGGTGATGAGGACTTaGAGATCTCTTTTACATCCA | + |
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Preference number: 4 (lower is better) Translates to: VPGNAQPHPVRKSEVSALWVMRT*RSLLHP Trigger: TGGATGTAAAAGAGATCTTCAAGTCCTCATCACCCA...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGGGATGGAGAGGAACATaGCACTGCCCTCTCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNCQVILISEVEPQLSSLGWRGT*HCPLAL Trigger: CAGCGCGAGAGGGCAGTGCCATGTTCCTCTCCATCC...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGCCTCCGGGAGGTCCGTaGCGATGGCTTCAGGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQPPGGP*RWLQAR Trigger: TCTCGCCTGAAGCCATCGTCACGGACCTCCCGGAGG...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGGCGCCCTTCTCTTCCTaGCACCCTCATCTTTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNCQVILISEVEPQLSSLAPFSS*HPHLSL Trigger: CAGCGAAAGATGAGGGTGGCAGGAAGAGAAGGGCGC...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGGCAGGAACTCCAGGGTaGAAATGGGCGCGTACATGG | + |
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Preference number: 4 (lower is better) Translates to: PNCQVILISEVEPQLSSLAGTPG*KWARTW Trigger: CCATGTACGCGCCCATTTGCACCCTGGAGTTCCTGC...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGGGTTGGGCATCCGCGTaGTGTTCCAGGGCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQGWASA*CSRACA Trigger: GGCACATGCCCTGGAACATCACGCGGATGCCCAACC...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGGGTTGTACATCTTCATaGGGGGCTCGCAGTCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQGCTSS*GARSRR Trigger: GCGACGACTGCGAGCCCCTCATGAAGATGTACAACC...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGCATCCACCACCGTTGTaGCCTCATTGCAGCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQHPPPL*PHCSHS Trigger: GGAGTGGCTGCAATGAGGTCACAACGGTGGTGGATG...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCAGCGCAGCACGGCGCTaGAGTTCACGTCCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFSAARR*SSRPPA Trigger: AGCTGGTGGACGTGAACTGCAGCGCCGTGCTGCGCT...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGGGCTTGATAGGGTCGTaGAGGAACTCCAGGGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQGLIGS*RNSRVQ Trigger: TTGCACCCTGGAGTTCCTGCACGACCCTATCAAGCC...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGTGGCTTCAGGCGAGATaGACACGCCACGGTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQWLQAR*TRHGHR Trigger: TCTATGACCGTGGCGTGTGCATCTCGCCTGAAGCCA...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGCGGAAGTCTCCGCTTTaGAAACTAGTTAGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: PNCQVILISEVEPQLSSLRKSPL*KLVSSH Trigger: GTGTGAGCTAACTAGTTTCCAAAGCGGAGACTTCCG...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGGAGGAAGAAATCCTCTaGGGCGCAGGAGAGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQEEEIL*GAGEFL Trigger: AAGAAACTCTCCTGCGCCCCAGAGGATTTCTTCCTC...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGAAGAAGCATCATCCTTaGGCGCCACTCGTAACACAT | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQKKHHP*APLVTH Trigger: ATGTGTTACGAGTGGCGCTCAAGGATGATGCTTCTT...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGATCCTGGGAAGTAAGATaGGTGACATACCTCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRSWEVR*VTYLSC Trigger: ACAAGAGAGGTATGTCACTCATCTTACTTCCCAGGA...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCTGTTCTTCTTGGGACTaGCTGGTTTGGGAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFCSSWD*LVWEQE Trigger: CTCCTGCTCCCAAACCAGCCAGTCCCAAGAAGAACA...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAAGCTGTAGTTTTTGCTaGGATACGTTGCCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRSCSFC*DTLPKL Trigger: CAACTTTGGCAACGTATCTCAGCAAAAACTACAGCT...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGGCACACAGGTTACTCTaGATGCAATGCAATAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQAHRLL*MQCNKP Trigger: AGGCTTATTGCATTGCATTCAGAGTAACCTGTGTGC...