RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SF3B3 (Homo sapiens)

Ensembl gene IDs: ENSG00000189091

Ensembl transcript IDs: ENST00000302516.10, ENST00000562722.1, ENST00000563739.5, ENST00000564899.1, ENST00000565990.2, ENST00000566095.6, ENST00000567250.5, ENST00000567635.5, ENST00000567654.1, ENST00000568291.2, ENST00000568539.1, ENST00000569687.1, ENST00000572365.1, ENST00000577085.1

Found 585 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGCGTGGGAACAGCACACATTCTGGGGACCAGCACTCTCCCTGTaGGACGAGCCTTTTCCAGCGCCGGCAGCTGTCTCACTAGCAATA +
Preference number: 1 (lower is better)
Translates to: AAWEQHTFWGPALSL*DEPFPAPAAVSLAI
Trigger: TATTGCTAGTGAGACAGCTGCCGGCGCTGGAAAAGGCTCGTCTCACAGGGAGAGTGCTGGTCCCCAGAATGTGTGCTGTTCCCACGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp TCACCCGTCCCCAAGGCAGTGGCCACACAGGTCACACACACTCTCTaGAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCATCCG +
Preference number: 1 (lower is better)
Translates to: SPVPKAVATQVTHTL*KALLENSAKALIHP
Trigger: CGGATGAATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGACCTGTGTGGCCACTGCCTTGGGGACGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp ACGCTGGAATGTTCCAGGCTAACTCCTCACCCGTCCCCAAGGCAGTaGCCACACAGGTCACACACACTCTCTGCAAGGCCCTGCTGGAAA +
Preference number: 1 (lower is better)
Translates to: TLECSRLTPHPSPRQ*PHRSHTLSARPCWK
Trigger: TTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGACCTGTGTGGCCACTGCCTTGGGGACGGGTGAGGAGTTAGCCTGGAACATTCCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp CACACAGGTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTaGCAAGGCGTTGATTCATCCGTTGGGCAGCTAGTGGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: HTGHTHSLQGPAGKL*QGVDSSVGQLVGGQ
Trigger: CTGCCCTCCCACTAGCTGCCCAACGGATGAATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGACCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp TCACTGGGGCCTCACAGAAGCCTGAACACCGCACGGTGCCCTCTCTaGGGCCTCTTGGCTTGGAATGATGCCCCTTTCTTTCAAAGCATC +
Preference number: 1 (lower is better)
Translates to: SLGPHRSLNTARCPL*GLLAWNDAPFFQSI
Trigger: GATGCTTTGAAAGAAAGGGGCATCATTCCAAGCCAAGAGGCCCCAGAGAGGGCACCGTGCGGTGTTCAGGCTTCTGTGAGGCCCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp CTGAGTATGGTGGCACACATCTGTAGTCTCCCCTACTCTGGAGGCTaGGGTGGATTGCTCGAGCCCAGGAGTTCAAGCCTCAGTGAGCTA +
Preference number: 1 (lower is better)
Translates to: LSMVAHICSLPYSGG*GGLLEPRSSSLSEL
Trigger: TAGCTCACTGAGGCTTGAACTCCTGGGCTCGAGCAATCCACCTCAGCCTCCAGAGTAGGGGAGACTACAGATGTGTGCCACCATACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp CTGGGGGTGGGGAGCCACAGAGTGCCGCAAGTCCAAGTCGGTATCTaGAAGGAAGGAGTCTACTCAGTTCTTCCTGCTCTAACTTGGGTT +
Preference number: 1 (lower is better)
Translates to: LGVGSHRVPQVQVGI*KEGVYSVLPALTWV
Trigger: AACCCAAGTTAGAGCAGGAAGAACTGAGTAGACTCCTTCCTTCCAGATACCGACTTGGACTTGCGGCACTCTGTGGCTCCCCACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp ATTTGGGAAGCTAAGGAGGATCGCTTGAGCTCAGGAGATAGAGGTTaGAGTGGGCTGAGATCGCACCACAGCCCTCTAGCCTGGTCAAGA +
Preference number: 1 (lower is better)
Translates to: IWEAKEDRLSSGDRG*SGLRSHHSPLAWSR
Trigger: TCTTGACCAGGCTAGAGGGCTGTGGTGCGATCTCAGCCCACTGCAACCTCTATCTCCTGAGCTCAAGCGATCCTCCTTAGCTTCCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp AGACGAGGGCTTCCCACACAACTAAACAGGAGGAATTCTCAGGGGTaGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGC +
Preference number: 1 (lower is better)
Translates to: RRGLPTQLNRRNSQG*AGTFLELGLFHLTG
Trigger: GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGTGGGAAGCCCTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp CCTAACAGGCTCTCATTATACCCTAAAGGCCCTCTGGAACCCACCTaGGATGGGTGCTGCAGACAGGCCCCACATATACACAGTTCTCAG +
Preference number: 1 (lower is better)
Translates to: PNRLSLYPKGPLEPT*DGCCRQAPHIHSSQ
Trigger: CTGAGAACTGTGTATATGTGGGGCCTGTCTGCAGCACCCATCTCAGGTGGGTTCCAGAGGGCCTTTAGGGTATAATGAGAGCCTGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp AGGGCTTCCCACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTaGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCTCTCA +
Preference number: 1 (lower is better)
Translates to: RASHTTKQEEFSGVG*NISGTGPLPPNRLS
Trigger: TGAGAGCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGTGGGAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp AGAAGCCTGAACACCGCACGGTGCCCTCTCTGGGGCCTCTTGGCTTaGAATGATGCCCCTTTCTTTCAAAGCATCACATATAGGACAGCA +
Preference number: 1 (lower is better)
Translates to: RSLNTARCPLWGLLA*NDAPFFQSITYRTA
Trigger: TGCTGTCCTATATGTGATGCTTTGAAAGAAAGGGGCATCATTCCAAGCCAAGAGGCCCCAGAGAGGGCACCGTGCGGTGTTCAGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp GCACCAAGGCATCATCTCCTAATAAGGAGCAGGACAAGGTCGGGGTaGTCCCCAGGAACCCAGAGTCAGTCACTTCTTCTACAGTTTCTC +
Preference number: 1 (lower is better)
Translates to: APRHHLLIRSRTRSG*SPGTQSQSLLLQFL
Trigger: GAGAAACTGTAGAAGAAGTGACTGACTCTGGGTTCCTGGGGACCACCCCGACCTTGTCCTGCTCCTTATTAGGAGATGATGCCTTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR CCA 90 bp TCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATaGAAGCAAACCCAAGGGCAGATCCCTCTGTCTGAGTTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: SVLGSKSQGLSNGTG*KQTQGQIPLSEFCS
Trigger: GCTGCAGAACTCAGACAGAGGGATCTGCCCTTGGGTTTGCTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp GGTTCAGACTGGTGTGTAGCCTACACCTGCCCATTTCAGTTCACCTaGACTTCACAGGGTGTGTTGGGCTACCAGATCACTCAAATGTCA +
Preference number: 1 (lower is better)
Translates to: GSDWCVAYTCPFQFT*TSQGVLGYQITQMS
Trigger: TGACATTTGAGTGATCTGGTAGCCCAACACACCCTGTGAAGTTCAGGTGAACTGAAATGGGCAGGTGTAGGCTACACACCAGTCTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp GTCATGTATCATGTACCAGGTGGGGAGAAGTGTAGCAAATCTCAGTaGCAATTTGAGGGGAAGCCAGTCATTCCAGGAGAAGAGCTGAGG +
Preference number: 1 (lower is better)
Translates to: VMYHVPGGEKCSKSQ*QFEGKPVIPGEELR
Trigger: CCTCAGCTCTTCTCCTGGAATGACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGGTACATGATACATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp GAGCCCAGGTCATCTGACTGTATACAGTGCTCTCTTCATGGACTTTaGTGCCTCTTGGCATTTGGCAGGTGGAATCTCGTTTCTGATTGC +
Preference number: 1 (lower is better)
Translates to: EPRSSDCIQCSLHGL*CLLAFGRWNLVSDC
Trigger: GCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTGTATACAGTCAGATGACCTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp CAGCTCTCCTCCTGTCAGGGCAATCACCACTTGTCGCTGGTTCACTaGACACTTCACAATTGTTTTCTTTCCAGGGGTCTTCCACTCATT +
Preference number: 1 (lower is better)
Translates to: QLSSCQGNHHLSLVH*TLHNCFLSRGLPLI
Trigger: AATGAGTGGAAGACCCCTGGAAAGAAAACAATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR GCA 90 bp AGTCCAAGTCGGTATCTGGAAGGAAGGAGTCTACTCAGTTCTTCCTaGTCTAACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCA +
Preference number: 1 (lower is better)
Translates to: SPSRYLEGRSLLSSS*SNLGSNLPPTSSSP
Trigger: TGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTTAGAGCAGGAAGAACTGAGTAGACTCCTTCCTTCCAGATACCGACTTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp AATTGTTTTCTTTCCAGGGGTCTTCCACTCATTGACTCTCTTGTCTaGTCGTATGTGCCGAATGCCATCTGGATAGACCTGCACCAAGGC +
Preference number: 1 (lower is better)
Translates to: NCFLSRGLPLIDSLV*SYVPNAIWIDLHQG
Trigger: GCCTTGGTGCAGGTCTATCCAGATGGCATTCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR CCA 90 bp CCACCCTTCCTCAATACCCAGTGGGAAGAGGGGTGGGTATACACATaGTTATTGAGGTCATGTTTCATCAGCACAGCAAAAAGAACCAGG +
Preference number: 1 (lower is better)
Translates to: PPFLNTQWEEGWVYT*LLRSCFISTAKRTR
Trigger: CCTGGTTCTTTTTGCTGTGCTGATGAAACATGACCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGGTATTGAGGAAGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp AGGAAGAATCAGCCACCCTTCCTCAATACCCAGTGGGAAGAGGGGTaGGTATACACATGGTTATTGAGGTCATGTTTCATCAGCACAGCA +
Preference number: 1 (lower is better)
Translates to: RKNQPPFLNTQWEEG*VYTWLLRSCFISTA
Trigger: TGCTGTGCTGATGAAACATGACCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGGTATTGAGGAAGGGTGGCTGATTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp ACAGGGTGTGTTGGGCTACCAGATCACTCAAATGTCAATCAACCATaGCCAAGCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGC +
Preference number: 1 (lower is better)
Translates to: TGCVGLPDHSNVNQP*PSRCFKSPYLVLES
Trigger: GCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATCTGGTAGCCCAACACACCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 90 bp CAGTGCTCTCTTCATGGACTTTGCTGCCTCTTGGCATTTGGCAGGTaGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTTTC +
Preference number: 1 (lower is better)
Translates to: QCSLHGLCCLLAFGR*NLVSDCFMRAALPF
Trigger: GAAAGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp CTTTGCTGCCTCTTGGCATTTGGCAGGTGGAATCTCGTTTCTGATTaGTTTATGAGGGCAGCATTGCCTTTCTCCAGTTACATCATCGAC +
Preference number: 1 (lower is better)
Translates to: LCCLLAFGRWNLVSD*FMRAALPFSSYIID
Trigger: GTCGATGATGTAACTGGAGAAAGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp CCCAGGTCATCTGACTGTATACAGTGCTCTCTTCATGGACTTTGCTaGCTCTTGGCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTT +
Preference number: 1 (lower is better)
Translates to: PRSSDCIQCSLHGLC*LLAFGRWNLVSDCF
Trigger: AAAGCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTGTATACAGTCAGATGACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp TGGACTTTGCTGCCTCTTGGCATTTGGCAGGTGGAATCTCGTTTCTaGTTGCTTTATGAGGGCAGCATTGCCTTTCTCCAGTTACATCAT +
Preference number: 1 (lower is better)
Translates to: WTLLPLGIWQVESRF*LLYEGSIAFLQLHH
Trigger: ATGATGTAACTGGAGAAAGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp CTGCACACTTCACAATTGTTTTCTTTCCAGGGGTCTTCCACTCATTaGCTCTCTTGTCTGCTCGTATGTGCCGAATGCCATCTGGATAGA +
Preference number: 1 (lower is better)
Translates to: LHTSQLFSFQGSSTH*LSCLLVCAECHLDR
Trigger: TCTATCCAGATGGCATTCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAAACAATTGTGAAGTGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR TCA 90 bp CTCAGTGCCAATTTGAGGGGAAGCCAGTCATTCCAGGAGAAGAGCTaGGGGGAAAGAGCTGTTGACTTTCATAATGCAGTCTTAATTATC +
Preference number: 1 (lower is better)
Translates to: LSANLRGSQSFQEKS*GERAVDFHNAVLII
Trigger: GATAATTAAGACTGCATTATGAAAGTCAACAGCTCTTTCCCCTCAGCTCTTCTCCTGGAATGACTGGCTTCCCCTCAAATTGGCACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 90 bp AAATCAGTCTTATTCTACCAATTTACAGGCAGGAAACCAAGACTATaGTTAGAGGCTAGTGAGCCCAGGTCATCTGACTGTATACAGTGC +
Preference number: 1 (lower is better)
Translates to: KSVLFYQFTGRKPRL*LEASEPRSSDCIQC
Trigger: GCACTGTATACAGTCAGATGACCTGGGCTCACTAGCCTCTAAGCATAGTCTTGGTTTCCTGCCTGTAAATTGGTAGAATAAGACTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp TCTGTTCTGACAAATGAAGAGGGTTCTAATATCCCACTAGGATTATaGGCCACAACTACAGGTTTCCTACCATTTCCTGACCTAAAACCC +
Preference number: 1 (lower is better)
Translates to: SVLTNEEGSNIPLGL*ATTTGFLPFPDLKP
Trigger: GGGTTTTAGGTCAGGAAATGGTAGGAAACCTGTAGTTGTGGCTCATAATCCTAGTGGGATATTAGAACCCTCTTCATTTGTCAGAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp TGCGCTTTATTCCGAGTGCCAATGCATGCCACAAGTAGTTGTTCATaGAATGTTTTCTCAATTGGATCGACAAAACTGGATTCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: CALFRVPMHATSSCS*NVFSIGSTKLDSWF
Trigger: AAACCAGGAATCCAGTTTTGTCGATCCAATTGAGAAAACATTTCATGAACAACTACTTGTGGCATGCATTGGCACTCGGAATAAAGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 90 bp ATTCTAACCCAGTGCTCACCAGATCATTTGCTCAATTTAGATGGCTaGGCACATGCAGACGAAAGAAAGTTTTACATTTGTGAAGTATTG +
Preference number: 1 (lower is better)
Translates to: ILTQCSPDHLLNLDG*AHADERKFYICEVL
Trigger: CAATACTTCACAAATGTAAAACTTTCTTTCGTCTGCATGTGCTCAGCCATCTAAATTGAGCAAATGATCTGGTGAGCACTGGGTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAAGAGAACAAGCAAGCTaGTGGGCAGACTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRREQAS*WADFQR
Trigger: CCTCTGGAAGTCTGCCCATCAGCTTGCTTGTTCTCT...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTTCCAGGAGAAGAGCTaGGGGGAAAGAGCTGTTGAC +
Preference number: 2 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRFQEKS*GERAVD
Trigger: GTCAACAGCTCTTTCCCCTCAGCTCTTCTCCTGGAA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACTTCACAGGGTGTGTTaGGCTACCAGATCACTCAAA +
Preference number: 2 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLHRVC*ATRSLK
Trigger: TTTGAGTGATCTGGTAGCCCAACACACCCTGTGAAG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGGAGTTCAAGCCTCAGTaGGCTATGATCACTCCACTG +
Preference number: 2 (lower is better)
Translates to: TPEHSVMCVCATMTPGDREFKPQ*AMITPL
Trigger: CAGTGGAGTGATCATAGCTCACTGAGGCTTGAACTC...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGAAAGAGGCGAGGAGCTaGTCAAGTATCTACGCTGAG +
Preference number: 2 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRKEARS*SSIYAE
Trigger: CTCAGCGTAGATACTTGAGCAGCTCCTCGCCTCTTT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 90 bp CCTCACAGAAGCCTGAACACCGCACGGTGCCCTCTCTGGGGCCTCTaGGCTTGGAATGATGCCCCTTTCTTTCAAAGCATCACATATAGG +
Preference number: 2 (lower is better)
Translates to: PHRSLNTARCPLWGL*AWNDAPFFQSITYR
Trigger: CCTATATGTGATGCTTTGAAAGAAAGGGGCATCATTCCAAGCCAAGAGGCCCCAGAGAGGGCACCGTGCGGTGTTCAGGCTTCTGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCATCTCAGTGCCAATTTaGGGGGAAGCCAGTCATTCC +
Preference number: 2 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGISVPI*GEASHS
Trigger: GGAATGACTGGCTTCCCCTCAAATTGGCACTGAGAT...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGCCTCTCCTTTCATTATaGGACTGCAGTCAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRPLLSL*DCSQRR
Trigger: CCTTCTCTGACTGCAGTCTCATAATGAAAGGAGAGG...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAAAAGATCGCTTTAGGTaGTGTATCAGTAAAAGGGGC +
Preference number: 2 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRKDRFR*CISKRG
Trigger: GCCCCTTTTACTGATACAGCACCTAAAGCGATCTTT...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTATGCAGGGATGGCTTTaGGGAATGGGGGACTCAGGT +
Preference number: 2 (lower is better)
Translates to: VTHTLCKALLENSAKALIMQGWL*GMGDSG
Trigger: ACCTGAGTCCCCCATTCCCCAAAGCCATCCCTGCAT...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGAACTCTTGGTTGTGCTaGTTCAGACTGGTGTGTAGC +
Preference number: 2 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRNSWLC*FRLVCS
Trigger: GCTACACACCAGTCTGAACCAGCACAACCAAGAGTT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCTCTCTGGGGCCTCTTaGCTTGGAATGATGCCCCTT +
Preference number: 2 (lower is better)
Translates to: VTHTLCKALLENSAKALILSGAS*LGMMPL
Trigger: AAGGGGCATCATTCCAAGCCAAGAGGCCCCAGAGAG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp CCTGTCAGGGCAATCACCACTTGTCGCTGGTTCACTGCACACTTCACAATTGTTAGGACAAGGTCGGGGTaGTCCCCAGGAACCCAGAGT +
Preference number: 2 (lower is better)
Translates to: PVRAITTCRWFTAHFTIVRTRSG*SPGTQS
Trigger: ACTCTGGGTTCCTGGGGACCACCCCGACCTTGTCCT...AACAATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR-3UTR TCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACTGCAGCAACAACTATaGAAATTCCTTTCCACATAT +
Preference number: 2 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLQQQL*KFLSTY
Trigger: ATATGTGGAAAGGAATTTTCATAGTTGTTGCTGCAG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCAGCCCCCTAATTACTaGGACTACAAGTGTGCACCA +
Preference number: 2 (lower is better)
Translates to: VTHTLCKALLENSAKALIQPPNY*DYKCAP
Trigger: TGGTGCACACTTGTAGTCCCAGTAATTAGGGGGCTG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTGCAGATCCCTCTGTCTaGGTTCTGCAGCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPADPSV*VLQQPL
Trigger: CAGAGGCTGCTGCAGAACTCAGACAGAGGGATCTGC...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCCTACTCAGTTCTTCCTaGTCTAACTTGGGTTCAAAC +
Preference number: 2 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGLLSSS*SNLGSN
Trigger: GTTTGAACCCAAGTTAGAGCAGGAAGAACTGAGTAG...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTGGGGAGCCACAGAGTaGCGCAAGTCCAAGTCGGTA +
Preference number: 2 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKWGATE*RKSKSV
Trigger: TACCGACTTGGACTTGCGGCACTCTGTGGCTCCCCA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTGTGGTTCATGGTAGGTaGCCAGTAAACGTTTGTGGA +
Preference number: 2 (lower is better)
Translates to: VTHTLCKALLENSAKALIVVHGR*PVNVCG
Trigger: TCCACAAACGTTTACTGGGCACCTACCATGAACCAC...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp AAGGATCCATCTCGAAATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCACTTGGGTCTTCCACTCATTaGCTCTCTTGTCTGCTCGTA +
Preference number: 2 (lower is better)
Translates to: KDPSRNRPALLLSGQSPLGSSTH*LSCLLV
Trigger: TACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCC...AAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR-3UTR GCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGATCCAGTCACCCTCCTaGCACATGGCAGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRIQSPS*HMAEAR
Trigger: CCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGAT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCTGATCCCATCTGAATaGCTTTCTGGCTTTCCTCTA +
Preference number: 2 (lower is better)
Translates to: VTHTLCKALLENSAKALILIPSE*LSGFPL
Trigger: TAGAGGAAAGCCAGAAAGGCATTCAGATGGGATCAG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGAAAACACACAGTCTCTaGCAAGCCCCACCGGGAAAG +
Preference number: 2 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWKTHSL*QAPPGK
Trigger: CTTTCCCGGTGGGGCTTGCCAGAGACTGTGTGTTTT...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTTTTTGGACCAGGTTTaGTTTCAGCAGCAGAGATGT +
Preference number: 2 (lower is better)
Translates to: VTHTLCKALLENSAKALIFLDQV*FQQQRC
Trigger: ACATCTCTGCTGCTGAAATCAAACCTGGTCCAAAAA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGGCCTCTGATGGGTTTTaGCAAAGCTGGAGAGAGGTC +
Preference number: 2 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKASDGF*QSWREV
Trigger: GACCTCTCTCCAGCTTTGGCAAAACCCATCAGAGGC...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTAGCAATGGAACAGGATaGAAGCAAACCCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPSNGTG*KQTQGQ
Trigger: CTGCCCTTGGGTTTGCTTCCATCCTGTTCCATTGCT...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTATATCAATGCAGGGATaGCTTTGGGGAATGGGGGAC +
Preference number: 2 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPISMQG*LWGMGD
Trigger: GTCCCCCATTCCCCAAAGCCATCCCTGCATTGATAT...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATGAACAGCACACATTCTaGGGACCAGCACTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYEQHTF*GPALSL
Trigger: CAGGGAGAGTGCTGGTCCCCAGAATGTGTGCTGTTC...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTAGTGGAACTCAGGAGTaGTACTATACCCTACCCAGT +
Preference number: 2 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPSGTQE*YYTLPS
Trigger: ACTGGGTAGGGTATAGTATCACTCCTGAGTTCCACT...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTCTCAATTTAGATGGCTaGGCACATGCAGACGAAAGA +
Preference number: 2 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPLNLDG*AHADER
Trigger: TCTTTCGTCTGCATGTGCTCAGCCATCTAAATTGAG...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTGTCAAGACATATCAATaGAGGGATGGCTTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPVKTYQ*RDGFGE
Trigger: TTCCCCAAAGCCATCCCTGCATTGATATGTCTTGAC...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp CTGAAGGATCCATCTCGAAATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCATTGTCGCTGGTTCACTaGACACTTCACAATTGTTTT +
