RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SF3B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115524

Ensembl transcript IDs: ENST00000335508.11, ENST00000409915.8, ENST00000414174.1, ENST00000414963.2, ENST00000462613.1, ENST00000470268.2, ENST00000487698.5, ENST00000496458.1, ENST00000652026.1, ENST00000652738.1

Found 944 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: TSTGSCASMAWCRMA*CITSSRSSSSRWCV
Trigger: CACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp TGGAGCACCAAGCCACCTCCAGCACTCCTGCCCGAGCTGCCAACATaGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTC +
Preference number: 1 (lower is better)
Translates to: WSTKPPPALLPELPT*LPTVTRCSEDQCGV
Trigger: GACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTGCTGGAGGTGGCTTGGTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp AAGACCAGCATCCCAAGTGGAGCACCAAGCCACCTCCAGCACTCCTaGCCGAGCTGCCAACATGGCTCCCAACTGTCACAAGATGCTCTG +
Preference number: 1 (lower is better)
Translates to: KTSIPSGAPSHLQHS*PSCQHGSQLSQDAL
Trigger: CAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTGCTGGAGGTGGCTTGGTGCTCCACTTGGGATGCTGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp TTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGT +
Preference number: 1 (lower is better)
Translates to: FLRALEVAPPWPGVA*PGVSPRPGVAAPAG
Trigger: ACCAGCGGGAGCTGCTACTCCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 90 bp AGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTGCACGACC +
Preference number: 1 (lower is better)
Translates to: SSSRWCVARCRIPYF*AWGCSRSLASLCTT
Trigger: GGTCGTGCAAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTACACCTAGCCACACACCAGCGGGAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp ATCCCAAGTGGAGCACCAAGCCACCTCCAGCACTCCTGCCCGAGCTaGCAACATGGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGT +
Preference number: 1 (lower is better)
Translates to: IPSGAPSHLQHSCPS*QHGSQLSQDALRIS
Trigger: ACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTGCTGGAGGTGGCTTGGTGCTCCACTTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp CCTGGTGTATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCA +
Preference number: 1 (lower is better)
Translates to: PGVSPRPGVAAPAGV*LGVGSHIFEPGVAP
Trigger: TGGAGCAACCCCAGGCTCAAAAATATGGGATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGATACACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp ATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTaGTGTCGCATGGCCTGGTGTATCACCTCGTCCAGGAGTAGCAGC +
Preference number: 1 (lower is better)
Translates to: IPSVFTSTGSCASMA*CRMAWCITSSRSSS
Trigger: GCTGCTACTCCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp GTGACCTGGAGTAGGGGTAGCCATGTTCATGGCTGGTGTGCCAATTaGTGTCTTTCCAGGGGTCAGAACTGGAGTGCTTCCACCCATCTG +
Preference number: 1 (lower is better)
Translates to: VTWSRGSHVHGWCAN*CLSRGQNWSASTHL
Trigger: CAGATGGGTGGAAGCACTCCAGTTCTGACCCCTGGAAAGACACCAATTGGCACACCAGCCATGAACATGGCTACCCCTACTCCAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp GCACTCCTGCCCGAGCTGCCAACATGGCTCCCAACTGTCACAAGATaGTCTGAGGATCAGTGCGGGGTCATCTTACACATTTTCACAGCT +
Preference number: 1 (lower is better)
Translates to: ALLPELPTWLPTVTR*SEDQCGVILHIFTA
Trigger: AGCTGTGAAAATGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp GTTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATaGCCTGGTGTCGCATGGCCTGGTGTATCACCTCGTCCAGGAGTA +
Preference number: 1 (lower is better)
Translates to: VSSHLFLRALEVAPP*PGVAWPGVSPRPGV
Trigger: TACTCCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp GTTCATGGCTGGTGTGCCAATTGGTGTCTTTCCAGGGGTCAGAACTaGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTCATCCCACCG +
Preference number: 1 (lower is better)
Translates to: VHGWCANWCLSRGQN*SASTHLTSWCFIPP
Trigger: CGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACCCCTGGAAAGACACCAATTGGCACACCAGCCATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 90 bp CCTGCCCGAGCTGCCAACATGGCTCCCAACTGTCACAAGATGCTCTaGGGATCAGTGCGGGGTCATCTTACACATTTTCACAGCTTACTC +
Preference number: 1 (lower is better)
Translates to: PARAANMAPNCHKML*GSVRGHLTHFHSLL
Trigger: GAGTAAGCTGTGAAAATGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp GTACCATATAACCCACCTATCGCCAGCTCACAGGTGAGAACACAATaGTTGAAGACCAGCATCCCAAGTGGAGCACCAAGCCACCTCCAG +
Preference number: 1 (lower is better)
Translates to: VPYNPPIASSQVRTQ*LKTSIPSGAPSHLQ
Trigger: CTGGAGGTGGCTTGGTGCTCCACTTGGGATGCTGGTCTTCAAGCATTGTGTTCTCACCTGTGAGCTGGCGATAGGTGGGTTATATGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp CATACTCATTATGTGACCTGGAGTAGGGGTAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTCTTTCCAGGGGTCAGAACTGGAGTGCT +
Preference number: 1 (lower is better)
Translates to: HTHYVTWSRGSHVHG*CANWCLSRGQNWSA
Trigger: AGCACTCCAGTTCTGACCCCTGGAAAGACACCAATTGGCACACCAGCCATGAACATGGCTACCCCTACTCCAGGTCACATAATGAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 90 bp CATAAGGAGTTGCTGCTTCAGCCAAGGCAGCAATGGCCAAAGCACTaGTGGTCCGAACTTTCTGCTGCTCATCCACAAGACCATGTTCAA +
Preference number: 1 (lower is better)
Translates to: HKELLLQPRQQWPKH*WSELSAAHPQDHVQ
Trigger: TTGAACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATACA +
Preference number: 1 (lower is better)
Translates to: PLLHYTVLKGRGQVS*TFASPAYKHSGWHT
Trigger: TGTATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp AGTCATACCACCCAAAGGTGTTGGAGTAGCTGTCAGCTTTCGAGCTaGAGTTCGAATAGGAACATAACCAGCTGGAGGAGGAAGTACCTT +
Preference number: 1 (lower is better)
Translates to: SHTTQRCWSSCQLSS*SSNRNITSWRRKYL
Trigger: AAGGTACTTCCTCCTCCAGCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGTATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 90 bp CAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCAAGTaGCATGTGCTGTACCACTGCACTAGCCGTCTGTCTGTGTACAAG +
Preference number: 1 (lower is better)
Translates to: QVIQRIFTTKSINPK*HVLYHCTSRLSVYK
Trigger: CTTGTACACAGACAGACGGCTAGTGCAGTGGTACAGCACATGTCACTTGGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp GCTGGCATCTCAATAGGTAGAGGTCAGGAACACTGCTCAAGATTCTaGAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATT +
Preference number: 1 (lower is better)
Translates to: AGISIGRGQEHCSRF*KAQDSTPTIMNYLI
Trigger: AATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCAGAATCTTGAGCAGTGTTCCTGACCTCTACCTATTGAGATGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp ATCTTCAGTTTGCATGTGGAAACCAGTCATACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCGAGCTGGAGTTCGAATAGGAACATA +
