RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SF3B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000087365

Ensembl transcript IDs: ENST00000322535.11, ENST00000524475.1, ENST00000524627.5, ENST00000525207.1, ENST00000528302.5, ENST00000529577.5, ENST00000529994.1, ENST00000530322.5, ENST00000530981.1, ENST00000531041.1, ENST00000531589.5, ENST00000533421.2, ENST00000533595.5, ENST00000534307.1, ENST00000534765.1

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTaGAACACAGATTTCAGCCTGGGGTTGGCGTCACCACCAGTCAAA +
Preference number: 1 (lower is better)
Translates to: PRGTSPKPSYKAGQW*NTDFSLGLASPPVK
Trigger: TTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 90 bp AGCCTTCCTACAAAGCAGGGCAGTGGTGAAACACAGATTTCAGCCTaGGGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGT +
Preference number: 1 (lower is better)
Translates to: SLPTKQGSGETQISA*GWRHHQSNAPSNPS
Trigger: ACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 90 bp CCTACAAAGCAGGGCAGTGGTGAAACACAGATTTCAGCCTGGGGTTaGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGT +
Preference number: 1 (lower is better)
Translates to: PTKQGSGETQISAWG*RHHQSNAPSNPSLC
Trigger: ACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 90 bp TCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTaGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAG +
Preference number: 1 (lower is better)
Translates to: SQAHCYFLCRARALI*LFLLPKDKVVRSNQ
Trigger: CTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 90 bp TTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTaGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCA +
Preference number: 1 (lower is better)
Translates to: LAFELCCRTGKDLNF*SQGQLGRPALAYFP
Trigger: TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR GCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCACACTGTTACTTCCTCTaGCGCGCTAGGGCGCTAATC +
Preference number: 2 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPHCYFL*RARALI
Trigger: GATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTACACAGATTTCAGCCTaGGGTTGGCGTCACCACCAG +
Preference number: 2 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSTQISA*GWRHHQ
Trigger: CTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGT...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR TCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCAAAGCAGGGCAGTGGTaGAACACAGATTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAKAGQW*NTDFSL
Trigger: CAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTT...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGGAACTGCGGGAGAGGTaGTTCTTGTGTGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGELRER*FLCEAQ
Trigger: CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTC...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCATTTCAGCCTGGGGTTaGCGTCACCACCAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAISAWG*RHHQSN
Trigger: ATTTGACTGGTGGTGACGCCAACCCCAGGCTGAAAT...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGGAAATGACAAGTCCTTaGGAACTGCGGGAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGEMTSP*ELRERW
Trigger: CCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGAAATGACAAGTCCTTaGGAACTGCGGGAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVIEMTSP*ELRERW
Trigger: CCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CAA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTaGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QDNLAFELCCRTGKD*NFWSQGQLGRPALA
Trigger: GGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTATATGTTCGTGGTTACTaGGGCAGCCCAGTGATTGTA +
Preference number: 2 (lower is better)
Translates to: LCRARALIWLFLLPKDKVYVRGY*GSPVIV
Trigger: TACAATCACTGGGCTGCCCCAGTAACCACGAACATA...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACGAACTGCGGGAGAGGTaGTTCTTGTGTGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDELRER*FLCEAQ
Trigger: CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTC...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR TCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACAAAGCAGGGCAGTGGTaGAACACAGATTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDKAGQW*NTDFSL
Trigger: CAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTT...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR TCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGAATAAGAACATGAAATaGCAAGTCCTTGGGAACTGC +
Preference number: 2 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKNKNMK*QVLGNC
Trigger: GCAGTTCCCAAGGACTTGTCATTTCATGTTCTTATT...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR TCA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGAATAAGAACATGAAATaGCAAGTCCTTGGGAACTGC +
Preference number: 2 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWNKNMK*QVLGNC
Trigger: GCAGTTCCCAAGGACTTGTCATTTCATGTTCTTATT...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 72 bp CAGGGCAGTGGTGAAACACAGATTTCAGCCTGGGGTTaGCGTCACCACCAGTCAAATGCGCCGTCTAATCCC +
Preference number: 3 (lower is better)
Translates to: QGSGETQISAWG*RHHQSNAPSNP
Trigger: GGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGTTTCACCACTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR TCA 72 bp ACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTaGAACACAGATTTCAGCCTGGGGTTGGCGTCACCA +
Preference number: 3 (lower is better)
Translates to: TSPKPSYKAGQW*NTDFSLGLASP
Trigger: TGGTGACGCCAACCCCAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR GCA 72 bp CCCTGGCCTACTTCCCAAGCCCACTGTTACTTCCTCTaGCGCGCTAGGGCGCTAATCTGGCTATTTTTACTC +
Preference number: 3 (lower is better)
Translates to: PWPTSQAHCYFL*RARALIWLFLL
Trigger: GAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGTAGGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 72 bp GAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTaGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: ELCCRTGKDLNF*SQGQLGRPALA
Trigger: GGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR-3UTR CAA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGATTTCAGCCTGGGGTaGGCGTCACCACCAGTCAAA +
Preference number: 3 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALDFSLG*ASPPVK
Trigger: TTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATC...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CCA 72 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTaGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGG +
Preference number: 3 (lower is better)
Translates to: HCYFLCRARALI*LFLLPKDKVVR
Trigger: CCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGGCGCCATAGTGGCCTaGAGGTGGCGGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPGAIVA*RWRRRQ
Trigger: CTGCCGCCGCCGCCACCTCCAGGCCACTATGGCGCC...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAGCCACGGGACCGGGTTaGGTCTTTCTCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLATGPG*VFLPVP
Trigger: GGGGACCGGGAGAAAGACTCAACCCGGTCCCGTGGC...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAGCCAAGGCCAAGGCCTaGTGGAGGTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAAKAKA*WRWWGW
Trigger: CCACCCCCACCACCTCCACCAGGCCTTGGCCTTGGC...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAAATGCCGCCTGCTGCTaGGCCAACTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPNAACC*ANFSRS
Trigger: GGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATT...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCACGGGACCGGGTTaGGTCTTTCTCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALATGPG*VFLPVP
Trigger: GGGGACCGGGAGAAAGACTCAACCCGGTCCCGTGGC...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCAGGCGGCGGCGGCAGCTaGAATTCTGCTTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPGGGGS*NSALGG
Trigger: GCCTCCCAAAGCAGAATTGCAGCTGCCGCCGCCGCC...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCCAAGGCCAAGGCCTaGTGGAGGTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQAKAKA*WRWWGW
Trigger: CCACCCCCACCACCTCCACCAGGCCTTGGCCTTGGC...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCAAGGAGTGGGGCCCACTaGGCCCACTGGAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPRSGAH*AHWSSY
Trigger: GTAGCTGCTCCAGTGGGCCCAGTGGGCCCCACTCCT...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCATTGGGAGGCTCGGGATaGTCCGTCGCCATCTTAGCC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPLGGSG*SVAILA
Trigger: GGCTAAGATGGCGACGGAGCATCCCGAGCCTCCCAA...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGCGGCGGCGGCAGCTaGAATTCTGCTTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSGGGGS*NSALGG
Trigger: GCCTCCCAAAGCAGAATTGCAGCTGCCGCCGCCGCC...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCGCCGATTCAGCACGATaGCAGTCTGGCGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASADSAR*QSGGCS
Trigger: GCTACACCCGCCAGACTGGCATCGTGCTGAATCGGC...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAGAGGACCCAGAGGAGTaGGCACACCAATCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLEDPEE*AHQSGP
Trigger: TGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTC...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAGGTCACAAGGTCAGTTaGGAAGGCCTGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLGHKVS*EGLPWP
Trigger: AGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACC...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTACGAGTGGCCTTGAGGTaGACCAAGAGCTTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLRVALR*TKSLGS
Trigger: GGACCCTAAGCTCTTGGTTCACCTCAAGGCCACTCG...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCTCCTCCTTCTCTACTTaGGCCTGCTGCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASSSFST*ACCSRT
Trigger: TGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGA...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAGGTGGTTCTTGTGTaGAGCCCAGGCATCCAGACG +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPEVVLV*SPGIQT
Trigger: CGTCTGGATGCCTGGGCTTCACACAAGAACCACCTC...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCGCACGCTCCTCCTGCTaGATCAGCAATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPARSSC*ISNAAC
Trigger: GCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGC...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAGAGGACCCAGAGGAGTaGGCACACCAATCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAEDPEE*AHQSGP
Trigger: TGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTC...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp TTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGGGCGCCATAGTGGCCTaGAGGTGGCGGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: FELCCRTGKDLNFWSQGQGAIVA*RWRRRQ
Trigger: CTGCCGCCGCCGCCACCTCCAGGCCACTATGGCGCC...CTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGCCCACTGGGCCCACTaGAGCAGCTACTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVIAHWAH*SSYSRT
Trigger: GGTCCTCGAGTAGCTGCTCCAGTGGGCCCAGTGGGC...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTAGGAGTGGGGCCCACTaGGCCCACTGGAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGRSGAH*AHWSSY
Trigger: GTAGCTGCTCCAGTGGGCCCAGTGGGCCCCACTCCT...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCGTCTCTGACGCTGACTaGCCCAGGGACGAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPVSDAD*PRDERA
Trigger: TGCTCGCTCGTCCCTGGGCCAGTCAGCGTCAGAGAC...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGGTCTCTGACGCTGACTaGCCCAGGGACGAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWVSDAD*PRDERA
Trigger: TGCTCGCTCGTCCCTGGGCCAGTCAGCGTCAGAGAC...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCACATGGCAATCAGCCATaGGGGAGGGACCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAHGNQP*GRDLVG
Trigger: GCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATG...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGGGATACGATGGGGGTaGTCCATATCGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPGIRWG*SISLHG
Trigger: GCCATGCAGCGATATGGACCACCCCCATCGTATCCC...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAGGGATACGATGGGGGTaGTCCATATCGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRGIRWG*SISLHG
Trigger: GCCATGCAGCGATATGGACCACCCCCATCGTATCCC...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCGGGATACGATGGGGGTaGTCCATATCGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASGIRWG*SISLHG
Trigger: GCCATGCAGCGATATGGACCACCCCCATCGTATCCC...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAACAGCTCTCAGGGATaGGCGAGTTCAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASNSSQG*ASSAQG
Trigger: TCCCTGGGCTGAACTCGCCCATCCCTGAGAGCTGTT...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAAACAGCTCTCAGGGATaGGCGAGTTCAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPNSSQG*ASSAQG
Trigger: TCCCTGGGCTGAACTCGCCCATCCCTGAGAGCTGTT...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAGGGTTGATCCCATCATaGCCCCTCCAACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRGLIPS*PLQQWL
Trigger: CAGCCACTGTTGGAGGGGCCATGATGGGATCAACCC...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGTTGGGAGGCTCGGGATaGTCCGTCGCCATCTTAGCC +
Preference number: 4 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALLGGSG*SVAILA
Trigger: GGCTAAGATGGCGACGGAGCATCCCGAGCCTCCCAA...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGCACGCTCCTCCTGCTaGATCAGCAATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVARSSC*ISNAAC
Trigger: GCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGC...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCATCCTGCTGTCGTTCCTaGTCCAGTAACACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPSCCRS*SSNTAA
Trigger: GGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGA...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATCCTGCTGTCGTTCCTaGTCCAGTAACACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLSCCRS*SSNTAA
Trigger: GGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGA...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATGCGCTGTCACATCGTaGATCTCCACGACATCGGGC +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQACAVTS*ISTTSG
Trigger: GCCCGATGTCGTGGAGATGCACGATGTGACAGCGCA...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCTGTTCTTCCTTCTCCTaGAGGGCCTCTCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASCSSFS*RASRIS
Trigger: GGAGATGCGAGAGGCCCTGCAGGAGAAGGAAGAACA...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAGGTGGTCCATATCGCTaGATGGCAATCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRGGPYR*MAISHG
Trigger: CCCATGGCTGATTGCCATGCAGCGATATGGACCACC...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCACATCCACTGGAGGTTTaGCCCAGCCACCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAHPLEV*PSHQHG
Trigger: ACCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATG...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATGCTGCTCCCGCACATaGTCCTCATACTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLCCSRT*SSYFWV
Trigger: GACCCAGAAGTATGAGGAGCATGTGCGGGAGCAGCA...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCCCTTATATTTCTTGCTaGCCCCACGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASPYISC*PHGCPG