Preference number: 2 (lower is better)
Translates to: LKDPSRNRPALLLSGQSPLSLVH*TLHNCF
Trigger: AAAACAATTGTGAAGTGTGCAGTGAACCAGCGACAA...TGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGATCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR CAA 90 bp TTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATaGCCTTTCTCCAGTTACATCATCGACTCCCTAAAGCTGAGATTC +
Preference number: 2 (lower is better)
Translates to: FGRWNLVSDCFMRAA*PFSSYIIDSLKLRF
Trigger: GAATCTCAGCTTTAGGGAGTCGATGATGTAACTGGAGAAAGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 90 bp TCATCTGACTGTATACAGTGCTCTCTTCATGGACTTTGCTGCCTCTaGGCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGG +
Preference number: 2 (lower is better)
Translates to: SSDCIQCSLHGLCCL*AFGRWNLVSDCFMR
Trigger: CCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTGTATACAGTCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp AAGGATCCATCTCGAAATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCACTTTCACGAAAGACACAATaGTGTAGGCATCAAACTCAT +
Preference number: 2 (lower is better)
Translates to: KDPSRNRPALLLSGQSPLSRKTQ*CRHQTH
Trigger: ATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGA...AAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTCTGATTCTAACCCAGTaGTCACCAGATCATTTGCTC +
Preference number: 2 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPLILTQ*SPDHLL
Trigger: GAGCAAATGATCTGGTGAGCACTGGGTTAGAATCAG...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTTCCAAAGGAAACATCTaGAGAACCTCTGCCAGTAAG +
Preference number: 2 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPSKGNI*RTSASK
Trigger: CTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGA...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTTCTACACTGGAACCTaGGGTCATGTATCATGTACC +
Preference number: 2 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKFYTGT*GHVSCT
Trigger: GGTACATGATACATGACCCCAGGTTCCAGTGTAGAA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGACTCAGGTTCTACACTaGAACCTGGGGTCATGTATC +
Preference number: 2 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRTQVLH*NLGSCI
Trigger: GATACATGACCCCAGGTTCCAGTGTAGAACCTGAGT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTTCCTCAATACCCAGTaGGAAGAGGGGTGGGTATAC +
Preference number: 2 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLFLNTQ*EEGWVY
Trigger: GTATACCCACCCCTCTTCCCACTGGGTATTGAGGAA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTGCAAGTTCTGCTGAGTaGACCTGGGAATTTAAAACT +
Preference number: 2 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPASSAE*TWEFKT
Trigger: AGTTTTAAATTCCCAGGTCCACTCAGCAGAACTTGC...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTCTGTTCTGGGCTCTaGGAGGTTCAGATTGTATTC +
Preference number: 2 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYLCSGL*EVQIVF
Trigger: GAATACAATCTGAACCTCTCAGAGCCCAGAACAGAG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTGATGGGACTTGTCATTaGGTCACATCCAATCTAATT +
Preference number: 2 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPDGTCH*VTSNLI
Trigger: AATTAGATTGGATGTGACTCAATGACAAGTCCCATC...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGGGGTGGGTATACACATaGTTATTGAGGTCATGTTTC +
Preference number: 2 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKGWVYT*LLRSCF
Trigger: GAAACATGACCTCAATAACCATGTGTATACCCACCC...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCAGTGGGAAGAGGGGTaGGTATACACATGGTTATTG +
Preference number: 2 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYQWEEG*VYTWLL
Trigger: CAATAACCATGTGTATACCCACCCCTCTTCCCACTG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTAGGTCTCTATTTACCTaGTTGCTCAATCAAACCACA +
Preference number: 2 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPRSLFT*LLNQTT
Trigger: TGTGGTTTGATTGAGCAACCAGGTAAATAGAGACCT...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCAAAATTAAGGGTGTGTaGAAAAGTAGACAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: LGKRSSKGNICRTSASKVKIKGV*KSRQES
Trigger: ACTCTCCTGTCTACTTTTGCACACACCCTTAATTTT...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTAGTTCCTCAGATGACTaGATGTCAGTATCACACAAT +
Preference number: 2 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPSSSDD*MSVSHN
Trigger: ATTGTGTGATACTGACATGCAGTCATCTGAGGAACT...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR GCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTCTATTTACCTGGTTaGTCAATCAAACCACAGGAG +
Preference number: 2 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYLYLPG*SIKPQE
Trigger: CTCCTGTGGTTTGATTGAGCAACCAGGTAAATAGAG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR TCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGTATACACATGGTTATTaGGGTCATGTTTCATCAGCA +
Preference number: 2 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRYTHGY*GHVSSA
Trigger: TGCTGATGAAACATGACCTCAATAACCATGTGTATA...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp AGAGTGAGAGGTGGGAAACTGAAGGGGGCTTGCCTCTaGGCACCGCCAGAGATGCTGCATACGGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: RVRGGKLKGACL*APPEMLHTGVG
Trigger: CCCCACCCCCGTATGCAGCATCTCTGGCGGTGCCCAGAGGCAAGCCCCCTTCAGTTTCCCACCTCTCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp TCACTGGGGCCTCACAGAAGCCTGAACACCGCACGGTaGCCTCTCTGGGGCCTCTTGGCTTGGAATGATGCC +
Preference number: 3 (lower is better)
Translates to: SLGPHRSLNTAR*PLWGLLAWNDA
Trigger: GGCATCATTCCAAGCCAAGAGGCCCCAGAGAGGGCACCGTGCGGTGTTCAGGCTTCTGTGAGGCCCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp GAACAGCACACATTCTGGGGACCAGCACTCTCCCTGTaGGACGAGCCTTTTCCAGCGCCGGCAGCTGTCTCA +
Preference number: 3 (lower is better)
Translates to: EQHTFWGPALSL*DEPFPAPAAVS
Trigger: TGAGACAGCTGCCGGCGCTGGAAAAGGCTCGTCTCACAGGGAGAGTGCTGGTCCCCAGAATGTGTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp AAACCACCACAGACCTGGGGGTGGGGAGCCACAGAGTaGCGCAAGTCCAAGTCGGTATCTGGAAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: KPPQTWGWGATE*RKSKSVSGRKE
Trigger: CTCCTTCCTTCCAGATACCGACTTGGACTTGCGGCACTCTGTGGCTCCCCACCCCCAGGTCTGTGGTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGAATGCAGGGATGGCTTaGGGGAATGGGGGACTCAGG +
Preference number: 3 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRNAGMA*GNGGLR
Trigger: CCTGAGTCCCCCATTCCCCAAAGCCATCCCTGCATT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp GTGGCACACATCTGTAGTCTCCCCTACTCTGGAGGCTaGGGTGGATTGCTCGAGCCCAGGAGTTCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: VAHICSLPYSGG*GGLLEPRSSSL
Trigger: GAGGCTTGAACTCCTGGGCTCGAGCAATCCACCTCAGCCTCCAGAGTAGGGGAGACTACAGATGTGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp CAGAGCCCCAGGTCAGCGGACAAGCCTCAGAACCCCTaGGCACTCAGTCATGTGCGTTTGTGCTACCATGAC +
Preference number: 3 (lower is better)
Translates to: QSPRSADKPQNP*ALSHVRLCYHD
Trigger: GTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGTTCTGAGGCTTGTCCGCTGACCTGGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp TCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTaGTTCATCCGTTGGGCAGCTAGTGGGAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: SARPCWKTLPRR*FIRWAASGRAE
Trigger: CTCTGCCCTCCCACTAGCTGCCCAACGGATGAATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp GACTCACCTCACCACCAACCTCACAGCGACAGAGACTaGCTGGTTATAAACTCTCCTCCAACCTCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: DSPHHQPHSDRD*LVINSPPTSGC
Trigger: GCACCCAGAGGTTGGAGGAGAGTTTATAACCAGGCAGTCTCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp CACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTaGCAAGGCGTTGATTCATCCGTTGGGCAGCTAGTG +
Preference number: 3 (lower is better)
Translates to: HTHSLQGPAGKL*QGVDSSVGQLV
Trigger: CACTAGCTGCCCAACGGATGAATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GGCTTTCCTCTAACAAGCTCAAGAAAGGCAGCAGCGTaGGAACAGCACACATTCTGGGGACCAGCACTCTCC +
Preference number: 3 (lower is better)
Translates to: GFPLTSSRKAAA*EQHTFWGPALS
Trigger: GGAGAGTGCTGGTCCCCAGAATGTGTGCTGTTCCCACGCTGCTGCCTTTCTTGAGCTTGTTAGAGGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GGGAGCCACAGAGTGCCGCAAGTCCAAGTCGGTATCTaGAAGGAAGGAGTCTACTCAGTTCTTCCTGCTCTA +
Preference number: 3 (lower is better)
Translates to: GSHRVPQVQVGI*KEGVYSVLPAL
Trigger: TAGAGCAGGAAGAACTGAGTAGACTCCTTCCTTCCAGATACCGACTTGGACTTGCGGCACTCTGTGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp GCAGAACAGAGCTGGGAGGTGGTGGTTCATGGTAGGTaGCCAGTAAACGTTTGTGGAAGAAATGAGCGTAGC +
Preference number: 3 (lower is better)
Translates to: AEQSWEVVVHGR*PVNVCGRNERS
Trigger: GCTACGCTCATTTCTTCCACAAACGTTTACTGGGCACCTACCATGAACCACCACCTCCCAGCTCTGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp CTTCCCACACAACTAAACAGGAGGAATTCTCAGGGGTaGGCTGGAACATTTCTGGAACTGGGCCTCTTCCAC +
Preference number: 3 (lower is better)
Translates to: LPTQLNRRNSQG*AGTFLELGLFH
Trigger: GTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATaGAAGCAAACCCAAGGGCAGATCCCTCTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: GSKSQGLSNGTG*KQTQGQIPLSE
Trigger: CTCAGACAGAGGGATCTGCCCTTGGGTTTGCTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp CATCATCTCCTAATAAGGAGCAGGACAAGGTCGGGGTaGTCCCCAGGAACCCAGAGTCAGTCACTTCTTCTA +
Preference number: 3 (lower is better)
Translates to: HHLLIRSRTRSG*SPGTQSQSLLL
Trigger: TAGAAGAAGTGACTGACTCTGGGTTCCTGGGGACCACCCCGACCTTGTCCTGCTCCTTATTAGGAGATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR-3UTR CAA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTAATCTCAGTGCCAATTaGAGGGGAAGCCAGTCATTC +
Preference number: 3 (lower is better)
Translates to: VTHTLCKALLENSAKALINLSAN*RGSQSF
Trigger: GAATGACTGGCTTCCCCTCAAATTGGCACTGAGATT...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp CTTTCCAGGGGTCTTCCACTCATTGACTCTCTTGTCTaGTCGTATGTGCCGAATGCCATCTGGATAGACCTG +
Preference number: 3 (lower is better)
Translates to: LSRGLPLIDSLV*SYVPNAIWIDL
Trigger: CAGGTCTATCCAGATGGCATTCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR CCA 72 bp CAGGAGAGTCAAGACATATCAATGCAGGGATGGCTTTaGGGAATGGGGGACTCAGGTTCTACACTGGAACCT +
Preference number: 3 (lower is better)
Translates to: QESQDISMQGWL*GMGDSGSTLEP
Trigger: AGGTTCCAGTGTAGAACCTGAGTCCCCCATTCCCCAAAGCCATCCCTGCATTGATATGTCTTGACTCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp AGGAGGAAGAATCAGCCACCCTTCCTCAATACCCAGTaGGAAGAGGGGTGGGTATACACATGGTTATTGAGG +
Preference number: 3 (lower is better)
Translates to: RRKNQPPFLNTQ*EEGWVYTWLLR
Trigger: CCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGGTATTGAGGAAGGGTGGCTGATTCTTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp CACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTaGAACATTTCTGGAACTGGGCCTCTTCCACCTAAC +
Preference number: 3 (lower is better)
Translates to: HTTKQEEFSGVG*NISGTGPLPPN
Trigger: GTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp GAGGCTAGTGAGCCCAGGTCATCTGACTGTATACAGTaGTCTCTTCATGGACTTTGCTGCCTCTTGGCATTT +
Preference number: 3 (lower is better)
Translates to: EASEPRSSDCIQ*SLHGLCCLLAF
Trigger: AAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTGTATACAGTCAGATGACCTGGGCTCACTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp CAGCCACCCTTCCTCAATACCCAGTGGGAAGAGGGGTaGGTATACACATGGTTATTGAGGTCATGTTTCATC +
Preference number: 3 (lower is better)
Translates to: QPPFLNTQWEEG*VYTWLLRSCFI
Trigger: GATGAAACATGACCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGGTATTGAGGAAGGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp TGCAGTGGGCTGAGATCGCACCACAGCCCTCTAGCCTaGTCAAGAGAGAGAGATTCCATCTCTAATAAACAA +
Preference number: 3 (lower is better)
Translates to: CSGLRSHHSPLA*SRERDSISNKQ
Trigger: TTGTTTATTAGAGATGGAATCTCTCTCTCTTGACCAGGCTAGAGGGCTGTGGTGCGATCTCAGCCCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CAA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTCCTGAAGTCCCAAGGTaGTGGCTGAGGAAATCAGAT +
Preference number: 3 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPPEVPR*WLRKSD
Trigger: ATCTGATTTCCTCAGCCACAACCTTGGGACTTCAGG...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CAA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTAAGCAGCAATGTTCATaGTCCATCACAGCTACTGAT +
Preference number: 3 (lower is better)
Translates to: VTHTLCKALLENSAKALIKQQCS*SITATD
Trigger: ATCAGTAGCTGTGATGGACAATGAACATTGCTGCTT...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp TCCTGTCAGGGCAATCACCACTTGTCGCTGGTTCACTaGACACTTCACAATTGTTTTCTTTCCAGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: SCQGNHHLSLVH*TLHNCFLSRGL
Trigger: AAGACCCCTGGAAAGAAAACAATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTGACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR TCA 72 bp AATTTGAGGGGAAGCCAGTCATTCCAGGAGAAGAGCTaGGGGGAAAGAGCTGTTGACTTTCATAATGCAGTC +
Preference number: 3 (lower is better)
Translates to: NLRGSQSFQEKS*GERAVDFHNAV
Trigger: GACTGCATTATGAAAGTCAACAGCTCTTTCCCCTCAGCTCTTCTCCTGGAATGACTGGCTTCCCCTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp CCCAGTGGGAAGAGGGGTGGGTATACACATGGTTATTaGGGTCATGTTTCATCAGCACAGCAAAAAGAACCA +
Preference number: 3 (lower is better)
Translates to: PSGKRGGYTHGY*GHVSSAQQKEP
Trigger: TGGTTCTTTTTGCTGTGCTGATGAAACATGACCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GGTTTTGCCAAAGCTGGAGAGAGGTCTCTATTTACCTaGTTGCTCAATCAAACCACAGGAGTCAATCAGGTC +
Preference number: 3 (lower is better)
Translates to: GFAKAGERSLFT*LLNQTTGVNQV
Trigger: GACCTGATTGACTCCTGTGGTTTGATTGAGCAACCAGGTAAATAGAGACCTCTCTCCAGCTTTGGCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GCCCATTTCAGTTCACCTGAACTTCACAGGGTGTGTTaGGCTACCAGATCACTCAAATGTCAATCAACCATG +
Preference number: 3 (lower is better)
Translates to: AHFSSPELHRVC*ATRSLKCQSTM
Trigger: CATGGTTGATTGACATTTGAGTGATCTGGTAGCCCAACACACCCTGTGAAGTTCAGGTGAACTGAAATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GTATACAGTGCTCTCTTCATGGACTTTGCTGCCTCTTaGCATTTGGCAGGTGGAATCTCGTTTCTGATTGCT +
Preference number: 3 (lower is better)
Translates to: VYSALFMDFAAS*HLAGGISFLIA
Trigger: AGCAATCAGAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTGTATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp CATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATaGGGGCAGCATTGCCTTTCTCCAGTTACATCATCG +
Preference number: 3 (lower is better)
Translates to: HLAGGISFLIAL*GQHCLSPVTSS
Trigger: CGATGATGTAACTGGAGAAAGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp AATTGGATCGACAAAACTGGATTCCTGGTTTTGCCCTaGACTTGCAACAGGACAATAATGCCCACGCTGGAA +
Preference number: 3 (lower is better)
Translates to: NWIDKTGFLVLP*TCNRTIMPTLE
Trigger: TTCCAGCGTGGGCATTATTGTCCTGTTGCAAGTTCAGGGCAAAACCAGGAATCCAGTTTTGTCGATCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp TCACAATTGTTTTCTTTCCAGGGGTCTTCCACTCATTaGCTCTCTTGTCTGCTCGTATGTGCCGAATGCCAT +
Preference number: 3 (lower is better)
Translates to: SQLFSFQGSSTH*LSCLLVCAECH
Trigger: ATGGCATTCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAAACAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
3UTR CCA 72 bp CTCAATACCCAGTGGGAAGAGGGGTGGGTATACACATaGTTATTGAGGTCATGTTTCATCAGCACAGCAAAA +
Preference number: 3 (lower is better)
Translates to: LNTQWEEGWVYT*LLRSCFISTAK
Trigger: TTTTGCTGTGCTGATGAAACATGACCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGGTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CCA 72 bp GTTGGGCTACCAGATCACTCAAATGTCAATCAACCATaGCCAAGCAGGTGTTTTAAGAGTCCCTATCTTGTC +
Preference number: 3 (lower is better)
Translates to: VGLPDHSNVNQP*PSRCFKSPYLV
Trigger: GACAAGATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATCTGGTAGCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CAA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCAGATGGGACTTGTCATaGAGTCACATCCAATCTAAT +
Preference number: 3 (lower is better)
Translates to: LGKRSSKGNICRTSASKVRWDLS*SHIQSN
Trigger: ATTAGATTGGATGTGACTCAATGACAAGTCCCATCT...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp CTTCATTTTTCAGACTTGGGACCTTCTGATTTTTCCTaGAGTCCCAAGGTTGTGGCTGAGGAAATCAGATGC +
Preference number: 3 (lower is better)
Translates to: LHFSDLGPSDFS*SPKVVAEEIRC
Trigger: GCATCTGATTTCCTCAGCCACAACCTTGGGACTTCAGGAAAAATCAGAAGGTCCCAAGTCTGAAAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp TTATTCTACCAATTTACAGGCAGGAAACCAAGACTATaGTTAGAGGCTAGTGAGCCCAGGTCATCTGACTGT +
Preference number: 3 (lower is better)
Translates to: LFYQFTGRKPRL*LEASEPRSSDC
Trigger: ACAGTCAGATGACCTGGGCTCACTAGCCTCTAAGCATAGTCTTGGTTTCCTGCCTGTAAATTGGTAGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGGTATACACATGGTTATaGAGGTCATGTTTCATCAGC +
Preference number: 3 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKVYTWL*RSCFIS
Trigger: GCTGATGAAACATGACCTCAATAACCATGTGTATAC...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp ACAAATGAAGAGGGTTCTAATATCCCACTAGGATTATaGGCCACAACTACAGGTTTCCTACCATTTCCTGAC +
Preference number: 3 (lower is better)
Translates to: TNEEGSNIPLGL*ATTTGFLPFPD
Trigger: GTCAGGAAATGGTAGGAAACCTGTAGTTGTGGCTCATAATCCTAGTGGGATATTAGAACCCTCTTCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR GCA 72 bp GCTGCTCAAGTATCTACGCTGAGTTCCTCAGATGACTaGATGTCAGTATCACACAATTTGATAGAATGGATT +
Preference number: 3 (lower is better)
Translates to: AAQVSTLSSSDD*MSVSHNLIEWI
Trigger: AATCCATTCTATCAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTGAGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp CAGTGCTCACCAGATCATTTGCTCAATTTAGATGGCTaGGCACATGCAGACGAAAGAAAGTTTTACATTTGT +
Preference number: 3 (lower is better)
Translates to: QCSPDHLLNLDG*AHADERKFYIC
Trigger: ACAAATGTAAAACTTTCTTTCGTCTGCATGTGCTCAGCCATCTAAATTGAGCAAATGATCTGGTGAGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR TCA 72 bp TTCCGAGTGCCAATGCATGCCACAAGTAGTTGTTCATaGAATGTTTTCTCAATTGGATCGACAAAACTGGAT +
Preference number: 3 (lower is better)
Translates to: FRVPMHATSSCS*NVFSIGSTKLD
Trigger: ATCCAGTTTTGTCGATCCAATTGAGAAAACATTTCATGAACAACTACTTGTGGCATGCATTGGCACTCGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAGGAACCCACCTGAGATaGGTGCTGCAGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRGTHLR*VLQTGP
Trigger: GGGGCCTGTCTGCAGCACCCATCTCAGGTGGGTTCC...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACACAAGGACTCAGGCTaGGCTGGGAGAGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRHKDSG*AGRACM
Trigger: CATGCAGGCTCTCCCAGCCCAGCCTGAGTCCTTGTG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCCCACAGACCTGGGGGTaGGGAGCCACAGAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGPQTWG*GATECR
Trigger: GCGGCACTCTGTGGCTCCCCACCCCCAGGTCTGTGG...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAGCACGGTGCCCTCTCTaGGGCCTCTTGGCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRARCPL*GLLAWN
Trigger: ATTCCAAGCCAAGAGGCCCCAGAGAGGGCACCGTGC...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGGCCTCACAGAAGCCTaGACACCGCACGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGGLTEA*TPHGAL
Trigger: GAGGGCACCGTGCGGTGTTCAGGCTTCTGTGAGGCC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAATCACAGAGGCCCACTaGCCATTGCCAGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRITEAH*PLPALG
Trigger: TCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGAT...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAGCCAATACTGCCTCCTaGCCTTGCATTCGGACTCGG +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRANTAS*PCIRTR