Preference number: 1 (lower is better)
Translates to: IFSLHVETSHTTQRC*SSCQLSSWSSNRNI
Trigger: TATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp GGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTaGAAACCAGTCATACCACCCAAAGGTGTTGGAGTAGCTGTCAGC +
Preference number: 1 (lower is better)
Translates to: GWSLTLFIVRSSVCM*KPVIPPKGVGVAVS
Trigger: GCTGACAGCTACTCCAACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp CCAGATGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTaGATGTGGAAACCAGTCATACCACCCAAAGGTGTTGGAGTAGCT +
Preference number: 1 (lower is better)
Translates to: PDGWSLTLFIVRSSV*MWKPVIPPKGVGVA
Trigger: AGCTACTCCAACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp TGGAGTCATCTTATGCATACCTATGACATTTACAATGGCCTTCAGTaGTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAA +
Preference number: 1 (lower is better)
Translates to: WSHLMHTYDIYNGLQ*SKNAAQYFRVLFTQ
Trigger: TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTAAATGTCATAGGTATGCATAAGATGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp AATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTC +
Preference number: 1 (lower is better)
Translates to: NYHGPPMLFVFIFPV*NLWRSVLSKWIILF
Trigger: GAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR TCA 90 bp ACTTCCTTTGGAATACTTTTTCACCATAATCTAGAGAGGATGTGTTaGACTGCACCCTTAAGAATGCAGACAGGACTGGCATATAGCAGT +
Preference number: 1 (lower is better)
Translates to: TSFGILFHHNLERMC*TAPLRMQTGLAYSS
Trigger: ACTGCTATATGCCAGTCCTGTCTGCATTCTTAAGGGTGCAGTTCAACACATCCTCTCTAGATTATGGTGAAAAAGTATTCCAAAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR TCA 90 bp GGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATATACATCTCTaGCTTTCCGGGCTGGGTGAAACAGACCCTGTAAACAATATTGCA +
Preference number: 1 (lower is better)
Translates to: GNQCRWSCKFSNIHL*LSGLGETDPVNNIA
Trigger: TGCAATATTGTTTACAGGGTCTGTTTCACCCAGCCCGGAAAGTCAGAGATGTATATTGGAAAATTTACAACTCCATCTACATTGGTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 90 bp TATAGGTGTTCTTATCATCGTTGTAGATTCTTGGGTAATGTGCTATaGGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCC +
Preference number: 1 (lower is better)
Translates to: YRCSYHRCRFLGNVL*ERPGNQCRWSCKFS
Trigger: GGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCACATTACCCAAGAATCTACAACGATGATAAGAACACCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp GTCTTCATGACAACAGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTaGCTAACTTTAGCAGATTTGTTATTTAAACGCCACAAAACTGTA +
Preference number: 1 (lower is better)
Translates to: VFMTTAVREIKSAAC*LTLADLLFKRHKTV
Trigger: TACAGTTTTGTGGCGTTTAAATAACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCTGTTGTCATGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp ACGAATATAGGTGTTCTTATCATCGTTGTAGATTCTTGGGTAATGTaGTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAAT +
Preference number: 1 (lower is better)
Translates to: TNIGVLIIVVDSWVM*YESVLGTNVDGVVN
Trigger: ATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCACATTACCCAAGAATCTACAACGATGATAAGAACACCTATATTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp AAGTTCATAACGAATATAGGTGTTCTTATCATCGTTGTAGATTCTTaGGTAATGTGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGA +
Preference number: 1 (lower is better)
Translates to: KFITNIGVLIIVVDS*VMCYESVLGTNVDG
Trigger: TCCATCTACATTGGTTCCCAGGACGCTCTCATAGCACATTACCCAAGAATCTACAACGATGATAAGAACACCTATATTCGTTATGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 90 bp ACAGAAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATaGTTTAGAAATGTGGTAACTAGCTATACAAGTAGTATAGCATCA +
Preference number: 1 (lower is better)
Translates to: TEAQTVYNKIHRGTL*FRNVVTSYTSSIAS
Trigger: TGATGCTATACTACTTGTATAGCTAGTTACCACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTTCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
3UTR CCA 90 bp AAGTTAAATTCCTCACTTGCTAAACACAGCAGACCTGTCAAGTGTTaGACAAGACTTAAACCACTTTCTTTAAATGTGTTCATAAAGCAT +
Preference number: 1 (lower is better)
Translates to: KLNSSLAKHSRPVKC*TRLKPLSLNVFIKH
Trigger: ATGCTTTATGAACACATTTAAAGAAAGTGGTTTAAGTCTTGTCCAACACTTGACAGGTCTGCTGTGTTTAGCAAGTGAGGAATTTAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAGCCTCCCTAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACATGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTWCRMA*CITSSR
Trigger: CCTGGACGAGGTGATACACCAGGCCATGCGACACCA...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTRGQVS*TFASPA
Trigger: TGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCT...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp CCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTaGCACGACCTGGTGTCTCATCCCATCTTAAGGAAGGAGTATGCC +
Preference number: 2 (lower is better)
Translates to: PIFLSLGLLQESRFP*HDLVSHPILRKEYA
Trigger: GGCATACTCCTTCCTTAAGATGGGATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAAACGCCGTTTTCGTTTTaGTGGAGGCTGGGACGCTGC +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQTPFSF*WRLGRC
Trigger: GCAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGT...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCTGGAGGCTGGGACGCTaGTGCTCCATTGACGACTTT +
Preference number: 2 (lower is better)
Translates to: SHPREILLSKGHETMSGGWRLGR*CSIDDF
Trigger: AAAGTCGTCAATGGAGCAGCAGCGTCCCAGCCTCCA...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAGCCCATCCACTTCCATaGCCAGGAGTATCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTAHPLP*PGVSLS
Trigger: AGAGAGAGATACTCCTGGGCATGGAAGTGGATGGGC...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGCCGTTCAACATTACTaGGTCCTCTGTAGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHAVQHY*VLCSLF
Trigger: GAACAGACTACAGAGGACTCAGTAATGTTGAACGGC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTGTTCATGGCTGGTGTaGCAATTGGTGTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHCSWLV*QLVSFQ
Trigger: CTGGAAAGACACCAATTGGCACACCAGCCATGAACA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCATGCGCCTCCATGGCCTaGTGTCGCATGGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLACASMA*CRMAWC
Trigger: ACACCAGGCCATGCGACACCAGGCCATGGAGGCGCA...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCG +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTTTQRC*SSCQLS
Trigger: CGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGT...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACATCTAGTGGTACTTGGTaGTCACAGGGCACTGTACAA +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTSSGTW*SQGTVQ