Trigger: CCCAGGACAGCCGTGGGGGCAGCAAGAAATATAAGG...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGACCTTATATTTCTTGCTaGCCCCACGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRPYISC*PHGCPG
Trigger: CCCAGGACAGCCGTGGGGGCAGCAAGAAATATAAGG...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTTGCCGACATGGGAGGTaGAGCGGCTTTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSCRHGR*SGFVPI
Trigger: GATGGGGACAAAGCCGCTCCACCTCCCATGTCGGCA...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTGCCCACTGGGCCCACTaGAGCAGCTACTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPAHWAH*SSYSRT
Trigger: GGTCCTCGAGTAGCTGCTCCAGTGGGCCCAGTGGGC...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGGGGGAGGGACCTTGTaGGCATTTGGTCCTACTGGC +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQGGGTL*AFGPTG
Trigger: GCCAGTAGGACCAAATGCCCACAAGGTCCCTCCCCC...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAGTCCATATCGCTGCATaGCAATCAGCCATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRVHIAA*QSAMGE
Trigger: CTCCCCCATGGCTGATTGCCATGCAGCGATATGGAC...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCCAGGTTGGGATACGATaGGGGTGGTCCATATCGCTG +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASQVGIR*GWSISL
Trigger: CAGCGATATGGACCACCCCCATCGTATCCCAACCTG...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCCCCAGCCACCAGCATaGTACCCAAAGGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAPQPPA*YPKEQL
Trigger: GAGCTGTTCCTTTGGGTACCATGCTGGTGGCTGGGG...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCACCCCAGCCACCAGCATaGTACCCAAAGGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAPQPPA*YPKEQL
Trigger: GAGCTGTTCCTTTGGGTACCATGCTGGTGGCTGGGG...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTCCCAGTCTCATCCACTaGAGGTTTGCCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSPSLIH*RFAPAT
Trigger: GGTGGCTGGGGCAAACCTCCAGTGGATGAGACTGGG...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCGGGTTGATCCCATCATaGCCCCTCCAACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAGLIPS*PLQQWL
Trigger: CAGCCACTGTTGGAGGGGCCATGATGGGATCAACCC...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAACTGCGGGAGAGGTaGTTCTTGTGTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPELRER*FLCEAQ
Trigger: CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTC...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAACACAGATTTCAGCCTaGGGTTGGCGTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLTQISA*GWRHHQ
Trigger: CTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGT...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGACACAGCTGCCTGCTTaGCACGCTCCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWTQLPA*HAPPAA
Trigger: TGCAGCAGGAGGAGCGTGCCAAGCAGGCAGCTGTGT...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS-3UTR TCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGATGTTCCTTCAGCGAATaGTCTCCCTGCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRCSFSE*SPCCLA
Trigger: TGCCAAGCAGCAGGGAGATCATTCGCTGAAGGAACA...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322535.11
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAAACACAGTGAAGAGCTaGGGTGTCTCACTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPNTVKS*GVSLPS
Trigger: GGACGGAAGTGAGACACCTCAGCTCTTCACTGTGTT...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCATCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPSLATQ*RAEVSH
Trigger: GTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGA...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCTCCTCCTTCTCTACTTaGGCCTGCTGCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPSSFST*ACCSRT
Trigger: TGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGA...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAAACACAGTGAAGAGCTaGGGTGTCTCACCGTCCATC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPNTVKS*GVSPSI
Trigger: GATGGACGGTGAGACACCTCAGCTCTTCACTGTGTT...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530981.1
CDS-3UTR GCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGCCGATTCAGCACGATaGCAGTCTGGCGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVIADSAR*QSGGCS
Trigger: GCTACACCCGCCAGACTGGCATCGTGCTGAATCGGC...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAATTCCAGGGAGCTGTaGCGACATGGGAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPNSREL*RHGRWS
Trigger: GCTCCACCTCCCATGTCGGCACAGCTCCCTGGAATT...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGAATTCCAGGGAGCTGTaGCGACATGGGAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWNSREL*RHGRWS
Trigger: GCTCCACCTCCCATGTCGGCACAGCTCCCTGGAATT...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTTTGGCACGCTCCTCCTaGTGCATCAGCAATGCCGCC +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVILARSS*CISNAA
Trigger: GGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAA...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCGCTGCCCGCTTCTGCTaGTCCAAGAGCTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPAARFC*SKSSCS
Trigger: GGAACATGAGCTCTTGGAGCAGCAGAAGCGGGCAGC...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322535.11
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAACAGCTGCCCGCTTCTaGTGCTCCAAGAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQATAARF*CSKSSC
Trigger: ACATGAGCTCTTGGAGCAGCAGAAGCGGGCAGCTGT...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322535.11
CDS-3UTR GCA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGTGCGCTGTCACATCGTaGATCTCCACGACATCGGGC +
Preference number: 4 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALCAVTS*ISTTSG
Trigger: GCCCGATGTCGTGGAGATGCACGATGTGACAGCGCA...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCTTCTGTTTGGCAGCGTaGTCAGCCACCATGTCACTG +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASFCLAA*SATMSL
Trigger: CAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAA...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCACCTTATATTTCTTGCTaGCCCCACGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAPYISC*PHGCPG
Trigger: CCCAGGACAGCCGTGGGGGCAGCAAGAAATATAAGG...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCACACTGTTACTTCCTCTaGCGCGCTAGGGCGCTAATC +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAHCYFL*RARALI
Trigger: GATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTAAGCCTGGGGGATCTTaGGGCCCACAGAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGKPGGS*GPQRGH
Trigger: ATGACCCCTCTGTGGGCCCCAAGATCCCCCAGGCTT...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGAACAGCTCTCAGGGATaGGCGAGTTCAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQNSSQG*ASSAQG
Trigger: TCCCTGGGCTGAACTCGCCCATCCCTGAGAGCTGTT...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCCCCCAGCCACCAGCATaGTACCCAAAGGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPPQPPA*YPKEQL
Trigger: GAGCTGTTCCTTTGGGTACCATGCTGGTGGCTGGGG...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATGGCCCCTCCAACAGTaGCTGTTCTCTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAWPLQQ*LFSSLA
Trigger: TGCCAGAGAAGAGAACAGCCACTGTTGGAGGGGCCA...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGGTTGATCCCATCATaGCCCCTCCAACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSGLIPS*PLQQWL
Trigger: CAGCCACTGTTGGAGGGGCCATGATGGGATCAACCC...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTGAAACACAGATTCGAGTGGCCTTGAGGTaGACCAAGAGCTTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EVLPPSLPTKQGSGETQIRVALR*TKSLGS
Trigger: GGACCCTAAGCTCTTGGTTCACCTCAAGGCCACTCG...AATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTCCTCCTTCTCTACTTaGGCCTGCTGCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGSSFST*ACCSRT
Trigger: TGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGA...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGCACAGGTAAGGACTTaGACTTCTGGTCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPAQVRT*TSGHKV
Trigger: GACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGC...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTCTGCTGCATCAGCAATaGCGCCTGCTGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVILLHQQ*RLLLSQ
Trigger: TTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAG...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTACTGCTGCATCAGCAATaGCGCCTGCTGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVLLHQQ*RLLLSQ
Trigger: TTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAG...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAAAGAGCTTAGGGTCCTaGGCTGTCACATCGTGCATC +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAKSLGS*AVTSCI
Trigger: GATGCACGATGTGACAGCGCAGGACCCTAAGCTCTT...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGTGTTCTTCCTTCTCCTaGAGGGCCTCTCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALCSSFS*RASRIS
Trigger: GGAGATGCGAGAGGCCCTGCAGGAGAAGGAAGAACA...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTCATCCACTGGAGGTTTaGCCCAGCCACCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGHPLEV*PSHQHG
Trigger: ACCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATG...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTGAAACACAGATTGCTGCAATTCTGCTTTaGGAGGCTCGGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: EVLPPSLPTKQGSGETQIAAILL*EARDAP
Trigger: CGGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGC...AATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGCTGCAATTCTGCTTTaGGAGGCTCGGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVAAILL*EARDAP
Trigger: CGGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGC...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTCGATCTCTGCCAACTTaGCCTGAAGCTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGRSLPT*PEAPGQ
Trigger: CTGCCCAGGAGCTTCAGGCCAAGTTGGCAGAGATCG...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCCCAAATTTGGTGGGTaGGCCATAGGAAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAPKFGG*AIGKPR
Trigger: CCTTGGCTTTCCTATGGCCCACCCACCAAATTTGGG...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGGGCCCCAAATTTGGTaGGTGGGCCATAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVGPQIW*VGHRKA
Trigger: GGCTTTCCTATGGCCCACCCACCAAATTTGGGGCCC...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTCTCAACATCAGCTGCTaGGGAATCAGAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSLNISC*GIRATG
Trigger: TCCCGTGGCTCTGATTCCCCAGCAGCTGATGTTGAG...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGCTCAACATCAGCTGCTaGGGAATCAGAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWLNISC*GIRATG
Trigger: TCCCGTGGCTCTGATTCCCCAGCAGCTGATGTTGAG...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCCAAATCCCTTCTTCTTaGGGGCTGCAGAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASQIPSS*GLQSSP
Trigger: TGGAGAACTCTGCAGCCCCCAAGAAGAAGGGATTTG...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGAAAACACCAGTGGCGTaGCACAGGCACAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALKTPVA*HRHRVP
Trigger: CGGAACTCTGTGCCTGTGCCACGCCACTGGTGTTTT...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCCGCTTAAAACACCAGTaGCGTGGCACAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPRLKHQ*RGTGTE
Trigger: CTCTGTGCCTGTGCCACGCCACTGGTGTTTTAAGCG...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTCTCGCATCTCCTaGATGCCTGTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALASRIS*MPVRLM
Trigger: CATCAAACGCACAGGCATCCAGGAGATGCGAGAGGC...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGCAGGTTGGGATACGATaGGGGTGGTCCATATCGCTG +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQQVGIR*GWSISL
Trigger: CAGCGATATGGACCACCCCCATCGTATCCCAACCTG...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAGGCTGTTCTCTTCTCTaGCAACACAGTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRGCSLL*QHSEEL
Trigger: CAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCC...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGGAACTGCGGGAGAGGTaGTTCTTGTGTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWELRER*FLCEAQ
Trigger: CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTC...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCGAAATGACAAGTCCTTaGGAACTGCGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAEMTSP*ELRERW
Trigger: CCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTAATGCCGCCTGCTGCTaGGCCAACTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGNAACC*ANFSRS
Trigger: GGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATT...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCTCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPSLATQ*RAEVSH
Trigger: GTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGA...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAAAAGCAGGGCAGTGGTaGAACACAGATTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAKAGQW*NTDFSL
Trigger: CAGGCTGAAATCTGTGTTTCACCACTGCCCTGCTTT...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAATTGGCACGCTCCTCCTaGTGCATCAGCAATGCCGCC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCELARSS*CISNAA
Trigger: GGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAA...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCACTTCTTCTTGGGGGCTaGAGAGTTCTCCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPLLLGG*RVLQFV
Trigger: GACAAACTGGAGAACTCTGCAGCCCCCAAGAAGAAG...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAATGCCCCGTTTGCCCTaGAGGTATTTGCGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLMPRLP*RYLRLK
Trigger: TTTTAAGCGCAAATACCTGCAGGGCAAACGGGGCAT...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTCTCAATGCCCCGTTTaGCCTGCAGGTATTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWSQCPV*PAGICA
Trigger: AGCGCAAATACCTGCAGGGCAAACGGGGCATTGAGA...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAAGCTTTGGCTTGGTCTaGCACTTGAAGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLSFGLV*HLKKAS
Trigger: TGATGCCTTCTTCAAGTGGCAGACCAAGCCAAAGCT...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTCATCCACTGGAGGTTTaGCCCAGCCACCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPHPLEV*PSHQHG
Trigger: ACCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATG...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGTCCTCGCGATTACCCTaGATCGGAGCTCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGSSRLP*IGAPIS
Trigger: AGAGATCGGAGCTCCGATCCAGGGTAATCGCGAGGA...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTCCTCGCGATTACCCTaGATCGGAGCTCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGSSRLP*IGAPIS
Trigger: AGAGATCGGAGCTCCGATCCAGGGTAATCGCGAGGA...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGGGAGCTGTGCCGACATaGGAGGTGGAGCGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKGAVPT*EVERLC
Trigger: ACAAAGCCGCTCCACCTCCCATGTCGGCACAGCTCC...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTGAAACACAGATTAAGGTGGTGGTGGCATaGGAATTCCAGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EVLPPSLPTKQGSGETQIKVVVA*EFQGAV
