Pregenerated sensors for SFN (Homo sapiens)
Ensembl gene IDs: ENSG00000175793Ensembl transcript IDs: ENST00000339276.6
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATGGTGCGCTCAACAGCTaGAAGAAGAGTGGGATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LQPLPLSSSQPQGGTLLNGALNS*KKSGIP Trigger: GGGGATCCCACTCTTCTTGCAGCTGTTGAGCGCACC...ATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCAGGGGAGAAGTAGCCTaGTCCTGGGGTCGGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RGNMVTPSRHAFPQSRSCRGEVA*SWGREE Trigger: TTCCTCCCGACCCCAGGACCAGGCTACTTCTCCCCT...GCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCGCGCGCGCACACTCTCCACGGAGCCCTTaGGAGCAAGAACAGCGCCTA | + |
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Preference number: 3 (lower is better) Translates to: PSRHAFPQSRSCTGARAHSPRSP*EQEQRL Trigger: TAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGA...GTGTGCGCGCGCGCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | CCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTACGGGGCGGCGGGCTAACTaGTGCCTGGGACCAATGCCG | + |
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Preference number: 4 (lower is better) Translates to: PCHCPVLSHKAGHSSIPTGRRAN*CLGPMP Trigger: CGGCATTGGTCCCAGGCAGCAGTTAGCCCGCCGCCC...CGTAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | CAGGTGGCCTCAGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACCCTCAATCTCGGTCTTaGACTGGCGCGCGCGCACAC | + |
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Preference number: 4 (lower is better) Translates to: QVASALPVPLHGALWSKNPQSRS*TGARAH Trigger: GTGTGCGCGCGCGCCAGTGCAAGACCGAGATTGAGG...GTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCTGAGGCCACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGGCCTCCTTGATGAGGTaGCTGTCCAGCAGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSASPSPRSPLEQEQRLGASLMR*LSSRPS Trigger: GCTGGGCCTGCTGGACAGCCACCTCATCAAGGAGGC...CCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGTCCTCGCTGAGGGTGTaGAGATCAGCCATGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SSASPSPRSPLEQEQRLGSSLRV*RSAMAS Trigger: CGAGGCCATGGCTGATCTGCACACCCTCAGCGAGGA...CCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | CTCAGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAAGGTGGCCTCAGCTCTaGCAGTCCCTCTCCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSASPSPRSPLEQEQRLRWPQL*QSLSTE Trigger: CTCCGTGGAGAGGGACTGGCAGAGCTGAGGCCACCT...TAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTACGCTCTCTCCATGGCTCTaGGGACACACAGGCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PCHCPVLSHKAGHSSIPTLSPWL*GHTGGR Trigger: CCGCCCGCCTGTGTGTCCCCAGAGCCATGGAGAGAG...CGTAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCTTGTCGTCACCGGTaGCCACCTCGGCCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LQPLPLSSSQPQGGTLLNSCRHR*PPRPGS Trigger: GCTACCTGGCCGAGGTGGCCACCGGTGACGACAAGA...ATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGCGGATGGGGTTGGTaGGCGGCATCTCCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSSASPSPRSPLEQEQRLGGWGW*AASPSC Trigger: GCAAGAAGGAGATGCCGCCCACCAACCCCATCCGCC...TAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | AGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTGGCAACACTCAGCTCTaGGGCTCCTGGGGAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SPCHCPVLSHKAGHSSIPGNTQL*GSWGAS Trigger: CGAGGCTCCCCAGGAGCCCCAGAGCTGAGTGTTGCC...AGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGGAGAAGGGAGGGGAGAAGTAGCCTaGTCCTGGGGTCGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QSLSTEPFGARTAPRGEGRGEVA*SWGREE Trigger: TTCCTCCCGACCCCAGGACCAGGCTACTTCTCCCCT...CCCTTCTCCCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGTTAGGTGCGCTCAACAGCTGCAAGAAGAGTGGGATCCCCAGCCCCAGGTCTTGGCCAGAGAGATaGCCTCCTCGGGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QWLGALNSCKKSGIPSPRSWPER*PPRGCW Trigger: CCAACAGCCCCGAGGAGGCCATCTCTCTGGCCAAGA...CCTGGGGCTGGGGATCCCACTCTTCTTGCAGCTGTTGAGCGCACCTAACCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGGAGAAGGGTGGGGGCATGACCAGTaGTTAGGTGCGCTCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: QSLSTEPFGARTAPRGEGWGHDQ*LGALNS Trigger: GCTGTTGAGCGCACCTAACCACTGGTCATGCCCCCA...CCCTTCTCCCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCACCACGGCGCCTTTCATaGAGGCTGCCATGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ISSPCHCPVLSHKAGHSSPRRLS*RLPCPH Trigger: ATGAGGACATGGCAGCCTTCATGAAAGGCGCCGTGG...TGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR TCA 90 bp | CAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGGAGAAGGGGCATCTCCTTCTTGCTaGTGTCCATGGCCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QSLSTEPFGARTAPRGEGASPSC*CPWPPG Trigger: ACCAGGAGGCCATGGACATCAGCAAGAAGGAGATGC...CCCTTCTCCCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATGCCAGCTTGGCCTTCTaGATCAGACTGGCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LQPLPLSSSQPQGGTLLNASLAF*IRLALS