Trigger: TTGTACAGTGCCCTGTGAGCACCAAGTACCACTAGA...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGT +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFWPGVA*PGVSPR
Trigger: ACGAGGTGATACACCAGGCCATGCGACACCAGGCCA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAAACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCG +
Preference number: 2 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQTTQRC*SSCQLS
Trigger: CGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGT...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGCATGGAAGTACCGCTaGAAACTTCTAACAACAGAA +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHAWKYR*KLLTTE
Trigger: TTCTGTTGTTAGAAGTTTTCAGCGGTACTTCCATGC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTCCCACCGCCAAGCCTaGAGCTGTTCAGGAGTCATA +
Preference number: 2 (lower is better)
Translates to: REILLSKGHETMSGGIFGSHRQA*SCSGVI
Trigger: TATGACTCCTGAACAGCTTCAGGCTTGGCGGTGGGA...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAAGTCAGCTGCCTGTTaGCTAACTTTAGCAGATTTG +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHKSAAC*LTLADL
Trigger: CAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCAT +
Preference number: 2 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPAPAGV*LGVGSH
Trigger: ATGGGATCCTACACCTAGCCACACACCAGCGGGAGC...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCAT +
Preference number: 2 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLAAPAGV*LGVGSH
Trigger: ATGGGATCCTACACCTAGCCACACACCAGCGGGAGC...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp TCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTaGCATCCCCTGCATATAAGCACAGTGGCTGGCATACAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: SIILFLKVEGRSHAP*HPLHISTVAGIQWV
Trigger: CACCCACTGTATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCCTAGACATTTTAGCTaGTGCCACTGTGTATTATCA +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHPRHFS*CHCVLS
Trigger: TGATAATACACAGTGGCAGCAGCTAAAATGTCTAGG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTACGAGCACTGGAAGTTaGGCCTCCATGGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFTSTGS*ASMAWC
Trigger: ACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGT...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAAGCCTCCCTAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTSLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCT...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCCACACAGAAGCAACGTaGTGTACAAAGAGATGTGTC +
Preference number: 2 (lower is better)
Translates to: SHPREILLSKGHETMSGGHTEAT*CTKRCV
Trigger: GACACATCTCTTTGTACACCACGTTGCTTCTGTGTG...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGTAGCAGCTCCCGCTaGTGTGTGGCTAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSSSSR*CVARCR
Trigger: CCTACACCTAGCCACACACCAGCGGGAGCTGCTACT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAATGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKWCRMA*CITSSR
Trigger: CCTGGACGAGGTGATACACCAGGCCATGCGACACCA...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp GGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCTGCAATCTTTGGAGGTCTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: GSRRSGEIIMVRLCF*YSSSRSAIFGGLCS
Trigger: TGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATATTCTCAGTCATTACTaGAGGTCATTTGACATCAAC +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHILSHY*RSFDIN
Trigger: GTTGATGTCAAATGACCTTCAGTAATGACTGAGAAT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGGTGCTTCCACCCATCTaGCTAGCTGGTGTTTCATCC +
Preference number: 2 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMVLPPI*LAGVSS
Trigger: GGATGAAACACCAGCTAGTCAGATGGGTGGAAGCAC...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAAAGCAGAGGAAGAATCTaGTTAAACAAAGGACCAGCT +
Preference number: 2 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQSRGRI*LNKGPA
Trigger: AGCTGGTCCTTTGTTTAATCAGATTCTTCCTCTGCT...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCTCCATAAACCCCAAGTaGCATGTGCTGTACCACTGC +
Preference number: 2 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPSINPK*HVLYHC
Trigger: GCAGTGGTACAGCACATGTCACTTGGGGTTTATGGA...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCATGTCACAAGATGCTCTaGGGATCAGTGCGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLACHKML*GSVRGH
Trigger: ATGACCCCGCACTGATCCTCAGAGCATCTTGTGACA...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAAAACCTTTAACCCTTTaGGTTTCTATGGCATTGGCT +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTKPLTL*VSMALA
Trigger: AGCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTT...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAAGGACTTCTTGCTTTTaGACACAGCTTTTAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTRTSCF*TQLLRR
Trigger: CCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCT...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGTTCTTGGTCACTACTaGCATTTACTGTTTAACATC +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHVLGHY*HLLFNI
Trigger: GATGTTAAACAGTAAATGCCAGTAGTGACCAAGAAC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCGAAGTTGCGCCTCCATaGCCTGGTGTCGCATGGCCT +
Preference number: 2 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPEVAPP*PGVAWP
Trigger: AGGCCATGCGACACCAGGCCATGGAGGCGCAACTTC...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCGTGATTTTCTTTTACTaGCTCCAGGAGTCGGTGTTT +
Preference number: 2 (lower is better)
Translates to: SHPREILLSKGHETMSGGVIFFY*LQESVF
Trigger: AAACACCGACTCCTGGAGCCAGTAAAAGAAAATCAC...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCAGATCTTTAATTGGTaGAGTCATCTTATGCATACC +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHQIFNW*SHLMHT
Trigger: GGTATGCATAAGATGACTCCACCAATTAAAGATCTG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCGAATAGCCTTTTTGTaGGCTTTTAAGAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHRIAFL*AFKSSK
Trigger: TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp TCCTGCTTAAACAATGGTCTCAGTGGTTCTCACCCTAGGGAGATTTaGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGT +
Preference number: 2 (lower is better)
Translates to: SCLNNGLSGSHPREI*LSKGHETMSGGIFG
Trigger: ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGAACCACTGAGACCATTGTTTAAGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTAGCAAGTTTAAGGTGTaGAGTAGCTGTGCATTAAAC +