Trigger: CACAGCTCCCTGGAATTCCCATGCCACCACCACCTT...AATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTAAGGTGGTGGTGGCATaGGAATTCCAGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGKVVVA*EFQGAV
Trigger: CACAGCTCCCTGGAATTCCCATGCCACCACCACCTT...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTGGGCCCCAAATTTGGTaGGTGGGCCATAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPGPQIW*VGHRKA
Trigger: GGCTTTCCTATGGCCCACCCACCAAATTTGGGGCCC...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGGTGCGCACACCAATCTaGCCCATGTCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKVRTPI*PMSCGG
Trigger: GCCCCCACAAGACATGGGCCAGATTGGTGTGCGCAC...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCGAATTCATCTCTTCCTaGCGGCTCTCCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPEFISS*RLSFSC
Trigger: GCAGCTGAAGGAGAGCCGCCAGGAAGAGATGAATTC...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGACCCCTCGCACCCGCTaGGGCTTTTTCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWTPRTR*GFFFFF
Trigger: AAAGAAGAAGAAAAAGCCCCAGCGGGTGCGAGGGGT...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCAAATCCCTTCTTCTTaGGGGCTGCAGAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAQIPSS*GLQSSP
Trigger: TGGAGAACTCTGCAGCCCCCAAGAAGAAGGGATTTG...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTACAGCTTGGGGGCTTCTaGCTTCTTTTCCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVQLGGF*LLFLLV
Trigger: GACGAGCAGGAAAAGAAGCCAGAAGCCCCCAAGCTG...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTCGCTTAAAACACCAGTaGCGTGGCACAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGRLKHQ*RGTGTE
Trigger: CTCTGTGCCTGTGCCACGCCACTGGTGTTTTAAGCG...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGGCCTCTCGCATCTCCTaGATGCCTGTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGASRIS*MPVRLM
Trigger: CATCAAACGCACAGGCATCCAGGAGATGCGAGAGGC...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAATCAGACAGATCTCCTaGCTTCTTCTCCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: TSQAHCYFLCRARALIWLIRQIS*LLLLQS
Trigger: CGACTGAAGGAGAAGAAGCCAGGAGATCTGTCTGAT...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGGGGGGAGGGACCTTGTaGGCATTTGGTCCTACTGGC +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKGGGTL*AFGPTG
Trigger: GCCAGTAGGACCAAATGCCCACAAGGTCCCTCCCCC...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGGTTGGGATACGATaGGGGTGGTCCATATCGCTG +
Preference number: 4 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGQVGIR*GWSISL
Trigger: CAGCGATATGGACCACCCCCATCGTATCCCAACCTG...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCCAGGGATTTTCAGGTTaGGATACGATGGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPQGFSG*DTMGVV
Trigger: GACCACCCCCATCGTATCCCAACCTGAAAATCCCTG...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAACCCAGTCTCATCCACTaGAGGTTTGCCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEPSLIH*RFAPAT
Trigger: GGTGGCTGGGGCAAACCTCCAGTGGATGAGACTGGG...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTATGGCCCCTCCAACAGTaGCTGTTCTCTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVWPLQQ*LFSSLA
Trigger: TGCCAGAGAAGAGAACAGCCACTGTTGGAGGGGCCA...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCCCCAGTTTATGTTCGTaGTTACTGGGGCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPPSLCS*LLGQPS
Trigger: ACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCAATTTCAGCCTGGGGTTaGCGTCACCACCAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPISAWG*RHHQSN
Trigger: ATTTGACTGGTGGTGACGCCAACCCCAGGCTGAAAT...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTAGGTCACAAGGTCAGTTaGGAAGGCCTGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLGHKVS*EGLPWP
Trigger: AGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACC...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCATCCTCAGTCTTGGTCTaGAATTCAGCAGCATTGGTT +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPSSVLV*NSAALV
Trigger: AACCAATGCTGCTGAATTTCAGACCAAGACTGAGGA...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCCAGCCACCATGTCACTaGAGTCCTCCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPQPPCH*SPPSLL
Trigger: AAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTG...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTCAGCCACCATGTCACTaGAGTCCTCCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSQPPCH*SPPSLL
Trigger: AAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTG...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAACGGAGCTCCGATCTCTaGCAACTTGGCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCERSSDL*QLGLKL
Trigger: GAGCTTCAGGCCAAGTTGGCAGAGATCGGAGCTCCG...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCTCATCACTGTCCTTGTaGTCCTCTTCAAATCCCTTC +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASSSLSL*SSSNPF
Trigger: GAAGGGATTTGAAGAGGAGCACAAGGACAGTGATGA...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCAATGCCCCGTTTGCCCTaGAGGTATTTGCGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPMPRLP*RYLRLK
Trigger: TTTTAAGCGCAAATACCTGCAGGGCAAACGGGGCAT...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGTCTCAATGCCCCGTTTaGCCTGCAGGTATTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGSQCPV*PAGICA
Trigger: AGCGCAAATACCTGCAGGGCAAACGGGGCATTGAGA...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp TTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGGGAGCTGTGCCGACATaGGAGGTGGAGCGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: FELCCRTGKDLNFWSQGQGAVPT*EVERLC
Trigger: ACAAAGCCGCTCCACCTCCCATGTCGGCACAGCTCC...CTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTCCCAAATTTGGTGGGTaGGCCATAGGAAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVIPKFGG*AIGKPR
Trigger: CCTTGGCTTTCCTATGGCCCACCCACCAAATTTGGG...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTAAGCCTGGGGGATCTTaGGGCCCACAGAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGKPGGS*GPQRGH
Trigger: ATGACCCCTCTGTGGGCCCCAAGATCCCCCAGGCTT...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTGAAACACAGATTACAGGTCCCCATGGATaGTCAGCTTTGGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EVLPPSLPTKQGSGETQITGPHG*SALAWS
Trigger: AGACCAAGCCAAAGCTGACCATCCATGGGGACCTGT...AATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAATCAGACAGATCTCCTaGCTTCTTCTCCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQAIRQIS*LLLLQS
Trigger: CGACTGAAGGAGAAGAAGCCAGGAGATCTGTCTGAT...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGACCTTGTGGGCATTTaGTCCTACTGGCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVDLVGI*SYWHPQ
Trigger: TTGGGGATGCCAGTAGGACCAAATGCCCACAAGGTC...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTCAGGGATTTTCAGGTTaGGATACGATGGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVIQGFSG*DTMGVV
Trigger: GACCACCCCCATCGTATCCCAACCTGAAAATCCCTG...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCGAAATTCAGCAGCATTaGTTCCAAACACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TSPWELRERWFLCEAQASEIQQH*FQTRPH
Trigger: ATGGGGACGTGTTTGGAACCAATGCTGCTGAATTTC...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGGCTGTTCTCTTCTCTaGCAACACAGTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQGCSLL*QHSEEL
Trigger: CAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCC...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTTGGCCCCTCCAACAGTaGCTGTTCTCTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPWPLQQ*LFSSLA
Trigger: TGCCAGAGAAGAGAACAGCCACTGTTGGAGGGGCCA...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGTGCTCCTCATACTTCTaGGTCATGGCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQCSSYF*VMAIGS
Trigger: GGATCCTATGGCCATGACCCAGAAGTATGAGGAGCA...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGAAATGACAAGTCCTTaGGAACTGCGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVEMTSP*ELRERW
Trigger: CCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCTATGTTCGTGGTTACTaGGGCAGCCCAGTGATTGTA +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPAYVRGY*GSPVIV
Trigger: TACAATCACTGGGCTGCCCCAGTAACCACGAACATA...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCTCCTCAGTCTTGGTCTaGAATTCAGCAGCATTGGTT +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPASSVLV*NSAALV
Trigger: AACCAATGCTGCTGAATTTCAGACCAAGACTGAGGA...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGCACAGGTAAGGACTTaGACTTCTGGTCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LCRARALIWLFLLPKDKVAQVRT*TSGHKV
Trigger: GACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGC...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGGGTGGTCCATATCGCTaGATGGCAATCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKGGPYR*MAISHG
Trigger: CCCATGGCTGATTGCCATGCAGCGATATGGACCACC...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAATGCTGCTCCCGCACATaGTCCTCATACTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCECCSRT*SSYFWV
Trigger: GACCCAGAAGTATGAGGAGCATGTGCGGGAGCAGCA...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTTTCTGTTTGGCAGCGTaGTCAGCCACCATGTCACTG +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPFCLAA*SATMSL
Trigger: CAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAA...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCTGGGGTGCCCATCTTaGCAATCTCCTGCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKLGCPS*QSPAVV
Trigger: AACGACAGCAGGAGATTGCCAAGATGGGCACCCCAG...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGATGGATGGTCAGCTTTaGCTTGGTCTGCCACTTGAA +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQMDGQL*LGLPLE
Trigger: TTCAAGTGGCAGACCAAGCCAAAGCTGACCATCCAT...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCACTTCTTCCTCAGTCTTaGTCTGAAATTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QVLGNCGRGGSCVKPRHPLLPQS*SEIQQH
Trigger: ATGCTGCTGAATTTCAGACCAAGACTGAGGAAGAAG...TGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGTGCTCCTCATACTTCTaGGTCATGGCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGCSSYF*VMAIGS
Trigger: GGATCCTATGGCCATGACCCAGAAGTATGAGGAGCA...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTAGTCATAAATGTGGGTTaGTCCCATCATGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLVINVG*SHHGPS
Trigger: GGAGGGGCCATGATGGGATCAACCCACATTTATGAC...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGTCATAAATGTGGGTTaGTCCCATCATGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEVINVG*SHHGPS
Trigger: GGAGGGGCCATGATGGGATCAACCCACATTTATGAC...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAAGGGGACCTAAAACTTaGACTCCTTATATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SPWELRERWFLCEAQASRRGPKT*TPYISC
Trigger: GCAAGAAATATAAGGAGTTCAAGTTTTAGGTCCCCT...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp CTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGAGGTGGTTCTTGTGTaGAGCCCAGGCATCCAGACG +
Preference number: 4 (lower is better)
Translates to: LAIFTPQGQSSKVKPDLEEVVLV*SPGIQT
Trigger: CGTCTGGATGCCTGGGCTTCACACAAGAACCACCTC...CTCTAGGTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCAAGACAATTTAGCTTTTaGGCTATGTTGTCGCACAGG +
Preference number: 4 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPRQFSF*AMLSHR
Trigger: CCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCT...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTCTTCTTCTTGGGGGCTaGAGAGTTCTCCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPLLLGG*RVLQFV
Trigger: GACAAACTGGAGAACTCTGCAGCCCCCAAGAAGAAG...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTAAAGAGCTTAGGGTCCTaGGCTGTCACATCGTGCATC +
Preference number: 4 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLKSLGS*AVTSCI
Trigger: GATGCACGATGTGACAGCGCAGGACCCTAAGCTCTT...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp TTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGCACTGTTACTTCCTCTaGCGCGCTAGGGCGCTAATC +
Preference number: 4 (lower is better)
Translates to: FELCCRTGKDLNFWSQGQHCYFL*RARALI
Trigger: GATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG...CTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACTGCCGACATGGGAGGTaGAGCGGCTTTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDCRHGR*SGFVPI
Trigger: GATGGGGACAAAGCCGCTCCACCTCCCATGTCGGCA...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACCTAGAGCGGGGGCCCCAAATTTaGTGGGTGGGCCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LAIFTPQGQSSKVKPDLERGPQI*WVGHRK
Trigger: TTTCCTATGGCCCACCCACCAAATTTGGGGCCCCCG...CTCTAGGTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTAAAACACCAGTGGCGTaGCACAGGCACAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGKTPVA*HRHRVP
Trigger: CGGAACTCTGTGCCTGTGCCACGCCACTGGTGTTTT...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGACCTTGTGGGCATTTaGTCCTACTGGCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEDLVGI*SYWHPQ
Trigger: TTGGGGATGCCAGTAGGACCAAATGCCCACAAGGTC...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAACAGGGATTTTCAGGTTaGGATACGATGGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEQGFSG*DTMGVV
Trigger: GACCACCCCCATCGTATCCCAACCTGAAAATCCCTG...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTGAACTGCGGGAGAGGTaGTTCTTGTGTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGELRER*FLCEAQ
Trigger: CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTC...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGAAATGACAAGTCCTTaGGAACTGCGGGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEEMTSP*ELRERW
Trigger: CCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTATGTTCGTGGTTACTaGGGCAGCCCAGTGATTGTA +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGYVRGY*GSPVIV
Trigger: TACAATCACTGGGCTGCCCCAGTAACCACGAACATA...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCCCAGTTTATGTTCGTaGTTACTGGGGCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKPSLCS*LLGQPS
Trigger: ACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAATCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCESSSAQ*VQGSPF
Trigger: GAATGGAGACCCCTGAACTCATTGAGCTGAGGAAGA...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTGTCATAAATGTGGGTTaGTCCCATCATGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGVINVG*SHHGPS
Trigger: GGAGGGGCCATGATGGGATCAACCCACATTTATGAC...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAACAGCCACCATGTCACTaGAGTCCTCCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEQPPCH*SPPSLL
Trigger: AAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTG...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR TCA 90 bp CGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCAGGGGACCTAAAACTTaGACTCCTTATATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RTGKDLNFWSQGQLGRPARGPKT*TPYISC
Trigger: GCAAGAAATATAAGGAGTTCAAGTTTTAGGTCCCCT...GGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGGAGGTGGTTCTTGTGTaGAGCCCAGGCATCCAGACG +
Preference number: 4 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWEVVLV*SPGIQT
Trigger: CGTCTGGATGCCTGGGCTTCACACAAGAACCACCTC...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAAATAAGAACATGAAATaGCAAGTCCTTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: MTSPWELRERWFLCEAQANKNMK*QVLGNC