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCCTTTCGGGCCAGCTGTaGTTGTACATCTTCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFLSGQL*LYIFMR Trigger: CCTCATGAAGATGTACAACCACAGCTGGCCCGAAAG...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGACTGTACCATCATGTCTaGTGTGATGTCTATCCACTT | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRLYHHV*CDVYPL Trigger: AAGTGGATAGACATCACACCAGACATGATGGTACAG...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAGGGTTTGTTCTCTTCTaGGCACTCCTAGTTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRGFVLF*ALLVLM Trigger: CATTAAAACTAGGAGTGCCCAGAAGAGAACAAACCC...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAAATTTGGCACTCACATaGAGGCCATTTTTAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRNLALT*RPFLSL Trigger: CAAGCTTAAAAATGGCCTTCATGTGAGTGCCAAATT...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGTTTGCTGAGATACGTTaGCAAAGTTGGCTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQFAEIR*QSWLHL Trigger: AAGGTGAAGCCAACTTTGGCAACGTATCTCAGCAAA...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAAAATTATTCTCAGGGTaGATGTCCTGGGAAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRKLFSG*MSWEVR Trigger: TCTTACTTCCCAGGACATCCACCCTGAGAATAATTT...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCGCAAACCTACCACTATaGCTTGTGATGGCTTACAAA | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFANLPL*LVMAYK Trigger: TTTGTAAGCCATCACAAGCCATAGTGGTAGGTTTGC...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCTTCTCATTTCAGAGGTaGAACCTCAACTTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFFSFQR*NLNFPL Trigger: GAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAA...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCTGGTTTCTGCTTTCTTaGCAGGAAAACTTATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFWFLLS*QENLSQ Trigger: TTGAGATAAGTTTTCCTGTCAAGAAAGCAGAAACCA...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR TCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCATTCAGTATTGTCAGTaGAGAAACCACCTAAGTATC | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFIQYCQ*RNHLSI Trigger: GATACTTAGGTGGTTTCTTCACTGACAATACTGAAT...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR GCA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCTACTCTTCTAGAGTATaGACACAGGTTACTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFYSSRV*TQVTLN Trigger: ATTCAGAGTAACCTGTGTGCATACTCTAGAAGAGTA...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS GCA 90 bp | ATGCGCACCGCCTCGCAGGGCGCGCCGCGCACGCCCAGCGCCAGGTaGAGCCACAGGCACAGCGCCACTAGGATGGAGAGGAACATGGCA | + |
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Preference number: 5 (lower is better) Translates to: MRTASQGAPRTPSAR*SHRHSATRMERNMA Trigger: TGCCATGTTCCTCTCCATCCTAGTGGCGCTGTGCCTGTGGCTGCACCTGGCGCTGGGCGTGCGCGGCGCGCCCTGCGAGGCGGTGCGCAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 90 bp | GCACGCCCAGCGCCAGGTGCAGCCACAGGCACAGCGCCACTAGGATaGAGAGGAACATGGCACTGCCCTCTCGCGCTGCGACCCCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ARPAPGAATGTAPLG*RGTWHCPLALRPRQ Trigger: CTGCCGGGGTCGCAGCGCGAGAGGGCAGTGCCATGTTCCTCTCCATCCTAGTGGCGCTGTGCCTGTGGCTGCACCTGGCGCTGGGCGTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 90 bp | CCAGGTGCAGCCACAGGCACAGCGCCACTAGGATGGAGAGGAACATaGCACTGCCCTCTCGCGCTGCGACCCCGGCAGACAGAAAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PGAATGTAPLGWRGT*HCPLALRPRQTESA Trigger: GGCGCTTTCTGTCTGCCGGGGTCGCAGCGCGAGAGGGCAGTGCCATGTTCCTCTCCATCCTAGTGGCGCTGTGCCTGTGGCTGCACCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS GCA 90 bp | GCAGCCACAGGCACAGCGCCACTAGGATGGAGAGGAACATGGCACTaGCCTCTCGCGCTGCGACCCCGGCAGACAGAAAGCGCCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: AATGTAPLGWRGTWH*PLALRPRQTESALL Trigger: GAGAAGGGCGCTTTCTGTCTGCCGGGGTCGCAGCGCGAGAGGGCAGTGCCATGTTCCTCTCCATCCTAGTGGCGCTGTGCCTGTGGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS GCA 90 bp | CTCTCGCGCTGCGACCCCGGCAGACAGAAAGCGCCCTTCTCTTCCTaGCACCCTCATCTTTCGCTGTCCCTTCGCCGAGGAAGAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: LSRCDPGRQKAPFSS*HPHLSLSLRRGRNP Trigger: AGGATTTCTTCCTCGGCGAAGGGACAGCGAAAGATGAGGGTGGCAGGAAGAGAAGGGCGCTTTCTGTCTGCCGGGGTCGCAGCGCGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 90 bp | TGGTTGTACATCTTCATGAGGGGCTCGCAGTCGTCGCGCGCGCGTTaGCACACCGACTTGCACGGCTTGATAGGGTCGTGCAGGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: WLYIFMRGSQSSRAR*HTDLHGLIGSCRNS Trigger: GGAGTTCCTGCACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGACTGCGAGCCCCTCATGAAGATGTACAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 90 bp | GCCACCCTCATCTTTCGCTGTCCCTTCGCCGAGGAAGAAATCCTCTaGGGCGCAGGAGAGTTTCTTCCCCCAAACTCCAGTCGGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: ATLIFRCPFAEEEIL*GAGEFLPPNSSRQQ Trigger: TTGCTGCCGACTGGAGTTTGGGGGAAGAAACTCTCCTGCGCCCCAGAGGATTTCTTCCTCGGCGAAGGGACAGCGAAAGATGAGGGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGGTCGTCGCGCGCGCGTaGGCACACCGACTTGCACGG | + |
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Preference number: 5 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQVVARA*AHRLAR Trigger: CCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGAC...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGGTTTTAATGTTCTTCTaGGGACTGGCTGGTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VPGNAQPHPVRKSEVSALVLMFF*GLAGLG Trigger: TCCCAAACCAGCCAGTCCCAAGAAGAACATTAAAAC...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGCGTTGGCACACCGACTaGCACGGCTTGATAGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PNCQVILISEVEPQLSSLRWHTD*HGLIGS Trigger: CGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACG...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGGATACGTTGCCAAAGTaGGCTTCACCTTTTTACACT | + |
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Preference number: 5 (lower is better) Translates to: VPGNAQPHPVRKSEVSALDTLPK*ASPFYT Trigger: AGTGTAAAAAGGTGAAGCCAACTTTGGCAACGTATC...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 90 bp | GCGTTTACAGTCAACATCAAGAGGCCTTTCCTGTACCATCATGTCTaGTGTGATGTCTATCCACTTAACATCCTCCGGGAGGTCCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFTVNIKRPFLYHHV*CDVYPLNILREVRD Trigger: GTCACGGACCTCCCGGAGGATGTTAAGTGGATAGACATCACACCAGACATGATGGTACAGGAAAGGCCTCTTGATGTTGACTGTAAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGATGGTTTCTGCTTTCTaGACAGGAAAACTTATCTCA | + |
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Preference number: 5 (lower is better) Translates to: VPGNAQPHPVRKSEVSALMVSAF*TGKLIS Trigger: TGAGATAAGTTTTCCTGTCAAGAAAGCAGAAACCAT...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCAATGCCCAGCCTCATCCTGTAAGGAAGTCGGAAGTCTCCGCTTTGGATGTTTATTCAGTATaGTCAGTGAAGAAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPGNAQPHPVRKSEVSALDVYSV*SVKKPP Trigger: AGGTGGTTTCTTCACTGACAATACTGAATAAACATC...CAAAGCGGAGACTTCCGACTTCCTTACAGGATGAGGCTGGGCATTGCCTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAACCGACTTGCACGGCTaGATAGGGTCGTGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRTDLHG*IGSCRN Trigger: GTTCCTGCACGACCCTATCAAGCCGTGCAAGTCGGT...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS TCA 90 bp | ATAATACTCTGTTCCAATTGCATCCTGATGTTCACTTTGATCACCTaGTTGACTGTTGTCTGCCAGCCTTCTTCACAGCACCGGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IILCSNCILMFTLIT*LTVVCQPSSQHRLQ Trigger: CTGGAGCCGGTGCTGTGAAGAAGGCTGGCAGACAACAGTCAATCAGGTGATCAAAGTGAACATCAGGATGCAATTGGAACAGAGTATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447200.2 |
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| CDS-3UTR CAA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGCAAGAAGCATCATCCTaGAGCGCCACTCGTAACACA | + |