Preference number: 2 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFSKFKV*SSCALN
Trigger: GTTTAATGCACAGCTACTTCACACCTTAAACTTGCT...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCATGGTTGTGCTAGTTTaGGGGGAACATCCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGMVVLV*GEHPLR
Trigger: CCTCAGGGGATGTTCCCCTCAAACTAGCACAACCAT...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR TCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCTTACTGATGCATTGCTaGGTAGTGGCTTATAACATG +
Preference number: 2 (lower is better)
Translates to: SHPREILLSKGHETMSGGLLMHC*VVAYNM
Trigger: CATGTTATAAGCCACTACTCAGCAATGCATCAGTAA...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGAGAATATGGCATCTGTaGCTTCAACCACATCTATAC +
Preference number: 2 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVRIWHL*LQPHLY
Trigger: GTATAGATGTGGTTGAAGTCACAGATGCCATATTCT...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR TCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAACTTGACAAGTCTTCATaGCAACAGCAGTTCGAGAAA +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQLDKSS*QQQFEK
Trigger: TTTCTCGAACTGCTGTTGTCATGAAGACTTGTCAAG...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAACACAGAGGCACACTATaGTTTAGAAATGTGGTAACT +
Preference number: 2 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQHRGTL*FRNVVT
Trigger: AGTTACCACATTTCTAAAGCATAGTGTGCCTCTGTG...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTAGTCTCGCTTCCCTTTaGACGACCTGGTGTCTCATC +
Preference number: 2 (lower is better)
Translates to: LSISGLMVEIIVARPAAFSLASL*TTWCLI
Trigger: GATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACT...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTCAGTGCTCCAAGAATaGTGCCCAATACTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSVLQE*CPILQG
Trigger: ACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTACAATGGCCTTCAGTaGTCCAAGAATGCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFYNGLQ*SKNAAQ
Trigger: TTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAGGTGGAGTCATCTTATaGATACCTATGACATTTACA +
Preference number: 2 (lower is better)
Translates to: GSQLSQDALRISAGSSYTGGVIL*IPMTFT
Trigger: TGTAAATGTCATAGGTATGCATAAGATGACTCCACC...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTCATCTAGTGGTACTTaGTGCTCACAGGGCACTGTA +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSSSGT*CSQGTV
Trigger: TACAGTGCCCTGTGAGCACCAAGTACCACTAGATGA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGTCAGAACTGGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTCATCCCACCGGATGTGTCAGTCTCTTaGTTAAAGTTTCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: GQNWSASTHLTSWCFIPPDVSVS*LKFQYL
Trigger: CAAATACTGAAACTTTAACCAAGAGACTGACACATC...CGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCTCCTCATCAGGAGACTaGAATTCTCGAATAAGGATT +
Preference number: 2 (lower is better)
Translates to: SHPREILLSKGHETMSGGSSSGD*NSRIRI
Trigger: AATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGA...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp TGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTCTGTTGACT +
Preference number: 2 (lower is better)
Translates to: WSAYAFCIHLPGLQS*EVCAQQMDHTVLLT
Trigger: AGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR TCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGGGGAGCTCTAGTGTaGGAAACAGTTTCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMGGALV*ETVSQG
Trigger: CCCTTGAGAAACTGTTTCTCACACTAGAGCTCCCCC...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR-3UTR TCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAATTCTGGACTAAGTGTTaGTTCATCAACATCAACCAA +
Preference number: 2 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQFWTKC*FININQ
Trigger: TTGGTTGATGTTGATGAATCAACACTTAGTCCAGAA...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTGCTTTATCAGTAATCTaGCGCAATGCAGCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFALSVI*RNAAFL
Trigger: GAGAAAGGCTGCATTGCGTCAGATTACTGATAAAGC...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAAAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQRGQVS*TFASPA
Trigger: TGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCT...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAAAGACATTTTAGCTGCTaGCACTGTGTATTATCACAG +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQRHFSC*HCVLSQ
Trigger: CTGTGATAATACACAGTGGCAGCAGCTAAAATGTCT...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGTCATCTAGTGGTACTTaGTGCTCACAGGGCACTGTA +
Preference number: 2 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMSSSGT*CSQGTV
Trigger: TACAGTGCCCTGTGAGCACCAAGTACCACTAGATGA...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCTGCAATCTTTGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTCTGTTGACAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: SAIFGGLCSANGSYCSVDRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...GTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR CCA 90 bp GATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATCCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAA +
Preference number: 2 (lower is better)
Translates to: DQDALGKLSWSAYAFCIHPVCNL*RSVLSK
Trigger: TTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGG...ATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGT +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQWPGVA*PGVSPR
Trigger: ACGAGGTGATACACCAGGCCATGCGACACCAGGCCA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCTCCAGGGGTCAGAACTaGAGTGCTTCCACCCATCTG +
Preference number: 2 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPSRGQN*SASTHL
Trigger: CAGATGGGTGGAAGCACTCCAGTTCTGACCCCTGGA...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp ACAATCTTAATACCAGTGTGTCTCGCTTGCCAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAGGGCAATAAAGAAGGAATGCCCAGG +
Preference number: 2 (lower is better)
Translates to: TILIPVCLACQDFLL*HTAFKKGNKEGMPR
Trigger: CCTGGGCATTCCTTCTTTATTGCCCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGTATTAAGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTGCTACTTTTCTACGATaGTGGAATGGTTGTGCTAGT +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFATFLR*WNGCAS
Trigger: ACTAGCACAACCATTCCATCATCGTAGAAAAGTAGC...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAAATTCTCAGTCATTACTaGAGGTCATTTGACATCAAC +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQILSHY*RSFDIN
