Pregenerated sensors for SFR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000156384Ensembl transcript IDs: ENST00000369727.4, ENST00000369729.7
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAACGCAATTGGCCAGATTaGCTGACGCGCGAGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKRNWPD*LTREAP Trigger: CGGCGCCTCGCGCGTCAGGCAATCTGGCCAATTGCG...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAACGTAAATCGATCCTGTaGCAGGGGCGGGGCCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKRKSIL*QGRGRA Trigger: CGCACGGCCCCGCCCCTGCCACAGGATCGATTTACG...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAAGGCGGTGGATCACCTaGGGTCAGGAGTTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKRRWIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCACCGCCT...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369727.4 ENST00000369729.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAACCGAGAGGCAGAGGTTaGAGTGAGTCAAGATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKPRGRG*SESRSH Trigger: GTGCGATCTTGACTCACTGCAACCTCTGCCTCTCGG...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369727.4 ENST00000369729.7 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAACACTCCAGCCAGGATaGCAAGAGCGAAACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKTLQPG*QERNSV Trigger: GACTGAGTTTCGCTCTTGTCATCCTGGCTGGAGTGT...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369727.4 ENST00000369729.7 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAGCCTGGCCAACGTGGTaGAACCCAGTCTCTACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKAWPTW*NPVSTK Trigger: TTTAGTAGAGACTGGGTTTCACCACGTTGGCCAGGC...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369727.4 ENST00000369729.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAGGTAGGCGGAAAAGATaGGCAATTGGCCAGATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKGRRKR*AIGQIA Trigger: GGCAATCTGGCCAATTGCGCATCTTTTCCGCCTACC...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAGAAAAGATGCGCAATTaGCCAGATTGCCTGACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKEKMRN*PDCLTR Trigger: GCGCGTCAGGCAATCTGGCCAATTGCGCATCTTTTC...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAATCTTGGTTTTTCTCTaGGGCCGTAAATCGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKILVFL*GRKSIL Trigger: CAGGATCGATTTACGGCCGCAGAGAAAAACCAAGAT...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAATTGAAAGTGAAATCTTaGTTTTTCTCTGCGGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSESRSHHHTPARMTRAKLKVKS*FFSAAV Trigger: TACGGCCGCAGAGAAAAACCAAGATTTCACTTTCAA...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR CAA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAGCGCAATTGGCCAGATaGCCTGACGCGCGAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSESRSHHHTPARMTRAKAQLAR*PDARGA Trigger: GGCGCCTCGCGCGTCAGGCAATCTGGCCAATTGCGC...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369729.7 |
||
| CDS-3UTR CAA 90 bp | TGCAGTGAGTCAAGATCGCACCATCACACTCCAGCCAGGATGACAAGAGCGAAAGCTGAGGCAGGAGAATaGCTGGAACCCGAGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSESRSHHHTPARMTRAKAEAGE*LEPERQ Trigger: CTGCCTCTCGGGTTCCAGCAATTCTCCTGCCTCAGC...TTTCGCTCTTGTCATCCTGGCTGGAGTGTGATGGTGCGATCTTGACTCACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369727.4 ENST00000369729.7 |
||