Trigger: CCGAGTCCGAATGCAAGGCCAGGAGGCAGTATTGGC...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGGAGCGAAAGCTGAGGTaGTCCCGCCCACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRERKLR*SRPQRG
Trigger: CCCTCTCTGTGGGCGGGACCACCTCAGCTTTCGCTC...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACTCCAGGGATCAGCGTaGTCTTCTGCAAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLQGSA*SSARTA
Trigger: TGCTGTCCTTGCAGAAGACCACGCTGATCCCTGGAG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATTCATTGAGGAATGCTaGTGCCATCTCTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRFIEEC*CHLCGQ
Trigger: CTGGCCGCAGAGATGGCAGCAGCATTCCTCAATGAA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAGCCTCTGATGGGTTTTaGCAAAGCTGGAGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRASDGF*QSWREV
Trigger: GACCTCTCTCCAGCTTTGGCAAAACCCATCAGAGGC...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCACCGCCAGAGATGCTaGATACGGGGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVHRQRC*IRGWGG
Trigger: CCCACCCCACCCCCGTATGCAGCATCTCTGGCGGTG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACCAACTCCAACATACTaGCGTCCGCCATTAGACCTC +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRPTPTY*RPPLDL
Trigger: GAGGTCTAATGGCGGACGCCAGTATGTTGGAGTTGG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGGCTTCCAGGGGAGATaGAATGGTAAGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGGFQGR*NGKSGC
Trigger: GCAGCCCGACTTACCATTTCATCTCCCCTGGAAGCC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGACTCATAGGCTGAAGTaGTCCTCCTGTCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRTHRLK*SSCLSP
Trigger: GGGGCTGAGACAGGAGGATCACTTCAGCCTATGAGT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGAAGCCTCAGAACCCCTaGGCACTCAGTCATGTGCGT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRKPQNP*ALSHVR
Trigger: ACGCACATGACTGAGTGCTCAGGGGTTCTGAGGCTT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCTGAACACCGCACGGTaGCCTCTCTGGGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVLNTAR*PLWGLL
Trigger: CAAGAGGCCCCAGAGAGGGCACCGTGCGGTGTTCAG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTCCACAGCTAAGAACTaGCCAGGAACGATGCGACGG +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSTAKN*PGTMRR
Trigger: CCGTCGCATCGTTCCTGGCCAGTTCTTAGCTGTGGA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATGTCTCGTAAGACAGTaGGGTGAGATGGAAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRCLVRQ*GEMEAR
Trigger: TCTCGCTTCCATCTCACCCCACTGTCTTACGAGACA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGATGCAGGGATGGCTTTaGGGAATGGGGGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRMQGWL*GMGDSG
Trigger: ACCTGAGTCCCCCATTCCCCAAAGCCATCCCTGCAT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAAGCAATGGAACAGGATaGAAGCAAACCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRSNGTG*KQTQGQ
Trigger: CTGCCCTTGGGTTTGCTTCCATCCTGTTCCATTGCT...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTAAGGGGGCTTGCCTCTaGGCACCGCCAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALIKGACL*APPEML
Trigger: CAGCATCTCTGGCGGTGCCCAGAGGCAAGCCCCCTT...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTCCCAAGGTTGTGGCTaGGGAAATCAGATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSQGCG*GNQMQA
Trigger: AGCCTGCATCTGATTTCCTCAGCCACAACCTTGGGA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACTCAAACTCATAGGCTaGAGTGATCCTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLKLIG*SDPPVS
Trigger: TGAGACAGGAGGATCACTTCAGCCTATGAGTTTGAG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTCACCCAGCTCATCCTaGTTCTCAGTCCCACCCATT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSPSSS*FSVPPI
Trigger: AATGGGTGGGACTGAGAAGCAGGATGAGCTGGGTGA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTCAGGAGATAGAGGTTaGAGTGGGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSGDRG*SGLRSH
Trigger: GTGCGATCTCAGCCCACTGCAACCTCTATCTCCTGA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAGCGCTTTATTCCGAGTaGCAATGCATGCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRALYSE*QCMPQV
Trigger: TACTTGTGGCATGCATTGGCACTCGGAATAAAGCGC...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTCGAAATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCACTTGTCGCTGGTTAGGACAAGGTCGGGGTaGTCCCCAGGAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LEIDQLSSCQGNHHLSLVRTRSG*SPGTQS
Trigger: ACTCTGGGTTCCTGGGGACCACCCCGACCTTGTCCT...AACCAGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGAACTCAGGTTCTACACTaGAACCTGGGGTCATGTATC +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRTQVLH*NLGSCI
Trigger: GATACATGACCCCAGGTTCCAGTGTAGAACCTGAGT...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGGATGGCTTTGGGGAATaGGGGACTCAGGTTCTACAC +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRDGFGE*GTQVLH
Trigger: GTGTAGAACCTGAGTCCCCCATTCCCCAAAGCCATC...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGGGCTGGAACATTTCTaGAACTGGGCCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGGLEHF*NWASST
Trigger: GGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCAGTGGGAAGGCTACTTaGTTGAAGACAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGSGKAT*LKTAPS
Trigger: GCTCGGTGCTGTCTTCAATCAAGTAGCCTTCCCACT...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGCATTGGCCAGACTCATaGACACCACATCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRHWPDS*TPHLLT
Trigger: TGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAATG...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTGGAGATGGCCACAATaGCCTCGGGACACTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALIWRWPQ*PRDTVP
Trigger: CGGAACAGTGTCCCGAGGGCATTGTGGCCATCTCCA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAGGCCCACTGCCCATTaGCAGCCTTGGGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWRPTAH*QPWELQ
Trigger: TTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCATCCAGTCACCCTCCTaGCACATGGCAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVIQSPS*HMAEAR
Trigger: CCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGAT...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGACTGATCCCATCTGAATaGCTTTCTGGCTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLIPSE*LSGFPL
Trigger: TAGAGGAAAGCCAGAAAGGCATTCAGATGGGATCAG...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGGGGCACCGCCAGAGATaGTGCATACGGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWGHRQR*CIRGWG
Trigger: ACCCCACCCCCGTATGCAGCATCTCTGGCGGTGCCC...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTGCTGCTTCCCCTGTTaGATCATTGTCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRCCFPC*IIVCFL
Trigger: GAGGAAGCAGACAATGATCCAACAGGGGAAGCAGCA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCCGCCTCCTGGGAATTaGACAGCGGATATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVPPPGN*TADIWL
Trigger: CAGCCAGATATCCGCTGTCCAATTCCCAGGAGGCGG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAGGACAAGGTCGGGGTaGTCCCCAGGAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWRTRSG*SPGTQS
Trigger: ACTCTGGGTTCCTGGGGACCACCCCGACCTTGTCCT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCATCAACACCCTCCCCTaGAATGGGGCAATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGINTLP*NGAIAA
Trigger: TGCTGCTATTGCCCCATTCCAGGGGAGGGTGTTGAT...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCAGAAAGGCAGCAGCGTaGGAACAGCACACATTCTGG +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGRKAAA*EQHTFW
Trigger: CCAGAATGTGTGCTGTTCCCACGCTGCTGCCTTTCT...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGCTCTGGAGGCTGAGGTaGATTGCTCGAGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWLWRLR*IARAQE
Trigger: CTCCTGGGCTCGAGCAATCCACCTCAGCCTCCAGAG...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATTGGCATTTGGCAGGTaGAATCTCGTTTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLAFGR*NLVSDC
Trigger: GCAATCAGAAACGAGATTCCACCTGCCAAATGCCAA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCCCTAAAGGCCATGAGTaGCCGGATAACACCGAATAC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGPKGHE*PDNTEY
Trigger: GTATTCGGTGTTATCCGGTCACTCATGGCCTTTAGG...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGGGTCTTCCACTCATTaGCTCTCTTGTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGGSSTH*LSCLLV
Trigger: TACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATTTTTGGACCAGGTTTaGTTTCAGCAGCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRFLDQV*FQQQRC
Trigger: ACATCTCTGCTGCTGAAATCAAACCTGGTCCAAAAA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGGACGGCATCCACTCTTaGCAAAGGTTTCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRDGIHS*QRFLGE
Trigger: TTCACCAAGAAACCTTTGGCAAGAGTGGATGCCGTC...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATCCACAGGAGTCTTGTaGAAAAACTCCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRSTGVL*KNSSFS
Trigger: GGAAAAACTGGAGTTTTTGCACAAGACTCCTGTGGA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGCAATCACAGCTCACTaGAGCCTCAAACTCATAGGC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGAITAH*SLKLIG
Trigger: GCCTATGAGTTTGAGGCTGCAGTGAGCTGTGATTGC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATATTCCGAGTGCCAATaGATGCCACAAGTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRYSECQ*MPQVVV
Trigger: AACAACTACTTGTGGCATGCATTGGCACTCGGAATA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GAGCAGGACAAGGTCGGGGTGGTCCCCAGGAACCCAGAGTCAGTCACTTCTTCTATCACCACTTGTCGCTaGTTCACTGCACACTTCACA +
Preference number: 4 (lower is better)
Translates to: EQDKVGVVPRNPESVTSSITTCR*FTAHFT
Trigger: TGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGAT...AGAAGAAGTGACTGACTCTGGGTTCCTGGGGACCACCCCGACCTTGTCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTCCGTAGGGTGTTGGTaGAGATGGCCACAATGCCCT +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALISVGCW*RWPQCP
Trigger: AGGGCATTGTGGCCATCTCCACCAACACCCTACGGA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGAGTCTTCACCAGTGTTaGAAAACCTGCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSLHQC*KTCTQP
Trigger: TGGCTGTGTGCAGGTTTTCCAACACTGGTGAAGACT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTGGTGGCAGGCCCTCTaGCAGACTCACCTCACCACC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWWWQAL*QTHLTT
Trigger: GGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATCACGAAAGACACAATaGTGTAGGCATCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRSRKTQ*CRHQTH
Trigger: ATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCGTAAGACAGTGGGGTaGGATGGAAGCGAGATTGGT +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALIRKTVG*DGSEIG
Trigger: ACCAATCTCGCTTCCATCTCACCCCACTGTCTTACG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTGTAGCGAACCCAGATaGAACTTTCTTGGACATCAG +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRCSEPR*NFLGHQ
Trigger: CTGATGTCCAAGAAAGTTTCATCTGGGTTCGCTACA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTCTGGGAGGCCCCATTaGGCAAGCCACGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKSGRPH*ASHGPT
Trigger: TGTGGGACCGTGGCTTGCTCAATGGGGCCTCCCAGA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCCCTCTGGAACCCACCTaGGATGGGTGCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVPLEPT*DGCCRQ
Trigger: CTGTCTGCAGCACCCATCTCAGGTGGGTTCCAGAGG...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGCTCAATTTAGATGGCTaGGCACATGCAGACGAAAGA +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRLNLDG*AHADER
Trigger: TCTTTCGTCTGCATGTGCTCAGCCATCTAAATTGAG...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCCTCAAGTATCTACGCTaGGTTCCTCAGATGACTGCA +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGLKYLR*VPQMTA
Trigger: TGCAGTCATCTGAGGAACTCAGCGTAGATACTTGAG...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTAGAGAACAAGCAAGCTaGTGGGCAGACTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALIREQAS*WADFQR
Trigger: CCTCTGGAAGTCTGCCCATCAGCTTGCTTGTTCTCT...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCAGAGTGGGTGGAGGTaGTGGGGGCACAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRQSGWR*WGHSHR
Trigger: CCTGTGGCTGTGCCCCCATCACCTCCACCCACTCTG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTTGCTGCTGCCATCTCTaGGGCCAGCTCCCGCTCATC +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPCCCHL*GQLPLI
Trigger: GATGAGCGGGAGCTGGCCGCAGAGATGGCAGCAGCA...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTCCAAAGGAAACATCTaGAGAACCTCTGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSKGNI*RTSASK
Trigger: CTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTAAACTGAAGGGGGCTTaGCTCTGGGCACCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPKLKGA*LWAPPE
Trigger: CTCTGGCGGTGCCCAGAGGCAAGCCCCCTTCAGTTT...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGGCCACATACAACTGTaGAGTATCTTCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGGHIQL*SIFIGQ
Trigger: CTGGCCAATGAAGATACTCCACAGTTGTATGTGGCC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCCACCCTCCCCTGGAATaGGGCAATAGCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVHPPLE*GNSSRD
Trigger: GTCCCTGCTGCTATTGCCCCATTCCAGGGGAGGGTG...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGATCATTGGTGTTAGGTaGGAGCCTCACCACACATAT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRIIGVR*EPHHTY
Trigger: ATATGTGTGGTGAGGCTCCCACCTAACACCAATGAT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCCAGTGGGAAGAGGGGTaGGTATACACATGGTTATTG +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGQWEEG*VYTWLL
Trigger: CAATAACCATGTGTATACCCACCCCTCTTCCCACTG...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGGGCTTAAACAGCTCCTaGCCAAGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWGLNSS*PSAVAH
Trigger: GTGAGCCACTGCACTTGGCCAGGAGCTGTTTAAGCC...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGCCGTCCCCAAGGCAGTaGCCACACAGGTCACACACA +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWPSPRQ*PHRSHT
Trigger: TGTGTGTGACCTGTGTGGCCACTGCCTTGGGGACGG...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCGGAAGGCTACTTGATTaGAGACAGCACCGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVGRLLD*RQHRAS
Trigger: AGAAGCTCGGTGCTGTCTTCAATCAAGTAGCCTTCC...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCAGGGAGGTTTTCATTaGGGAATGCTGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVQGGFH*GMLLPS
Trigger: AGATGGCAGCAGCATTCCTCAATGAAAACCTCCCTG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAAGTAGGAGCGAAAGCTaGGGTGGTCCCGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKSRSES*GGPAHR
Trigger: TCTGTGGGCGGGACCACCTCAGCTTTCGCTCCTACT...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGGCAGATCCCTCTGTCTaGGTTCTGCAGCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWADPSV*VLQQPL
Trigger: CAGAGGCTGCTGCAGAACTCAGACAGAGGGATCTGC...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTTTCTGATTGCTTTATaGGGGCAGCATTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRFLIAL*GQHCLS
Trigger: AGAAAGGCAATGCTGCCCTCATAAAGCAATCAGAAA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGACTGCCTCCTGGCCTTaGATTCGGACTCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWTASWP*IRTRKS
Trigger: GCTCTTCCGAGTCCGAATGCAAGGCCAGGAGGCAGT...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGGTTCATGATCACCTCTaGCTTCTGGGAGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWVHDHL*LLGGPI
Trigger: AATGGGGCCTCCCAGAAGGCAGAGGTGATCATGAAC...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTGGGGAGCCACAGAGTaGCGCAAGTCCAAGTCGGTA +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWWGATE*RKSKSV
Trigger: TACCGACTTGGACTTGCGGCACTCTGTGGCTCCCCA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTGAGCACTCAGTCATGTaGGTTTGTGCTACCATGACC +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALIEHSVM*VCATMT
Trigger: GGTCATGGTAGCACAAACGCACATGACTGAGTGCTC...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCCTGCTGGAAAACTCTaGCAAGGCGTTGATTCATCC +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVPAGKL*QGVDSS
Trigger: GGATGAATCAACGCCTTGGCAGAGTTTTCCAGCAGG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCGCCAGTGTTGGGGTCTaGGCGAAGCAGCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVASVGV*AKQLQD
Trigger: ATCTTGGAGCTGCTTCGCCCAGACCCCAACACTGGC...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCCTTCTTCCAGAGGCATaGCTGATGAAAACTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGLLPEA*LMKTQV
Trigger: AACCTGAGTTTTCATCAGCCATGCCTCTGGAAGAAG...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAGCTCTCCTCCTGTCAGGGCAATCACCACTTGTCGCTGGTTCACTGCACACTTGGCCACATACAACTGTaGAGTATCTTCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLSSCQGNHHLSLVHCTLGHIQL*SIFIGQ
Trigger: CTGGCCAATGAAGATACTCCACAGTTGTATGTGGCC...AAGTGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp CATCATCTCCTAATAAGGAGCAGGACAAGGTCGGGGTGGTCCCCAGGAACCCAGTGGACAACACTAGGGTaGCATTCACGAAAGACACAA +
Preference number: 4 (lower is better)
Translates to: HHLLIRSRTRSGWSPGTQWTTLG*HSRKTQ
Trigger: TTGTGTCTTTCGTGAATGCCACCCTAGTGTTGTCCA...CTGGGTTCCTGGGGACCACCCCGACCTTGTCCTGCTCCTTATTAGGAGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTTAGTATCAGGTCCTTaGCCACACCCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALILVSGP*PHPPAH
Trigger: ATGTGCTGGTGGGTGTGGCCAAGGACCTGATACTAA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAAAACACACAGTCTCTaGCAAGCCCCACCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWKTHSL*QAPPGK
Trigger: CTTTCCCGGTGGGGCTTGCCAGAGACTGTGTGTTTT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTGACTTTGCTGCCTCTTaGCATTTGGCAGGTGGAATC +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALIDFAAS*HLAGGI
Trigger: GATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTC...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTTAAGTGGTCTTGGCTaGAAAAAGAATGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRLSGLG*KKNVSP
Trigger: AGGAGACACATTCTTTTTTCAGCCAAGACCACTTAA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GACTCTCTTGTCTGCTCGTATGTGCCGAATGCCATCTGGATAGACCTGCACCAAGGGTCTTCCACTCATTaGCTCTCTTGTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: DSLVCSYVPNAIWIDLHQGSSTH*LSCLLV
Trigger: TACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCC...TTGGTGCAGGTCTATCCAGATGGCATTCGGCACATACGAGCAGACAAGAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGCAGACAAATCCCCAGTaGCAGGGTCCAAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWQTNPQ*QGPRQS
Trigger: GGACTGTCTTGGACCCTGTCACTGGGGATTTGTCTG...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGGAGTTCAAGCCTCAGTaGGCTATGATCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWEFKPQ*AMITPL
Trigger: CAGTGGAGTGATCATAGCTCACTGAGGCTTGAACTC...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGAGGCGGAGGCTGTGGTaGGCCGAGATTGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLRRRLW*AEIVPL
Trigger: CAGAGGCACAATCTCGGCTCACCACAGCCTCCGCCT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGCATAACACTGGACTGTaGAGCAGACACATGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWHNTGL*SRHMPR