Trigger: GTTGATGTCAAATGACCTTCAGTAATGACTGAGAAT...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCGTTAGTATGGGCCTGTaGATTCTGGCATACATGTTT +
Preference number: 2 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPVSMGL*ILAYMF
Trigger: AAACATGTATGCCAGAATTCACAGGCCCATACTAAC...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR TCA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATACCAGGGGTCTCTGCCTaGTCCCAACTTGATAGTTTT +
Preference number: 2 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIPGVSA*SQLDSF
Trigger: AAAACTATCAAGTTGGGATCAGGCAGAGACCCCTGG...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATCCCACCGCCAAGCCTaGAGCTGTTCAGGAGTCATA +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSHRQA*SCSGVI
Trigger: TATGACTCCTGAACAGCTTCAGGCTTGGCGGTGGGA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGAGCAGAGGAAGAATCTaGTTAAACAAAGGACCAGCT +
Preference number: 2 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLSRGRI*LNKGPA
Trigger: AGCTGGTCCTTTGTTTAATCAGATTCTTCCTCTGCT...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQRGQVS*TFASPA
Trigger: TGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGTCCTTTGCTCCACAATaGCACTACAAAGCCTATTTT +
Preference number: 2 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQSFAPQ*HYKAYF
Trigger: AAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGA...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCTTTCCCTCACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 2 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVFPSLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAA...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp ATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 2 (lower is better)
Translates to: ICKRIKTLWGNYHGPPMLIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...AAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR GCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGGAGGATGTGTTGAACTaGACCCTTAAGAATGCAGAC +
Preference number: 2 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMEDVLN*TLKNAD
Trigger: GTCTGCATTCTTAAGGGTGCAGTTCAACACATCCTC...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR GCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAATTTTCTGCTAGCTGTTaGCTAATTTCTCGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQFSASC*LISRSS
Trigger: AGAAGAACGAGAAATTAGGCAACAGCTAGCAGAAAA...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAGCCCATCCACTTCCATaGCCAGGAGTATCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTAHPLP*PGVSLS
Trigger: AGAGAGAGATACTCCTGGGCATGGAAGTGGATGGGC...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TCTGCTGCACCTACTTTGTTTGCCAACTCCACAGTAGTATCAACTAACTGTCGGACCACGAGGATCTTATaGACATATGGACGAACTAAG +
Preference number: 2 (lower is better)
Translates to: SAAPTLFANSTVVSTNCRTTRIL*TYGRTK
Trigger: CTTAGTTCGTCCATATGTGCATAAGATCCTCGTGGT...CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAATGTTTTAATGTAGTTTaGTTCTACACCATCTGTCCC +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQCFNVV*FYTICP
Trigger: GGGACAGATGGTGTAGAAGCAAACTACATTAAAACA...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAATGGGCCTGTGAATTCTaGCATACATGTTTAAATCAA +
Preference number: 2 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQWACEF*HTCLNQ
Trigger: TTGATTTAAACATGTATGCCAGAATTCACAGGCCCA...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR CCA 90 bp TCTGCTGCACCTACTTTGTTTGCCAACTCCACAGTAGTATCAACTAACTGTCGGTATCTCTCTCTGTTTTaGGGGTTTCATCCCATCTGT +
Preference number: 2 (lower is better)
Translates to: SAAPTLFANSTVVSTNCRYLSLF*GFHPIC
Trigger: ACAGATGGGATGAAACCCCCAAAACAGAGAGAGATA...CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTAGGCTGGTGTGCCAATTaGTGTCTTTCCAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: ISSSGDWNSRIRINITSLGWCAN*CLSRGQ
Trigger: CTGACCCCTGGAAAGACACCAATTGGCACACCAGCC...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCAGCCTTTCTCATTGGTaGTGTTCCATTCTTAATTTT +
Preference number: 2 (lower is better)
Translates to: SHPREILLSKGHETMSGGSLSHW*CSILNF
Trigger: AAAATTAAGAATGGAACACCACCAATGAGAAAGGCT...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp TCTAAGATGTGGCAAGATGGCACAGCCCATAAGAATAGCTATCTGTaGTACAATCTTAATACCAGTGTGTCTCGCTTGCCAGGACTTCTT +
Preference number: 2 (lower is better)
Translates to: SKMWQDGTAHKNSYL*YNLNTSVSRLPGLL
Trigger: AAGAAGTCCTGGCAAGCGAGACACACTGGTATTAAGATTGTACAACAGATAGCTATTCTTATGGGCTGTGCCATCTTGCCACATCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCATGGTTGTGCTAGTTTaGGGGGAACATCCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFMVVLV*GEHPLR
Trigger: CCTCAGGGGATGTTCCCCTCAAACTAGCACAACCAT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCAACCATAGAGAGCAGTaGGATTTAAAGTTGCATGGA +
Preference number: 2 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPNHREQ*DLKLHG
Trigger: TCCATGCAACTTTAAATCTCACTGCTCTCTATGGTT...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTTCTACCAGTTATTATaGTGCACACAGAAGCAACGT +
Preference number: 2 (lower is better)
Translates to: REILLSKGHETMSGGIFGFYQLL*CTQKQR
Trigger: ACGTTGCTTCTGTGTGCATCATAATAACTGGTAGAA...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQRIPYF*AWGCSR
Trigger: CCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFRIPYF*AWGCSR
Trigger: CCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATGGAGGCTGGGACGCTaGTGCTCCATTGACGACTTT +
Preference number: 2 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEWRLGR*CSIDDF
Trigger: AAAGTCGTCAATGGAGCAGCAGCGTCCCAGCCTCCA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCACCACGAGGATCTTATaGACATATGGACGAACTAAG +
Preference number: 2 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPTTRIL*TYGRTK
Trigger: CTTAGTTCGTCCATATGTGCATAAGATCCTCGTGGT...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGCAGACCAGCAGCCTTTaGCAAATTAGAAATGATCTC +
Preference number: 2 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMQTSSL*QIRNDL
Trigger: GAGATCATTTCTAATTTGGCAAAGGCTGCTGGTCTG...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACCCAGTGTGTCTCGCTTaGCAGGACTTCTTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDPVCLA*QDFLLL
Trigger: CAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGG...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTCCTGGATATAATTTCTaGTGCACCTACTTTGTTTGC +
Preference number: 2 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFPGYNF*CTYFVC