Trigger: GCAGTTCCCAAGGACTTGTCATTTCATGTTCTTATT...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTAGCTTTGGCTTGGTCTaGCACTTGAAGAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPSFGLV*HLKKAS
Trigger: TGATGCCTTCTTCAAGTGGCAGACCAAGCCAAAGCT...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCAGTGCGCACACCAATCTaGCCCATGTCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSVRTPI*PMSCGG
Trigger: GCCCCCACAAGACATGGGCCAGATTGGTGTGCGCAC...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTGAATTCATCTCTTCCTaGCGGCTCTCCTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGEFISS*RLSFSC
Trigger: GCAGCTGAAGGAGAGCCGCCAGGAAGAGATGAATTC...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACCTAGAGCAGCTTGGGGGCTTCTaGCTTCTTTTCCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LAIFTPQGQSSKVKPDLEQLGGF*LLFLLV
Trigger: GACGAGCAGGAAAAGAAGCCAGAAGCCCCCAAGCTG...CTCTAGGTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTATGGATGGTCAGCTTTaGCTTGGTCTGCCACTTGAA +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPMDGQL*LGLPLE
Trigger: TTCAAGTGGCAGACCAAGCCAAAGCTGACCATCCAT...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTATCAGACAGATCTCCTaGCTTCTTCTCCTTCAGTCG +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPIRQIS*LLLLQS
Trigger: CGACTGAAGGAGAAGAAGCCAGGAGATCTGTCTGAT...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACATGGCAATCAGCCATaGGGGAGGGACCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSHGNQP*GRDLVG
Trigger: GCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATG...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCCCCAGTCTCATCCACTaGAGGTTTGCCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QDNLAFELCCRTGKDLNFPSLIH*RFAPAT
Trigger: GGTGGCTGGGGCAAACCTCCAGTGGATGAGACTGGG...GAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGGGCTGTTCTCTTCTCTaGCAACACAGTGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKGCSLL*QHSEEL
Trigger: CAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCC...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTTCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGSSSAQ*VQGSPF
Trigger: GAATGGAGACCCCTGAACTCATTGAGCTGAGGAAGA...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAATAAGAACATGAAATaGCAAGTCCTTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: HCYFLCRARALIWLFLLPNKNMK*QVLGNC
Trigger: GCAGTTCCCAAGGACTTGTCATTTCATGTTCTTATT...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp TTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGATCTTGGCAATCTCCTaGTGTCGTTCCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FELCCRTGKDLNFWSQGQILAIS*CRSCSS
Trigger: ACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGAT...CTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACGGTGGTCCATATCGCTaGATGGCAATCAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDGGPYR*MAISHG
Trigger: CCCATGGCTGATTGCCATGCAGCGATATGGACCACC...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGATAAGGCCACTGTCTaGAGGGGTAATAAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEDKATV*RGNKAC
Trigger: ACAGGCTTTATTACCCCTGCAGACAGTGGCCTTATC...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR GCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACTGCTGCTCCCGCACATaGTCCTCATACTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDCCSRT*SSYFWV
Trigger: GACCCAGAAGTATGAGGAGCATGTGCGGGAGCAGCA...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACGGGGGCCCCAAATTTaGTGGGTGGGCCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSRGPQI*WVGHRK
Trigger: TTTCCTATGGCCCACCCACCAAATTTGGGGCCCCCG...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTGAAATTCAGCAGCATTaGTTCCAAACACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPEIQQH*FQTRPH
Trigger: ATGGGGACGTGTTTGGAACCAATGCTGCTGAATTTC...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGAAAGCCTGTCTCATCTaGTTTGTCTTCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: EMTSPWELRERWFLCEAQKACLI*FVFITF
Trigger: GAAAGTGATGAAGACAAACCAGATGAGACAGGCTTT...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACACACAGATTTCAGCCTaGGGTTGGCGTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDTQISA*GWRHHQ
Trigger: CTGGTGGTGACGCCAACCCCAGGCTGAAATCTGTGT...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTAGCTAGGGCGCTAATCTaGCTATTTTTACTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLARALI*LFLLPK
Trigger: CTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGC...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp ATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTAATAAGAACATGAAATaGCAAGTCCTTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: MRRLIPVYVRGYWGSPVINKNMK*QVLGNC
Trigger: GCAGTTCCCAAGGACTTGTCATTTCATGTTCTTATT...AATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTAGACAATTTAGCTTTTaGGCTATGTTGTCGCACAGG +
Preference number: 4 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPRQFSF*AMLSHR
Trigger: CCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCT...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACCTAGAGAATCTCAACATCAGCTaGTGGGGAATCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: LAIFTPQGQSSKVKPDLENLNIS*WGIRAT
Trigger: CGTGGCTCTGATTCCCCAGCAGCTGATGTTGAGATT...CTCTAGGTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCCTGGGGTGCCCATCTTaGCAATCTCCTGCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: QDNLAFELCCRTGKDLNFLGCPS*QSPAVV
Trigger: AACGACAGCAGGAGATTGCCAAGATGGGCACCCCAG...GAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACACCCCTCGCACCCGCTaGGGCTTTTTCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDTPRTR*GFFFFF
Trigger: AAAGAAGAAGAAAAAGCCCCAGCGGGTGCGAGGGGT...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCGTCCATATCGCTGCATaGCAATCAGCCATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QDNLAFELCCRTGKDLNFVHIAA*QSAMGE
Trigger: CTCCCCCATGGCTGATTGCCATGCAGCGATATGGAC...GAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGAAATTCAGCAGCATTaGTTCCAAACACGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EHEMTSPWELRERWFLCEEIQQH*FQTRPH
Trigger: ATGGGGACGTGTTTGGAACCAATGCTGCTGAATTTC...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CCA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTAAAGCCTGTCTCATCTaGTTTGTCTTCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGKACLI*FVFITF
Trigger: GAAAGTGATGAAGACAAACCAGATGAGACAGGCTTT...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACCTAGAGATTTCAGCCTGGGGTTaGCGTCACCACCAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LAIFTPQGQSSKVKPDLEISAWG*RHHQSN
Trigger: ATTTGACTGGTGGTGACGCCAACCCCAGGCTGAAAT...CTCTAGGTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
3UTR CAA 72 bp TTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTaGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LAFELCCRTGKD*NFWSQGQLGRP
Trigger: AGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACTCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDSSSAQ*VQGSPF
Trigger: GAATGGAGACCCCTGAACTCATTGAGCTGAGGAAGA...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCAAACACAGTGAAGAGCTaGGGTGTCTCACTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSNTVKS*GVSLPS
Trigger: GGACGGAAGTGAGACACCTCAGCTCTTCACTGTGTT...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACAATCTCAACATCAGCTaGTGGGGAATCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDNLNIS*WGIRAT
Trigger: CGTGGCTCTGATTCCCCAGCAGCTGATGTTGAGATT...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTTCTGTTTGGCAGCGTaGTCAGCCACCATGTCACTG +
Preference number: 4 (lower is better)
Translates to: QDNLAFELCCRTGKDLNFFCLAA*SATMSL
Trigger: CAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAA...GAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACTGCTCCTCATACTTCTaGGTCATGGCCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDCSSYF*VMAIGS
Trigger: GGATCCTATGGCCATGACCCAGAAGTATGAGGAGCA...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp TTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGAAGGACTTGAACTTCTaGTCACAAGGTCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FELCCRTGKDLNFWSQGQKDLNF*SQGQLG
Trigger: TCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTT...CTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCATCTTGGCAATCTCCTaGTGTCGTTCCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QDNLAFELCCRTGKDLNFILAIS*CRSCSS
Trigger: ACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGAT...GAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp CTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACCTAGAGTCATCACTGTCCTTGTaGTCCTCTTCAAATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LAIFTPQGQSSKVKPDLESSLSL*SSSNPF
Trigger: GAAGGGATTTGAAGAGGAGCACAAGGACAGTGATGA...CTCTAGGTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACGATAAGGCCACTGTCTaGAGGGGTAATAAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDDKATV*RGNKAC
Trigger: ACAGGCTTTATTACCCCTGCAGACAGTGGCCTTATC...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR TCA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACTCCTCAGTCTTGGTCTaGAATTCAGCAGCATTGGTT +
Preference number: 4 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDSSVLV*NSAALV
Trigger: AACCAATGCTGCTGAATTTCAGACCAAGACTGAGGA...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR GCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCAGATAAGGCCACTGTCTaGAGGGGTAATAAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSDKATV*RGNKAC
Trigger: ACAGGCTTTATTACCCCTGCAGACAGTGGCCTTATC...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CAAGACAATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCGCTAGGGCGCTAATCTaGCTATTTTTACTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: QDNLAFELCCRTGKDLNFARALI*LFLLPK
Trigger: CTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGC...GAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATTGTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGAAGGACTTGAACTTCTaGTCACAAGGTCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWKDLNF*SQGQLG
Trigger: TCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTT...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGCTTCTTCCTCAGTCTTaGTCTGAAATTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWLLPQS*SEIQQH
Trigger: ATGCTGCTGAATTTCAGACCAAGACTGAGGAAGAAG...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACTTCTTCCTCAGTCTTaGTCTGAAATTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSLLPQS*SEIQQH
Trigger: ATGCTGCTGAATTTCAGACCAAGACTGAGGAAGAAG...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CCA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCAAAAGCCTGTCTCATCTaGTTTGTCTTCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSKACLI*FVFITF
Trigger: GAAAGTGATGAAGACAAACCAGATGAGACAGGCTTT...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS GCA 90 bp GGCGCGCGACCAACCCGGAAGCTGGGGCCAGCCTCAGGGCCCACTTaGCGGAACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GARPTRKLGPASGPT*RNFRWRRMPRPLWL
Trigger: CAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTGAGGCTGGCCCCAGCTTCCGGGTTGGTCGCGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 90 bp TGGTTGGGAGGCGACGCGCACTCAGGCACACCCGCTGCCGTGCGCTaGGCGACGGGATTCGCCGCAGACGCACCTTTCTCTAGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: WLGGDAHSGTPAAVR*ATGFAADAPFSSGP
Trigger: GGGGCCACTAGAGAAAGGTGCGTCTGCGGCGAATCCCGTCGCCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS CCA 90 bp CTTGCCGGAACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTGGTTaGGAGGCGACGCGCACTCAGGCACACCCGCTGCCGTGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: LAGTSGGAVCHVLSG*EATRTQAHPLPCAG
Trigger: CCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 90 bp CCCACTTGCCGGAACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTaGTTGGGAGGCGACGCGCACTCAGGCACACCCGCTGCCGTGCGC +
Preference number: 5 (lower is better)
Translates to: PTCRNFRWRRMPRPL*LGGDAHSGTPAAVR
Trigger: GCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 90 bp CGGAAGCTGGGGCCAGCCTCAGGGCCCACTTGCCGGAACTTCCGGTaGCGCCGTATGCCACGTCCTCTCTGGTTGGGAGGCGACGCGCAC +
Preference number: 5 (lower is better)
Translates to: RKLGPASGPTCRNFR*RRMPRPLWLGGDAH
Trigger: GTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTGAGGCTGGCCCCAGCTTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS GCA 90 bp GGTGGCGGCGGCGGCAGCTGCAATTCTGCTTTGGGAGGCTCGGGATaGTCCGTCGCCATCTTAGCCGCAGGAAGGCGCGCGACCAACCCG +
Preference number: 5 (lower is better)
Translates to: GGGGGSCNSALGGSG*SVAILAAGRRATNP
Trigger: CGGGTTGGTCGCGCGCCTTCCTGCGGCTAAGATGGCGACGGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGCTGCCGCCGCCGCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS GCA 90 bp ACGTCCTCTCTGGTTGGGAGGCGACGCGCACTCAGGCACACCCGCTaGCGTGCGCTGGGCGACGGGATTCGCCGCAGACGCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: TSSLVGRRRALRHTR*RALGDGIRRRRTFL
Trigger: GAGAAAGGTGCGTCTGCGGCGAATCCCGTCGCCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS GCA 90 bp GGCCAGCCTCAGGGCCCACTTGCCGGAACTTCCGGTGGCGCCGTATaGCACGTCCTCTCTGGTTGGGAGGCGACGCGCACTCAGGCACAC +
Preference number: 5 (lower is better)
Translates to: GQPQGPLAGTSGGAV*HVLSGWEATRTQAH
Trigger: GTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTGAGGCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 90 bp GGCCTGAAGCTCCTGGGCAGCCCAGGCGCCATAGTGGCCTGGAGGTaGCGGCGGCGGCAGCTGCAATTCTGCTTTGGGAGGCTCGGGATG +
Preference number: 5 (lower is better)
Translates to: GLKLLGSPGAIVAWR*RRRQLQFCFGRLGM
Trigger: CATCCCGAGCCTCCCAAAGCAGAATTGCAGCTGCCGCCGCCGCCACCTCCAGGCCACTATGGCGCCTGGGCTGCCCAGGAGCTTCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000531041.1
ENST00000531589.5
ENST00000533595.5
CDS GCA 90 bp CTCTCTGGTTGGGAGGCGACGCGCACTCAGGCACACCCGCTGCCGTaGGCTGGGCGACGGGATTCGCCGCAGACGCACCTTTCTCTAGTG +
Preference number: 5 (lower is better)
Translates to: LSGWEATRTQAHPLP*AGRRDSPQTHLSLV
Trigger: CACTAGAGAAAGGTGCGTCTGCGGCGAATCCCGTCGCCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS CCA 90 bp CAACTTGGCCTGAAGCTCCTGGGCAGCCCAGGCGCCATAGTGGCCTaGAGGTGGCGGCGGCGGCAGCTGCAATTCTGCTTTGGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: QLGLKLLGSPGAIVA*RWRRRQLQFCFGRL
Trigger: GAGCCTCCCAAAGCAGAATTGCAGCTGCCGCCGCCGCCACCTCCAGGCCACTATGGCGCCTGGGCTGCCCAGGAGCTTCAGGCCAAGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531041.1
ENST00000531589.5
ENST00000533595.5
CDS CCA 90 bp GGCTCACCCACACGGAGAGGAGGCGGGGGCCCCAAATTTGGTGGGTaGGCCATAGGAAAGCCAAGGCCAAGGCCTGGTGGAGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSPTRRGGGGPKFGG*AIGKPRPRPGGGGG
Trigger: CCCACCACCTCCACCAGGCCTTGGCCTTGGCTTTCCTATGGCCCACCCACCAAATTTGGGGCCCCCGCCTCCTCTCCGTGTGGGTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000322535.11
ENST00000524475.1
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531589.5
ENST00000533421.2
ENST00000533595.5
CDS GCA 90 bp GCGGGTGTAGCTCTGCAGCCGCTCCACCAGCTCCTCGCGATTACCTaGAGGGCAAAGTACACGATCAATGGGGCAGGCCAGCCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: AGVALQPLHQLLAIT*RAKYTINGAGQPGQ