Trigger: TCTGGGCATGTGTCTGCTTCACAGTCCAGTGTTATG...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGGCGTTTGTGCTACCATaGCCCCAGGAGACCGGTTTT +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWAFVLP*PQETGF
Trigger: AAAACCGGTCTCCTGGGGTCATGGTAGCACAAACGC...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TTCTTTCCAGGGGTCTTCCACTCATTGACTCTCTTGTCTGCTCGTATGTGCCGACAAACTCATCTGTGGTaGTCAGCACCTTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: FFPGVFHSLTLLSARMCRQTHLW*SAPSPA
Trigger: GGCTGGTGAAGGTGCTGATCACCACAGATGAGTTTG...TCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR GCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCAATGGTAAGTCGGGCTaGAGCATCTCTGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGNGKSG*SISVQN
Trigger: ATTTTGAACAGAGATGCTGCAGCCCGACTTACCATT...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAAGGAAGCGAGACCGCTaGTCTCCAGGGGGTACATTG +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKRKRDR*SPGGTL
Trigger: CAATGTACCCCCTGGAGAGCAGCGGTCTCGCTTCCT...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTAGCCACACTAAAAGCTaGCTCATTCTGTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALISHTKS*LILFQL
Trigger: CAGCTGGAACAGAATGAGGCAGCTTTTAGTGTGGCT...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGATCAGCGTGGTCTTCTaGAAGGACAGCACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELISVVF*KDSTVS
Trigger: GGAGACGGTGCTGTCCTTGCAGAAGACCACGCTGAT...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTCTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPLSRQR*GYQVAQ
Trigger: CTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAG...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCATCACCACTTGTCGCTaGTTCACTGCACACTTCACA +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVITTCR*FTAHFT
Trigger: TGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGAT...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGATGAGCGGCTTGACATaGCCAATACTGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWMSGLT*PILPPG
Trigger: GCCAGGAGGCAGTATTGGCCATGTCAAGCCGCTCAT...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGGGGTGTTGGTGGAGATaGCCACAATGCCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRGCWWR*PQCPRD
Trigger: GTCCCGAGGGCATTGTGGCCATCTCCACCAACACCC...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCTTCCTCCAGACAAGGTaGTATAGACAAGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGFLQTR*YRQVIL
Trigger: CAGAATCACTTGTCTATACCACCTTGTCTGGAGGAA...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGATGCAAATGAGCAAGTaGATGACTCAAACACATGTC +
Preference number: 4 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRMQMSK*MTQTHV
Trigger: GACATGTGTTTGAGTCATCCACTTGCTCATTTGCAT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTGGTGCAGAACAGAGCTaGGAGGTGGTGGTTCATGGT +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPGAEQS*EVVVHG
Trigger: ACCATGAACCACCACCTCCCAGCTCTGTTCTGCACC...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGACAGTGCTCTCTTCATaGACTTTGCTGCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWTVLSS*TLLPLG
Trigger: GCCAAGAGGCAGCAAAGTCCATGAAGAGAGCACTGT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGTGGGGCCTCTTGGCTTaGAATGATGCCCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWWGLLA*NDAPFF
Trigger: AAAGAAAGGGGCATCATTCCAAGCCAAGAGGCCCCA...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp ACAGGAGAGTCAAGACATATCAATGCAGGGATGGCTTaGGGGAATGGGGGACTCAGGTTCTACACTGGAACC +
Preference number: 4 (lower is better)
Translates to: TGESRHINAGMA*GNGGLRFYTGT
Trigger: GGTTCCAGTGTAGAACCTGAGTCCCCCATTCCCCAAAGCCATCCCTGCATTGATATGTCTTGACTCTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp GTAGTTCCAGCTATTTGGGAAGCTAAGGAGGATCGCTaGAGCTCAGGAGATAGAGGTTGCAGTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VVPAIWEAKEDR*SSGDRGCSGLR
Trigger: TCTCAGCCCACTGCAACCTCTATCTCCTGAGCTCAAGCGATCCTCCTTAGCTTCCCAAATAGCTGGAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp ACTTGGGACCTTCTGATTTTTCCTGAAGTCCCAAGGTaGTGGCTGAGGAAATCAGATGCAGGCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TWDLLIFPEVPR*WLRKSDAGCRL
Trigger: GAGCCTGCAGCCTGCATCTGATTTCCTCAGCCACAACCTTGGGACTTCAGGAAAAATCAGAAGGTCCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTCATGAATGGCAAAGCTaGTGCCAGTGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPHEWQS*CQWLSA
Trigger: TGCAGAGAGCCACTGGCATCAGCTTTGCCATTCATG...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGATCTGCTGCTTTCTCTaGGCTTTCGTGGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWICCFL*AFVASV
Trigger: CACTGAGGCCACGAAAGCTCAGAGAAAGCAGCAGAT...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGTTCCAGGAGAAGAGCTaGGGGGAAAGAGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELFQEKS*GERAVD
Trigger: GTCAACAGCTCTTTCCCCTCAGCTCTTCTCCTGGAA...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGCCAGCACTCTCCCTGTaGGACGAGCCTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLPALSL*DEPFPA
Trigger: CGCTGGAAAAGGCTCGTCTCACAGGGAGAGTGCTGG...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCCCAGGAATCTGTTCTaGCAAATGAAGAGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVPRNLF*QMKRVL
Trigger: TAGAACCCTCTTCATTTGTCAGAACAGATTCCTGGG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGTAGGGTATGTACTTTaGCAGTGTTGGGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELVGYVL*QCWGLG
Trigger: GCCCAGACCCCAACACTGGCAAAGTACATACCCTAC...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTACCCCAGGTACCGAGTaGGAGTATCAGACAAATCCC +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPTPGTE*EYQTNP
Trigger: GGGATTTGTCTGATACTCGCACTCGGTACCTGGGGT...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCCGCTCATCCTCCCCTaGTGCTTCCACCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRPLILP*CFHHFL
Trigger: GAGGAAATGGTGGAAGCAGCAGGGGAGGATGAGCGG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTGGGCTCAAGCAATCTaGCTGCCTCTGGCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLWAQAI*LPLAAQ
Trigger: TTGGGCGGCCAGAGGCAGGCAGATTGCTTGAGCCCA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTGTCACACACACTCTCTaGAAGGCCCTGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPVTHTL*KALLEN
Trigger: GTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGCAGACCTCCAGGCCTTaGTTACACCAACAGTACGGA +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWQTSRP*LHQQYG
Trigger: TCCGTACTGTTGGTGTAACCAAGGCCTGGAGGTCTG...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGTCATTCCGCCTCCTaGGAATTGGACAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELGHSAS*ELDSGY
Trigger: ATATCCGCTGTCCAATTCCCAGGAGGCGGAATGACC...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGGCCAGATCAGCTATCTaGCAAAACAGAATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWARSAI*QNRMGE
Trigger: CTCTCCCATTCTGTTTTGCCAGATAGCTGATCTGGC...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAGAGTCAGTCACTTCTTCTACAGTTTCTCCAATGGACAACACTAGGGTGGCATCTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSQSLLLQFLQWTTLGWHLSRQR*GYQVAQ
Trigger: CTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAG...ATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAGAAGAAGTGACTGACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCTACAGTTTCTCCAATaGACAACACTAGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVLQFLQ*TTLGWH
Trigger: ATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTGCATTTCCACATGCTaGAAGAAGTCATGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALICISTC*KKSWSS
Trigger: TGAGGACCATGACTTCTTCCAGCATGTGGAAATGCA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGCTTCCTGCTCTAACTTaGGTTCAAACCTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWLPALT*VQTSHL
Trigger: TAGGTGGGAGGTTTGAACCCAAGTTAGAGCAGGAAG...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTTTCTCAGGGGTGGGCTaGAACATTTCTGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPFSGVG*NISGTG
Trigger: CCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAA...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGTGTGCTGGTTCAGACTaGTGTGTAGCCTACACCTGC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELCAGSD*CVAYTC
Trigger: GCAGGTGTAGGCTACACACCAGTCTGAACCAGCACA...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCTCTCTGGGGCCTCTTaGCTTGGAATGATGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKLSGAS*LGMMPL
Trigger: AAGGGGCATCATTCCAAGCCAAGAGGCCCCAGAGAG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCTCCACTTGGACCATCTaGCCCTCCTGGAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVSTWTI*PSWNCN
Trigger: ATTACAGTTCCAGGAGGGTCAGATGGTCCAAGTGGA...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAGAAACAGCCATTTCTaGCACCTCAAGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWRNSHF*HLKSMS
Trigger: AGACATGGACTTGAGGTGTCAGAAATGGCTGTTTCT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTGCACACCACATCTGCTaGCATCTCCTTCCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPAHHIC*HLLPFC
Trigger: ACAGAACGGAAGGAGATGTCAGCAGATGTGGTGTGC...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTGGGTTCCATGGAATTaGACTGCTCACAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWWVPWN*TAHRGL
Trigger: GAGACCTCTGTGAGCAGTTCAATTCCATGGAACCCA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTTTCTGCAGCAGCCTCTaGTGGGTTTTGCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPFCSSL*WVLPKL
Trigger: CAGCTTTGGCAAAACCCATCAGAGGCTGCTGCAGAA...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCAAAAACAAGAATTTATaGCCAGGCGCAATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVKNKNL*PGAMAH
Trigger: GTGAGCCATTGCGCCTGGTCATAAATTCTTGTTTTT...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCTGTTGGATCATTGTCTaGTTCCTCATAATCCATTTC +
Preference number: 4 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGCWIIV*FLIIHF
Trigger: GAAATGGATTATGAGGAAGCAGACAATGATCCAACA...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCTGCTGGGTATTAGCTaGTGCTTCCCCTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKLLGIS*CFPCWI
Trigger: GATCCAACAGGGGAAGCAGCAGCTAATACCCAGCAG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTCTCGTATGTGCCGAATaGCATCTGGATAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPLVCAE*HLDRPA
Trigger: TGCAGGTCTATCCAGATGGCATTCGGCACATACGAG...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTGGGCTGGGAGAGCCTaGATGCTTAGAGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKWAGRA*MLRGCK
Trigger: TTTGCAACCTCTAAGCATGCAGGCTCTCCCAGCCCA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGATTGAGGAATGCTGCTaGCATCTCTGCGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRIEECC*HLCGQL
Trigger: GAGCTGGCCGCAGAGATGGCAGCAGCATTCCTCAAT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGGTTTTCATTGAGGAATaGTGCTGCCATCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWVFIEE*CCHLCG
Trigger: GCCGCAGAGATGGCAGCAGCATTCCTCAATGAAAAC...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCTCTATTTACCTGGTTaGTCAATCAAACCACAGGAG +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALILYLPG*SIKPQE
Trigger: CTCCTGTGGTTTGATTGAGCAACCAGGTAAATAGAG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCAGTCATGTGCGTTTGTaGTACCATGACCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVSHVRL*YHDPRR
Trigger: TCTCCTGGGGTCATGGTAGCACAAACGCACATGACT...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGGCGAGAAGGATGGTGTaGATATCCAACGGATGCTAC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWARRMV*ISNGCY
Trigger: GTAGCATCCGTTGGATATCCACACCATCCTTCTCGC...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCCTGCAGCGAGAAGGATaGTGTGGATATCCAACGGAT +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVLQREG*CGYPTD
Trigger: ATCCGTTGGATATCCACACCATCCTTCTCGCTGCAG...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TTTCTTTCCAGGGGTCTTCCACTCATTGACTCTCTTGTCTGCTCGTATGTGCCGGTGGAGTATCTTCATTaGCCAGATCAGCTATCTGGC +
Preference number: 4 (lower is better)
Translates to: FLSRGLPLIDSLVCSYVPVEYLH*PDQLSG
Trigger: GCCAGATAGCTGATCTGGCCAATGAAGATACTCCAC...CGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCAAATCCGTAGGGTGTTaGTGGAGATGGCCACAATGC +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVKSVGC*WRWPQC
Trigger: GCATTGTGGCCATCTCCACCAACACCCTACGGATTT...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGATCACCTCTGCCTTCTaGGAGGCCCCATTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRITSAF*EAPLSK
Trigger: CTTGCTCAATGGGGCCTCCCAGAAGGCAGAGGTGAT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCGGGTGGGTATACACATaGTTATTGAGGTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVGWVYT*LLRSCF
Trigger: GAAACATGACCTCAATAACCATGTGTATACCCACCC...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAACACAGCCCTCTAGCCTaGTCAAGAGAGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKHSPLA*SRERDS
Trigger: GGAATCTCTCTCTCTTGACCAGGCTAGAGGGCTGTG...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGCACCGTGTGAATAATTaGGAGCAGACCCCAGGAATC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWHRVNN*EQTPGI
Trigger: GATTCCTGGGGTCTGCTCCCAATTATTCACACGGTG...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGCAGCCCCCTAATTACTaGGACTACAAGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELQPPNY*DYKCAP
Trigger: TGGTGCACACTTGTAGTCCCAGTAATTAGGGGGCTG...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGTTGGATCGACAAAACTaGATTCCTGGTTTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWLDRQN*IPGFAL
Trigger: CAGGGCAAAACCAGGAATCCAGTTTTGTCGATCCAA...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp AACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTaGTCCTCGAGAGCCATCTATTCCTTTCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: NHGQAGVLRVPI*SSRAIYSFPPL
Trigger: CAACGGAGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGCTTGGCCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp ATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCACTaGTCGCTGGTTCACTGCACACTTCACAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: IDQLSSCQGNHH*SLVHCTLHNCF
Trigger: AAAACAATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR TCA 90 bp TTTCTTTCCAGGGGTCTTCCACTCATTGACTCTCTTGTCTGCTCGTATGTGCCGAGAAACAGCCATTTCTaGCACCTCAAGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FLSRGLPLIDSLVCSYVPRNSHF*HLKSMS
Trigger: AGACATGGACTTGAGGTGTCAGAAATGGCTGTTTCT...CGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR TCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAAGGTTGCAAACAGTCTaGGGGATCCAGGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKRLQTV*GIQGDD
Trigger: ATCATCTCCCTGGATCCCTCAGACTGTTTGCAACCT...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTACTCTCAGGGTGGATaGCAAATTTCCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWYSQGG*QISWVC
Trigger: ACACACCCAGGAAATTTGTCATCCACCCTGAGAGTA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAATCCAGTGTGTTCCCTTaGATGGGATTCATCACTCGG +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKSSVFP*MGFITR
Trigger: CCGAGTGATGAATCCCATTCAAGGGAACACACTGGA...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGGGTGGTGACAACTCCTaGTTCCATAGATTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWGGDNS*FHRLGF
Trigger: AAAACCTAATCTATGGAATCAGGAGTTGTCACCACC...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGCCTTCTGATTTTTCCTaGAGTCCCAAGGTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWPSDFS*SPKVVA
Trigger: AGCCACAACCTTGGGACTTCAGGAAAAATCAGAAGG...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTCCTCTCCTTTCATTATaGGACTGCAGTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPPLLSL*DCSQRR
Trigger: CCTTCTCTGACTGCAGTCTCATAATGAAAGGAGAGG...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGACTCTGCCAAGGCGTTaGTTCATCCGTTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLTLPRR*FIRWAA
Trigger: AGCTGCCCAACGGATGAATCAACGCCTTGGCAGAGT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TCAGTCACTTCTTCTACAGTTTCTCCAATGGACAACACTAGGGTGGCATTCACGCTCGTATGTGCCGAATaGCATCTGGATAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SVTSSTVSPMDNTRVAFTLVCAE*HLDRPA
Trigger: TGCAGGTCTATCCAGATGGCATTCGGCACATACGAG...CGTGAATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAGAAGAAGTGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR GCA 90 bp GTTTTCTTTCCAGGGGTCTTCCACTCATTGACTCTCTTGTCTGCTCGTATGTGCATTGACTCTCTTGTCTaGTCGTATGTGCCGAATGCC +
Preference number: 4 (lower is better)
Translates to: VFFPGVFHSLTLLSARMCIDSLV*SYVPNA
Trigger: GGCATTCGGCACATACGAGCAGACAAGAGAGTCAAT...GCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR GCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAACTGGGAGAGCCTGCATaGTTAGAGGTTGCAAACAGT +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKLGEPA*LEVANS
Trigger: ACTGTTTGCAACCTCTAAGCATGCAGGCTCTCCCAG...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGCGAGGCAAAACCCGATaGAAATTCCAGTGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWRGKTR*KFQCLV
Trigger: TACGAGACACTGGAATTTGCATCGGGTTTTGCCTCG...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTGTTGCCAAACTTGTCTaGCCCAGCCACAGTGTCATA +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPVAKLV*PSHSVI
Trigger: TATGACACTGTGGCTGGGGCAGACAAGTTTGGCAAC...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGTCACCACACATATGTTaGCAAACTTGTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELSPHIC*QTCLPQ
Trigger: CTGGGGCAGACAAGTTTGGCAACATATGTGTGGTGA...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGAGGTGCATTTCCACATaGTGGAAGAAGTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELRCIST*WKKSWS
Trigger: GGACCATGACTTCTTCCAGCATGTGGAAATGCACCT...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTTGTTCAGACCGCAGGTaGATTTCCACATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPCSDRR*ISTCWK
Trigger: CTTCCAGCATGTGGAAATGCACCTGCGGTCTGAACA...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTGTGGTTCATGGTAGGTaGCCAGTAAACGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPVVHGR*PVNVCG
Trigger: TCCACAAACGTTTACTGGGCACCTACCATGAACCAC...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTCTTCATGGACTTTGCTaGCTCTTGGCATTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPLHGLC*LLAFGR
Trigger: CCTGCCAAATGCCAAGAGGCAGCAAAGTCCATGAAG...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGAGGAAACCAAGACTATaGTTAGAGGCTAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELRKPRL*LEASEP
Trigger: GGGCTCACTAGCCTCTAAGCATAGTCTTGGTTTCCT...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTCTCTGCAAGGCCCTaGTGGAAAACTCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYLSARP*WKTLPR
Trigger: CCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGGCCCATTGCCAGCCTTaGGAGCTCCAAAGATGGATT +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRAHCQP*ELQRWI
Trigger: AATCCATCTTTGGAGCTCCCAAGGCTGGCAATGGGC...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCTCATTCTGTTCCAGCTaGACAAGGTCCAGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVSFCSS*TRSSVF
Trigger: GAACACACTGGACCTTGTCCAGCTGGAACAGAATGA...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGCTTGGACACTTCGGGTaGGGTTCGGTCCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLLGHFG*GSVQFF