Trigger: GCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGG...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGAAGTCAGCTGCCTGTTaGCTAACTTTAGCAGATTTG +
Preference number: 2 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMKSAAC*LTLADL
Trigger: CAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTT...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCCACACAGAAGCAACGTaGTGTACAAAGAGATGTGTC +
Preference number: 2 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVHTEAT*CTKRCV
Trigger: GACACATCTCTTTGTACACCACGTTGCTTCTGTGTG...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAGGGGGAGCTCTAGTGTaGGAAACAGTTTCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEGGALV*ETVSQG
Trigger: CCCTTGAGAAACTGTTTCTCACACTAGAGCTCCCCC...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR GCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTCAGACCAGCAGCCTTTaGCAAATTAGAAATGATCTC +
Preference number: 2 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVQTSSL*QIRNDL
Trigger: GAGATCATTTCTAATTTGGCAAAGGCTGCTGGTCTG...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTCTTGGTCACTACTaGCATTTACTGTTTAACATC +
Preference number: 2 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLVLGHY*HLLFNI
Trigger: GATGTTAAACAGTAAATGCCAGTAGTGACCAAGAAC...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTCATCTAGTGGTACTTaGTGCTCACAGGGCACTGTA +
Preference number: 2 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDSSSGT*CSQGTV
Trigger: TACAGTGCCCTGTGAGCACCAAGTACCACTAGATGA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATGTTTTTACGAGCACTaGAAGTTGCGCCTCCATGGC +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQCFYEH*KLRLHG
Trigger: GCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATAACTCATTATGTGACCTaGAGTAGGGGTAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: CYESVLGTNVDGVVNFPITHYVT*SRGSHV
Trigger: AACATGGCTACCCCTACTCCAGGTCACATAATGAGT...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCATTCCTCATCAGAAAGTaGGCGATTTCTCTCATCAAT +
Preference number: 2 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLAFLIRK*AISLIN
Trigger: ATTGATGAGAGAAATCGCCCACTTTCTGATGAGGAA...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTAGGAACATAACCAGCTaGAGGAGGAAGTACCTTATA +
Preference number: 2 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFRNITS*RRKYLI
Trigger: TATAAGGTACTTCCTCCTCCAGCTGGTTATGTTCCT...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGTTGCAACATTCTACATaGTCCAATAGCAACTCTCAG +
Preference number: 2 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMLQHST*SNSNSQ
Trigger: CTGAGAGTTGCTATTGGACCATGTAGAATGTTGCAA...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp GTAAACCTGCAGCAGAATCTAATTTTAAGAAACAGGCACCTAATTTaGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTC +
Preference number: 2 (lower is better)
Translates to: VNLQQNLILRNRHLI*IVKLTHLRKASIRL
Trigger: GAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAATTAGGTGCCTGTTTCTTAAAATTAGATTCTGCTGCAGGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR CAA 90 bp TGTTGTACAATCTTAATACCAGTGTGTCTCGCTTGCCAGGACTTCTaGCTTTTGCACACAGCTTTTAAGAAGGGCAATAAAGAAGGAATG +
Preference number: 2 (lower is better)
Translates to: CCTILIPVCLACQDF*LLHTAFKKGNKEGM
Trigger: CATTCCTTCTTTATTGCCCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGTATTAAGATTGTACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATAGCTACTTTTCTACGATaGTGGAATGGTTGTGCTAGT +
Preference number: 2 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIATFLR*WNGCAS
Trigger: ACTAGCACAACCATTCCATCATCGTAGAAAAGTAGC...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCGCATGGAAGTACCGCTaGAAACTTCTAACAACAGAA +
Preference number: 2 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQIAWKYR*KLLTTE
Trigger: TTCTGTTGTTAGAAGTTTTCAGCGGTACTTCCATGC...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTCAATAGCGGTTCAATaGCCACGAGGATCTTATGCA +
Preference number: 2 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDSIAVQ*PRGSYA
Trigger: TGCATAAGATCCTCGTGGTCATTGAACCGCTATTGA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACCTAGACATTTTAGCTaGTGCCACTGTGTATTATCA +
Preference number: 2 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPPRHFS*CHCVLS
Trigger: TGATAATACACAGTGGCAGCAGCTAAAATGTCTAGG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTTCCTTTGCTCCACAATaGCACTACAAAGCCTATTTT +
Preference number: 2 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFSFAPQ*HYKAYF
Trigger: AAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGA...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTCTAGTGGTACTTGGTaGTCACAGGGCACTGTACAA +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSSGTW*SQGTVQ
Trigger: TTGTACAGTGCCCTGTGAGCACCAAGTACCACTAGA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTATTTCCCTCACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 2 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVFPSLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAA...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTTTTCCCTCACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 2 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSIFPSLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAA...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCATTTTCTGCTAGCTGTTaGCTAATTTCTCGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLAFSASC*LISRSS
Trigger: AGAAGAACGAGAAATTAGGCAACAGCTAGCAGAAAA...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCGTTCGATCTTCAGTTTaGATGTGGAAACCAGTCATA +
Preference number: 2 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVVRSSV*MWKPVI
Trigger: TATGACTGGTTTCCACATGCAAACTGAAGATCGAAC...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGACCTGTCAAGTGTTaGACAAGACTTAAACCACTT +
Preference number: 2 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPRPVKC*TRLKPL
Trigger: AAGTGGTTTAAGTCTTGTCCAACACTTGACAGGTCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTCCATTAGAGGGCGATaGCCCACAGAAAAACCAACA +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSIRGR*PTEKPT
Trigger: TGTTGGTTTTTCTGTGGGCCATCGCCCTCTAATGGA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTCTTCAGTTTGCATGTaGAAACCAGTCATACCACCC +
Preference number: 2 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDSSVCM*KPVIPP