Trigger: CTGGCCGGGCTGGCCTGCCCCATTGATCGTGTACTTTGCCCTGCAGGTAATCGCGAGGAGCTGGTGGAGCGGCTGCAGAGCTACACCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524475.1
CDS CCA 90 bp CACTGGCTCACCCACACGGAGAGGAGGCGGGGGCCCCAAATTTGGTaGGTGGGCCATAGGAAAGCCAAGGCCAAGGCCTGGTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HWLTHTERRRGPQIW*VGHRKAKAKAWWRW
Trigger: CCACCTCCACCAGGCCTTGGCCTTGGCTTTCCTATGGCCCACCCACCAAATTTGGGGCCCCCGCCTCCTCTCCGTGTGGGTGAGCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000322535.11
ENST00000524475.1
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531589.5
ENST00000533421.2
ENST00000533595.5
CDS CCA 90 bp CCACTAGAGGGCACCATGCCACTGAAAACGGCAGGCCAGGGTCCCTaGCTCTCACCCAGCCCAGCGCCCCTGGAAGCGCCTACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: PLEGTMPLKTAGQGP*LSPSPAPLEAPTFC
Trigger: ACAGAAGGTAGGCGCTTCCAGGGGCGCTGGGCTGGGTGAGAGCCAGGGACCCTGGCCTGCCGTTTTCAGTGGCATGGTGCCCTCTAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 90 bp CCCACTGGAGCAGCTCGAGGACCCAGAGGAGTGCGCACACCAATCTaGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PTGAARGPRGVRTPI*PMSCGGRGTGVPIL
Trigger: CAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTCGAGCTGCTCCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530322.5
ENST00000533595.5
CDS CCA 90 bp GCTCCTCGCGATTACCCTGGATCGGAGCTCCGATCTCTGCCAACTTaGCCTGAAGCTCCTGGGCAGCCCAGGCGCCATAGTGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: APRDYPGSELRSLPT*PEAPGQPRRHSGLE
Trigger: CTCCAGGCCACTATGGCGCCTGGGCTGCCCAGGAGCTTCAGGCCAAGTTGGCAGAGATCGGAGCTCCGATCCAGGGTAATCGCGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531041.1
ENST00000531589.5
ENST00000533595.5
CDS GCA 90 bp CTCCACCAGCTCCTCGCGATTACCCTGGATCGGAGCTCCGATCTCTaGCAACTTGGCCTGAAGCTCCTGGGCAGCCCAGGCGCCATAGTG +
Preference number: 5 (lower is better)
Translates to: LHQLLAITLDRSSDL*QLGLKLLGSPGAIV
Trigger: CACTATGGCGCCTGGGCTGCCCAGGAGCTTCAGGCCAAGTTGGCAGAGATCGGAGCTCCGATCCAGGGTAATCGCGAGGAGCTGGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531041.1
ENST00000531589.5
ENST00000533595.5
CDS GCA 90 bp GGATCCAGCTCCAACTCTTCAGGCGCCAGCGCCACTTCCACACCTTaGAGCTCAGGAGCCGGGCCCTTCCGGCTCATAACCGTGGACATG +
Preference number: 5 (lower is better)
Translates to: GSSSNSSGASATSTP*SSGAGPFRLITVDM
Trigger: CATGTCCACGGTTATGAGCCGGAAGGGCCCGGCTCCTGAGCTGCAAGGTGTGGAAGTGGCGCTGGCGCCTGAAGAGTTGGAGCTGGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS CCA 90 bp ACTGGAGCAGCTACTCGAGGACCCAGAGGAGTGCGCACACCAATCTaGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: TGAATRGPRGVRTPI*PMSCGGRGTGVPIL
Trigger: CAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTCGAGTAGCTGCTCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
CDS TCA 90 bp TGCTTGGCACGCTCCTCCTGCTGCATCAGCAATGCCGCCTGCTGCTaGGCCAACTTCAGCCGCTCCTCCTCTGACAGTGCCACTGGCTCA +
Preference number: 5 (lower is better)
Translates to: CLARSSCCISNAACC*ANFSRSSSDSATGS
Trigger: TGAGCCAGTGGCACTGTCAGAGGAGGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531589.5
ENST00000533421.2
ENST00000533595.5
CDS GCA 90 bp TCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTTGGCAATCTCCTaGTGTCGTTCCTGCTCCAGTAACACAGCTGCCCGCTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SCGGRGTGVPILAIS*CRSCSSNTAARFCC
Trigger: GCAGCAGAAGCGGGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000530322.5
ENST00000533595.5
CDS CCA 90 bp TCTGGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTTaGCAATCTCCTGCTGTCGTTCCTGCTCCAGTAACACAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGPCLVGAEGLGCPS*QSPAVVPAPVTQLP
Trigger: GGGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000530322.5
ENST00000533595.5
CDS-3UTR CAA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCCGCCACTTCCACACCTaGCAGCTCAGGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: TSPWELRERWFLCEAQASRHFHT*QLRSRA
Trigger: GGCCCGGCTCCTGAGCTGCAAGGTGTGGAAGTGGCG...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGACGCCACTTCCACACCTaGCAGCTCAGGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SPWELRERWFLCEAQASRRHFHT*QLRSRA
Trigger: GGCCCGGCTCCTGAGCTGCAAGGTGTGGAAGTGGCG...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 90 bp TCTGGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTTaGCAATCTCCTGCTGTCGTTCCTGCTCCAGTAACACAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SGPCLVGAEGLGCPS*QSPAVVPAPVTQLP
Trigger: AGGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS TCA 90 bp CACCAGTGGCGTGGCACAGGCACAGAGTTCCGAGTGGCCTTGAGGTaGACCAAGAGCTTAGGGTCCTGCGCTGTCACATCGTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: HQWRGTGTEFRVALR*TKSLGSCAVTSCIS
Trigger: GGAGATGCACGATGTGACAGCGCAGGACCCTAAGCTCTTGGTTCACCTCAAGGCCACTCGGAACTCTGTGCCTGTGCCACGCCACTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS-3UTR CAA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCCGCCACTTCCACACCTaGCAGCTCAGGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: HCYFLCRARALIWLFLLPRHFHT*QLRSRA
Trigger: GGCCCGGCTCCTGAGCTGCAAGGTGTGGAAGTGGCG...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGAGCCACGGGACCGGGTaGAGTCTTTCTCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALSHGTG*SLSPGP
Trigger: GGGACCGGGAGAAAGACTCAACCCGGTCCCGTGGCT...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCTCATCCACTGGAGGTTaGCCCCAGCCACCAGCATGG +
Preference number: 5 (lower is better)
Translates to: TSPWELRERWFLCEAQASSSTGG*PQPPAW
Trigger: CCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATGA...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS GCA 90 bp CCCAGAAGCCTTAGTTCTAGGACCCAGCTTTCTCTAAGGCTCCACTaGCCCTTCAGGGACCTAATGAGTCCAAGGCCAGGGCTGCCACCT +
Preference number: 5 (lower is better)
Translates to: PRSLSSRTQLSLRLH*PFRDLMSPRPGLPP
Trigger: AGGTGGCAGCCCTGGCCTTGGACTCATTAGGTCCCTGAAGGGGCAGTGGAGCCTTAGAGAAAGCTGGGTCCTAGAACTAAGGCTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531589.5
CDS CCA 90 bp GGCTCTCCTTCAGCTGCAGGATCTTCTCCAAAGCCTGGGGGATCTTaGGGCCCACAGAGGGGTCATCCATCTCTCTGTTCTCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: GSPSAAGSSPKPGGS*GPQRGHPSLCSHLQ
Trigger: CTGGAGATGAGAACAGAGAGATGGATGACCCCTCTGTGGGCCCCAAGATCCCCCAGGCTTTGGAGAAGATCCTGCAGCTGAAGGAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000525207.1
ENST00000528302.5
ENST00000530322.5
ENST00000533595.5
CDS CCA 90 bp GCCCCGTTTGCCCTGCAGGTATTTGCGCTTAAAACACCAGTGGCGTaGCACAGGCACAGAGTTCCGAGTGGCCTTGAGGTGAACCAAGAG +
Preference number: 5 (lower is better)
Translates to: APFALQVFALKTPVA*HRHRVPSGLEVNQE
Trigger: CTCTTGGTTCACCTCAAGGCCACTCGGAACTCTGTGCCTGTGCCACGCCACTGGTGTTTTAAGCGCAAATACCTGCAGGGCAAACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS-3UTR CAA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGCTGCAATTCTGCTTaGGGAGGCTCGGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: TSPWELRERWFLCEAQASSCNSA*GGSGCS
Trigger: GGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGCT...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GGTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGAACACAGCTGCCTGCTaGGCACGCTCCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GWRHHQSNAPSNPSLCSWNTAAC*ARSSCC
Trigger: GCAGCAGGAGGAGCGTGCCAAGCAGGCAGCTGTGTT...CCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS TCA 90 bp GCAGCGTGCTCAGCCACCATGTCACTGAAGTCCTCCTTCTCTACTTaGGCCTGCTGCTCCCGCACATGCTCCTCATACTTCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: AACSATMSLKSSFST*ACCSRTCSSYFWVM
Trigger: CATGACCCAGAAGTATGAGGAGCATGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS TCA 90 bp AAGCGCCTACCTTCTGTTTGGCAGCGTGCTCAGCCACCATGTCACTaGAGTCCTCCTTCTCTACTTGAGCCTGCTGCTCCCGCACATGCT +
Preference number: 5 (lower is better)
Translates to: KRLPSVWQRAQPPCH*SPPSLLEPAAPAHA
Trigger: AGCATGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAAGGTAGGCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 90 bp AACAGCTCTCAGGGATGGGCGAGTTCAGCCCAGGGATTTTCAGGTTaGGATACGATGGGGGTGGTCCATATCGCTGCATGGCAATCAGCC +
Preference number: 5 (lower is better)
Translates to: NSSQGWASSAQGFSG*DTMGVVHIAAWQSA
Trigger: GGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCGCCCATCCCTGAGAGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTGGAGGTGGAGCGGCTTaGTCCCCATCTTCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGGGGAA*SPSSPL
Trigger: GAGAGGGGAAGATGGGGACAAAGCCGCTCCACCTCC...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTCTCAATGCCCCGTTaGCCCTGCAGGTATTTGCGC +
Preference number: 5 (lower is better)
Translates to: TSQAHCYFLCRARALIWLFSMPR*PCRYLR
Trigger: GCGCAAATACCTGCAGGGCAAACGGGGCATTGAGAA...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCAGGACCTTGTGGGCATTaGGTCCTACTGGCATCCCCA +
Preference number: 5 (lower is better)
Translates to: MTSPWELRERWFLCEAQAGPCGH*VLLASP
Trigger: TGGGGATGCCAGTAGGACCAAATGCCCACAAGGTCC...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGTGGTCACAAGGTCAGTaGGGAAGGCCTGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGWSQGQ*GRPALA
Trigger: GGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCA...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS CCA 90 bp AGAAGCGGAAACAAAAGATACAGGTGGCACCTCCACTCAGCGCCTTaGAGAGCTTCTGAGCTCCCCAAGGATGCAGCCTCTGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RSGNKRYRWHLHSAP*RASELPKDAASAVL
Trigger: CAGAACTGCAGAGGCTGCATCCTTGGGGAGCTCAGAAGCTCTCCAAGGCGCTGAGTGGAGGTGCCACCTGTATCTTTTGTTTCCGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS-3UTR CAA 90 bp CACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAGCTGCAATTCTGCTTaGGGAGGCTCGGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: HCYFLCRARALIWLFLLPSCNSA*GGSGCS
Trigger: GGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGCT...GGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCATGGATGCCTGTGCGTTaGATGAAGTCTGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPWMPVR*MKSGSS
Trigger: CGAGCTGCCAGACTTCATCAAACGCACAGGCATCCA...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCACCAGGGATTTTCAGGTaGGGATACGATGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPPGIFR*GYDGGG
Trigger: ACCACCCCCATCGTATCCCAACCTGAAAATCCCTGG...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp AGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCAGAAACTCCTTATATTTCTaGCTGCCCCCACGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SPWELRERWFLCEAQASRNSLYF*LPPRLS
Trigger: GGACAGCCGTGGGGGCAGCAAGAAATATAAGGAGTT...TCTGGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS TCA 90 bp TCATGGCCCCTCCAACAGTGGCTGTTCTCTTCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCACTTCCGTCCATCGCCTCCTCAATCT +
Preference number: 5 (lower is better)
Translates to: SWPLQQWLFSSLATQ*RAEVSHFRPSPPQS
Trigger: AGATTGAGGAGGCGATGGACGGAAGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCACTGTTGGAGGGGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTAGGAGGTGGAGCGGCTTaGTCCCCATCTTCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLGGGAA*SPSSPL
Trigger: GAGAGGGGAAGATGGGGACAAAGCCGCTCCACCTCC...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCAAATCCCTTCTTCTaGGGGGCTGCAGAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: MTSPWELRERWFLCEAQASNPFF*GAAEFS
Trigger: GGAGAACTCTGCAGCCCCCAAGAAGAAGGGATTTGA...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CTCTGCCGCGCTAGGGCGCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTACGAGCCACCAGCTGCTaGAGTTCAGCCACAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LCRARALIWLFLLPKDKVRATSC*SSATVK
Trigger: CTTCACTGTGGCTGAACTCAAGCAGCTGGTGGCTCG...TACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGCGCCCTAGCGCGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTAATGGTCAGCTTTGGCTaGGTCTGCCACTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TSQAHCYFLCRARALIWLMVSFG*VCHLKK
Trigger: CTTCTTCAAGTGGCAGACCAAGCCAAAGCTGACCAT...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGCCAGGGATTTTCAGGTaGGGATACGATGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: EMTSPWELRERWFLCEAQPGIFR*GYDGGG
Trigger: ACCACCCCCATCGTATCCCAACCTGAAAATCCCTGG...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp GGACAAAGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTTCATCCACTGGAGGTTaGCCCCAGCCACCAGCATGG +
Preference number: 5 (lower is better)
Translates to: GQSSKVKPDLEVLPPSLPSSTGG*PQPPAW
Trigger: CCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATGA...AGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACTTTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATCCTGTCATAAATGTGGGTaGATCCCATCATGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: TSPWELRERWFLCEAQASCHKCG*IPSWPL
Trigger: GAGGGGCCATGATGGGATCAACCCACATTTATGACA...GGATGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGATTTCAGCCTGGGGTaGGCGTCACCACCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSDFSLG*ASPPVK
Trigger: TTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATC...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTATGGTCACAAGGTCAGTaGGGAAGGCCTGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLWSQGQ*GRPALA
Trigger: GGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCA...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 90 bp GAAACAAATGTGATGAGCCCTTCAACTGCCCCAGCATACCACACCTaGGAGTTTGCAGGCCACAGAACAGAGGGGAGACTCATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: ETNVMSPSTAPAYHT*EFAGHRTEGRLMES
Trigger: GCTCTCCATGAGTCTCCCCTCTGTTCTGTGGCCTGCAAACTCTCAGGTGTGGTATGCTGGGGCAGTTGAAGGGCTCATCACATTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 90 bp TCATGGCCCCTCCAACAGTGGCTGTTCTCTTCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCACTTCTGCGAAGGACAATGGGATCAG +
Preference number: 5 (lower is better)
Translates to: SWPLQQWLFSSLATQ*RAEVSHFCEGQWDQ
Trigger: CTGATCCCATTGTCCTTCGCAGAAGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCACTGTTGGAGGGGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS GCA 90 bp ACCTTGACCTTTCCCCTTTCCATCAATATCACTATGGGAGGCTCCTaGAGCCACACTCCCAGAGGAGAAGCCAAACCCGGAAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: TLTFPLSINITMGGS*SHTPRGEAKPGKDS
Trigger: ACTGTCCTTTCCGGGTTTGGCTTCTCCTCTGGGAGTGTGGCTGCAGGAGCCTCCCATAGTGATATTGATGGAAAGGGGAAAGGTCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 90 bp TTTTTAGATACGGACACTGTGTCCTCCTCAGTCTCTGACGCTGACTaGCCCAGGGACGAGCGAGCATCTGTTTCCATTTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FLDTDTVSSSVSDAD*PRDERASVSISSSS
Trigger: GGAGGAAGAGGAAATGGAAACAGATGCTCGCTCGTCCCTGGGCCAGTCAGCGTCAGAGACTGAGGAGGACACAGTGTCCGTATCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000525207.1
ENST00000528302.5
ENST00000530322.5
ENST00000533595.5
CDS-3UTR CAA 90 bp ACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGTCAAATCCCTTCTTCTaGGGGGCTGCAGAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGKDLNFWSQGQLGRPALSNPFF*GAAEFS
Trigger: GGAGAACTCTGCAGCCCCCAAGAAGAAGGGATTTGA...CAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGGCATGTCATAAATGTGGGTaGATCCCATCATGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: MTSPWELRERWFLCEAQACHKCG*IPSWPL