Trigger: GAAGAACTGGACCGAACCCCACCCGAAGTGTCCAAG...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTATCCTCGAGTTTCTTaGACACTTCGGGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKYPRVS*TLRVGF
Trigger: GAACCCCACCCGAAGTGTCCAAGAAACTCGAGGATA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGGAACAGCACACATTCTaGGGACCAGCACTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLEQHTF*GPALSL
Trigger: CAGGGAGAGTGCTGGTCCCCAGAATGTGTGCTGTTC...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATAACAGAGCTGGGAGGTaGTGGTTCATGGTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYNRAGR*WFMVGA
Trigger: GGCACCTACCATGAACCACCACCTCCCAGCTCTGTT...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCGAAGTCCCAAGGTTGTaGCTGAGGAAATCAGATGCA +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVEVPRL*LRKSDA
Trigger: TGCATCTGATTTCCTCAGCCACAACCTTGGGACTTC...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCTCAGCTATTCCAGATaGGCTGGCCCAGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRLSYSR*AGPAPF
Trigger: AAAAGGAGCTGGGCCAGCCCATCTGGAATAGCTGAG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTCTCCCTGCTCAGTTTaGGCCAAAAAGAAGAACATC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWSPCSV*AKKKNI
Trigger: GATGTTCTTCTTTTTGGCTCAAACTGAGCAGGGAGA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ATCCATCTCGAAATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCACTTGTCGTCACGAAAGACACAATaGTGTAGGCATCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: IHLEIDQLSSCQGNHHLSSRKTQ*CRHQTH
Trigger: ATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGA...CGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR TCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCGACATGGTAGTTCATaGTCACCTCTGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYRHGSS*SPLPSG
Trigger: CCCAGAAGGCAGAGGTGATCATGAACTACCATGTCG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGAGTGGAACTCAGGAGTaGTACTATACCCTACCCAGT +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKSGTQE*YYTLPS
Trigger: ACTGGGTAGGGTATAGTATCACTCCTGAGTTCCACT...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCTCTGTTCTGGGCTCTaGGAGGTTCAGATTGTATTC +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKLCSGL*EVQIVF
Trigger: GAATACAATCTGAACCTCTCAGAGCCCAGAACAGAG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCTGCAGCAACAACTATaGAAATTCCTTTCCACATAT +
Preference number: 4 (lower is better)
Translates to: VTHTLCKALLENSAKALILQQQL*KFLSTY
Trigger: ATATGTGGAAAGGAATTTTCATAGTTGTTGCTGCAG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTCCATTTCAGTTCACCTaGACTTCACAGGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPPFQFT*TSQGVL
Trigger: CAACACACCCTGTGAAGTTCAGGTGAACTGAAATGG...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTGTGGAATCTCGTTTCTaGTTGCTTTATGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPVESRF*LLYEGS
Trigger: GCTGCCCTCATAAAGCAATCAGAAACGAGATTCCAC...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGGTCAAGACATATCAATaGAGGGATGGCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWVKTYQ*RDGFGE
Trigger: TTCCCCAAAGCCATCCCTGCATTGATATGTCTTGAC...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCCCTCCTCCAAAGGAATaGTATTCTTGGCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVPPPKE*YSWQEI
Trigger: GATCTCTTGCCAAGAATAGCATTCCTTTGGAGGAGG...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCACAGCGACAGAGACTaGCTGGTTATAAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKHSDRD*LVINSP
Trigger: AGGAGAGTTTATAACCAGGCAGTCTCTGTCGCTGTG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATGCTGAGGAAATCAGATaGAGGCTGCAGGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYAEEIR*RLQALL
Trigger: CAGAAGAGCCTGCAGCCTGCATCTGATTTCCTCAGC...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAATGGACAGCGGATATCTaGCTGGTCACCAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKWTADI*LVTKVL
Trigger: AAGAACTTTGGTGACCAGCCAGATATCCGCTGTCCA...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TCAGTCACTTCTTCTACAGTTTCTCCAATGGACAACACTAGGGTGGCATTCACGGCCAGATCAGCTATCTaGCAAAACAGAATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SVTSSTVSPMDNTRVAFTARSAI*QNRMGE
Trigger: CTCTCCCATTCTGTTTTGCCAGATAGCTGATCTGGC...CGTGAATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAGAAGAAGTGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGGTGGAGTATCTTCATTaGCCAGATCAGCTATCTGGC +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKVEYLH*PDQLSG
Trigger: GCCAGATAGCTGATCTGGCCAATGAAGATACTCCAC...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTGGACAACACTAGGGTaGCATTCACGAAAGACACAA +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWWTTLG*HSRKTQ
Trigger: TTGTGTCTTTCGTGAATGCCACCCTAGTGTTGTCCA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGGGGTGTGTACTGCAGTaGGAAGGCTACTTGATTGAA +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKGCVLQ*EGYLIE
Trigger: TTCAATCAAGTAGCCTTCCCACTGCAGTACACACCC...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAATGCTGGAAGAAGTCATaGTCCTCATGGGACGTGAAT +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKCWKKS*SSWDVN
Trigger: ATTCACGTCCCATGAGGACCATGACTTCTTCCAGCA...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGTTCCTCAATACCCAGTaGGAAGAGGGGTGGGTATAC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRFLNTQ*EEGWVY
Trigger: GTATACCCACCCCTCTTCCCACTGGGTATTGAGGAA...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAAGGAATGCTATTCTTaGCAAGAGATCTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWKECYS*QEIFQR
Trigger: CCTTTGGAAGATCTCTTGCCAAGAATAGCATTCCTT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTCTGGTCTTAAACTTCTaGGCTCAAGCAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPLVLNF*AQAICL
Trigger: CAGGCAGATTGCTTGAGCCCAGAAGTTTAAGACCAG...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp ACCCAGTGGGAAGAGGGGTGGGTATACACATGGTTATaGAGGTCATGTTTCATCAGCACAGCAAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: TQWEEGWVYTWL*RSCFISTAKRT
Trigger: GGTTCTTTTTGCTGTGCTGATGAAACATGACCTCAATAACCATGTGTATACCCACCCCTCTTCCCACTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCCAGAAAAGTTTCCATaGATGGCAAAGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKPEKFP*MAKLMP
Trigger: TGGCATCAGCTTTGCCATTCATGGAAACTTTTCTGG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATATCTCAGTGCCAATTTaGGGGGAAGCCAGTCATTCC +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYISVPI*GEASHS
Trigger: GGAATGACTGGCTTCCCCTCAAATTGGCACTGAGAT...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGCAGAGATGTTTCTTCTaGGCTCTACATATAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELQRCFF*ALHIAL
Trigger: AAGGGCTATATGTAGAGCTCAGAAGAAACATCTCTG...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTTCCATGGAATTGAACTaGTCACAGAGGTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPSMELN*SQRSPS
Trigger: TGATGGAGACCTCTGTGAGCAGTTCAATTCCATGGA...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAAAATTAAGGGTGTGTaGAAAAGTAGACAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWKIKGV*KSRQES
Trigger: ACTCTCCTGTCTACTTTTGCACACACCCTTAATTTT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGAAAGATCGCTTTAGGTaGTGTATCAGTAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELKDRFR*CISKRG
Trigger: GCCCCTTTTACTGATACAGCACCTAAAGCGATCTTT...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATAAAGAGGCGAGGAGCTaGTCAAGTATCTACGCTGAG +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYKEARS*SSIYAE
Trigger: CTCAGCGTAGATACTTGAGCAGCTCCTCGCCTCTTT...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTAACAACTCTTGGTTGTaGTGGTTCAGACTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPNNSWL*WFRLVC
Trigger: ACACACCAGTCTGAACCAGCACAACCAAGAGTTGTT...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTCTGACTGTATACAGTaGTCTCTTCATGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWSDCIQ*SLHGLC
Trigger: GCAAAGTCCATGAAGAGAGCACTGTATACAGTCAGA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GAGTCAGTCACTTCTTCTACAGTTTCTCCAATGGACAACACTAGGGTGGCATTCCTACAGTTTCTCCAATaGACAACACTAGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ESVTSSTVSPMDNTRVAFLQFLQ*TTLGWH
Trigger: ATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAG...GAATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAGAAGAAGTGACTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CCA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCAGATGAAACTTTCTTaGACATCAGATACAATTACC +
Preference number: 4 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVQMKLS*TSDTIT
Trigger: GGTAATTGTATCTGATGTCCAAGAAAGTTTCATCTG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTCATGGGACGTGAATaGCACAAGGATGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYLMGRE*HKDANS
Trigger: GGAATTGGCATCCTTGTGCCATTCACGTCCCATGAG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATATATCAATGCAGGGATaGCTTTGGGGAATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYISMQG*LWGMGD
Trigger: GTCCCCCATTCCCCAAAGCCATCCCTGCATTGATAT...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGGTCCAAGTCGGTATCTaGAAGGAAGGAGTCTACTCA +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRVQVGI*KEGVYS
Trigger: TGAGTAGACTCCTTCCTTCCAGATACCGACTTGGAC...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCTTCACAGGGTGTGTTaGGCTACCAGATCACTCAAA +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRLHRVC*ATRSLK
Trigger: TTTGAGTGATCTGGTAGCCCAACACACCCTGTGAAG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGAACTCTTGGTTGTGCTaGTTCAGACTGGTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRNSWLC*FRLVCS
Trigger: GCTACACACCAGTCTGAACCAGCACAACCAAGAGTT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCAAGAGAAACAACTCTTaGTTGTGCTGGTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVKRNNS*LCWFRL
Trigger: CAGTCTGAACCAGCACAACCAAGAGTTGTTTCTCTT...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCGCAAGTTCTGCTGAGTaGACCTGGGAATTTAAAACT +
Preference number: 4 (lower is better)
Translates to: LGKRSSKGNICRTSASKVASSAE*TWEFKT
Trigger: AGTTTTAAATTCCCAGGTCCACTCAGCAGAACTTGC...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTGCCTCTTGGCATTTaGCAGGTGGAATCTCGTTTC +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYLPLGI*QVESRF
Trigger: GAAACGAGATTCCACCTGCCAAATGCCAAGAGGCAG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp TTCACAATTGTTTTCTTTCCAGGGGTCTTCCACTCATaGACTCTCTTGTCTGCTCGTATGTGCCGAATGCCA +
Preference number: 4 (lower is better)
Translates to: FTIVFFPGVFHS*TLLSARMCRMP
Trigger: TGGCATTCGGCACATACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCCTGGAAAGAAAACAATTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR TCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCGAATACTTCCACAGTaGGTAGGGTATGTACTTTGC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRRILPQ*VGYVLC
Trigger: GCAAAGTACATACCCTACTCACTGTGGAAGTATTCG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGTTCCTGGTTTTGCCCTaGACTTGCAACAGGACAATA +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRFLVLP*TCNRTI
Trigger: TATTGTCCTGTTGCAAGTTCAGGGCAAAACCAGGAA...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGATTGACTCTCTTGTCTaGTCGTATGTGCCGAATGCC +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLIDSLV*SYVPNA
Trigger: GGCATTCGGCACATACGAGCAGACAAGAGAGTCAAT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTGCATGCTTAGAGGTTaGAAACAGTCTGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLCMLRG*KQSEGS
Trigger: GGATCCCTCAGACTGTTTGCAACCTCTAAGCATGCA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATTTCTCTGAGCTTTCGTaGCCTCAGTGTAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYFSELS*PQCRHC
Trigger: ACAATGCCTACACTGAGGCCACGAAAGCTCAGAGAA...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGGTGTGTTCCCTTGAATaGGATTCATCACTCGGATCA +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRVCSLE*DSSLGS
Trigger: TGATCCGAGTGATGAATCCCATTCAAGGGAACACAC...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGTTCTACACTGGAACCTaGGGTCATGTATCATGTACC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRFYTGT*GHVSCT
Trigger: GGTACATGATACATGACCCCAGGTTCCAGTGTAGAA...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGAGGAATTCTCAGGGGTaGGCTGGAACATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLRNSQG*AGTFLE
Trigger: TTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAATATTTTCGGACCACATaGTTTAAACCAAGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKYFRTT*FKPRSS
Trigger: GCTAGACCTTGGTTTAAATCATGTGGTCCGAAAATA...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGTATACACATGGTTATTaGGGTCATGTTTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELYTHGY*GHVSSA
Trigger: TGCTGATGAAACATGACCTCAATAACCATGTGTATA...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAGATGGGACTTGTCATTaGGTCACATCCAATCTAATT +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKDGTCH*VTSNLI
Trigger: AATTAGATTGGATGTGACTCAATGACAAGTCCCATC...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATATCCCACTAGGATTATaGGCCACAACTACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYIPLGL*ATTTGF
Trigger: GAAACCTGTAGTTGTGGCTCATAATCCTAGTGGGAT...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TCAGTCACTTCTTCTACAGTTTCTCCAATGGACAACACTAGGGTGGCATTCACGTTGTCGCTGGTTCACTaGACACTTCACAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: SVTSSTVSPMDNTRVAFTLSLVH*TLHNCF
Trigger: AAAACAATTGTGAAGTGTGCAGTGAACCAGCGACAA...CGTGAATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAGAAGAAGTGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR GCA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTAGATGGCTGAGCACATaGAGACGAAAGAAAGTTTTA +
Preference number: 4 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPRWLST*RRKKVL
Trigger: TAAAACTTTCTTTCGTCTGCATGTGCTCAGCCATCT...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGCTGATTCTAACCCAGTaGTCACCAGATCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLLILTQ*SPDHLL
Trigger: GAGCAAATGATCTGGTGAGCACTGGGTTAGAATCAG...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGAGTTCCTCAGATGACTaGATGTCAGTATCACACAAT +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKSSSDD*MSVSHN
Trigger: ATTGTGTGATACTGACATGCAGTCATCTGAGGAACT...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGATCGATTTGGTTTTATaGGTTGCAGAGCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELIDLVL*VAEQTK
Trigger: TTTTGTCTGCTCTGCAACCCATAAAACCAAATCGAT...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAAGAAGAACATCGATTTaGTTTTATGGGTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKRRTSI*FYGLQS
Trigger: GCTCTGCAACCCATAAAACCAAATCGATGTTCTTCT...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGATGGTTTCCAAATTCTaGTGCTACAAAAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRMVSKF*CYKKEP
Trigger: GGGTTCCTTTTTGTAGCATCAGAATTTGGAAACCAT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp GGTGGCATTCACGAAAGACACAATGATGTAGGCATCAAACTCATCTGTGGTGATTTAAGTGGTCTTGGCTaGAAAAAGAATGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGIHERHNDVGIKLICGDLSGLG*KKNVSP
Trigger: AGGAGACACATTCTTTTTTCAGCCAAGACCACTTAA...ATCACCACAGATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGAATGCCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR GCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTGGATATCCAACGGATaGTACCTCCCTTCAAAACTT +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLWISNG*YLPSKL
Trigger: AAGTTTTGAAGGGAGGTAGCATCCGTTGGATATCCA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATTTCGACCAGAGTCACTaGCAACTACAATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYFDQSH*QLQCSL
Trigger: AAGACTACATTGTAGTTGGCAGTGACTCTGGTCGAA...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGTTGTCGCTGGTTCACTaGACACTTCACAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRLSLVH*TLHNCF
Trigger: AAAACAATTGTGAAGTGTGCAGTGAACCAGCGACAA...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGCTACTCAGTTCTTCCTaGTCTAACTTGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLLLSSS*SNLGSN
Trigger: GTTTGAACCCAAGTTAGAGCAGGAAGAACTGAGTAG...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTCCCAGAGATATAATTaGCAATATGCTTATTCTCAC +
Preference number: 4 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWSQRYN*QYAYSH
Trigger: GTGAGAATAAGCATATTGCCAATTATATCTCTGGGA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGAATGTCAATCAACCATaGCCAAGCAGGTGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRNVNQP*PSRCFK
Trigger: CTTAAAACACCTGCTTGGCCATGGTTGATTGACATT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
3UTR CAA 72 bp TTAGGGATTCGATTCCTGGCAAAACCTGGGTCTCTCTaGACTGATCTAAAACCAAGTCATGATTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LGIRFLAKPGSL*TDLKPSHDSRD
Trigger: ATCTCTTGAATCATGACTTGGTTTTAGATCAGTCAAGAGAGACCCAGGTTTTGCCAGGAATCGAATCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR TCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGTATTTTAGTCAAACTTaGGTTAGAAAAGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRYFSQT*VRKEAR
Trigger: CCTCGCCTCTTTTCTAACTCAAGTTTGACTAAAATA...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR GCA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGAACTTTTGTAGGTCCTaGAGCAACAACTATGAAAAT +
Preference number: 4 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKNFCRS*SNNYEN
Trigger: ATTTTCATAGTTGTTGCTGCAGGACCTACAAAAGTT...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CCA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCAGACAAGCAAACATTaGATTTTCAAATCCGACATC +
Preference number: 4 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRQTSKH*IFKSDI
Trigger: GATGTCGGATTTGAAAATCCAATGTTTGCTTGTCTG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGGAAACTGAAGGGGGCTaGCCTCTGGGCACCGCCAGA +
Preference number: 5 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRETEGG*PLGTAR
Trigger: TCTGGCGGTGCCCAGAGGCAAGCCCCCTTCAGTTTC...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp GACGGGACCCCAGGTACCGAGTGCGAGTATCAGACAAATCCCCAGTaGCAGGGTCCAAGACAGTCCTCAGCAGCACACCGTTCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: DGTPGTECEYQTNPQ*QGPRQSSAAHRSVA
Trigger: GGCTACAGAACGGTGTGCTGCTGAGGACTGTCTTGGACCCTGTCACTGGGGATTTGTCTGATACTCGCACTCGGTACCTGGGGTCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS GCA 90 bp CTGAGGTGGTCCCGCCCACAGAGAGGGGGATGTTCAGACCGCAGGTaGATTTCCACATGCTGGAAGAAGTCATGGTCCTCATGGGACGTG +
Preference number: 5 (lower is better)
Translates to: LRWSRPQRGGCSDRR*ISTCWKKSWSSWDV
Trigger: CACGTCCCATGAGGACCATGACTTCTTCCAGCATGTGGAAATGCACCTGCGGTCTGAACATCCCCCTCTCTGTGGGCGGGACCACCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CCA 90 bp GGAGGGCTCAGAAGGCGTAGCGGGTCCGGATATCCTCGAGTTTCTTaGACACTTCGGGTGGGGTTCGGTCCAGTTCTTCAGAGACGTTCT +
Preference number: 5 (lower is better)
Translates to: GGLRRRSGSGYPRVS*TLRVGFGPVLQRRS
Trigger: AGAACGTCTCTGAAGAACTGGACCGAACCCCACCCGAAGTGTCCAAGAAACTCGAGGATATCCGGACCCGCTACGCCTTCTGAGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRTVQTA*GLPGSS
Trigger: TGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTTCTGGGAGGCCCCATaGAGCAAGCCACGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: VTHTLCKALLENSAKALIFWEAP*SKPRSH