Trigger: GGAGAGAGCCAGTCTGATCCAGAAGGCCAAGCTGGC...ATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATCCTCCTCGGGGCTGTTaGCGATCTCGTAGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LQPLPLSSSQPQGGTLLNPPRGC*RSRSGR Trigger: TCTTCCACTACGAGATCGCCAACAGCCCCGAGGAGG...ATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAACCGGGCTGAGTCAATaGTGCGCTTCTTGTCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: ISSPCHCPVLSHKAGHSSTGLSQ*CASCRH Trigger: GTGACGACAAGAAGCGCATCATTGACTCAGCCCGGT...TGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR TCA 90 bp | CCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTACGTGTAGGAGTCCTCGCTaGGGGTGTGCAGATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCHCPVLSHKAGHSSIPTCRSPR*GCADQP Trigger: TGGCTGATCTGCACACCCTCAGCGAGGACTCCTACA...CGTAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCCGGCGGGCTAACTGCTaGCTGGGACCAATGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGRRANC*LGPMPD Trigger: GTCCGGCATTGGTCCCAGGCAGCAGTTAGCCCGCCG...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | CAGTGGTTAGGTGCGCTCAACAGCTGCAAGAAGAGTGGGATCCCCAGCCCCAGGTGGCCTCGTCGAAAGTaGTCTTGGCCAGAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: QWLGALNSCKKSGIPSPRWPRRK*SWPERW Trigger: CCATCTCTCTGGCCAAGACCACTTTCGACGAGGCCA...CCTGGGGCTGGGGATCCCACTCTTCTTGCAGCTGTTGAGCGCACCTAACCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | GCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTACCTTCTGGATCAGACTaGCTCTCTCCATGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: APATVQFSATRRDTPQFLPSGSD*LSPWLW Trigger: CCAGAGCCATGGAGAGAGCCAGTCTGATCCAGAAGG...TAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | GCGCGCGCACACACACACACACACACACACACACACACACACCCATCTCCAGCCGCCTTTCATGAAGGCTaGCATGTCCTCATAGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: ARAHTHTHTHTHTHPSPAAFHEG*HVLIAF Trigger: GAACGCTATGAGGACATGGCAGCCTTCATGAAAGGC...GGCTGGAGATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTACCGAGCCCTCCTCGTTaGTTTTCTGCTCAATACTGG | + |
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Preference number: 4 (lower is better) Translates to: APATVQFSATRRDTPQFLPSPPR*FSAQYW Trigger: CCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGG...TAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR TCA 90 bp | CTCAGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGTTCTTATAGGCTACTaGGAGCAGGTTTCGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSSASPSPRSPLEQEQRLVLIGY*EQVSLF Trigger: GAAGAGCGAAACCTGCTCTCAGTAGCCTATAAGAAC...TAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR TCA 90 bp | AGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGACAGGGGAACTTTATTaGGAGGAAACATGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: SSASPSPRSPLEQEQRLGTGELY*EETWSH Trigger: GTGTGACCATGTTTCCTCTCAATAAAGTTCCCCTGT...CCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCGGTGCGCTCAACAGCTaGAAGAAGAGTGGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGGALNS*KKSGIP Trigger: GGGGATCCCACTCTTCTTGCAGCTGTTGAGCGCACC...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | AGAGGAAACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCGGGCTAACTGCTGCCTaGGACCAATGCCGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: RGNMVTPSRHAFPQSRSCGLTAA*DQCRTL Trigger: CAGAGTCCGGCATTGGTCCCAGGCAGCAGTTAGCCC...GCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTTTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CCA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCTGTGCAGATCAGCCATaGCCTCGTCGAAAGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGCADQP*PRRKWS Trigger: AGACCACTTTCGACGAGGCCATGGCTGATCTGCACA...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR GCA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCTCCTCGTTGCTTTTCTaGTCAATACTGGACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGSSLLF*SILDST Trigger: GGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGA...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | CTCCAGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATGCGTCCCCGGCCTCCTaGATGAGGTGGCTGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LQPLPLSSSQPQGGTLLNASPAS*MRWLSS Trigger: GCTGGACAGCCACCTCATCAAGGAGGCCGGGGACGC...ATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | AGCCCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTCCCTCTTCCCCGGCGTaGTCGGCCGTCCACAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SPCHCPVLSHKAGHSSIPPSSPA*SAVHSV Trigger: GACACTGTGGACGGCCGACAACGCCGGGGAAGAGGG...AGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS GCA 90 bp | GGTACTCACGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTTaGTTTTCTGCTCAATACTGGACAGCACCCTCCAGGCAGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GTHAPRAPSPPSPPR*FSAQYWTAPSRQPS Trigger: AGAGGGCTGCCTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCGTGAGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | AGCTCTGCCAGTCCCTCTCCACGGAGCCCTTTGGAGCAAGAACAGCGCCTAGGGTCAATGATGCGCTTCTaGTCGTCACCGGTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SSASPSPRSPLEQEQRLGSMMRF*SSPVAT Trigger: GGTGGCCACCGGTGACGACAAGAAGCGCATCATTGA...CCCTAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGAGGGACTGGCAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | CCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCGCGCGCGCACACTCGTCGAAAGTGGTCTaGGCCAGAGAGATGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSRHAFPQSRSCTGARAHSSKVV*AREMAS Trigger: GGAGGCCATCTCTCTGGCCAAGACCACTTTCGACGA...GTGTGCGCGCGCGCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCCCCTCAATCTCGGTCTaGCACTGGCGCGCGCGCACA | + |
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Preference number: 5 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGPSISV*HWRART Trigger: TGTGCGCGCGCGCCAGTGCAAGACCGAGATTGAGGG...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | CCCTGCCACTGTCCAGTTCTCAGCCACAAGGCGGGACACTCCTCAATTCCTACGTCCGAGCCCTCCTCGTaGCTTTTCTGCTCAATACTG | + |
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Preference number: 5 (lower is better) Translates to: PCHCPVLSHKAGHSSIPTSEPSS*LFCSIL Trigger: CAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGA...CGTAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGACAGTGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCGGCGGCATCTCCTTCTaGCTGATGTCCATGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGGGISF*LMSMAS Trigger: GGAGGCCATGGACATCAGCAAGAAGGAGATGCCGCC...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | AACATGGTCACACCCAGCAGACATGCTTTCCCTCAATCTCGGTCTTGCACTGGCTCTCCACGGAGCCCTTaGGAGCAAGAACAGCGCCTA | + |
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Preference number: 5 (lower is better) Translates to: NMVTPSRHAFPQSRSCTGSPRSP*EQEQRL Trigger: TAGGCGCTGTTCTTGCTCCAAAGGGCTCCGTGGAGA...GCCAGTGCAAGACCGAGATTGAGGGAAAGCATGTCTGCTGGGTGTGACCATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS-3UTR CAA 90 bp | GCGCGCGCACACACACACACACACACACACACACACACACACCCATCTCCAGCCCACAGGGGAACTTTATaGAGAGGAAACATGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: ARAHTHTHTHTHTHPSPAHRGTL*RGNMVT Trigger: TGTGACCATGTTTCCTCTCAATAAAGTTCCCCTGTG...GGCTGGAGATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS CCA 72 bp | ACCCGGCTCTCGGCGTCCCCGGCCTCCTTGATGAGGTaGCTGTCCAGCAGGCCCAGCACGGTGTCGCACACG | + |
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Preference number: 6 (lower is better) Translates to: TRLSASPASLMR*LSSRPSTVSHT Trigger: CGTGTGCGACACCGTGCTGGGCCTGCTGGACAGCCACCTCATCAAGGAGGCCGGGGACGCCGAGAGCCGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS TCA 72 bp | CCATGGCCTCCTGGTAGGCTGACCGGGCTGAGTCAATaGTGCGCTTCTTGTCGTCACCGGTGGCCACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PWPPGRLTGLSQ*CASCRHRWPPR Trigger: CCGAGGTGGCCACCGGTGACGACAAGAAGCGCATCATTGACTCAGCCCGGTCAGCCTACCAGGAGGCCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS CAA 90 bp | CGGTACTCACGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTaGCTTTTCTGCTCAATACTGGACAGCACCCTCCAGGCAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RYSRTSGPFSSEPSS*LFCSILDSTLQAAL Trigger: GAGGGCTGCCTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCGTGAGTACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS GCA 72 bp | GCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTTaGTTTTCTGCTCAATACTGGACAGCACCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: APRAPSPPSPPR*FSAQYWTAPSR Trigger: CCTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS CAA 72 bp | CGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTaGCTTTTCTGCTCAATACTGGACAGCACCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RTSGPFSSEPSS*LFCSILDSTLQ Trigger: CTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS CAA 72 bp | GTGTGCAGATCAGCCATGGCCTCGTCGAAAGTGGTCTaGGCCAGAGAGATGGCCTCCTCGGGGCTGTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: VCRSAMASSKVV*AREMASSGLLA Trigger: CGCCAACAGCCCCGAGGAGGCCATCTCTCTGGCCAAGACCACTTTCGACGAGGCCATGGCTGATCTGCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS CCA 72 bp | TGTGCAGATCAGCCATGGCCTCGTCGAAAGTGGTCTTaGCCAGAGAGATGGCCTCCTCGGGGCTGTTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: CADQPWPRRKWS*PERWPPRGCWR Trigger: TCGCCAACAGCCCCGAGGAGGCCATCTCTCTGGCCAAGACCACTTTCGACGAGGCCATGGCTGATCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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| CDS CCA 72 bp | TGGTCTTGGCCAGAGAGATGGCCTCCTCGGGGCTGTTaGCGATCTCGTAGTGGAAGACGGAAAAGTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: WSWPERWPPRGC*RSRSGRRKSSG Trigger: CCCTGAACTTTTCCGTCTTCCACTACGAGATCGCCAACAGCCCCGAGGAGGCCATCTCTCTGGCCAAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339276.6 |
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