Trigger: GAGGGGCCATGATGGGATCAACCCACATTTATGACA...TGCCTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp TTGAACTTCTGGTCACAAGGTCAGTTGGGAAGGCCTGCCCTGGCCTACTTCCCACGCACAGGTAAGGACTaGAACTTCTGGTCACAAGGT +
Preference number: 5 (lower is better)
Translates to: LNFWSQGQLGRPALAYFPRTGKD*NFWSQG
Trigger: ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG...TGGGAAGTAGGCCAGGGCAGGCCTTCCCAACTGACCTTGTGACCAGAAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 90 bp CCTCCAACAGTGGCTGTTCTCTTCTCTGGCAACACAGTGAAGAGCTaGGGTGTCTCACTTCTGCGAAGGACAATGGGATCAGGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: PPTVAVLFSGNTVKS*GVSLLRRTMGSGPK
Trigger: TTTTGGGCCTGATCCCATTGTCCTTCGCAGAAGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCACTGTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 90 bp TCTCACCGTCCATCGCCTCCTCAATCTTCTTCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATTCCAGCAGGCACTGATGAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: SHRPSPPQSSSSSAQ*VQGSPFQQALMKSL
Trigger: GAGGCTTTTCATCAGTGCCTGCTGGAATGGAGACCCCTGAACTCATTGAGCTGAGGAAGAAGAAGATTGAGGAGGCGATGGACGGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530981.1
CDS CCA 90 bp TTCACAGGGTGGTGGGTAGAGTACACAGGTACTTGTGCCTCACAATaGGGAGGACTGCTTCAGTCCTGCCTCAAGAACCCCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: FTGWWVEYTGTCASQ*GGLLQSCLKNPKTR
Trigger: TCTTGTTTTGGGGTTCTTGAGGCAGGACTGAAGCAGTCCTCCCCATTGTGAGGCACAAGTACCTGTGTACTCTACCCACCACCCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 90 bp TGGCTGAGTTCCTCCCCCTCATCGTCCTTAAAGAGGGCAGCCCACTaGAGGATTTCTAAGACTTCCAAATCTAAGGAAGCACAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: WLSSSPSSSLKRAAH*RISKTSKSKEAQSS
Trigger: GCTGCTCTGTGCTTCCTTAGATTTGGAAGTCTTAGAAATCCTCCAGTGGGCTGCCCTCTTTAAGGACGATGAGGGGGAGGAACTCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS-3UTR CAA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACAGCCACGGGACCGGGTaGAGTCTTTCTCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDSHGTG*SLSPGP
Trigger: GGGACCGGGAGAAAGACTCAACCCGGTCCCGTGGCT...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAGCCCAGTTCTTCTTGGACAGCTaGGGGGCTTCTGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: EMTSPWELRERWFLCEAQFFLDS*GASGFF
Trigger: AAAGAAGCCAGAAGCCCCCAAGCTGTCCAAGAAGAA...CTGGGCTTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTACGAGCCACCAGCTGCTaGAGTTCAGCCACAGTGAAG +
Preference number: 5 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLRATSC*SSATVK
Trigger: CTTCACTGTGGCTGAACTCAAGCAGCTGGTGGCTCG...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGGGCTTGGTCTGCCACTaGAAGAAGGCATCATGCAGT +
Preference number: 5 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGGLVCH*KKASCS
Trigger: ACTGCATGATGCCTTCTTCAAGTGGCAGACCAAGCC...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTACATGGGGGAGGGACCTaGTGGGCATTTGGTCCTACT +
Preference number: 5 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLHGGGT*WAFGPT
Trigger: AGTAGGACCAAATGCCCACAAGGTCCCTCCCCCATG...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAACATGGGGGAGGGACCTaGTGGGCATTTGGTCCTACT +
Preference number: 5 (lower is better)
Translates to: EHEMTSPWELRERWFLCEHGGGT*WAFGPT
Trigger: AGTAGGACCAAATGCCCACAAGGTCCCTCCCCCATG...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTTCATCCACTGGAGGTTaGCCCCAGCCACCAGCATGG +
Preference number: 5 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGSSTGG*PQPPAW
Trigger: CCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATGA...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp ACTTCCCAAGCCCACTGTTACTTCCTCTGCCGCGCTAGGGCGCTAATCTGGCTACCTGTCTCATCTGGTTaGTCTTCATCACTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TSQAHCYFLCRARALIWLPVSSG*SSSLSS
Trigger: GGAAGAAAGTGATGAAGACAAACCAGATGAGACAGG...TAGCCAGATTAGCGCCCTAGCGCGGCAGAGGAAGTAACAGTGGGCTTGGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GTTGGCGTCACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTAACTCCTTATATTTCTaGCTGCCCCCACGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: VGVTTSQMRRLIPVYVRGNSLYF*LPPRLS
Trigger: GGACAGCCGTGGGGGCAGCAAGAAATATAAGGAGTT...ACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTGACGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 90 bp AATCCTAGCACTGGGTGGGAAGTCCTCTTCCTCCTACCCAAACCTTaGCCTTTCCCCTTTCCATCAATATCACTATGGGAGGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: NPSTGWEVLFLLPKP*PFPFPSISLWEAPA
Trigger: TGCAGGAGCCTCCCATAGTGATATTGATGGAAAGGGGAAAGGTCAAGGTTTGGGTAGGAGGAAGAGGACTTCCCACCCAGTGCTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS TCA 90 bp ATTTTCAGTCTCGCATCGCCTGGCGTTCAAGAGGCGCCCAATAAATaGTTAATCCTAGCACTGGGTGGGAAGTCCTCTTCCTCCTACCCA +
Preference number: 5 (lower is better)
Translates to: IFSLASPGVQEAPNK*LILALGGKSSSSYP
Trigger: TGGGTAGGAGGAAGAGGACTTCCCACCCAGTGCTAGGATTAATCATTTATTGGGCGCCTCTTGAACGCCAGGCGATGCGAGACTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS TCA 90 bp AAAAAGGGCAAGCCTCCGCCTTGCTGTGCCGAGATAAAGAAAGAATaGAGACCGAGCCGTGATGGGGTATATAAGGTCTCCTGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: KKGKPPPCCAEIKKE*RPSRDGVYKVSWRS
Trigger: GCTTCTCCAGGAGACCTTATATACCCCATCACGGCTCGGTCTTCATTCTTTCTTTATCTCGGCACAGCAAGGCGGAGGCTTGCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS GCA 90 bp AGTGATTCCTGCGAGACAGGAAACAAATGTGATGAGCCCTTCAACTaGCCCAGCATACCACACCTGAGAGTTTGCAGGCCACAGAACAGA +
Preference number: 5 (lower is better)
Translates to: SDSCETGNKCDEPFN*PSIPHLRVCRPQNR
Trigger: TCTGTTCTGTGGCCTGCAAACTCTCAGGTGTGGTATGCTGGGGCAGTTGAAGGGCTCATCACATTTGTTTCCTGTCTCGCAGGAATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 90 bp GAACTCCTTCCCCTCATAGTACAGGTCCCCATGGATGGTCAGCTTTaGCTTGGTCTGCCACTTGAAGAAGGCATCATGCAGTTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ELLPLIVQVPMDGQL*LGLPLEEGIMQFLV
Trigger: TACCAGAAACTGCATGATGCCTTCTTCAAGTGGCAGACCAAGCCAAAGCTGACCATCCATGGGGACCTGTACTATGAGGGGAAGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTTCATCATCACTGTCCTaGTGCTCCTCTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: VKPDLEVLPPSLPTKQGSSSSLS*CSSSNP
Trigger: GGGATTTGAAGAGGAGCACAAGGACAGTGATGATGA...ACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CACCACCAGTCAAATGCGCCGTCTAATCCCAGTTTATGTTCGTGGTTACTGGGGTTGCCCTGCAGGTATTaGCGCTTAAAACACCAGTGG +
Preference number: 5 (lower is better)
Translates to: HHQSNAPSNPSLCSWLLGLPCRY*RLKHQW
Trigger: CCACTGGTGTTTTAAGCGCAAATACCTGCAGGGCAA...CCCCAGTAACCACGAACATAAACTGGGATTAGACGGCGCATTTGACTGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGTTCTCAATGCCCCGTTaGCCCTGCAGGTATTTGCGC +
Preference number: 5 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKFSMPR*PCRYLR
Trigger: GCGCAAATACCTGCAGGGCAAACGGGGCATTGAGAA...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp TTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTCAGGGACCTTGTGGGCATTaGGTCCTACTGGCATCCCCA +
Preference number: 5 (lower is better)
Translates to: FELCCRTGKDLNFWSQGQGPCGH*VLLASP
Trigger: TGGGGATGCCAGTAGGACCAAATGCCCACAAGGTCC...CTGACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS GCA 90 bp CATGAAGTAGCTGCGAAGGGGCCTTGGAGTCAGACTCCAAAGTTCTaGCACTCACAAGCTGTATGCCTTTGGGTAAATTACTGTGCGTCT +
Preference number: 5 (lower is better)
Translates to: HEVAAKGPWSQTPKF*HSQAVCLWVNYCAS
Trigger: AGACGCACAGTAATTTACCCAAAGGCATACAGCTTGTGAGTGGCAGAACTTTGGAGTCTGACTCCAAGGCCCCTTCGCAGCTACTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529994.1
CDS CCA 90 bp AGTGTCAGCATCAAAGAGAGAACTGAAGAGCTCACAATTCTGTCATaGCAGTACCTCCCTGCCCAACAACTGCAAGTGAGAGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: SVSIKERTEELTILS*QYLPAQQLQVRGRA
Trigger: AGCCCTTCCTCTCACTTGCAGTTGTTGGGCAGGGAGGTACTGCCATGACAGAATTGTGAGCTCTTCAGTTCTCTCTTTGATGCTGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS-3UTR CAA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTTGGATGCCTGTGCGTTaGATGAAGTCTGGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGWMPVR*MKSGSS
Trigger: CGAGCTGCCAGACTTCATCAAACGCACAGGCATCCA...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 90 bp AGTACAGGTCCCCATGGATGGTCAGCTTTGGCTTGGTCTGCCACTTaGAGAAGGCATCATGCAGTTTCTGGTAGTCGATGTCAATTTTGC +
Preference number: 5 (lower is better)
Translates to: STGPHGWSALAWSAT*RRHHAVSGSRCQFC
Trigger: GCAAAATTGACATCGACTACCAGAAACTGCATGATGCCTTCTTCAAGTGGCAGACCAAGCCAAAGCTGACCATCCATGGGGACCTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 90 bp ATTTTCAGTCTCGCATCGCCTGGCGTTCAAGAGGCGCCCAATAAATaGTTACTTTCTAGCCCAAAGGAAGGCTCTTCTGCTCCCTGTAAC +
Preference number: 5 (lower is better)
Translates to: IFSLASPGVQEAPNK*LLSSPKEGSSAPCN
Trigger: GTTACAGGGAGCAGAAGAGCCTTCCTTTGGGCTAGAAAGTAATCATTTATTGGGCGCCTCTTGAACGCCAGGCGATGCGAGACTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS TCA 90 bp ACCCCAGACTATGCCCATCATCTCCACCTCTCCCGCTGGAAGAGGTaGCAATCTATTGTCCACACAGGAGCCAGAGAAAATACCTTAAAA +
Preference number: 5 (lower is better)
Translates to: TPDYAHHLHLSRWKR*QSIVHTGARENTLK
Trigger: TTTTAAGGTATTTTCTCTGGCTCCTGTGTGGACAATAGATTGTCACCTCTTCCAGCGGGAGAGGTGGAGATGATGGGCATAGTCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 90 bp AAGTCCAGGGAGATCAAGGCAGCTAGAGTTCACAGGATAGAGTACTaGAGAAAAGAGCAGAGAGAGAACTCGAGACCTACAGAAGGTCCT +
Preference number: 5 (lower is better)
Translates to: KSREIKAARVHRIEY*RKEQRENSRPTEGP
Trigger: AGGACCTTCTGTAGGTCTCGAGTTCTCTCTCTGCTCTTTTCTCCAGTACTCTATCCTGTGAACTCTAGCTGCCTTGATCTCCCTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS-3UTR CAA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACACTGGGGTGCCCATCTaGGCAATCTCCTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDTGVPI*AISCCR
Trigger: ACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGT...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp AGTAGTAAGGTCAAACCAGACCTAGAGGTACTTCCCCCAAGCCTTCCTACAAAGGCAGAGTTCTCCAGTTaGTCAAGTTTCTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSKVKPDLEVLPPSLPTKAEFSS*SSFSGS
Trigger: GGAGCCAGAGAAACTTGACAAACTGGAGAACTCTGC...CTTTGTAGGAAGGCTTGGGGGAAGTACCTCTAGGTCTGGTTTGACCTTACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTAGCAGAGTTCTCCAGTTaGTCAAGTTTCTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLAEFSS*SSFSGS
Trigger: GGAGCCAGAGAAACTTGACAAACTGGAGAACTCTGC...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CCCAGTTTATGTTCGTGGTTACTGGGGCAGCCCAGTGATTGTAGAAAGAGACTATTGCCCTGCAGGTATTaGCGCTTAAAACACCAGTGG +
Preference number: 5 (lower is better)
Translates to: PSLCSWLLGQPSDCRKRLLPCRY*RLKHQW
Trigger: CCACTGGTGTTTTAAGCGCAAATACCTGCAGGGCAA...TAGTCTCTTTCTACAATCACTGGGCTGCCCCAGTAACCACGAACATAAACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAAATGGTCAGCTTTGGCTaGGTCTGCCACTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: EHEMTSPWELRERWFLCEMVSFG*VCHLKK
Trigger: CTTCTTCAAGTGGCAGACCAAGCCAAAGCTGACCAT...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGGGACCTTGTGGGCATTaGGTCCTACTGGCATCCCCA +
Preference number: 5 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWGPCGH*VLLASP
Trigger: TGGGGATGCCAGTAGGACCAAATGCCCACAAGGTCC...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAGGTACTTCCCCCAAGCCTTCCTACAAAGCAGGGCAGTGGTGAAACACAGATTCCTGTCTCATCTGGTTaGTCTTCATCACTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EVLPPSLPTKQGSGETQIPVSSG*SSSLSS
Trigger: GGAAGAAAGTGATGAAGACAAACCAGATGAGACAGG...AATCTGTGTTTCACCACTGCCCTGCTTTGTAGGAAGGCTTGGGGGAAGTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAATGTCATAAATGTGGGTaGATCCCATCATGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: EHEMTSPWELRERWFLCECHKCG*IPSWPL
Trigger: GAGGGGCCATGATGGGATCAACCCACATTTATGACA...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS TCA 90 bp GTCAGGCGAGTAATGTGCAAGGGTGTCACATCTCACACATGCACGTaGACACCCAATCATCATGCTCATGAACTACAAAAGGATCAGCAG +
Preference number: 5 (lower is better)
Translates to: VRRVMCKGVTSHTCT*TPNHHAHELQKDQQ
Trigger: CTGCTGATCCTTTTGTAGTTCATGAGCATGATGATTGGGTGTTCACGTGCATGTGTGAGATGTGACACCCTTGCACATTACTCGCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS CCA 90 bp GGCACTGAAGAGGACCAAGATGGATACAAGAAATTACAACTAAGCTaGCAAAGGCAAGAACAAGCTAAAAAGGGCAAGCCTCCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: GTEEDQDGYKKLQLS*QRQEQAKKGKPPPC
Trigger: GCAAGGCGGAGGCTTGCCCTTTTTAGCTTGTTCTTGCCTTTGCCAGCTTAGTTGTAATTTCTTGTATCCATCTTGGTCCTCTTCAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS CCA 90 bp CAATTCATTCAACAAAACGTACCCAGTGCCTGTCTGCCAGCGCTCTaGCTGGGCACTGAAGAGGACCAAGATGGATACAAGAAATTACAA +
Preference number: 5 (lower is better)
Translates to: QFIQQNVPSACLPAL*LGTEEDQDGYKKLQ
Trigger: TTGTAATTTCTTGTATCCATCTTGGTCCTCTTCAGTGCCCAGCCAGAGCGCTGGCAGACAGGCACTGGGTACGTTTTGTTGAATGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS-3UTR CAA 90 bp GCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACAAGGTTTCTTCTTGGACAGCTaGGGGGCTTCTGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AFELCCRTGKDLNFWSQGFFLDS*GASGFF
Trigger: AAAGAAGCCAGAAGCCCCCAAGCTGTCCAAGAAGAA...ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACATGGGGGAGGGACCTaGTGGGCATTTGGTCCTACT +
Preference number: 5 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSHGGGT*WAFGPT
Trigger: AGTAGGACCAAATGCCCACAAGGTCCCTCCCCCATG...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGCCAGGGATTTTCAGGTaGGGATACGATGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWPGIFR*GYDGGG
Trigger: ACCACCCCCATCGTATCCCAACCTGAAAATCCCTGG...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp CTAAAAGGAGATGAGGGAGGCTCAGGAGTGTTAAATATTCATCTCTTTCCTTGGGGCTTGGTCTGCCACTaGAAGAAGGCATCATGCAGT +
Preference number: 5 (lower is better)
Translates to: LKGDEGGSGVLNIHLFPWGLVCH*KKASCS
Trigger: ACTGCATGATGCCTTCTTCAAGTGGCAGACCAAGCC...CCAAGGAAAGAGATGAATATTTAACACTCCTGAGCCTCCCTCATCTCCTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GAACATGAAATGACAAGTCCTTGGGAACTGCGGGAGAGGTGGTTCTTGTGTGAACCTGTCTCATCTGGTTaGTCTTCATCACTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EHEMTSPWELRERWFLCEPVSSG*SSSLSS
Trigger: GGAAGAAAGTGATGAAGACAAACCAGATGAGACAGG...TTCACACAAGAACCACCTCTCCCGCAGTTCCCAAGGACTTGTCATTTCATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS-3UTR CAA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCAGATTTCAGCCTGGGGTaGGCGTCACCACCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSDFSLG*ASPPVK
Trigger: TTTGACTGGTGGTGACGCCAACCCCAGGCTGAAATC...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp GCTAATCTGGCTATTTTTACTCCCCAAGGACAAAGTAGTAAGGTCAAACCAGACTCATCATCACTGTCCTaGTGCTCCTCTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: ANLAIFTPQGQSSKVKPDSSSLS*CSSSNP
Trigger: GGGATTTGAAGAGGAGCACAAGGACAGTGATGATGA...GTCTGGTTTGACCTTACTACTTTGTCCTTGGGGAGTAAAAATAGCCAGATTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS-3UTR CAA 90 bp AATTTAGCTTTTGAGCTATGTTGTCGCACAGGTAAGGACTTGAACTTCTGGTCACGCACAGGTAAGGACTaGAACTTCTGGTCACAAGGT +
Preference number: 5 (lower is better)
Translates to: NLAFELCCRTGKDLNFWSRTGKD*NFWSQG
Trigger: ACCTTGTGACCAGAAGTTCAAGTCCTTACCTGTGCG...TGACCAGAAGTTCAAGTCCTTACCTGTGCGACAACATAGCTCAAAAGCTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 90 bp TTATTTTTCTTCCTTGAATATGCAAAGCTTGAGACTTCTGCTTCCTaGCAAGGAGCAAGAGGAACCAGATACACCCTCCTGCCTGAAACA +