Trigger: GTGGGACCGTGGCTTGCTCAATGGGGCCTCCCAGAA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGCTGCTGCTTCCCCTGTaGGATCATTGTCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRLLLPL*DHCLLP
Trigger: AGGAAGCAGACAATGATCCAACAGGGGAAGCAGCAG...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GCATCATCTCCTAATAAGGAGCAGGACAAGGTCGGGGTGGTCCCCAGGAACCCAACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: ASSPNKEQDKVGVVPRNPTVQTA*GLPGSS
Trigger: TGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGT...TGGGTTCCTGGGGACCACCCCGACCTTGTCCTGCTCCTTATTAGGAGATGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS TCA 90 bp CTCCATCAATCACATTCTTCACAGGGAAGTAGTAGGAGCGAAAGCTaGGGTGGTCCCGCCCACAGAGAGGGGGATGTTCAGACCGCAGGT +
Preference number: 5 (lower is better)
Translates to: LHQSHSSQGSSRSES*GGPAHREGDVQTAG
Trigger: ACCTGCGGTCTGAACATCCCCCTCTCTGTGGGCGGGACCACCTCAGCTTTCGCTCCTACTACTTCCCTGTGAAGAATGTGATTGATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS TCA 90 bp GACGGGACCCCAGGTACCGAGTGCGAGTATCAGACAAATCCCCAGTaGCAGGGTCCAAGACAGTCCTCAGCAGCACACCGTTCTAATCAA +
Preference number: 5 (lower is better)
Translates to: DGTPGTECEYQTNPQ*QGPRQSSAAHRSNQ
Trigger: TTGATTAGAACGGTGTGCTGCTGAGGACTGTCTTGGACCCTGTCACTGGGGATTTGTCTGATACTCGCACTCGGTACCTGGGGTCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568539.1
CDS TCA 90 bp CAGCACCGTCTCCCCGACATGGTAGTTCATGATCACCTCTGCCTGTaGGTCACAAACAGACTAGTGACTGTGTGCACCCTCAGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: QHRLPDMVVHDHLCL*VTNRLVTVCTLRSL
Trigger: GAGGCTCCTGAGGGTGCACACAGTCACTAGTCTGTTTGTGACTCACAGGCAGAGGTGATCATGAACTACCATGTCGGGGAGACGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565990.2
CDS GCA 90 bp GGAAGCGAGACCGCTGCTCTCCAGGGGGTACATTGGCCAGACTCATaGACACCACATCTGCTGACATCTCCTTCCGTTCTGTGTACTCAT +
Preference number: 5 (lower is better)
Translates to: GSETAALQGVHWPDS*TPHLLTSPSVLCTH
Trigger: ATGAGTACACAGAACGGAAGGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAATGTACCCCCTGGAGAGCAGCGGTCTCGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000567250.5
ENST00000568291.2
CDS GCA 90 bp CCCATTTCCACGATACACAAGGACTCAGGCTGGGCTGGGAGAGCCTaGATGCTTAGAGGTTGCAAACAGTCTGAGGGATCCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: PISTIHKDSGWAGRA*MLRGCKQSEGSREM
Trigger: CATCTCCCTGGATCCCTCAGACTGTTTGCAACCTCTAAGCATGCAGGCTCTCCCAGCCCAGCCTGAGTCCTTGTGTATCGTGGAAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567250.5
CDS GCA 90 bp GGTGTTAGGTGGGAGCCTCACCACACATATGTTGCCAAACTTGTCTaGCCCAGCCACAGTGTCATAGTCCAGGAGGCTGGCTGTAGTGAC +
Preference number: 5 (lower is better)
Translates to: GVRWEPHHTYVAKLV*PSHSVIVQEAGCSD
Trigger: GTCACTACAGCCAGCCTCCTGGACTATGACACTGTGGCTGGGGCAGACAAGTTTGGCAACATATGTGTGGTGAGGCTCCCACCTAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 90 bp AGACGAAGCCCCCTGCCACAGATCGGGGGTTTAGTATCAGGTCCTTaGCCACACCCACCAGCACATACCAGTCTTCACCAGTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: RRSPLPQIGGLVSGP*PHPPAHTSLHQCWK
Trigger: TTTCCAACACTGGTGAAGACTGGTATGTGCTGGTGGGTGTGGCCAAGGACCTGATACTAAACCCCCGATCTGTGGCAGGGGGCTTCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGATATCCTCGAGTTTCTaGGACACTTCGGGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRISSSF*DTSGGV
Trigger: AACCCCACCCGAAGTGTCCAAGAAACTCGAGGATAT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGACTTCACAGGGTGTGTaGGGCTACCAGATCACTCAA +
Preference number: 5 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRTSQGV*GYQITQ
Trigger: TTGAGTGATCTGGTAGCCCAACACACCCTGTGAAGT...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGGCCTCTTCCACCTAACAGGCGGACTTTGCTGCCTCTaGGCATTTGGCAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SQGWAGTFLELGLFHLTGGLCCL*AFGRWN
Trigger: ATTCCACCTGCCAAATGCCAAGAGGCAGCAAAGTCC...GCCTGTTAGGTGGAAGAGGCCCAGTTCCAGAAATGTTCCAGCCCACCCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp GCTGCCTCATTCTGTTCCAGCTGGACAAGGTCCAGTGTGTTCCCTTaGATGGGATTCATCACTCGGATCACAGAGGCCCACTGCCCATTG +
Preference number: 5 (lower is better)
Translates to: AASFCSSWTRSSVFP*MGFITRITEAHCPL
Trigger: CAATGGGCAGTGGGCCTCTGTGATCCGAGTGATGAATCCCATTCAAGGGAACACACTGGACCTTGTCCAGCTGGAACAGAATGAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS GCA 90 bp CGGCTCGCCCTTTGGGATCCACAGCTAAGAACTGGCCAGGAACGATaGGACGGCATCCACTCTTGCCAAAGGTTTCTTGGTGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: RLALWDPQLRTGQER*DGIHSCQRFLGESS
Trigger: AGAAGATTCACCAAGAAACCTTTGGCAAGAGTGGATGCCGTCGCATCGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGGCGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS GCA 90 bp TTCAGGTATAGGAAGCCAATCGAGCCCCTCTCACCCAGCTCATCCTaGTTCTCAGTCCCACCCATTTCCACGATACACAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: FRYRKPIEPLSPSSS*FSVPPISTIHKDSG
Trigger: GCCTGAGTCCTTGTGTATCGTGGAAATGGGTGGGACTGAGAAGCAGGATGAGCTGGGTGAGAGGGGCTCGATTGGCTTCCTATACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567250.5
CDS-3UTR CAA 90 bp TCTCGAAATAGACCAGCTCTCCTCCTGTCAGGGCAATCACCACTTGTCGCTGGTCAGGGCAATCACCACTaGTCGCTGGTTCACTGCACA +
Preference number: 5 (lower is better)
Translates to: SRNRPALLLSGQSPLVAGQGNHH*SLVHCT
Trigger: TGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTG...ACCAGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CAA 90 bp CTGGTGGCAGGCCCTCTGGCAGACTCACCTCACCACCAACCTCACAGCGACAGATTACACAGATGGGACTaGTCATTGAGTCACATCCAA +
Preference number: 5 (lower is better)
Translates to: LVAGPLADSPHHQPHSDRLHRWD*SLSHIQ
Trigger: TTGGATGTGACTCAATGACAAGTCCCATCTGTGTAA...TCTGTCGCTGTGAGGTTGGTGGTGAGGTGAGTCTGCCAGAGGGCCTGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTCTCAGTCATGTGCGTTaGTGCTACCATGACCCCAGG +
Preference number: 5 (lower is better)
Translates to: VTHTLCKALLENSAKALILSHVR*CYHDPR
Trigger: CCTGGGGTCATGGTAGCACAAACGCACATGACTGAG...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 90 bp GCACTAATCATAACGGCTCGCCCTTTGGGATCCACAGCTAAGAACTaGCCAGGAACGATGCGACGGCATCCACTCTTGCCAAAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: ALIITARPLGSTAKN*PGTMRRHPLLPKVS
Trigger: AGAAACCTTTGGCAAGAGTGGATGCCGTCGCATCGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGGCGAGCCGTTATGATTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 90 bp ACAAGGTGGTATAGACAAGTGATTCTGAGCCTCCAGGGATCAGCGTaGTCTTCTGCAAGGACAGCACCGTCTCCCCGACATGGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: TRWYRQVILSLQGSA*SSARTAPSPRHGSS
Trigger: TGAACTACCATGTCGGGGAGACGGTGCTGTCCTTGCAGAAGACCACGCTGATCCCTGGAGGCTCAGAATCACTTGTCTATACCACCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS-3UTR CAA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCAGTGGGAAGGCTACTaGATTGAAGACAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVQWEGY*IEDSTE
Trigger: CTCGGTGCTGTCTTCAATCAAGTAGCCTTCCCACTG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCAGTCTTCACCAGTGTaGGAAAACCTGCACACAGCC +
Preference number: 5 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVQSSPV*ENLHTA
Trigger: GGCTGTGTGCAGGTTTTCCAACACTGGTGAAGACTG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp TGGTCTTCTGCAAGGACAGCACCGTCTCCCCGACATGGTAGTTCATaGTCACCTCTGCCTGTGAGTCACAAACAGACTAGTGACTGTGTG +
Preference number: 5 (lower is better)
Translates to: WSSARTAPSPRHGSS*SPLPVSHKQTSDCV
Trigger: CACACAGTCACTAGTCTGTTTGTGACTCACAGGCAGAGGTGATCATGAACTACCATGTCGGGGAGACGGTGCTGTCCTTGCAGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565990.2
CDS GCA 90 bp CTTGAATGGGATTCATCACTCGGATCACAGAGGCCCACTGCCCATTaGCAGCCTTGGGAGCTCCAAAGATGGATTCAGGGAGGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LEWDSSLGSQRPTAH*QPWELQRWIQGGFH
Trigger: ATGAAAACCTCCCTGAATCCATCTTTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGATCCGAGTGATGAATCCCATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CCA 90 bp TTCACCAGCCACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTGACACCTCAA +
Preference number: 5 (lower is better)
Translates to: FTSHLQCVDALSRQR*GYQVAQKQPFLTPQ
Trigger: TTGAGGTGTCAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTGGCTGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAGTAGGGTATGTACTTaGCCAGTGTTGGGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWSRVCT*PVLGSG
Trigger: CCCAGACCCCAACACTGGCAAAGTACATACCCTACT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GCCGAATGCCATCTGGATAGACCTGCACCAAGGCATCATCTCCTAATAAGGAGCGGGGTCTTCCACTCATaGACTCTCTTGTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: AECHLDRPAPRHHLLIRSGVFHS*TLLSAR
Trigger: ACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCC...GCTCCTTATTAGGAGATGATGCCTTGGTGCAGGTCTATCCAGATGGCATTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CAA 90 bp ACCCCTGAGCACTCAGTCATGTGCGTTTGTGCTACCATGACCCCAGGAGACCGGTCTTCCACAGGAGTCTaGTGCAAAAACTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TPEHSVMCVCATMTPGDRSSTGV*CKNSSF
Trigger: AAAACTGGAGTTTTTGCACAAGACTCCTGTGGAAGA...CCGGTCTCCTGGGGTCATGGTAGCACAAACGCACATGACTGAGTGCTCAGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGCATATGTTGCCAAACTaGTCTGCCCCAGCCACAGTG +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWHMLPN*SAPATV
Trigger: CACTGTGGCTGGGGCAGACAAGTTTGGCAACATATG...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCAGGCAGGAAGATTTTTaGAGGTCAGGAGTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVRQEDF*RSGVRG
Trigger: GCCTCGAACTCCTGACCTCAAAAAATCTTCCTGCCT...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp TCAGGTTCCAACCAGATGATCCTTGAAGCTCAGAGTGTCACTCACTaGGGGATCCAGGGAGATGATTCTGACAGTGTTGTCCACAAGCCC +
Preference number: 5 (lower is better)
Translates to: SGSNQMILEAQSVTH*GIQGDDSDSVVHKP
Trigger: GGGCTTGTGGACAACACTGTCAGAATCATCTCCCTGGATCCCTCAGTGAGTGACACTCTGAGCTTCAAGGATCATCTGGTTGGAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568291.2
CDS CCA 90 bp CTGGCTAACACAGTGAAACCCCGTCTCTACCTGCAGCGAGAAGGATaGTGTGGATATCCAACGGATGCTACCTCCCTTCAAAACTTAAGC +
Preference number: 5 (lower is better)
Translates to: LANTVKPRLYLQREG*CGYPTDATSLQNLS
Trigger: GCTTAAGTTTTGAAGGGAGGTAGCATCCGTTGGATATCCACACCATCCTTCTCGCTGCAGGTAGAGACGGGGTTTCACTGTGTTAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566095.6
CDS-3UTR CAA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAACCAGACCTCCAGGCCTaGGTTACACCAACAGTACGG +
Preference number: 5 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKPDLQA*VTPTVR
Trigger: CCGTACTGTTGGTGTAACCAAGGCCTGGAGGTCTGG...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGCACTCATTGACTCTCTaGTCTGCTCGTATGTGCCGA +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWHSLTL*SARMCR
Trigger: TCGGCACATACGAGCAGACAAGAGAGTCAATGAGTG...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCCAGGGCAATCACCACTaGTCGCTGGTTCACTGCACA +
Preference number: 5 (lower is better)
Translates to: LGKRSSKGNICRTSASKVQGNHH*SLVHCT
Trigger: TGTGCAGTGAACCAGCGACAAGTGGTGATTGCCCTG...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGAAAATCCGTAGGGTGTaGGTGGAGATGGCCACAATG +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWKIRRV*VEMATM
Trigger: CATTGTGGCCATCTCCACCAACACCCTACGGATTTT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGTCTTCCTGCTCTAACTaGGGTTCAAACCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWSSCSN*GSNLPP
Trigger: AGGTGGGAGGTTTGAACCCAAGTTAGAGCAGGAAGA...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp AGGCAAAACCCGATGCAAATTCCAGTGTCTCGTAAGACAGTGGGGTaGGATGGAAGCGAGATTGGTAAGAATAGCTCAACCATGAGCGGC +
Preference number: 5 (lower is better)
Translates to: RQNPMQIPVSRKTVG*DGSEIGKNSSTMSG
Trigger: GCCGCTCATGGTTGAGCTATTCTTACCAATCTCGCTTCCATCTCACCCCACTGTCTTACGAGACACTGGAATTTGCATCGGGTTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS TCA 90 bp CAGCAGCACACCGTTCTAATCAAAAGGAGAGGAGCAGGTGAAGCCTaGTGGAAGCTTATCAGCTATGATGGGAAAACCTCTCCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: QQHTVLIKRRGAGEA*WKLISYDGKTSPLG
Trigger: ACCCAAGGGAGAGGTTTTCCCATCATAGCTGATAAGCTTCCATCAGGCTTCACCTGCTCCTCTCCTTTTGATTAGAACGGTGTGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568539.1
CDS CCA 90 bp AAAGCTGCTTACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTGACACCTCAA +
Preference number: 5 (lower is better)
Translates to: KAAYLQCVDALSRQR*GYQVAQKQPFLTPQ
Trigger: TTGAGGTGTCAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTAAGCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572365.1
CDS-3UTR CAA 90 bp CCAGGTGGGGAGAAGTGTAGCAAATCTCAGTGCCAATTTGAGGGGAAGCCAGTCCTCTGCAAGGTTAAGTaGTACAGAAACATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PGGEKCSKSQCQFEGKPVLCKVK*YRNMAA
Trigger: TGCAGCCATGTTTCTGTACAACTTAACCTTGCAGAG...GACTGGCTTCCCCTCAAATTGGCACTGAGATTTGCTACACTTCTCCCCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGGATACACTAAAGTGTTaGCTTTGTGGGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWDTLKC*LCGLPG
Trigger: CCCTGGAAGCCCACAAAGCAAACACTTTAGTGTATC...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGATGATTCTGACAGTGTaGTCCACAAGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWMILTV*STSPTA
Trigger: GGCTGTGGGGCTTGTGGACAACACTGTCAGAATCAT...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTCAACCATGAGCGGCTaGACATGGCCAATACTGCCT +
Preference number: 5 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWSTMSG*TWPILP
Trigger: AGGCAGTATTGGCCATGTCAAGCCGCTCATGGTTGA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCGGTCCCACAGGGCTTaGTTTCCTGTAGGATCCTCA +
Preference number: 5 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKRSHRA*FPVGSS
Trigger: TGAGGATCCTACAGGAAACAAAGCCCTGTGGGACCG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCGCTAAGGAGGATCGCTaGAGCTCAGGAGATAGAGGT +
Preference number: 5 (lower is better)
Translates to: LGKRSSKGNICRTSASKVAKEDR*SSGDRG
Trigger: ACCTCTATCTCCTGAGCTCAAGCGATCCTCCTTAGC...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCGCTGCCTCTTGGCATTaGGCAGGTGGAATCTCGTTT +
Preference number: 5 (lower is better)
Translates to: LGKRSSKGNICRTSASKVAASWH*AGGISF
Trigger: AAACGAGATTCCACCTGCCAAATGCCAAGAGGCAGC...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCCTCTCTGGGGCCTCTaGGCTTGGAATGATGCCCCT +
Preference number: 5 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYPLWGL*AWNDAP
Trigger: AGGGGCATCATTCCAAGCCAAGAGGCCCCAGAGAGG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTAACTCTGCCAAGGCGTaGATTCATCCGTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPNSAKA*IHPLGS
Trigger: GCTGCCCAACGGATGAATCAACGCCTTGGCAGAGTT...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS GCA 90 bp GGTATTGGTAGTGTGCATCACCAAGTACCAGCCAAGGTTAGTATTTaGCTGGAAGACTGCTGCATGTGCAGGCAGAAGGAATGTTCACTC +
Preference number: 5 (lower is better)
Translates to: GIGSVHHQVPAKVSI*LEDCCMCRQKECSL
Trigger: GAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTGGTGATGCACACTACCAATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CCA 90 bp CATCAAACTCATCTTCAATGTGTCGACGCACTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTGACACCTCAA +
Preference number: 5 (lower is better)
Translates to: HQTHLQCVDALSRQR*GYQVAQKQPFLTPQ
Trigger: TTGAGGTGTCAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGATGAGTTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTGTACTTTGCCAGTGTaGGGGTCTGGGCGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLCTLPV*GSGRSS
Trigger: GCTGCTTCGCCCAGACCCCAACACTGGCAAAGTACA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGATAACGGCTCGCCCTTaGGGATCCACAGCTAAGAAC +
Preference number: 5 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKITARP*GSTAKN
Trigger: GTTCTTAGCTGTGGATCCCAAAGGGCGAGCCGTTAT...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTCCGCCTCCTGGGAATaGGACAGCGGATATCTGGCT +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLSASWE*DSGYLA
Trigger: AGCCAGATATCCGCTGTCCAATTCCCAGGAGGCGGA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATTCTCCAGGGGGTACATaGGCCAGACTCATGCACACC +
Preference number: 5 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYSPGGT*ARLMHT
Trigger: GGTGTGCATGAGTCTGGCCAATGTACCCCCTGGAGA...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTACTGCCTCCTGGCCTaGCATTCGGACTCGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLYCLLA*HSDSEE
Trigger: CTCTTCCGAGTCCGAATGCAAGGCCAGGAGGCAGTA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTGAGACGTTCTTTTGTTaGTTGGGTTCCATGGAATTG +
Preference number: 5 (lower is better)
Translates to: VTHTLCKALLENSAKALIETFFC*LGSMEL
Trigger: CAATTCCATGGAACCCAACAAACAAAAGAACGTCTC...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGAATGCAGGGATGGCTTaGGGGAATGGGGGACTCAGG +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLNAGMA*GNGGLR
Trigger: CCTGAGTCCCCCATTCCCCAAAGCCATCCCTGCATT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp TGGATGACAAATTTCCTGGGTGTGTACTGCAGTGGGAAGGCTACTTaGTTGAAGACAGCACCGAGCTTCTCTAATGCCAAAATCCGTAGG +
Preference number: 5 (lower is better)
Translates to: WMTNFLGVYCSGKAT*LKTAPSFSNAKIRR
Trigger: CCTACGGATTTTGGCATTAGAGAAGCTCGGTGCTGTCTTCAATCAAGTAGCCTTCCCACTGCAGTACACACCCAGGAAATTTGTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS GCA 90 bp CATCACCAAGTACCAGCCAAGGTTAGTATTTGCCTGGAAGACTGCTaGATGTGCAGGCAGAAGGAATGTTCACTCAATAGTAACTTCGGG +
Preference number: 5 (lower is better)
Translates to: HHQVPAKVSICLEDC*MCRQKECSLNSNFG
Trigger: CCCGAAGTTACTATTGAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTGGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS-3UTR CAA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTTGTGGAGTATCTTCATaGGCCAGATCAGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPCGVSS*ARSAIW
Trigger: CCAGATAGCTGATCTGGCCAATGAAGATACTCCACA...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GTCACACACACTCTCTGCAAGGCCCTGCTGGAAAACTCTGCCAAGGCGTTGATTTCAATGATAATAAGGTaGTTACTCTCAGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: VTHTLCKALLENSAKALISMIIR*LLSGWM
Trigger: CATCCACCCTGAGAGTAACAACCTTATTATCATTGA...AATCAACGCCTTGGCAGAGTTTTCCAGCAGGGCCTTGCAGAGAGTGTGTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAGTCCAGTGTGTTCCCTaGAATGGGATTCATCACTCG +
Preference number: 5 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKVQCVP*NGIHHS
Trigger: CGAGTGATGAATCCCATTCAAGGGAACACACTGGAC...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGTCATCTACTTCATCATaGGTGTTAGGTGGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELSSTSS*VLGGSL
Trigger: GAGGCTCCCACCTAACACCAATGATGAAGTAGATGA...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS GCA 90 bp CAAGTACCAGCCAAGGTTAGTATTTGCCTGGAAGACTGCTGCATGTaGAGGCAGAAGGAATGTTCACTCAATAGTAACTTCGGGTATCTG +
Preference number: 5 (lower is better)
Translates to: QVPAKVSICLEDCCM*RQKECSLNSNFGYL
Trigger: CAGATACCCGAAGTTACTATTGAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS GCA 90 bp GTGCATCACCAAGTACCAGCCAAGGTTAGTATTTGCCTGGAAGACTaGTGCATGTGCAGGCAGAAGGAATGTTCACTCAATAGTAACTTC +
Preference number: 5 (lower is better)
Translates to: VHHQVPAKVSICLED*CMCRQKECSLNSNF
Trigger: GAAGTTACTATTGAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTGGTGATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CCA 90 bp GTCATCCAGGTCATTCCGCCTCCTGGGAATTGGACAGCGGATATCTaGCTGGTCACCAAAGTTCTTGTAAGTAATATAGTTTTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VIQVIPPPGNWTADI*LVTKVLVSNIVFRA