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Preference number: 5 (lower is better) Translates to: PNCQVILISEVEPQLSSLQEASS*SATRNT Trigger: TGTGTTACGAGTGGCGCTCAAGGATGATGCTTCTTG...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS TCA 90 bp | AGGATGTGTGGACACTGGCAAGAAGAATTTGTAATGAGCGGGACTTaGGTTCGAGGGATGGGTGATGAGGACTTGAAGATCTCTTTTACA | + |
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Preference number: 5 (lower is better) Translates to: RMCGHWQEEFVMSGT*VRGMGDEDLKISFT Trigger: TGTAAAAGAGATCTTCAAGTCCTCATCACCCATCCCTCGAACTCAAGTCCCGCTCATTACAAATTCTTCTTGCCAGTGTCCACACATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436072.7 ENST00000447200.2 |
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| CDS CCA 90 bp | GCGTTTACAGTCAACATCAAGAGGCCTTTCCTGTACCATCATGTCTaGTGTGATGTCTATCCACTTAACATCTTTGGCAGGAATATCAGG | + |
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Preference number: 5 (lower is better) Translates to: AFTVNIKRPFLYHHV*CDVYPLNIFGRNIR Trigger: CCTGATATTCCTGCCAAAGATGTTAAGTGGATAGACATCACACCAGACATGATGGTACAGGAAAGGCCTCTTGATGTTGACTGTAAACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447200.2 |
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| CDS-3UTR CAA 90 bp | GCCATTTTTAAGCTTGTCAAATTATTCTCAGGGTGGATGTCCTGGGAAGTAAGAACACTCTTTTCGGGTTaGTTCTCTTCTGGGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: AIFKLVKLFSGWMSWEVRTLFSG*FSSGHS Trigger: GGAGTGCCCAGAAGAGAACAAACCCGAAAAGAGTGT...TCTTACTTCCCAGGACATCCACCCTGAGAATAATTTGACAAGCTTAAAAATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGTTCACCTTTTTACACTaGCACCGATCGGGGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQFTFLH*HRSGLR Trigger: CCTAAGCCCCGATCGGTGCAAGTGTAAAAAGGTGAA...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCACCGTTGTGACCTCATaGCAGCCACTCCTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFTVVTS*QPLLCT Trigger: TGTGCAGAGGAGTGGCTGCAATGAGGTCACAACGGT...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | AGGTCGAATTGTAACAAGCATTATTTTCCCTACTCTTCTAGAGTATGCACACAGCTGCTTAAGAGGGTGTaGACAAGAAGCATCATGATC | + |
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Preference number: 5 (lower is better) Translates to: RSNCNKHYFPYSSRVCTQLLKRV*TRSIMI Trigger: GATCATGATGCTTCTTGTCAACACCCTCTTAAGCAG...CTGTGTGCATACTCTAGAAGAGTAGGGAAAATAATGCTTGTTACAATTCGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | CCCAACTGTCAAGTAATTCTCATTTCAGAGGTGGAACCTCAACTTTCCTCTCTGAGGATTTTATTTCCTTaGGGCGTTGTGCATTTATTG | + |
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Preference number: 5 (lower is better) Translates to: PNCQVILISEVEPQLSSLRILFP*GVVHLL Trigger: CAATAAATGCACAACGCCCAAAGGAAATAAAATCCT...CAGAGAGGAAAGTTGAGGTTCCACCTCTGAAATGAGAATTACTTGACAGTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS-3UTR CAA 90 bp | ATGCATACTATGGAATATAACACAGCTGTTAGAAATGAGATGGTTTCTGCTTTCAGGCCATTTTTAAGCTaGTCAAATTATTCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MHTMEYNTAVRNEMVSAFRPFLS*SNYSQG Trigger: ACCCTGAGAATAATTTGACAAGCTTAAAAATGGCCT...GAAAGCAGAAACCATCTCATTTCTAACAGCTGTGTTATATTCCATAGTATGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 72 bp | CGGGGCCGCGGGGTCCGGCCGCGGAGCTCCGCCGTCTaGCACACAGGGCACGAGCAGCGCCAGCTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RGRGVRPRSSAV*HTGHEQRQLSA Trigger: GGCTGAGAGCTGGCGCTGCTCGTGCCCTGTGTGCCAGACGGCGGAGCTCCGCGGCCGGACCCCGCGGCCCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS GCA 72 bp | GCCTCGCAGGGCGCGCCGCGCACGCCCAGCGCCAGGTaGAGCCACAGGCACAGCGCCACTAGGATGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASQGAPRTPSAR*SHRHSATRMER Trigger: CCTCTCCATCCTAGTGGCGCTGTGCCTGTGGCTGCACCTGGCGCTGGGCGTGCGCGGCGCGCCCTGCGAGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CAA 72 bp | GGCTCGCAGTCGTCGCGCGCGCGTTGGCACACCGACTaGCACGGCTTGATAGGGTCGTGCAGGAACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSQSSRARWHTD*HGLIGSCRNSR Trigger: CCTGGAGTTCCTGCACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGACTGCGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS GCA 72 bp | GGCACAGCGCCACTAGGATGGAGAGGAACATGGCACTaGCCTCTCGCGCTGCGACCCCGGCAGACAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTAPLGWRGTWH*PLALRPRQTES Trigger: GCTTTCTGTCTGCCGGGGTCGCAGCGCGAGAGGGCAGTGCCATGTTCCTCTCCATCCTAGTGGCGCTGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 72 bp | ATCTTCATGAGGGGCTCGCAGTCGTCGCGCGCGCGTTaGCACACCGACTTGCACGGCTTGATAGGGTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: IFMRGSQSSRAR*HTDLHGLIGSC Trigger: GCACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGACTGCGAGCCCCTCATGAAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CAA 72 bp | CATCTTCATGAGGGGCTCGCAGTCGTCGCGCGCGCGTaGGCACACCGACTTGCACGGCTTGATAGGGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLHEGLAVVARA*AHRLARLDRVV Trigger: CACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGACTGCGAGCCCCTCATGAAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CAA 90 bp | TTCATGAGGGGCTCGCAGTCGTCGCGCGCGCGTTGGCACACCGACTaGCACGGCTTGATAGGGTCGTGCAGGAACTCCAGGGTGCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: FMRGSQSSRARWHTD*HGLIGSCRNSRVQM Trigger: CATTTGCACCCTGGAGTTCCTGCACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGACTGCGAGCCCCTCATGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CAA 72 bp | TCGTCGCGCGCGCGTTGGCACACCGACTTGCACGGCTaGATAGGGTCGTGCAGGAACTCCAGGGTGCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SSRARWHTDLHG*IGSCRNSRVQM Trigger: CATTTGCACCCTGGAGTTCCTGCACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CAA 90 bp | GTGGTTGTACATCTTCATGAGGGGCTCGCAGTCGTCGCGCGCGCGTaGGCACACCGACTTGCACGGCTTGATAGGGTCGTGCAGGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: VVVHLHEGLAVVARA*AHRLARLDRVVQEL Trigger: GAGTTCCTGCACGACCCTATCAAGCCGTGCAAGTCGGTGTGCCAACGCGCGCGCGACGACTGCGAGCCCCTCATGAAGATGTACAACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS CCA 72 bp | ATCTTTCGCTGTCCCTTCGCCGAGGAAGAAATCCTCTaGGGCGCAGGAGAGTTTCTTCCCCCAAACTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: IFRCPFAEEEIL*GAGEFLPPNSS Trigger: ACTGGAGTTTGGGGGAAGAAACTCTCCTGCGCCCCAGAGGATTTCTTCCTCGGCGAAGGGACAGCGAAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436072.7 |
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| CDS TCA 72 bp | GGACACTGGCAAGAAGAATTTGTAATGAGCGGGACTTaGGTTCGAGGGATGGGTGATGAGGACTTGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: GHWQEEFVMSGT*VRGMGDEDLKI Trigger: GATCTTCAAGTCCTCATCACCCATCCCTCGAACTCAAGTCCCGCTCATTACAAATTCTTCTTGCCAGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436072.7 ENST00000447200.2 |
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| CDS GCA 72 bp | TATCTGACTCTCTCTCCAGTGTTTGCAGCAGCGGTCTaGTCTCAATTATCTGATGCCTCTAAGAAGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: YLTLSPVFAAAV*SQLSDASKKSC Trigger: ACAACTCTTCTTAGAGGCATCAGATAATTGAGAGCAGACCGCTGCTGCAAACACTGGAGAGAGAGTCAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447200.2 |
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| CDS CAA 90 bp | CTTAACATCTTTGGCAGGAATATCAGGGATAATACTCTGTTCCAATaGCATCCTGATGTTCACTTTGATCACCTGATTGACTGTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LNIFGRNIRDNTLFQ*HPDVHFDHLIDCCL Trigger: CAGACAACAGTCAATCAGGTGATCAAAGTGAACATCAGGATGCAATTGGAACAGAGTATTATCCCTGATATTCCTGCCAAAGATGTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447200.2 |
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| CDS CAA 72 bp | TTTGGCAGGAATATCAGGGATAATACTCTGTTCCAATaGCATCCTGATGTTCACTTTGATCACCTGATTGAC | + |
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Preference number: 6 (lower is better) Translates to: FGRNIRDNTLFQ*HPDVHFDHLID Trigger: GTCAATCAGGTGATCAAAGTGAACATCAGGATGCAATTGGAACAGAGTATTATCCCTGATATTCCTGCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447200.2 |
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