Preference number: 5 (lower is better)
Translates to: LFFFLEYAKLETSAS*QGARGTRYTLLPET
Trigger: TGTTTCAGGCAGGAGGGTGTATCTGGTTCCTCTTGCTCCTTGTCAGGAAGCAGAAGTCTCAAGCTTTGCATATTCAAGGAAGAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 90 bp AGACCTGAAAGGATCAAACTATCTCCATATAACTATATTCCCGAATaGGCTGAAGAAAATGTACAGGAATACAAAAATATCTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: RPERIKLSPYNYIPE*AEENVQEYKNILDP
Trigger: TGGGTCCAAGATATTTTTGTATTCCTGTACATTTTCTTCAGCTCATTCGGGAATATAGTTATATGGAGATAGTTTGATCCTTTCAGGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS GCA 72 bp CTGGTTGGGAGGCGACGCGCACTCAGGCACACCCGCTaGCGTGCGCTGGGCGACGGGATTCGCCGCAGACGC +
Preference number: 6 (lower is better)
Translates to: LVGRRRALRHTR*RALGDGIRRRR
Trigger: GCGTCTGCGGCGAATCCCGTCGCCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS GCA 72 bp TGGGAGGCGACGCGCACTCAGGCACACCCGCTGCCGTaGGCTGGGCGACGGGATTCGCCGCAGACGCACCTT +
Preference number: 6 (lower is better)
Translates to: WEATRTQAHPLP*AGRRDSPQTHL
Trigger: AAGGTGCGTCTGCGGCGAATCCCGTCGCCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS CAA 72 bp GAGTCCCGAGAGACTCATTTCCCCGGCGGCCCCGCGTaGCGGGCGCCAAGCGGGAGGCTGGAGCCGATGCCT +
Preference number: 6 (lower is better)
Translates to: ESRETHFPGGPA*RAPSGRLEPMP
Trigger: AGGCATCGGCTCCAGCCTCCCGCTTGGCGCCCGCAACGCGGGGCCGCCGGGGAAATGAGTCTCTCGGGACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS CCA 72 bp GGCGACGCGCACTCAGGCACACCCGCTGCCGTGCGCTaGGCGACGGGATTCGCCGCAGACGCACCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: GDAHSGTPAAVR*ATGFAADAPFS
Trigger: AGAGAAAGGTGCGTCTGCGGCGAATCCCGTCGCCCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS CAA 90 bp GCTCCCAGGGAGTCCCGAGAGACTCATTTCCCCGGCGGCCCCGCGTaGCGGGCGCCAAGCGGGAGGCTGGAGCCGATGCCTCTATCCCAA +
Preference number: 6 (lower is better)
Translates to: APRESRETHFPGGPA*RAPSGRLEPMPLSQ
Trigger: TTGGGATAGAGGCATCGGCTCCAGCCTCCCGCTTGGCGCCCGCAACGCGGGGCCGCCGGGGAAATGAGTCTCTCGGGACTCCCTGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS CAA 90 bp ACTTGCCGGAACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTGGTaGGGAGGCGACGCGCACTCAGGCACACCCGCTGCCGTGCGCTGG +
Preference number: 6 (lower is better)
Translates to: TCRNFRWRRMPRPLW*GGDAHSGTPAAVRW
Trigger: CCAGCGCACGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CAA 90 bp AGGCGCGCGACCAACCCGGAAGCTGGGGCCAGCCTCAGGGCCCACTaGCCGGAACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: RRATNPEAGASLRAH*PELPVAPYATSSLV
Trigger: AACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTGAGGCTGGCCCCAGCTTCCGGGTTGGTCGCGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS GCA 72 bp CCAACCCGGAAGCTGGGGCCAGCCTCAGGGCCCACTTaGCGGAACTTCCGGTGGCGCCGTATGCCACGTCCT +
Preference number: 6 (lower is better)
Translates to: PTRKLGPASGPT*RNFRWRRMPRP
Trigger: AGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTGAGGCTGGCCCCAGCTTCCGGGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 72 bp CCGGCGGCCCCGCGTTGCGGGCGCCAAGCGGGAGGCTaGAGCCGATGCCTCTATCCCAAAAATGTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PAAPRCGRQAGG*SRCLYPKNVSR
Trigger: CCTGCTCACATTTTTGGGATAGAGGCATCGGCTCCAGCCTCCCGCTTGGCGCCCGCAACGCGGGGCCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS CCA 72 bp ACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTGGTTaGGAGGCGACGCGCACTCAGGCACACCCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: TSGGAVCHVLSG*EATRTQAHPLP
Trigger: CGGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS CCA 72 bp GGGCCAGCCTCAGGGCCCACTTGCCGGAACTTCCGGTaGCGCCGTATGCCACGTCCTCTCTGGTTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: GPASGPTCRNFR*RRMPRPLWLGG
Trigger: GCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTGAGGCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 72 bp GGCACCATGCCACTGAAAACGGCAGGCCAGGGTCCCTaGCTCTCACCCAGCCCAGCGCCCCTGGAAGCGCCT +
Preference number: 6 (lower is better)
Translates to: GTMPLKTAGQGP*LSPSPAPLEAP
Trigger: AGGCGCTTCCAGGGGCGCTGGGCTGGGTGAGAGCCAGGGACCCTGGCCTGCCGTTTTCAGTGGCATGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS GCA 72 bp CAGGGCCCACTTGCCGGAACTTCCGGTGGCGCCGTATaGCACGTCCTCTCTGGTTGGGAGGCGACGCGCACT +
Preference number: 6 (lower is better)
Translates to: QGPLAGTSGGAV*HVLSGWEATRT
Trigger: AGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCGGCAAGTGGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 72 bp CGGAACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTaGTTGGGAGGCGACGCGCACTCAGGCACACCCGCT +
Preference number: 6 (lower is better)
Translates to: RNFRWRRMPRPL*LGGDAHSGTPA
Trigger: AGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CAA 72 bp AACTTCCGGTGGCGCCGTATGCCACGTCCTCTCTGGTaGGGAGGCGACGCGCACTCAGGCACACCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: NFRWRRMPRPLW*GGDAHSGTPAA
Trigger: GGCAGCGGGTGTGCCTGAGTGCGCGTCGCCTCCCAACCAGAGAGGACGTGGCATACGGCGCCACCGGAAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529577.5
ENST00000534307.1
CDS GCA 72 bp GGCGGCAGCTGCAATTCTGCTTTGGGAGGCTCGGGATaGTCCGTCGCCATCTTAGCCGCAGGAAGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: GGSCNSALGGSG*SVAILAAGRRA
Trigger: CGCGCGCCTTCCTGCGGCTAAGATGGCGACGGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGCTGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS CCA 72 bp GCAGCTCGAGGACCCAGAGGAGTGCGCACACCAATCTaGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTG +
Preference number: 6 (lower is better)
Translates to: AARGPRGVRTPI*PMSCGGRGTGV
Trigger: CACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTCGAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530322.5
ENST00000533595.5
CDS CAA 72 bp CCTGGAGGTGGCGGCGGCGGCAGCTGCAATTCTGCTTaGGGAGGCTCGGGATGCTCCGTCGCCATCTTAGCC +
Preference number: 6 (lower is better)
Translates to: PGGGGGGSCNSA*GGSGCSVAILA
Trigger: GGCTAAGATGGCGACGGAGCATCCCGAGCCTCCCAAAGCAGAATTGCAGCTGCCGCCGCCGCCACCTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000531041.1
ENST00000533595.5
CDS GCA 72 bp GGCCCACTGGAGCAGCTACTCGAGGACCCAGAGGAGTaGGCACACCAATCTGGCCCATGTCTTGTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: GPLEQLLEDPEE*AHQSGPCLVGA
Trigger: GGCCCCCACAAGACATGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTCGAGTAGCTGCTCCAGTGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
CDS CCA 72 bp CTCACCCACACGGAGAGGAGGCGGGGGCCCCAAATTTaGTGGGTGGGCCATAGGAAAGCCAAGGCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: LTHTERRRGPQI*WVGHRKAKAKA
Trigger: GGCCTTGGCCTTGGCTTTCCTATGGCCCACCCACCAAATTTGGGGCCCCCGCCTCCTCTCCGTGTGGGTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000322535.11
ENST00000524475.1
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531589.5
ENST00000533421.2
ENST00000533595.5
CDS CCA 72 bp GCTACTCGAGGACCCAGAGGAGTGCGCACACCAATCTaGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTG +
Preference number: 6 (lower is better)
Translates to: ATRGPRGVRTPI*PMSCGGRGTGV
Trigger: CACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGATTGGTGTGCGCACTCCTCTGGGTCCTCGAGTAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
CDS CCA 72 bp GGCTCCCATGGGCAAAACTGTAGGAGTGGGGCCCACTaGGCCCACTGGAGCAGCTACTCGAGGACCCAGAGG +
Preference number: 6 (lower is better)
Translates to: GSHGQNCRSGAH*AHWSSYSRTQR
Trigger: CCTCTGGGTCCTCGAGTAGCTGCTCCAGTGGGCCCAGTGGGCCCCACTCCTACAGTTTTGCCCATGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
CDS TCA 72 bp CGCTCCTCCTGCTGCATCAGCAATGCCGCCTGCTGCTaGGCCAACTTCAGCCGCTCCTCCTCTGACAGTGCC +
Preference number: 6 (lower is better)
Translates to: RSSCCISNAACC*ANFSRSSSDSA
Trigger: GGCACTGTCAGAGGAGGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGGAGGAGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322535.11
ENST00000524475.1
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531589.5
ENST00000533421.2
ENST00000533595.5
CDS GCA 72 bp CTGCTGCTTGGCACGCTCCTCCTGCTGCATCAGCAATaGCGCCTGCTGCTGAGCCAACTTCAGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLLGTLLLLHQQ*RLLLSQLQPLL
Trigger: GAGGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAAGCAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000530322.5
CDS GCA 72 bp GGCCGAGGGACTGGGGTGCCCATCTTGGCAATCTCCTaGTGTCGTTCCTGCTCCAGTAACACAGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: GRGTGVPILAIS*CRSCSSNTAAR
Trigger: GCGGGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000530322.5
ENST00000533595.5
CDS GCA 72 bp TCCAACTCTTCAGGCGCCAGCGCCACTTCCACACCTTaGAGCTCAGGAGCCGGGCCCTTCCGGCTCATAACC +
Preference number: 6 (lower is better)
Translates to: SNSSGASATSTP*SSGAGPFRLIT
Trigger: GGTTATGAGCCGGAAGGGCCCGGCTCCTGAGCTGCAAGGTGTGGAAGTGGCGCTGGCGCCTGAAGAGTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS GCA 72 bp TCCCTGCTTGGCACGCTCCTCCTGCTGCATCAGCAATaGCGCCTGCTGCTGAGCCAACTTCAGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLLGTLLLLHQQ*RLLLSQLQPLL
Trigger: GAGGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAAGCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524627.5
ENST00000533595.5
CDS GCA 72 bp TGCCTGCTTGGCACGCTCCTCCTGCTGCATCAGCAATaGCGCCTGCTGCTGAGCCAACTTCAGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: CLLGTLLLLHQQ*RLLLSQLQPLL
Trigger: GAGGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAAGCAGGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS CCA 72 bp ACACGGAGAGGAGGCGGGGGCCCCAAATTTGGTGGGTaGGCCATAGGAAAGCCAAGGCCAAGGCCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: TRRGGGGPKFGG*AIGKPRPRPGG
Trigger: TCCACCAGGCCTTGGCCTTGGCTTTCCTATGGCCCACCCACCAAATTTGGGGCCCCCGCCTCCTCTCCGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000322535.11
ENST00000524475.1
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000531589.5
ENST00000533421.2
ENST00000533595.5
CDS GCA 72 bp GGCCGAGGGACTGGGGTGCCCATCTTGGCAATCTCCTaGTGTCGTTCCTGCTCCAGTAACACAGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: GRGTGVPILAIS*CRSCSSNTAAC
Trigger: GCAGGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528302.5
CDS GCA 72 bp GCTCTGCAGCCGCTCCACCAGCTCCTCGCGATTACCTaGAGGGCAAAGTACACGATCAATGGGGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: ALQPLHQLLAIT*RAKYTINGAGQ
Trigger: CTGGCCTGCCCCATTGATCGTGTACTTTGCCCTGCAGGTAATCGCGAGGAGCTGGTGGAGCGGCTGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524475.1
CDS GCA 72 bp CCGCGTTGCGGGCGCCAAGCGGGAGGCTGGAGCCGATaGCTCTATCCCAAAAATGTGAGCAGGGACTTGATC +
Preference number: 6 (lower is better)
Translates to: PRCGRQAGGWSR*LYPKNVSRDLI
Trigger: GATCAAGTCCCTGCTCACATTTTTGGGATAGAGGCATCGGCTCCAGCCTCCCGCTTGGCGCCCGCAACGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS GCA 72 bp TACCTGCTTGGCACGCTCCTCCTGCTGCATCAGCAATaGCGCCTGCTGCTGAGCCAACTTCAGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: YLLGTLLLLHQQ*RLLLSQLQPLL
Trigger: GAGGAGCGGCTGAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGGAGGAGCGTGCCAAGCAGGTA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531589.5
ENST00000533421.2
CDS CAA 72 bp CATCAGCTGCTGGGGAATCAGAGCCACGGGACCGGGTaGAGTCTTTCTCCCGGTCCCCAGAGCTCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: HQLLGNQSHGTG*SLSPGPQSSQR
Trigger: CCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCGGTCCCGTGGCTCTGATTCCCCAGCAGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
ENST00000530322.5
CDS CAA 90 bp ATCTGGCCCATGTCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTaGGCAATCTCCTGCTGTCGTTCCTGCTCCAGTAACACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: IWPMSCGGRGTGVPI*AISCCRSCSSNTAA
Trigger: GGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACATGGGCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000533595.5
CDS CAA 90 bp TGGCTCTCACCCAGCCCAGCGCCCCTGGAAGCGCCTACCTTCTGTTaGGCAGCGTGCTCAGCCACCATGTCACTGAAGTCCTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: WLSPSPAPLEAPTFC*AACSATMSLKSSFS
Trigger: AGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAAGGTAGGCGCTTCCAGGGGCGCTGGGCTGGGTGAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 72 bp ATCAGCTGCTGGGGAATCAGAGCCACGGGACCGGGTTaGGTCTTTCTCCCGGTCCCCAGAGCTCTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: ISCWGIRATGPG*VFLPVPRALRG
Trigger: TCCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCGGTCCCGTGGCTCTGATTCCCCAGCAGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
ENST00000530322.5
CDS GCA 72 bp GGGGTGCCCATCTTGGCAATCTCCTGCTGTCGTTCCTaGTCCAGTAACACAGCTGCCCGCTTCTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GVPILAISCCRS*SSNTAARFCCS
Trigger: GGAGCAGCAGAAGCGGGCAGCTGTGTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000530322.5
ENST00000533595.5
CDS TCA 72 bp CGTGGCACAGGCACAGAGTTCCGAGTGGCCTTGAGGTaGACCAAGAGCTTAGGGTCCTGCGCTGTCACATCG +
Preference number: 6 (lower is better)
Translates to: RGTGTEFRVALR*TKSLGSCAVTS
Trigger: CGATGTGACAGCGCAGGACCCTAAGCTCTTGGTTCACCTCAAGGCCACTCGGAACTCTGTGCCTGTGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS GCA 72 bp GCGCCCCTGGAAGCGCCTACCTTCTGTTTGGCAGCGTaGTCAGCCACCATGTCACTGAAGTCCTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: APLEAPTFCLAA*SATMSLKSSFS
Trigger: AGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAAGGTAGGCGCTTCCAGGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp TGGGGGTGGTCCATATCGCTGCATGGCAATCAGCCATaGGGGAGGGACCTTGTGGGCATTTGGTCCTACTGG +
Preference number: 6 (lower is better)
Translates to: WGWSISLHGNQP*GRDLVGIWSYW
Trigger: CCAGTAGGACCAAATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 72 bp GGTTGGGATACGATGGGGGTGGTCCATATCGCTGCATaGCAATCAGCCATGGGGGAGGGACCTTGTGGGCAT +
Preference number: 6 (lower is better)
Translates to: GWDTMGVVHIAA*QSAMGEGPCGH
Trigger: ATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 72 bp TCTAGCCCAAAGGAAGGCTCTTCTGCTCCCTGTAACTaGAGAGCCCAGGGCAGGTCATCTGAGGCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSPKEGSSAPCN*RAQGRSSEAEG
Trigger: GCCCTCAGCCTCAGATGACCTGCCCTGGGCTCTCCAGTTACAGGGAGCAGAAGAGCCTTCCTTTGGGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS CAA 72 bp ATGTCTTGTGGGGGCCGAGGGACTGGGGTGCCCATCTaGGCAATCTCCTGCTGTCGTTCCTGCTCCAGTAAC +
Preference number: 6 (lower is better)
Translates to: MSCGGRGTGVPI*AISCCRSCSSN
Trigger: GTTACTGGAGCAGGAACGACAGCAGGAGATTGCCAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000524627.5
ENST00000528302.5
ENST00000530322.5
ENST00000533595.5
CDS GCA 72 bp TTCAGGTTGGGATACGATGGGGGTGGTCCATATCGCTaGATGGCAATCAGCCATGGGGGAGGGACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: FRLGYDGGGPYR*MAISHGGGTLW
Trigger: CCACAAGGTCCCTCCCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 72 bp ACGGACACTGTGTCCTCCTCAGTCTCTGACGCTGACTaGCCCAGGGACGAGCGAGCATCTGTTTCCATTTCC +
Preference number: 6 (lower is better)
Translates to: TDTVSSSVSDAD*PRDERASVSIS
Trigger: GGAAATGGAAACAGATGCTCGCTCGTCCCTGGGCCAGTCAGCGTCAGAGACTGAGGAGGACACAGTGTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000525207.1
ENST00000528302.5
ENST00000530322.5
ENST00000533595.5
CDS CCA 72 bp GCCCTGCAGGTATTTGCGCTTAAAACACCAGTGGCGTaGCACAGGCACAGAGTTCCGAGTGGCCTTGAGGTG +