Trigger: TGCTCTGAAAACTATATTACTTACAAGAACTTTGGTGACCAGCCAGATATCCGCTGTCCAATTCCCAGGAGGCGGAATGACCTGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 90 bp TTGGTAGTGTGCATCACCAAGTACCAGCCAAGGTTAGTATTTGCCTaGAAGACTGCTGCATGTGCAGGCAGAAGGAATGTTCACTCAATA +
Preference number: 5 (lower is better)
Translates to: LVVCITKYQPRLVFA*KTAACAGRRNVHSI
Trigger: TATTGAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTGGTGATGCACACTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS-3UTR CAA 90 bp AATGCAGTCTTAATTATCCAGTCACCCTCCTGCCACATGGCAGAAGCCAGGTGGACAGTATCAAAATATTaGAGCCGGATCTCAGTAACC +
Preference number: 5 (lower is better)
Translates to: NAVLIIQSPSCHMAEARWTVSKY*SRISVT
Trigger: GGTTACTGAGATCCGGCTCAAATATTTTGATACTGT...CCACCTGGCTTCTGCCATGTGGCAGGAGGGTGACTGGATAATTAAGACTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAGAGTCAGTCACTTCTTCTACAGTTTCTCCAATGGACAACACTAGGGTGGCATTGTGGAGTATCTTCATaGGCCAGATCAGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: QSQSLLLQFLQWTTLGWHCGVSS*ARSAIW
Trigger: CCAGATAGCTGATCTGGCCAATGAAGATACTCCACA...ATGCCACCCTAGTGTTGTCCATTGGAGAAACTGTAGAAGAAGTGACTGACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CAA 90 bp ACAGTTTCTCCAATGGACAACACTAGGGTGGCATTCACGAAAGACACAATGATGCACTCATTGACTCTCTaGTCTGCTCGTATGTGCCGA +
Preference number: 5 (lower is better)
Translates to: TVSPMDNTRVAFTKDTMMHSLTL*SARMCR
Trigger: TCGGCACATACGAGCAGACAAGAGAGTCAATGAGTG...CATCATTGTGTCTTTCGTGAATGCCACCCTAGTGTTGTCCATTGGAGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGGGGGTCTTCCACTCATaGACTCTCTTGTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLGVFHS*TLLSAR
Trigger: ACGAGCAGACAAGAGAGTCAATGAGTGGAAGACCCC...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp ACACAACTAAACAGGAGGAATTCTCAGGGGTGGGCTGGAACATTTCTGGAACTGGAGATGGAAGCGAGATaGGTAAGAATAGCTCAACCA +
Preference number: 5 (lower is better)
Translates to: TQLNRRNSQGWAGTFLELEMEAR*VRIAQP
Trigger: TGGTTGAGCTATTCTTACCAATCTCGCTTCCATCTC...CAGTTCCAGAAATGTTCCAGCCCACCCCTGAGAATTCCTCCTGTTTAGTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATTTTAGTATCAGGTCCTaGGCCACACCCACCAGCACA +
Preference number: 5 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYFSIRS*ATPTST
Trigger: TGTGCTGGTGGGTGTGGCCAAGGACCTGATACTAAA...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGCTCACCACACATATGTaGCCAAACTTGTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRLTTHM*PNLSAP
Trigger: TGGGGCAGACAAGTTTGGCAACATATGTGTGGTGAG...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTTGGGTTCCATGGAATaGAACTGCTCACAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKLGSME*NCSQRS
Trigger: AGACCTCTGTGAGCAGTTCAATTCCATGGAACCCAA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAAATCTCAGTGCCAATTaGAGGGGAAGCCAGTCATTC +
Preference number: 5 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKNLSAN*RGSQSF
Trigger: GAATGACTGGCTTCCCCTCAAATTGGCACTGAGATT...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GCAGGTGTTTTAAGAGTCCCTATCTTGTCCTCGAGAGCCATCTATTCCTTTCCTGGTTTTGCCCTGAACTaGCAACAGGACAATAATGCC +
Preference number: 5 (lower is better)
Translates to: AGVLRVPILSSRAIYSFPGFALN*QQDNNA
Trigger: GGCATTATTGTCCTGTTGCAAGTTCAGGGCAAAACC...AGGAAAGGAATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAAAACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp TTTCTCCAATGGACAACACTAGGGTGGCATTCACGAAAGACACAATaGTGTAGGCATCAAACTCATCTTCAATGTGTCGACGCACTGTCC +
Preference number: 5 (lower is better)
Translates to: FLQWTTLGWHSRKTQ*CRHQTHLQCVDALS
Trigger: GGACAGTGCGTCGACACATTGAAGATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGAATGCCACCCTAGTGTTGTCCATTGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGTCAGGGAGGTTTTCATaGAGGAATGCTGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLSGRFS*RNAAAI
Trigger: GATGGCAGCAGCATTCCTCAATGAAAACCTCCCTGA...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp AACTTGGGTTCAAACCTCCCACCTACATCCTCATCTCCAGAACAAGACACATGGTCTCTATTTACCTGGTaGCTCAATCAAACCACAGGA +
Preference number: 5 (lower is better)
Translates to: NLGSNLPPTSSSPEQDTWSLFTW*LNQTTG
Trigger: TCCTGTGGTTTGATTGAGCAACCAGGTAAATAGAGA...CCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGGGAGGTTTGAACCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTTAAGAGTCCCTATCTaGTCCTCGAGAGCCATCTAT +
Preference number: 5 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKLRVPI*SSRAIY
Trigger: ATAGATGGCTCTCGAGGACAAGATAGGGACTCTTAA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATCTCTCTTCATGGACTTaGCTGCCTCTTGGCATTTGG +
Preference number: 5 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYLSSWT*LPLGIW
Trigger: CCAAATGCCAAGAGGCAGCAAAGTCCATGAAGAGAG...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp CTGTCCAACTCATCAACCAGCACAAGGTTTTTAAGTGGTCTTGGCTaGAAAAAGAATGTGTCTCCTTCTTCCAGAGGCATGGCTGATGAA +
Preference number: 5 (lower is better)
Translates to: LSNSSTSTRFLSGLG*KKNVSPSSRGMADE
Trigger: TTCATCAGCCATGCCTCTGGAAGAAGGAGACACATTCTTTTTTCAGCCAAGACCACTTAAAAACCTTGTGCTGGTTGATGAGTTGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000572365.1
CDS GCA 90 bp TCAGATCATATCCTTAAACCACAGCAGGAAACTCCTGAAACACACTaGAATGACAAGAGAAGCAGCAGGTATGGATTCTGGGTTCTAACC +
Preference number: 5 (lower is better)
Translates to: SDHILKPQQETPETH*NDKRSSRYGFWVLT
Trigger: GGTTAGAACCCAGAATCCATACCTGCTGCTTCTCTTGTCATTGCAGTGTGTTTCAGGAGTTTCCTGCTGTGGTTTAAGGATATGATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568291.2
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGACTAAAGTGTTTGCTTaGTGGGCTTCCAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLTKVFA*WASRGD
Trigger: ATCTCCCCTGGAAGCCCACAAAGCAAACACTTTAGT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGACTGTAATAAGGAAGTaGCCGTGTTCCTCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRTVIRK*PCSSKG
Trigger: ACCTTTGGAGGAACACGGCAACTTCCTTATTACAGT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp GCATTTGGCAGGTGGAATCTCGTTTCTGATTGCTTTATGAGGGCAGCATTGCCTAAGAAGAACATCGATTaGGTTTTATGGGTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: AFGRWNLVSDCFMRAALPKKNID*VLWVAE
Trigger: CTCTGCAACCCATAAAACCAAATCGATGTTCTTCTT...AGGCAATGCTGCCCTCATAAAGCAATCAGAAACGAGATTCCACCTGCCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGTTCAGAGACGTTCTTTaGTTTGTTGGGTTCCATGGA +
Preference number: 5 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKFRDVL*FVGFHG
Trigger: TCCATGGAACCCAACAAACAAAAGAACGTCTCTGAA...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp TTTTCAGTCCTAGGATCCAAGTCACAAGGGCTTAGCAATGGAACAGGATGGAAGCTTGCCAAAGGTTTCTaGGTGAATCTTCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: FSVLGSKSQGLSNGTGWKLAKGF*VNLLKH
Trigger: ATGTTTGAGAAGATTCACCAAGAAACCTTTGGCAAG...CTTCCATCCTGTTCCATTGCTAAGCCCTTGTGACTTGGATCCTAGGACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CTTGGCAAGAGATCTTCCAAAGGAAACATCTGCAGAACCTCTGCCAGTAAGGTCTACATTTGTGAAGTATaGAGAACAGTGAGCTCACTT +
Preference number: 5 (lower is better)
Translates to: LGKRSSKGNICRTSASKVYICEV*RTVSSL
Trigger: AAGTGAGCTCACTGTTCTCAATACTTCACAAATGTA...GACCTTACTGGCAGAGGTTCTGCAGATGTTTCCTTTGGAAGATCTCTTGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGAAACCTGGGTCTCTCTaGACTGATCTAAAACCAAGT +
Preference number: 5 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRKPGSL*TDLKPS
Trigger: ACTTGGTTTTAGATCAGTCAAGAGAGACCCAGGTTT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CCACCTACATCCTCATCTCCAGAACAAGACACATGGATGCCAGTCACCTTAAAAAAAGGAATGCTATTCTaGGCAAGAGATCTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PPTSSSPEQDTWMPVTLKKGMLF*ARDLPK
Trigger: CTTTGGAAGATCTCTTGCCAAGAATAGCATTCCTTT...TTTTAAGGTGACTGGCATCCATGTGTCTTGTTCTGGAGATGAGGATGTAGGTGG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGAAAGAGAAACAACTCTaGGTTGTGCTGGTTCAGACT +
Preference number: 5 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRKEKQL*VVLVQT
Trigger: AGTCTGAACCAGCACAACCAAGAGTTGTTTCTCTTT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp TTTCTTGTTGTTTGGTTCCAGAAAAGTTTCCATGAATGGCAAAGCTaGTGCCAGTGGCTCTCTGCAAGGTTAAGTTGTACAGAAACATGG +
Preference number: 5 (lower is better)
Translates to: FLVVWFQKSFHEWQS*CQWLSARLSCTETW
Trigger: CCATGTTTCTGTACAACTTAACCTTGCAGAGAGCCACTGGCATCAGCTTTGCCATTCATGGAAACTTTTCTGGAACCAAACAACAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000566095.6
ENST00000577085.1
CDS-3UTR CAA 90 bp GATCACTCAAATGTCAATCAACCATGGCCAAGCAGGTGTTTTAAGAGTCCCTATATCTCCCTGCTCAGTTaGAGCCAAAAAGAAGAACAT +
Preference number: 5 (lower is better)
Translates to: DHSNVNQPWPSRCFKSPYISLLS*SQKEEH
Trigger: ATGTTCTTCTTTTTGGCTCAAACTGAGCAGGGAGAT...ATAGGGACTCTTAAAACACCTGCTTGGCCATGGTTGATTGACATTTGAGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGAAGCAGCAATGTTCATaGTCCATCACAGCTACTGAT +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLKQQCS*SITATD
Trigger: ATCAGTAGCTGTGATGGACAATGAACATTGCTGCTT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp CAAGCAAACATTGGATTTTCAAATCCGACATCTACTCCAACTACATaGTACACTAAAGTGTTTGCTTTGTGGGCTTCCAGGGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: QANIGFSNPTSTPTT*YTKVFALWASRGDE
Trigger: TTCATCTCCCCTGGAAGCCCACAAAGCAAACACTTTAGTGTATCATGTAGTTGGAGTAGATGTCGGATTTGAAAATCCAATGTTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 90 bp AAGGAATGTTCACTCAATAGTAACTTCGGGTATCTGGAAAGTGAGTaGACCAACAGAACCCGACCTGTATTTATAGGTGACTCCCAAATT +
Preference number: 5 (lower is better)
Translates to: KECSLNSNFGYLESE*TNRTRPVFIGDSQI
Trigger: AATTTGGGAGTCACCTATAAATACAGGTCGGGTTCTGTTGGTTCACTCACTTTCCAGATACCCGAAGTTACTATTGAGTGAACATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGCCAGACAAGCAAACATaGGATTTTCAAATCCGACAT +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLPDKQT*DFQIRH
Trigger: ATGTCGGATTTGAAAATCCAATGTTTGCTTGTCTGG...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTCATGATTCAAGAGATACTTAGTTCCAGGAGACAGTGTCACAGTGTCAGGATTTGGTTTTATGGGTaGCAGAGCAGACAAAAATCA +
Preference number: 5 (lower is better)
Translates to: QVMIQEILSSRRQCHSVRIWFYG*QSRQKS
Trigger: TGATTTTTGTCTGCTCTGCAACCCATAAAACCAAAT...CCTGACACTGTGACACTGTCTCCTGGAACTAAGTATCTCTTGAATCATGACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGACGTTCTTTTGTTTGTaGGGTTCCATGGAATTGAAC +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLTFFCL*GSMELN
Trigger: GTTCAATTCCATGGAACCCAACAAACAAAAGAACGT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGAGATGGGACTTGTCATaGAGTCACATCCAATCTAAT +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLRWDLS*SHIQSN
Trigger: ATTAGATTGGATGTGACTCAATGACAAGTCCCATCT...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS-3UTR CAA 90 bp CAAGTATCTACGCTGAGTTCCTCAGATGACTGCATGTCAGTATCACACAATTTGCCAGATGAAACTTTCTaGGACATCAGATACAATTAC +
Preference number: 5 (lower is better)
Translates to: QVSTLSSSDDCMSVSHNLPDETF*DIRYNY
Trigger: GTAATTGTATCTGATGTCCAAGAAAGTTTCATCTGG...CAAATTGTGTGATACTGACATGCAGTCATCTGAGGAACTCAGCGTAGATACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp CAGACTAGTGACTGTGTGCACCCTCAGGAGCCTCCCTaGACTCCCAAGGGCAAGCAGTGCTCCCTAAGGCAC +
Preference number: 6 (lower is better)
Translates to: QTSDCVHPQEPP*TPKGKQCSLRH
Trigger: GTGCCTTAGGGAGCACTGCTTGCCCTTGGGAGTCCAGGGAGGCTCCTGAGGGTGCACACAGTCACTAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565990.2
CDS GCA 72 bp GAGCGGCTTGACATGGCCAATACTGCCTCCTGGCCTTaGATTCGGACTCGGAAGAGCTTCACAGGACGGGAC +
Preference number: 6 (lower is better)
Translates to: ERLDMANTASWP*IRTRKSFTGRD
Trigger: GTCCCGTCCTGTGAAGCTCTTCCGAGTCCGAATGCAAGGCCAGGAGGCAGTATTGGCCATGTCAAGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000568539.1
CDS CCA 72 bp CCCCTGCCACAGATCGGGGGTTTAGTATCAGGTCCTTaGCCACACCCACCAGCACATACCAGTCTTCACCAG +
Preference number: 6 (lower is better)
Translates to: PLPQIGGLVSGP*PHPPAHTSLHQ
Trigger: CTGGTGAAGACTGGTATGTGCTGGTGGGTGTGGCCAAGGACCTGATACTAAACCCCCGATCTGTGGCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CAA 72 bp CAGTCTGAGGGATCCAGGGAGATGATTCTGACAGTGTaGTCCACAAGCCCCACAGCCAGGAAGCGAGACCGC +
Preference number: 6 (lower is better)
Translates to: QSEGSREMILTV*STSPTARKRDR
Trigger: GCGGTCTCGCTTCCTGGCTGTGGGGCTTGTGGACAACACTGTCAGAATCATCTCCCTGGATCCCTCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567250.5
CDS CAA 72 bp CCCCCTGCCACAGATCGGGGGTTTAGTATCAGGTCCTaGGCCACACCCACCAGCACATACCAGTCTTCACCA +
Preference number: 6 (lower is better)
Translates to: PPATDRGFSIRS*ATPTSTYQSSP
Trigger: TGGTGAAGACTGGTATGTGCTGGTGGGTGTGGCCAAGGACCTGATACTAAACCCCCGATCTGTGGCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CAA 72 bp CTCACTGAGGGATCCAGGGAGATGATTCTGACAGTGTaGTCCACAAGCCCCACAGCCAGGAAGCGAGACCGC +
Preference number: 6 (lower is better)
Translates to: LTEGSREMILTV*STSPTARKRDR
Trigger: GCGGTCTCGCTTCCTGGCTGTGGGGCTTGTGGACAACACTGTCAGAATCATCTCCCTGGATCCCTCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568291.2
CDS TCA 72 bp CCAGGTACCGAGTGCGAGTATCAGACAAATCCCCAGTaGCAGGGTCCAAGACAGTCCTCAGCAGCACACCGT +
Preference number: 6 (lower is better)
Translates to: PGTECEYQTNPQ*QGPRQSSAAHR
Trigger: ACGGTGTGCTGCTGAGGACTGTCTTGGACCCTGTCACTGGGGATTTGTCTGATACTCGCACTCGGTACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000568539.1
CDS GCA 72 bp ACCGCTGCTCTCCAGGGGGTACATTGGCCAGACTCATaGACACCACATCTGCTGACATCTCCTTCCGTTCTG +
Preference number: 6 (lower is better)
Translates to: TAALQGVHWPDS*TPHLLTSPSVL
Trigger: CAGAACGGAAGGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAATGTACCCCCTGGAGAGCAGCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000567250.5
ENST00000568291.2
CDS GCA 72 bp TACACAAGGACTCAGGCTGGGCTGGGAGAGCCTGCATaGTTAGAGGTTGCAAACAGTCTGAGGGATCCAGGG +
Preference number: 6 (lower is better)
Translates to: YTRTQAGLGEPA*LEVANSLRDPG
Trigger: CCCTGGATCCCTCAGACTGTTTGCAACCTCTAAGCATGCAGGCTCTCCCAGCCCAGCCTGAGTCCTTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567250.5
CDS GCA 72 bp TGGGAGCCTCACCACACATATGTTGCCAAACTTGTCTaGCCCAGCCACAGTGTCATAGTCCAGGAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: WEPHHTYVAKLV*PSHSVIVQEAG
Trigger: GCCAGCCTCCTGGACTATGACACTGTGGCTGGGGCAGACAAGTTTGGCAACATATGTGTGGTGAGGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS GCA 72 bp TCCCGCCCACAGAGAGGGGGATGTTCAGACCGCAGGTaGATTTCCACATGCTGGAAGAAGTCATGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SRPQRGGCSDRR*ISTCWKKSWSS
Trigger: TGAGGACCATGACTTCTTCCAGCATGTGGAAATGCACCTGCGGTCTGAACATCCCCCTCTCTGTGGGCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CCA 72 bp ATAACGGCTCGCCCTTTGGGATCCACAGCTAAGAACTaGCCAGGAACGATGCGACGGCATCCACTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: ITARPLGSTAKN*PGTMRRHPLLP
Trigger: TGGCAAGAGTGGATGCCGTCGCATCGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGGCGAGCCGTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp AGAAGGCGTAGCGGGTCCGGATATCCTCGAGTTTCTTaGACACTTCGGGTGGGGTTCGGTCCAGTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: RRRSGSGYPRVS*TLRVGFGPVLQ
Trigger: CTGAAGAACTGGACCGAACCCCACCCGAAGTGTCCAAGAAACTCGAGGATATCCGGACCCGCTACGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CAA 90 bp AGAAACATGGCTGCAGGAAACCTGAGCCACCCAGACCTCCAGGCCTaGGTTACACCAACAGTACGGAGTCCAAGAAAGCCTGCAGCGAGA +
Preference number: 6 (lower is better)
Translates to: RNMAAGNLSHPDLQA*VTPTVRSPRKPAAR
Trigger: TCTCGCTGCAGGCTTTCTTGGACTCCGTACTGTTGGTGTAACCAAGGCCTGGAGGTCTGGGTGGCTCAGGTTTCCTGCAGCCATGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 90 bp AGAAACATGGCTGCAGGAAACCTGAGCCACCCAGACCTCCAGGCCTaGGTTACACCAACAGTACGGAGTCCAAGAAAGCTCCTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RNMAAGNLSHPDLQA*VTPTVRSPRKLLLV
Trigger: GACCAGGAGGAGCTTTCTTGGACTCCGTACTGTTGGTGTAACCAAGGCCTGGAGGTCTGGGTGGCTCAGGTTTCCTGCAGCCATGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577085.1
CDS TCA 72 bp TGGGAGCTCCAAAGATGGATTCAGGGAGGTTTTCATTaGGGAATGCTGCTGCCATCTCTGCGGCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: WELQRWIQGGFH*GMLLPSLRPAP
Trigger: GGGAGCTGGCCGCAGAGATGGCAGCAGCATTCCTCAATGAAAACCTCCCTGAATCCATCTTTGGAGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS TCA 72 bp TCACATTCTTCACAGGGAAGTAGTAGGAGCGAAAGCTaGGGTGGTCCCGCCCACAGAGAGGGGGATGTTCAG +
Preference number: 6 (lower is better)
Translates to: SHSSQGSSRSES*GGPAHREGDVQ
Trigger: CTGAACATCCCCCTCTCTGTGGGCGGGACCACCTCAGCTTTCGCTCCTACTACTTCCCTGTGAAGAATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS GCA 72 bp ACGATACACAAGGACTCAGGCTGGGCTGGGAGAGCCTaGATGCTTAGAGGTTGCAAACAGTCTGAGGGATCC +
Preference number: 6 (lower is better)
Translates to: TIHKDSGWAGRA*MLRGCKQSEGS
Trigger: GGATCCCTCAGACTGTTTGCAACCTCTAAGCATGCAGGCTCTCCCAGCCCAGCCTGAGTCCTTGTGTATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567250.5
CDS GCA 72 bp AGGAAGCCAATCGAGCCCCTCTCACCCAGCTCATCCTaGTTCTCAGTCCCACCCATTTCCACGATACACAAG +
Preference number: 6 (lower is better)
Translates to: RKPIEPLSPSSS*FSVPPISTIHK
Trigger: CTTGTGTATCGTGGAAATGGGTGGGACTGAGAAGCAGGATGAGCTGGGTGAGAGGGGCTCGATTGGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567250.5
CDS GCA 72 bp GATTCATCACTCGGATCACAGAGGCCCACTGCCCATTaGCAGCCTTGGGAGCTCCAAAGATGGATTCAGGGA +
Preference number: 6 (lower is better)
Translates to: DSSLGSQRPTAH*QPWELQRWIQG
Trigger: TCCCTGAATCCATCTTTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGATCCGAGTGATGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CCA 72 bp CGAGCTTCTCTAATGCCAAAATCCGTAGGGTGTTGGTaGAGATGGCCACAATGCCCTCGGGACACTGTTCCG +
Preference number: 6 (lower is better)
Translates to: RASLMPKSVGCW*RWPQCPRDTVP
Trigger: CGGAACAGTGTCCCGAGGGCATTGTGGCCATCTCCACCAACACCCTACGGATTTTGGCATTAGAGAAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS CCA 72 bp GGGGGATGTTCAGACCGCAGGTGCATTTCCACATGCTaGAAGAAGTCATGGTCCTCATGGGACGTGAATGGC +
Preference number: 6 (lower is better)
Translates to: GGCSDRRCISTC*KKSWSSWDVNG
Trigger: GCCATTCACGTCCCATGAGGACCATGACTTCTTCCAGCATGTGGAAATGCACCTGCGGTCTGAACATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS TCA 72 bp AAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTaGAACCCCGTCTCTACCTGCAGCGAGAAGGATGGT +
Preference number: 6 (lower is better)
Translates to: KVRRSRPSWLTQ*NPVSTCSEKDG
Trigger: ACCATCCTTCTCGCTGCAGGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566095.6
CDS GCA 72 bp AATGCCCTCGGGACACTGTTCCGAGGCAAAACCCGATaGAAATTCCAGTGTCTCGTAAGACAGTGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: NALGTLFRGKTR*KFQCLVRQWGE
Trigger: CTCACCCCACTGTCTTACGAGACACTGGAATTTGCATCGGGTTTTGCCTCGGAACAGTGTCCCGAGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS CCA 72 bp TCTCTAATGCCAAAATCCGTAGGGTGTTGGTGGAGATaGCCACAATGCCCTCGGGACACTGTTCCGAGGCAA +
Preference number: 6 (lower is better)
Translates to: SLMPKSVGCWWR*PQCPRDTVPRQ
Trigger: TTGCCTCGGAACAGTGTCCCGAGGGCATTGTGGCCATCTCCACCAACACCCTACGGATTTTGGCATTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS CAA 72 bp GCCACACCCACCAGCACATACCAGTCTTCACCAGTGTaGGAAAACCTGCACACAGCCACACTAAAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: ATPTSTYQSSPV*ENLHTATLKAA
Trigger: GGCAGCTTTTAGTGTGGCTGTGTGCAGGTTTTCCAACACTGGTGAAGACTGGTATGTGCTGGTGGGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CAA 90 bp AGCTGCCTCATTCTGTTCCAGCTGGACAAGGTCCAGTGTGTTCCCTaGAATGGGATTCATCACTCGGATCACAGAGGCCCACTGCCCATT +
Preference number: 6 (lower is better)