Trigger: GGGTGGTATGACTGGTTTCCACATGCAAACTGAAGA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTTGCAGCCTTTCTCATTaGTGGTGTTCCATTCTTAAT +
Preference number: 2 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVCSLSH*WCSILN
Trigger: ATTAAGAATGGAACACCACCAATGAGAAAGGCTGCA...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 90 bp AACAATAGCTATTGCTACAGTGGTACAAACTCTGTTCTGCCTTTCTaGAACTTTGAGGTTGTTCAGAAGTGTAGCCAATACATCATGAGG +
Preference number: 2 (lower is better)
Translates to: NNSYCYSGTNSVLPF*NFEVVQKCSQYIMR
Trigger: CCTCATGATGTATTGGCTACACTTCTGAACAACCTCAAAGTTCAAGAAAGGCAGAACAGAGTTTGTACCACTGTAGCAATAGCTATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGAGACATTTCCTATGCTaGAGATCATGCCCAATTGGT +
Preference number: 2 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVRHFLC*RSCPIG
Trigger: ACCAATTGGGCATGATCTTCAGCATAGGAAATGTCT...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCAGACATTTCCTATGCTaGAGATCATGCCCAATTGGT +
Preference number: 2 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPRHFLC*RSCPIG
Trigger: ACCAATTGGGCATGATCTTCAGCATAGGAAATGTCT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCATCTAGTGGTACTTGGTaGTCACAGGGCACTGTACAA +
Preference number: 2 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSSSGTW*SQGTVQ
Trigger: TTGTACAGTGCCCTGTGAGCACCAAGTACCACTAGA...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp AATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTTATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 2 (lower is better)
Translates to: NYHGPPMLFVFIFPVCNLYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...AAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGTTACAAATCCAACTTaGAAACCCTTAATGCTCACT +
Preference number: 2 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPVTNPT*KPLMLT
Trigger: AGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAAC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAACTCATTATGTGACCTaGAGTAGGGGTAGCCATGTT +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQTHYVT*SRGSHV
Trigger: AACATGGCTACCCCTACTCCAGGTCACATAATGAGT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCGCATGGAAGTACCGCTaGAAACTTCTAACAACAGAA +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFAWKYR*KLLTTE
Trigger: TTCTGTTGTTAGAAGTTTTCAGCGGTACTTCCATGC...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 2 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR TCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTAGACATTTCCTATGCTaGAGATCATGCCCAATTGGT +
Preference number: 2 (lower is better)
Translates to: ICYLNATKLYHRSEASMVRHFLC*RSCPIG
Trigger: ACCAATTGGGCATGATCTTCAGCATAGGAAATGTCT...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp ACTCTGTATTCATTCATTAAGGCAGGGAGTACTGTAAAGGGTGAACATGTTTCTAGGGCCAATGGCCTTTaGAATATAACCAAATGTGTT +
Preference number: 2 (lower is better)
Translates to: TLYSFIKAGSTVKGEHVSRANGL*NITKCV
Trigger: AACACATTTGGTTATATTGCAAAGGCCATTGGCCCT...AGAAACATGTTCACCCTTTACAGTACTCCCTGCCTTAATGAATGAATACAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAAGATGTGTCAGTCTCTTaGTTAAAGTTTCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKDVSVS*LKFQYL
Trigger: CAAATACTGAAACTTTAACCAAGAGACTGACACATC...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGCAAGTTTAAGGTGTaGAGTAGCTGTGCATTAAAC +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSKFKV*SSCALN
Trigger: GTTTAATGCACAGCTACTTCACACCTTAAACTTGCT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATAGCAAGTTTAAGGTGTaGAGTAGCTGTGCATTAAAC +
Preference number: 2 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHSKFKV*SSCALN
Trigger: GTTTAATGCACAGCTACTTCACACCTTAAACTTGCT...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTTACTGATGCATTGCTaGGTAGTGGCTTATAACATG +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFLLMHC*VVAYNM
Trigger: CATGTTATAAGCCACTACTCAGCAATGCATCAGTAA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTTCTACCAGTTATTATaGTGCACACAGAAGCAACGT +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFFYQLL*CTQKQR
Trigger: ACGTTGCTTCTGTGTGCATCATAATAACTGGTAGAA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGACATTTTAGCTGCTaGCACTGTGTATTATCACAG +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFRHFSC*HCVLSQ
Trigger: CTGTGATAATACACAGTGGCAGCAGCTAAAATGTCT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATCCTTTGCTCCACAATaGCACTACAAAGCCTATTTT +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSFAPQ*HYKAYF
Trigger: AAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAAACCTTTAACCCTTTaGGTTTCTATGGCATTGGCT +
Preference number: 2 (lower is better)
Translates to: KPKQYITRFTEAHYALEMKPLTL*VSMALA
Trigger: AGCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAACACAGAGGCACACTATaGTTTAGAAATGTGGTAACT +
Preference number: 2 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQHRGTL*FRNVVT
Trigger: AGTTACCACATTTCTAAAGCATAGTGTGCCTCTGTG...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAGTAGTTGGCATATTCTaGATCCATAAGAGGAATAAG +
Preference number: 2 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTVVGIF*IHKRNK
Trigger: CTTATTCCTCTTATGGATGCAGAATATGCCAACTAC...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTCCTGGATATAATTTCTaGTGCACCTACTTTGTTTGC +
Preference number: 2 (lower is better)
Translates to: ICYLNATKLYHRSEASMVPGYNF*CTYFVC
Trigger: GCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGG...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACGTTCTTGGTCACTACTaGCATTTACTGTTTAACATC +
Preference number: 2 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDVLGHY*HLLFNI
Trigger: GATGTTAAACAGTAAATGCCAGTAGTGACCAAGAAC...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTAAGACCTGTCAAGTGTTaGACAAGACTTAAACCACTT +
Preference number: 2 (lower is better)
Translates to: ISSSGDWNSRIRINITSLRPVKC*TRLKPL
Trigger: AAGTGGTTTAAGTCTTGTCCAACACTTGACAGGTCT...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGTCTTGTCCTTCTACCTaGAAAGAAAACTTGCATTAT +
Preference number: 2 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMSCPST*KENLHY
Trigger: ATAATGCAAGTTTTCTTTCCAGGTAGAAGGACAAGA...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR-3UTR CCA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAATGGAAGATTTCCAGATaGCTGGTCATTAACACTTTT +
Preference number: 2 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQWKISR*LVINTF
Trigger: AAAAGTGTTAATGACCAGCCATCTGGAAATCTTCCA...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGATCCCTACTAATTCATaGAGGCTGAAAAGTCTAGTA +