Preference number: 6 (lower is better)
Translates to: ALQVFALKTPVA*HRHRVPSGLEV
Trigger: CACCTCAAGGCCACTCGGAACTCTGTGCCTGTGCCACGCCACTGGTGTTTTAAGCGCAAATACCTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS CCA 72 bp CAGCCCAGGGATTTTCAGGTTGGGATACGATGGGGGTaGTCCATATCGCTGCATGGCAATCAGCCATGGGGG +
Preference number: 6 (lower is better)
Translates to: QPRDFQVGIRWG*SISLHGNQPWG
Trigger: CCCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 72 bp CAGGGATGGGCGAGTTCAGCCCAGGGATTTTCAGGTTaGGATACGATGGGGGTGGTCCATATCGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: QGWASSAQGFSG*DTMGVVHIAAW
Trigger: CCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCGCCCATCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 72 bp CACGTCCCCATAGAGCGGTTTCCCAGTCTCATCCACTaGAGGTTTGCCCCAGCCACCAGCATGGTACCCAAA +
Preference number: 6 (lower is better)
Translates to: HVPIERFPSLIH*RFAPATSMVPK
Trigger: TTTGGGTACCATGCTGGTGGCTGGGGCAAACCTCCAGTGGATGAGACTGGGAAACCGCTCTATGGGGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CAA 90 bp GAACAGCTCTCAGGGATGGGCGAGTTCAGCCCAGGGATTTTCAGGTaGGGATACGATGGGGGTGGTCCATATCGCTGCATGGCAATCAGC +
Preference number: 6 (lower is better)
Translates to: EQLSGMGEFSPGIFR*GYDGGGPYRCMAIS
Trigger: GCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCGCCCATCCCTGAGAGCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CAA 90 bp GGCAGCGTGCTCAGCCACCATGTCACTGAAGTCCTCCTTCTCTACTaGAGCCTGCTGCTCCCGCACATGCTCCTCATACTTCTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: GSVLSHHVTEVLLLY*SLLLPHMLLILLGH
Trigger: ATGACCCAGAAGTATGAGGAGCATGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS TCA 72 bp GCTTCTGTTTGGCAGCGTGCTCAGCCACCATGTCACTaGAGTCCTCCTTCTCTACTTGAGCCTGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: ASVWQRAQPPCH*SPPSLLEPAAP
Trigger: GGGAGCAGCAGGCTCAAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS TCA 72 bp CCTTCTGTTTGGCAGCGTGCTCAGCCACCATGTCACTaGAGTCCTCCTTCTCTACTTGAGCCTGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: PSVWQRAQPPCH*SPPSLLEPAAP
Trigger: GGGAGCAGCAGGCTCAAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTGAGCACGCTGCCAAACAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS GCA 72 bp CCCTTCAACTGCCCCAGCATACCACACCTGAGAGTTTaGAGGCCACAGAACAGAGGGGAGACTCATGGAGAG +
Preference number: 6 (lower is better)
Translates to: PFNCPSIPHLRV*RPQNRGETHGE
Trigger: CTCTCCATGAGTCTCCCCTCTGTTCTGTGGCCTGCAAACTCTCAGGTGTGGTATGCTGGGGCAGTTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp TCAGCTGCAGGATCTTCTCCAAAGCCTGGGGGATCTTaGGGCCCACAGAGGGGTCATCCATCTCTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SAAGSSPKPGGS*GPQRGHPSLCS
Trigger: AGAACAGAGAGATGGATGACCCCTCTGTGGGCCCCAAGATCCCCCAGGCTTTGGAGAAGATCCTGCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322535.11
ENST00000525207.1
ENST00000528302.5
ENST00000530322.5
ENST00000533595.5
CDS CCA 72 bp CGTTTGCCCTGCAGGTATTTGCGCTTAAAACACCAGTaGCGTGGCACAGGCACAGAGTTCCGAGTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: RLPCRYLRLKHQ*RGTGTEFRVAL
Trigger: CAAGGCCACTCGGAACTCTGTGCCTGTGCCACGCCACTGGTGTTTTAAGCGCAAATACCTGCAGGGCAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS CCA 72 bp TGTTCTTCCTTCTCCTGCAGGGCCTCTCGCATCTCCTaGATGCCTGTGCGTTTGATGAAGTCTGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: CSSFSCRASRIS*MPVRLMKSGSS
Trigger: CGAGCTGCCAGACTTCATCAAACGCACAGGCATCCAGGAGATGCGAGAGGCCCTGCAGGAGAAGGAAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS CAA 72 bp TCAGGGATGGGCGAGTTCAGCCCAGGGATTTTCAGGTaGGGATACGATGGGGGTGGTCCATATCGCTGCATG +
Preference number: 6 (lower is better)
Translates to: SGMGEFSPGIFR*GYDGGGPYRCM
Trigger: CATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCGCCCATCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CAA 72 bp GCCCTTCAACTGCCCCAGCATACCACACCTGAGAGTTaGCAGGCCACAGAACAGAGGGGAGACTCATGGAGA +
Preference number: 6 (lower is better)
Translates to: ALQLPQHTTPES*QATEQRGDSWR
Trigger: TCTCCATGAGTCTCCCCTCTGTTCTGTGGCCTGCAAACTCTCAGGTGTGGTATGCTGGGGCAGTTGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CAA 90 bp GGGAAAGGCGCTGAATCTGAATTCTCTTCGAGCTCCCTCTCAGACTaGGCTGAGTTCCTCCCCCTCATCGTCCTTAAAGAGGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: GKGAESEFSSSSLSD*AEFLPLIVLKEGSP
Trigger: TGGGCTGCCCTCTTTAAGGACGATGAGGGGGAGGAACTCAGCCAAGTCTGAGAGGGAGCTCGAAGAGAATTCAGATTCAGCGCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 72 bp CAGAGGGGAGACTCATGGAGAGCCCTGAGGACTCCGTaGGTTGGGAGGATGAAACTGAAAGTCCAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: QRGDSWRALRTP*VGRMKLKVQGD
Trigger: ATCTCCCTGGACTTTCAGTTTCATCCTCCCAACTCACGGAGTCCTCAGGGCTCTCCATGAGTCTCCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 72 bp CTCCAACAGTGGCTGTTCTCTTCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCACCGTCCATCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LQQWLFSSLATQ*RAEVSHRPSPP
Trigger: AGGAGGCGATGGACGGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCACTGTTGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530981.1
CDS CCA 72 bp CGAGTTCAGCCCAGGGATTTTCAGGTTGGGATACGATaGGGGTGGTCCATATCGCTGCATGGCAATCAGCCA +
Preference number: 6 (lower is better)
Translates to: RVQPRDFQVGIR*GWSISLHGNQP
Trigger: TGGCTGATTGCCATGCAGCGATATGGACCACCCCCATCGTATCCCAACCTGAAAATCCCTGGGCTGAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS CCA 72 bp GGGAGACTCATGGAGAGCCCTGAGGACTCCGTGAGTTaGGAGGATGAAACTGAAAGTCCAGGGAGATCAAGG +
Preference number: 6 (lower is better)
Translates to: GRLMESPEDSVS*EDETESPGRSR
Trigger: CCTTGATCTCCCTGGACTTTCAGTTTCATCCTCCCAACTCACGGAGTCCTCAGGGCTCTCCATGAGTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp AACAAAAGATACAGGTGGCACCTCCACTCAGCGCCTTaGAGAGCTTCTGAGCTCCCCAAGGATGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: NKRYRWHLHSAP*RASELPKDAAS
Trigger: AGAGGCTGCATCCTTGGGGAGCTCAGAAGCTCTCCAAGGCGCTGAGTGGAGGTGCCACCTGTATCTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CAA 90 bp GCCACAGTGAAGCGGTTCATTCGGCGCAACTTCTTCTTGGACAGCTaGGGGGCTTCTGGCTTCTTTTCCTGCTCGTCATCACTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ATVKRFIRRNFFLDS*GASGFFSCSSSLLS
Trigger: TGACAGCAGTGATGACGAGCAGGAAAAGAAGCCAGAAGCCCCCAAGCTGTCCAAGAAGAAGTTGCGCCGAATGAACCGCTTCACTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS TCA 72 bp CTCCAACAGTGGCTGTTCTCTTCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCACTTCCGTCCATCGCCT +
Preference number: 6 (lower is better)
Translates to: LQQWLFSSLATQ*RAEVSHFRPSP
Trigger: AGGCGATGGACGGAAGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCACTGTTGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS TCA 72 bp TCAGCCACCATGTCACTGAAGTCCTCCTTCTCTACTTaGGCCTGCTGCTCCCGCACATGCTCCTCATACTTC +
Preference number: 6 (lower is better)
Translates to: SATMSLKSSFST*ACCSRTCSSYF
Trigger: GAAGTATGAGGAGCATGTGCGGGAGCAGCAGGCTCAAGTAGAGAAGGAGGACTTCAGTGACATGGTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS TCA 72 bp CTCGCATCGCCTGGCGTTCAAGAGGCGCCCAATAAATaGTTAATCCTAGCACTGGGTGGGAAGTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: LASPGVQEAPNK*LILALGGKSSS
Trigger: GGAAGAGGACTTCCCACCCAGTGCTAGGATTAATCATTTATTGGGCGCCTCTTGAACGCCAGGCGATGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS TCA 72 bp GTGGCTGTTCTCTTCTCTGGCAACACAGTGAAGAGCTaGGGTGTCTCACCGTCCATCGCCTCCTCAATCTTC +
Preference number: 6 (lower is better)
Translates to: VAVLFSGNTVKS*GVSPSIASSIF
Trigger: GAAGATTGAGGAGGCGATGGACGGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530981.1
CDS GCA 72 bp TTTCCCCTTTCCATCAATATCACTATGGGAGGCTCCTaGAGCCACACTCCCAGAGGAGAAGCCAAACCCGGA +
Preference number: 6 (lower is better)
Translates to: FPLSINITMGGS*SHTPRGEAKPG
Trigger: TCCGGGTTTGGCTTCTCCTCTGGGAGTGTGGCTGCAGGAGCCTCCCATAGTGATATTGATGGAAAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS CCA 72 bp CCCCTCATAGTACAGGTCCCCATGGATGGTCAGCTTTaGCTTGGTCTGCCACTTGAAGAAGGCATCATGCAG +
Preference number: 6 (lower is better)
Translates to: PLIVQVPMDGQL*LGLPLEEGIMQ
Trigger: CTGCATGATGCCTTCTTCAAGTGGCAGACCAAGCCAAAGCTGACCATCCATGGGGACCTGTACTATGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322535.11
ENST00000528302.5
CDS CCA 72 bp AGGAGGCCATCTCATGAAGTAGCTGCGAAGGGGCCTTaGAGTCAGACTCCAAAGTTCTGCCACTCACAAGCT +
Preference number: 6 (lower is better)
Translates to: RRPSHEVAAKGP*SQTPKFCHSQA
Trigger: AGCTTGTGAGTGGCAGAACTTTGGAGTCTGACTCCAAGGCCCCTTCGCAGCTACTTCATGAGATGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529994.1
CDS TCA 72 bp CCATCGCCTCCTCAATCTTCTTCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATTCCAGCAGGCACTGATG +
Preference number: 6 (lower is better)
Translates to: PSPPQSSSSSAQ*VQGSPFQQALM
Trigger: CATCAGTGCCTGCTGGAATGGAGACCCCTGAACTCATTGAGCTGAGGAAGAAGAAGATTGAGGAGGCGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
CDS TCA 72 bp CCGGCTCATAACCGTGGACATGTCATAAATGTGGGTTaGTCCCATCATGGCCCCTCCAACAGTGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: PAHNRGHVINVG*SHHGPSNSGCS
Trigger: AGAACAGCCACTGTTGGAGGGGCCATGATGGGATCAACCCACATTTATGACATGTCCACGGTTATGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS GCA 72 bp GGTCCTCAAGTATGCAGGGGAGTACTAAGCAGCACATaGCTACCAAGGACAGGGAAAGAAGCACCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: GPQVCRGVLSST*LPRTGKEAPKR
Trigger: CCTTTTGGGTGCTTCTTTCCCTGTCCTTGGTAGGCATGTGCTGCTTAGTACTCCCCTGCATACTTGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS GCA 72 bp GAACAAGAGCAAATCTACCACTATCACCCCAGACTATaGCCATCATCTCCACCTCTCCCGCTGGAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: EQEQIYHYHPRL*PSSPPLPLEEV
Trigger: CACCTCTTCCAGCGGGAGAGGTGGAGATGATGGGCATAGTCTGGGGTGATAGTGGTAGATTTGCTCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp CCGTGGACATGTCATAAATGTGGGTTGATCCCATCATaGCCCCTCCAACAGTGGCTGTTCTCTTCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: PWTCHKCGLIPS*PLQQWLFSSLA
Trigger: TGCCAGAGAAGAGAACAGCCACTGTTGGAGGGGCCATGATGGGATCAACCCACATTTATGACATGTCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000530981.1
ENST00000534765.1
CDS CCA 72 bp AAAAGGGTCTCCAGAAGCGGAAACAAAAGATACAGGTaGCACCTCCACTCAGCGCCTTGGAGAGCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: KRVSRSGNKRYR*HLHSAPWRASE
Trigger: CTCAGAAGCTCTCCAAGGCGCTGAGTGGAGGTGCCACCTGTATCTTTTGTTTCCGCTTCTGGAGACCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp AAAACGTACCCAGTGCCTGTCTGCCAGCGCTCTGGCTaGGCACTGAAGAGGACCAAGATGGATACAAGAAAT +
Preference number: 6 (lower is better)
Translates to: KTYPVPVCQRSG*ALKRTKMDTRN
Trigger: ATTTCTTGTATCCATCTTGGTCCTCTTCAGTGCCCAGCCAGAGCGCTGGCAGACAGGCACTGGGTACGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS CAA 90 bp TTGAGTTCAGCCACAGTGAAGCGGTTCATTCGGCGCAACTTCTTCTaGGACAGCTTGGGGGCTTCTGGCTTCTTTTCCTGCTCGTCATCA +
Preference number: 6 (lower is better)
Translates to: LSSATVKRFIRRNFF*DSLGASGFFSCSSS
Trigger: TGATGACGAGCAGGAAAAGAAGCCAGAAGCCCCCAAGCTGTCCAAGAAGAAGTTGCGCCGAATGAACCGCTTCACTGTGGCTGAACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS TCA 72 bp CTCGCATCGCCTGGCGTTCAAGAGGCGCCCAATAAATaGTTACTTTCTAGCCCAAAGGAAGGCTCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LASPGVQEAPNK*LLSSPKEGSSA
Trigger: AGCAGAAGAGCCTTCCTTTGGGCTAGAAAGTAATCATTTATTGGGCGCCTCTTGAACGCCAGGCGATGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS TCA 72 bp CTCCAACAGTGGCTGTTCTCTTCTCTGGCAACACAGTaGAGAGCTGAGGTGTCTCACTTCTGCGAAGGACAA +
Preference number: 6 (lower is better)
Translates to: LQQWLFSSLATQ*RAEVSHFCEGQ
Trigger: TTGTCCTTCGCAGAAGTGAGACACCTCAGCTCTTCACTGTGTTGCCAGAGAAGAGAACAGCCACTGTTGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 72 bp AAGCCTCCGCCTTGCTGTGCCGAGATAAAGAAAGAATaGAGACCGAGCCGTGATGGGGTATATAAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: KPPPCCAEIKKE*RPSRDGVYKVS
Trigger: GGAGACCTTATATACCCCATCACGGCTCGGTCTTCATTCTTTCTTTATCTCGGCACAGCAAGGCGGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS GCA 72 bp TGGGGGCTTCTGGCTTCTTTTCCTGCTCGTCATCACTaGTGTCATCATCACTGTCCTTGTGCTCCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: WGLLASFPARHH*CHHHCPCAPLQ
Trigger: TTGAAGAGGAGCACAAGGACAGTGATGATGACAGCAGTGATGACGAGCAGGAAAAGAAGCCAGAAGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322535.11
ENST00000528302.5
ENST00000529994.1
CDS CAA 72 bp GCGCCTCACCTCTATCCCAAAAATGTGAGCAGGGACTaGATCATTTTCAGTCTCGCATCGCCTGGCGTTCAA +
Preference number: 6 (lower is better)
Translates to: APHLYPKNVSRD*IIFSLASPGVQ
Trigger: TTGAACGCCAGGCGATGCGAGACTGAAAATGATCAAGTCCCTGCTCACATTTTTGGGATAGAGGTGAGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534307.1
CDS TCA 72 bp TATGCCCATCATCTCCACCTCTCCCGCTGGAAGAGGTaGCAATCTATTGTCCACACAGGAGCCAGAGAAAAT +
Preference number: 6 (lower is better)
Translates to: YAHHLHLSRWKR*QSIVHTGAREN
Trigger: ATTTTCTCTGGCTCCTGTGTGGACAATAGATTGTCACCTCTTCCAGCGGGAGAGGTGGAGATGATGGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp AGGCGACAACAGTTCCCACCCGAAGAATGTCATGCCTaGAGTTCTCATGTATGTAATTCACACTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RRQQFPPEECHA*SSHVCNSHFQA
Trigger: GGCCTGGAAGTGTGAATTACATACATGAGAACTCCAGGCATGACATTCTTCGGGTGGGAACTGTTGTCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CCA 72 bp TCCTCCCCCTCATCGTCCTTAAAGAGGGCAGCCCACTaGAGGATTTCTAAGACTTCCAAATCTAAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: SSPSSSLKRAAH*RISKTSKSKEA
Trigger: TGCTTCCTTAGATTTGGAAGTCTTAGAAATCCTCCAGTGGGCTGCCCTCTTTAAGGACGATGAGGGGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CAA 72 bp AGCCGATGCCTCTATCCCAAAAATGTGAGCAGGGACTaGATCATTTTCAGTCTCGCATCGCCTGGCGTTCAA +
Preference number: 6 (lower is better)
Translates to: SRCLYPKNVSRD*IIFSLASPGVQ
Trigger: TTGAACGCCAGGCGATGCGAGACTGAAAATGATCAAGTCCCTGCTCACATTTTTGGGATAGAGGCATCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529577.5
CDS GCA 72 bp GGGAAAGAAGCACCCAAAAGGATTCATAACAGCAACTaGTGCTCACTCAGAACTGGGAATAGAGTAACTCCC +
Preference number: 6 (lower is better)
Translates to: GKEAPKRIHNSN*CSLRTGNRVTP
Trigger: GGGAGTTACTCTATTCCCAGTTCTGAGTGAGCAGCAGTTGCTGTTATGAATCCTTTTGGGTGCTTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS CAA 90 bp TCCTCACTATACTCTGTCCACAGTACCCTTCTTTATTTTTCTTCCTaGAATATGCAAAGCTTGAGACTTCTGCTTCCTGACAAGGAGCAA +
Preference number: 6 (lower is better)
Translates to: SSLYSVHSTLLYFSS*NMQSLRLLLPDKEQ
Trigger: TTGCTCCTTGTCAGGAAGCAGAAGTCTCAAGCTTTGCATATTCAAGGAAGAAAAATAAAGAAGGGTACTGTGGACAGAGTATAGTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534765.1
CDS TCA 72 bp TCACACATGCACGTGAACACCCAATCATCATGCTCATaGACTACAAAAGGATCAGCAGATGGAATCTTAAAA +
Preference number: 6 (lower is better)
Translates to: SHMHVNTQSSCS*TTKGSADGILK
Trigger: TTTTAAGATTCCATCTGCTGATCCTTTTGTAGTTCATGAGCATGATGATTGGGTGTTCACGTGCATGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531041.1
CDS CAA 90 bp AAATTGGCACAAAATAGAAGCTATTACTTACTGAACACTTACAAATaGTGTTATTTCCGTACCCAAGTCCCATCTCCTGGCTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: KLAQNRSYYLLNTYK*CYFRTQVPSPGFPS
Trigger: GGAAGGAAAGCCAGGAGATGGGACTTGGGTACGGAAATAACACAATTTGTAAGTGTTCAGTAAGTAATAGCTTCTATTTTGTGCCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525207.1