Translates to: SCLILFQLDKVQCVP*NGIHHSDHRGPLPI
Trigger: AATGGGCAGTGGGCCTCTGTGATCCGAGTGATGAATCCCATTCAAGGGAACACACTGGACCTTGTCCAGCTGGAACAGAATGAGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CAA 90 bp CTTCACCAGCCACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTGACACCTCA +
Preference number: 6 (lower is better)
Translates to: LHQPPSMCRRTVQTA*GLPGSSETAISDTS
Trigger: TGAGGTGTCAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTGGCTGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS TCA 72 bp CTCCCCGACATGGTAGTTCATGATCACCTCTGCCTGTaGGTCACAAACAGACTAGTGACTGTGTGCACCCTC +
Preference number: 6 (lower is better)
Translates to: LPDMVVHDHLCL*VTNRLVTVCTL
Trigger: GAGGGTGCACACAGTCACTAGTCTGTTTGTGACTCACAGGCAGAGGTGATCATGAACTACCATGTCGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565990.2
CDS TCA 72 bp GCAAGGACAGCACCGTCTCCCCGACATGGTAGTTCATaGTCACCTCTGCCTGTGAGTCACAAACAGACTAGT +
Preference number: 6 (lower is better)
Translates to: ARTAPSPRHGSS*SPLPVSHKQTS
Trigger: ACTAGTCTGTTTGTGACTCACAGGCAGAGGTGATCATGAACTACCATGTCGGGGAGACGGTGCTGTCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565990.2
CDS GCA 72 bp AGAGGGGGATGTTCAGACCGCAGGTGCATTTCCACATaGTGGAAGAAGTCATGGTCCTCATGGGACGTGAAT +
Preference number: 6 (lower is better)
Translates to: RGGCSDRRCIST*WKKSWSSWDVN
Trigger: ATTCACGTCCCATGAGGACCATGACTTCTTCCAGCATGTGGAAATGCACCTGCGGTCTGAACATCCCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CCA 72 bp TTCAGGGTCATCCAGGTCATTCCGCCTCCTGGGAATTaGACAGCGGATATCTGGCTGGTCACCAAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: FRVIQVIPPPGN*TADIWLVTKVL
Trigger: AAGAACTTTGGTGACCAGCCAGATATCCGCTGTCCAATTCCCAGGAGGCGGAATGACCTGGATGACCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp GGTCCGGATATCCTCGAGTTTCTTGGACACTTCGGGTaGGGTTCGGTCCAGTTCTTCAGAGACGTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GPDILEFLGHFG*GSVQFFRDVLL
Trigger: CAAAAGAACGTCTCTGAAGAACTGGACCGAACCCCACCCGAAGTGTCCAAGAAACTCGAGGATATCCGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CCA 72 bp CACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTG +
Preference number: 6 (lower is better)
Translates to: HLQCVDALSRQR*GYQVAQKQPFL
Trigger: CAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS CAA 72 bp ACTTCCACAGTGAGTAGGGTATGTACTTTGCCAGTGTaGGGGTCTGGGCGAAGCAGCTCCAAGATCTTCCCA +
Preference number: 6 (lower is better)
Translates to: TSTVSRVCTLPV*GSGRSSSKIFP
Trigger: TGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAACACTGGCAAAGTACATACCCTACTCACTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302516.10
ENST00000567654.1
ENST00000569687.1
ENST00000577085.1
CDS CAA 72 bp ACACCGAATACTTCCACAGTGAGTAGGGTATGTACTTaGCCAGTGTTGGGGTCTGGGCGAAGCAGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: TPNTSTVSRVCT*PVLGSGRSSSK
Trigger: CTTGGAGCTGCTTCGCCCAGACCCCAACACTGGCAAAGTACATACCCTACTCACTGTGGAAGTATTCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302516.10
ENST00000567654.1
ENST00000569687.1
ENST00000577085.1
CDS CAA 72 bp TTTCAGGGTCATCCAGGTCATTCCGCCTCCTGGGAATaGGACAGCGGATATCTGGCTGGTCACCAAAGTTCT +
Preference number: 6 (lower is better)
Translates to: FQGHPGHSASWE*DSGYLAGHQSS
Trigger: AGAACTTTGGTGACCAGCCAGATATCCGCTGTCCAATTCCCAGGAGGCGGAATGACCTGGATGACCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 72 bp CCACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCAGAAACAGCCATTTCT +
Preference number: 6 (lower is better)
Translates to: PPSMCRRTVQTA*GLPGSSETAIS
Trigger: AGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567635.5
CDS CAA 90 bp ACACCGAATACTTCCACAGTGAGTAGGGTATGTACTTTGCCAGTGTaGGGGTCTGGGCGAAGCAGCTCCAAGATCTTCCCACGGGAAACA +
Preference number: 6 (lower is better)
Translates to: TPNTSTVSRVCTLPV*GSGRSSSKIFPRET
Trigger: TGTTTCCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAACACTGGCAAAGTACATACCCTACTCACTGTGGAAGTATTCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302516.10
ENST00000567654.1
ENST00000569687.1
ENST00000577085.1
CDS CAA 90 bp GACCGGATAACACCGAATACTTCCACAGTGAGTAGGGTATGTACTTaGCCAGTGTTGGGGTCTGGGCGAAGCAGCTCCAAGATCTTCCCA +
Preference number: 6 (lower is better)
Translates to: DRITPNTSTVSRVCT*PVLGSGRSSSKIFP
Trigger: TGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAACACTGGCAAAGTACATACCCTACTCACTGTGGAAGTATTCGGTGTTATCCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302516.10
ENST00000567654.1
ENST00000569687.1
ENST00000577085.1
CDS CAA 90 bp AGGTCCTTGGCCACACCCACCAGCACATACCAGTCTTCACCAGTGTaGGAAAACCTGCACACAGCCACACTAAAAGCTGCCTCATTCTGT +
Preference number: 6 (lower is better)
Translates to: RSLATPTSTYQSSPV*ENLHTATLKAASFC
Trigger: ACAGAATGAGGCAGCTTTTAGTGTGGCTGTGTGCAGGTTTTCCAACACTGGTGAAGACTGGTATGTGCTGGTGGGTGTGGCCAAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
CDS CAA 90 bp GGACACTTCGGGTGGGGTTCGGTCCAGTTCTTCAGAGACGTTCTTTaGTTTGTTGGGTTCCATGGAATTGAACTGCTCACAGAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GHFGWGSVQFFRDVL*FVGFHGIELLTEVS
Trigger: GGAGACCTCTGTGAGCAGTTCAATTCCATGGAACCCAACAAACAAAAGAACGTCTCTGAAGAACTGGACCGAACCCCACCCGAAGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS TCA 72 bp GGGTACATTGGCCAGACTCATGCACACCACATCTGCTaGCATCTCCTTCCGTTCTGTGTACTCATTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GYIGQTHAHHIC*HLLPFCVLIQL
Trigger: CAGCTGAATGAGTACACAGAACGGAAGGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAATGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000567250.5
ENST00000568291.2
CDS GCA 72 bp CCTGCAGCGAGAAGGATGGTGTGGATATCCAACGGATaGTACCTCCCTTCAAAACTTAAGCCACCACCAACT +
Preference number: 6 (lower is better)
Translates to: PAARRMVWISNG*YLPSKLKPPPT
Trigger: AGTTGGTGGTGGCTTAAGTTTTGAAGGGAGGTAGCATCCGTTGGATATCCACACCATCCTTCTCGCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000566095.6
ENST00000577085.1
CDS CCA 72 bp CGGAGTCCAAGAAAGCCTGCAGCGAGAAGGATGGTGTaGATATCCAACGGATGCTACCTCCCTTCAAAACTT +
Preference number: 6 (lower is better)
Translates to: RSPRKPAARRMV*ISNGCYLPSKL
Trigger: AAGTTTTGAAGGGAGGTAGCATCCGTTGGATATCCACACCATCCTTCTCGCTGCAGGCTTTCTTGGACTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp CATCTTCAATGTGTCGACGCACTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTG +
Preference number: 6 (lower is better)
Translates to: HLQCVDALSRQR*GYQVAQKQPFL
Trigger: CAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp ATGCTGGAAGAAGTCATGGTCCTCATGGGACGTGAATaGCACAAGGATGCCAATTCCTCCAGACAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: MLEEVMVLMGRE*HKDANSSRQGG
Trigger: ACCACCTTGTCTGGAGGAATTGGCATCCTTGTGCCATTCACGTCCCATGAGGACCATGACTTCTTCCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CCA 72 bp GAAACCCCGTCTCTACCTGCAGCGAGAAGGATGGTGTaGATATCCAACGGATGCTACCTCCCTTCAAAACTT +
Preference number: 6 (lower is better)
Translates to: ETPSLPAARRMV*ISNGCYLPSKL
Trigger: AAGTTTTGAAGGGAGGTAGCATCCGTTGGATATCCACACCATCCTTCTCGCTGCAGGTAGAGACGGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566095.6
CDS CCA 72 bp TACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTTaGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTG +
Preference number: 6 (lower is better)
Translates to: YLQCVDALSRQR*GYQVAQKQPFL
Trigger: CAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572365.1
CDS CAA 72 bp AGCGAGATTGGTAAGAATAGCTCAACCATGAGCGGCTaGACATGGCCAATACTGCCTCCTGGCCTTGCATTC +
Preference number: 6 (lower is better)
Translates to: SEIGKNSSTMSG*TWPILPPGLAF
Trigger: GAATGCAAGGCCAGGAGGCAGTATTGGCCATGTCAAGCCGCTCATGGTTGAGCTATTCTTACCAATCTCGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000568539.1
CDS CAA 90 bp GCATCAAACTCATCTTCAATGTGTCGACGCACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTGACACCTCA +
Preference number: 6 (lower is better)
Translates to: ASNSSSMCRRTVQTA*GLPGSSETAISDTS
Trigger: TGAGGTGTCAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGATGAGTTTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 90 bp AGAAACATGGCTGCAGGAAACCTGAGCCACCCAGACCTCCAGGCCTaGGTTACACCAACAGTACGGAGTCCAAGAAAGCAGATAAATTTG +
Preference number: 6 (lower is better)
Translates to: RNMAAGNLSHPDLQA*VTPTVRSPRKQINL
Trigger: CAAATTTATCTGCTTTCTTGGACTCCGTACTGTTGGTGTAACCAAGGCCTGGAGGTCTGGGTGGCTCAGGTTTCCTGCAGCCATGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564899.1
ENST00000566095.6
CDS CAA 90 bp AAAAGCTGCTTACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCAGAAACAGCCATTTCTGACACCTCA +
Preference number: 6 (lower is better)
Translates to: KSCLPSMCRRTVQTA*GLPGSSETAISDTS
Trigger: TGAGGTGTCAGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTAAGCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572365.1
CDS TCA 72 bp TCCTGGGTGTGTACTGCAGTGGGAAGGCTACTTGATTaGAGACAGCACCGAGCTTCTCTAATGCCAAAATCC +
Preference number: 6 (lower is better)
Translates to: SWVCTAVGRLLD*RQHRASLMPKS
Trigger: GGATTTTGGCATTAGAGAAGCTCGGTGCTGTCTTCAATCAAGTAGCCTTCCCACTGCAGTACACACCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
ENST00000568539.1
CDS GCA 72 bp AGTGTGCATCACCAAGTACCAGCCAAGGTTAGTATTTaGCTGGAAGACTGCTGCATGTGCAGGCAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: SVHHQVPAKVSI*LEDCCMCRQKE
Trigger: TTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTGGTGATGCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CCA 72 bp CCTTCAAAACTTAAGCCACCACCAACTCCAACATACTaGCGTCCGCCATTAGACCTCAAGACAGGGACATTC +
Preference number: 6 (lower is better)
Translates to: PSKLKPPPTPTY*RPPLDLKTGTF
Trigger: GAATGTCCCTGTCTTGAGGTCTAATGGCGGACGCCAGTATGTTGGAGTTGGTGGTGGCTTAAGTTTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566095.6
CDS CAA 72 bp TGTTTCTCAATGGCACTAATCATAACGGCTCGCCCTTaGGGATCCACAGCTAAGAACTGGCCAGGAACGATG +
Preference number: 6 (lower is better)
Translates to: CFSMALIITARP*GSTAKNWPGTM
Trigger: CATCGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGGCGAGCCGTTATGATTAGTGCCATTGAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 72 bp TCATCTTCAATGTGTCGACGCACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCAGAAACAGCCATTTCT +
Preference number: 6 (lower is better)
Translates to: SSSMCRRTVQTA*GLPGSSETAIS
Trigger: AGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 72 bp TTACCTTCAATGTGTCGACGCACTGTCCAGACAGCGTaGGGGTTACCAGGTAGCTCAGAAACAGCCATTTCT +
Preference number: 6 (lower is better)
Translates to: LPSMCRRTVQTA*GLPGSSETAIS
Trigger: AGAAATGGCTGTTTCTGAGCTACCTGGTAACCCCAACGCTGTCTGGACAGTGCGTCGACACATTGAAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572365.1
CDS CAA 90 bp ACTTCGGGTGGGGTTCGGTCCAGTTCTTCAGAGACGTTCTTTTGTTaGTTGGGTTCCATGGAATTGAACTGCTCACAGAGGTCTCCATCA +
Preference number: 6 (lower is better)
Translates to: TSGGVRSSSSETFFC*LGSMELNCSQRSPS
Trigger: TGATGGAGACCTCTGTGAGCAGTTCAATTCCATGGAACCCAACAAACAAAAGAACGTCTCTGAAGAACTGGACCGAACCCCACCCGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS TCA 72 bp GTTTTCAGAGCAGATCAGTACTCCACTTGGACCATCTaGCCCTCCTGGAACTGTAATAAGGAAGTTGCCGTG +
Preference number: 6 (lower is better)
Translates to: VFRADQYSTWTI*PSWNCNKEVAV
Trigger: CACGGCAACTTCCTTATTACAGTTCCAGGAGGGTCAGATGGTCCAAGTGGAGTACTGATCTGCTCTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 72 bp CCGATGCAAATTCCAGTGTCTCGTAAGACAGTGGGGTaGGATGGAAGCGAGATTGGTAAGAATAGCTCAACC +
Preference number: 6 (lower is better)
Translates to: PMQIPVSRKTVG*DGSEIGKNSST
Trigger: GGTTGAGCTATTCTTACCAATCTCGCTTCCATCTCACCCCACTGTCTTACGAGACACTGGAATTTGCATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS CCA 72 bp TGCATCACCAAGTACCAGCCAAGGTTAGTATTTGCCTaGAAGACTGCTGCATGTGCAGGCAGAAGGAATGTT +
Preference number: 6 (lower is better)
Translates to: CITKYQPRLVFA*KTAACAGRRNV
Trigger: AACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTGGTGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CAA 72 bp GGGGTTCGGTCCAGTTCTTCAGAGACGTTCTTTTGTTaGTTGGGTTCCATGGAATTGAACTGCTCACAGAGG +
Preference number: 6 (lower is better)
Translates to: GVRSSSSETFFC*LGSMELNCSQR
Trigger: CCTCTGTGAGCAGTTCAATTCCATGGAACCCAACAAACAAAAGAACGTCTCTGAAGAACTGGACCGAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CAA 72 bp GGGTGGGGTTCGGTCCAGTTCTTCAGAGACGTTCTTTaGTTTGTTGGGTTCCATGGAATTGAACTGCTCACA +
Preference number: 6 (lower is better)
Translates to: GWGSVQFFRDVL*FVGFHGIELLT
Trigger: TGTGAGCAGTTCAATTCCATGGAACCCAACAAACAAAAGAACGTCTCTGAAGAACTGGACCGAACCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS TCA 72 bp AATTTCCTGGGTGTGTACTGCAGTGGGAAGGCTACTTaGTTGAAGACAGCACCGAGCTTCTCTAATGCCAAA +
Preference number: 6 (lower is better)
Translates to: NFLGVYCSGKAT*LKTAPSFSNAK
Trigger: TTTGGCATTAGAGAAGCTCGGTGCTGTCTTCAATCAAGTAGCCTTCCCACTGCAGTACACACCCAGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302516.10
ENST00000562722.1
ENST00000563739.5
ENST00000568539.1
CDS GCA 72 bp AGAACTGGCCAGGAACGATGCGACGGCATCCACTCTTaGCAAAGGTTTCTTGGTGAATCTTCTCAAACATAT +
Preference number: 6 (lower is better)
Translates to: RTGQERCDGIHS*QRFLGESSQTY
Trigger: ATATGTTTGAGAAGATTCACCAAGAAACCTTTGGCAAGAGTGGATGCCGTCGCATCGTTCCTGGCCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000567654.1
CDS GCA 72 bp GTACCAGCCAAGGTTAGTATTTGCCTGGAAGACTGCTaGATGTGCAGGCAGAAGGAATGTTCACTCAATAGT +
Preference number: 6 (lower is better)
Translates to: VPAKVSICLEDC*MCRQKECSLNS
Trigger: ACTATTGAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS GCA 72 bp CAAGTACCAGCCAAGGTTAGTATTTGCCTGGAAGACTaGTGCATGTGCAGGCAGAAGGAATGTTCACTCAAT +
Preference number: 6 (lower is better)
Translates to: QVPAKVSICLED*CMCRQKECSLN
Trigger: ATTGAGTGAACATTCCTTCTGCCTGCACATGCAGCAGTCTTCCAGGCAAATACTAACCTTGGCTGGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CAA 72 bp CTACCACAGGCCACATACAACTGTGGAGTATCTTCATaGGCCAGATCAGCTATCTGGCAAAACAGAATGGGA +
Preference number: 6 (lower is better)
Translates to: LPQATYNCGVSS*ARSAIWQNRMG
Trigger: TCCCATTCTGTTTTGCCAGATAGCTGATCTGGCCAATGAAGATACTCCACAGTTGTATGTGGCCTGTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000567635.5
ENST00000572365.1
CDS TCA 72 bp ACCGTTCTAATCAAAAGGAGAGGAGCAGGTGAAGCCTaGTGGAAGCTTATCAGCTATGATGGGAAAACCTCT +
Preference number: 6 (lower is better)
Translates to: TVLIKRRGAGEA*WKLISYDGKTS
Trigger: AGAGGTTTTCCCATCATAGCTGATAAGCTTCCATCAGGCTTCACCTGCTCCTCTCCTTTTGATTAGAACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568539.1
CDS GCA 72 bp CTCATAGAAAGTAAGTGTCTGCTGGGTATTAGCTGCTaGTTCCCCTGTTGGATCATTGTCTGCTTCCTCATA +
Preference number: 6 (lower is better)
Translates to: LIESKCLLGISC*FPCWIIVCFLI
Trigger: TATGAGGAAGCAGACAATGATCCAACAGGGGAAGCAGCAGCTAATACCCAGCAGACACTTACTTTCTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp GTCATTCCGCCTCCTGGGAATTGGACAGCGGATATCTaGCTGGTCACCAAAGTTCTTGTAAGTAATATAGTT +
Preference number: 6 (lower is better)
Translates to: VIPPPGNWTADI*LVTKVLVSNIV
Trigger: AACTATATTACTTACAAGAACTTTGGTGACCAGCCAGATATCCGCTGTCCAATTCCCAGGAGGCGGAATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CCA 72 bp AAAACCCGATGCAAATTCCAGTGTCTCGTAAGACAGTaGGGTGAGATGGAAGCGAGATTGGTAAGAATAGCT +
Preference number: 6 (lower is better)
Translates to: KTRCKFQCLVRQ*GEMEARLVRIA
Trigger: AGCTATTCTTACCAATCTCGCTTCCATCTCACCCCACTGTCTTACGAGACACTGGAATTTGCATCGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000563739.5
ENST00000568539.1
CDS TCA 72 bp GTTTGGTTCCAGAAAAGTTTCCATGAATGGCAAAGCTaGTGCCAGTGGCTCTCTGCAAGGTTAAGTTGTACA +
Preference number: 6 (lower is better)
Translates to: VWFQKSFHEWQS*CQWLSARLSCT
Trigger: TGTACAACTTAACCTTGCAGAGAGCCACTGGCATCAGCTTTGCCATTCATGGAAACTTTTCTGGAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302516.10
ENST00000566095.6
ENST00000577085.1
CDS TCA 72 bp TGGACAACACTAGGGTGGCATTCACGAAAGACACAATaGTGTAGGCATCAAACTCATCTTCAATGTGTCGAC +
Preference number: 6 (lower is better)
Translates to: WTTLGWHSRKTQ*CRHQTHLQCVD
Trigger: GTCGACACATTGAAGATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGAATGCCACCCTAGTGTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 90 bp AAGCTGGTTTTCATTACGCTTGTAGCGAACCCAGATGAAACTTTCTaGGACATCAGATACAATTACCCTATGTCCGATAGTCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: KLVFITLVANPDETF*DIRYNYPMSDSLDP
Trigger: GGGATCCAGACTATCGGACATAGGGTAATTGTATCTGATGTCCAAGAAAGTTTCATCTGGGTTCGCTACAAGCGTAATGAAAACCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS TCA 72 bp CAGAGACGTTCTTTTGTTTGTTGGGTTCCATGGAATTaGACTGCTCACAGAGGTCTCCATCAATCACATTCT +
Preference number: 6 (lower is better)
Translates to: QRRSFVCWVPWN*TAHRGLHQSHS
Trigger: AGAATGTGATTGATGGAGACCTCTGTGAGCAGTTCAATTCCATGGAACCCAACAAACAAAAGAACGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS TCA 72 bp TCACTCAATAGTAACTTCGGGTATCTGGAAAGTGAGTaGACCAACAGAACCCGACCTGTATTTATAGGTGAC +
Preference number: 6 (lower is better)
Translates to: SLNSNFGYLESE*TNRTRPVFIGD
Trigger: GTCACCTATAAATACAGGTCGGGTTCTGTTGGTTCACTCACTTTCCAGATACCCGAAGTTACTATTGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CCA 72 bp AGAAGGAATGTTCACTCAATAGTAACTTCGGGTATCTaGAAAGTGAGTGAACCAACAGAACCCGACCTGTAT +
Preference number: 6 (lower is better)
Translates to: RRNVHSIVTSGI*KVSEPTEPDLY
Trigger: ATACAGGTCGGGTTCTGTTGGTTCACTCACTTTCCAGATACCCGAAGTTACTATTGAGTGAACATTCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567250.5
CDS CAA 72 bp TCAGAGACGTTCTTTTGTTTGTTGGGTTCCATGGAATaGAACTGCTCACAGAGGTCTCCATCAATCACATTC +
Preference number: 6 (lower is better)
Translates to: SETFFCLLGSME*NCSQRSPSITF
Trigger: GAATGTGATTGATGGAGACCTCTGTGAGCAGTTCAATTCCATGGAACCCAACAAACAAAAGAACGTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302516.10
ENST00000565990.2
CDS CAA 72 bp TTCATTACGCTTGTAGCGAACCCAGATGAAACTTTCTaGGACATCAGATACAATTACCCTATGTCCGATAGT +
Preference number: 6 (lower is better)
Translates to: FITLVANPDETF*DIRYNYPMSDS
Trigger: ACTATCGGACATAGGGTAATTGTATCTGATGTCCAAGAAAGTTTCATCTGGGTTCGCTACAAGCGTAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 72 bp TGGAAGCTTATCAGCTATGATGGGAAAACCTCTCCCTaGGGTACTTCACATAAGAAATTAGAGCAGATAGAA +
Preference number: 6 (lower is better)
Translates to: WKLISYDGKTSP*GTSHKKLEQIE
Trigger: TTCTATCTGCTCTAATTTCTTATGTGAAGTACCCAAGGGAGAGGTTTTCCCATCATAGCTGATAAGCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568539.1
CDS CAA 90 bp TTCATCTGTCTCCAAAGTGATCTTAAAGATATCTCCCTGCTCAGTTaGAGCCAAAAAGAAGAACATCGATTTGGTTTTATGGGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: FICLQSDLKDISLLS*SQKEEHRFGFMGCR
Trigger: TCTGCAACCCATAAAACCAAATCGATGTTCTTCTTTTTGGCTCAAACTGAGCAGGGAGATATCTTTAAGATCACTTTGGAGACAGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 90 bp GATCATTGTCTGCTTCCTCATAATCCATTTCCAGACAAGCAAACATaGGATTTTCAAATCCGACATCTACTCCAACTACATGATACACTA +
Preference number: 6 (lower is better)
Translates to: DHCLLPHNPFPDKQT*DFQIRHLLQLHDTL
Trigger: TAGTGTATCATGTAGTTGGAGTAGATGTCGGATTTGAAAATCCAATGTTTGCTTGTCTGGAAATGGATTATGAGGAAGCAGACAATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302516.10
CDS CAA 72 bp CTCCAAAGTGATCTTAAAGATATCTCCCTGCTCAGTTaGAGCCAAAAAGAAGAACATCGATTTGGTTTTATG +
Preference number: 6 (lower is better)
Translates to: LQSDLKDISLLS*SQKEEHRFGFM
Trigger: CATAAAACCAAATCGATGTTCTTCTTTTTGGCTCAAACTGAGCAGGGAGATATCTTTAAGATCACTTTGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302516.10