Preference number: 2 (lower is better)
Translates to: KPKQYITRFTEAHYALEMIPTNS*RLKSLV
Trigger: TACTAGACTTTTCAGCCTGCATGAATTAGTAGGGAT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCGGGAACCAATGTAGATaGAGTTGTAAATTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFGNQCR*SCKFSN
Trigger: ATTGGAAAATTTACAACTCCATCTACATTGGTTCCC...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp GGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGGAGTAGCAGCTCCCGC +
Preference number: 3 (lower is better)
Translates to: GSCASMAWCRMA*CITSSRSSSSR
Trigger: GCGGGAGCTGCTACTCCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp GGAGCACCAAGCCACCTCCAGCACTCCTGCCCGAGCTaGCAACATGGCTCCCAACTGTCACAAGATGCTCTG +
Preference number: 3 (lower is better)
Translates to: GAPSHLQHSCPS*QHGSQLSQDAL
Trigger: CAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTGCTGGAGGTGGCTTGGTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp GCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGTCCAGGAGTAGCAGCT +
Preference number: 3 (lower is better)
Translates to: ALEVAPPWPGVA*PGVSPRPGVAA
Trigger: AGCTGCTACTCCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp GTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTaGTGTCGCATGGCCTGGTGTATCACCTCGTCCAGG +
Preference number: 3 (lower is better)
Translates to: VFTSTGSCASMA*CRMAWCITSSR
Trigger: CCTGGACGAGGTGATACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp TCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCATATTTTTGAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SPRPGVAAPAGV*LGVGSHIFEPG
Trigger: CCCAGGCTCAAAAATATGGGATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp CGCTGGTGTGTGGCTAGGTGTAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: RWCVARCRIPYF*AWGCSRSLASL
Trigger: AAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTACACCTAGCCACACACCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp GGTTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTaGGCCTCCATGGCCTGGTGTCGCATGGCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: GFIPSVFTSTGS*ASMAWCRMAWC
Trigger: ACACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGCCAAGGCAGCAATGGCCAAAGCACTGATGGTCCGAACTTTCTGCTGCTCATCAACGCCGTTTTCGTTTaGATGGAGGCTGGGACGCTG +
Preference number: 3 (lower is better)
Translates to: SQGSNGQSTDGPNFLLLINAVFV*MEAGTL
Trigger: CAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGTT...GATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp CTGATCAGCTGTTTGATCCCAACGCCGTTTTCGTTTTaGTGGAGGCTGGGACGCTGCTGCTCCATTGACGAC +
Preference number: 3 (lower is better)
Translates to: LISCLIPTPFSF*WRLGRCCSIDD
Trigger: GTCGTCAATGGAGCAGCAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGTTGGGATCAAACAGCTGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp AGTAGGGGTAGCCATGTTCATGGCTGGTGTGCCAATTaGTGTCTTTCCAGGGGTCAGAACTGGAGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SRGSHVHGWCAN*CLSRGQNWSAS
Trigger: GGAAGCACTCCAGTTCTGACCCCTGGAAAGACACCAATTGGCACACCAGCCATGAACATGGCTACCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp TTGCTGCTTCAGCCAAGGCAGCAATGGCCAAAGCACTaGTGGTCCGAACTTTCTGCTGCTCATCCACAAGAC +
Preference number: 3 (lower is better)
Translates to: LLLQPRQQWPKH*WSELSAAHPQD
Trigger: GTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGCCTTGGCTGAAGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp TGGTGTGCCAATTGGTGTCTTTCCAGGGGTCAGAACTaGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTC +
Preference number: 3 (lower is better)
Translates to: WCANWCLSRGQN*SASTHLTSWCF
Trigger: GAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACCCCTGGAAAGACACCAATTGGCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp ATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTAT +
Preference number: 3 (lower is better)
Translates to: ITSSRSSSSRWCVARCRINLSQG*SPLLHY
Trigger: ATAATGGAGAAGGGGAGACAAACCTTGTGACAGATT...GATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGCCAAGGCAGCAATGGCCAAAGCACTGATGGTCCGAACTTTCTGCTGCTCATCCTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: SQGSNGQSTDGPNFLLLILTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...GATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGCCTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp GCTGCCAACATGGCTCCCAACTGTCACAAGATGCTCTaGGGATCAGTGCGGGGTCATCTTACACATTTTCAC +
Preference number: 3 (lower is better)
Translates to: AANMAPNCHKML*GSVRGHLTHFH
Trigger: GTGAAAATGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCCATGTTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp ACCCAAAGGTGTTGGAGTAGCTGTCAGCTTTCGAGCTaGAGTTCGAATAGGAACATAACCAGCTGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TQRCWSSCQLSS*SSNRNITSWRR
Trigger: CCTCCTCCAGCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCTACTCCAACACCTTTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAACGCCGTTTTCGTTTaGATGGAGGCTGGGACGCTG +
Preference number: 3 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFNAVFV*MEAGTL
Trigger: CAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGTT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp TTTCCAGGGGTCAGAACTGGAGTGCTTCCACCCATCTaGCTAGCTGGTGTTTCATCCCACCGTGATTTTCTT +
Preference number: 3 (lower is better)
Translates to: FPGVRTGVLPPI*LAGVSSHRDFL
Trigger: AAGAAAATCACGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACCCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAGAGTCTCGCTTCCCTTaGCACGACCTGGTGTCTCAT +
Preference number: 3 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLAESRFP*HDLVSH
Trigger: ATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACTC...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCATTTTTGAGCCTGGGGTaGCTCCAGGAGTCTCGCTTC +
Preference number: 3 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLAFLSLG*LQESRF
Trigger: GAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAA...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACACAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: GSQLSQDALRISAGSSYTQDFLL*HTAFKK
Trigger: CTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTG...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp CAGCGAATCTTCACAACCAAATCCATAAACCCCAAGTaGCATGTGCTGTACCACTGCACTAGCCGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: QRIFTTKSINPK*HVLYHCTSRLS
Trigger: AGACAGACGGCTAGTGCAGTGGTACAGCACATGTCACTTGGGGTTTATGGATTTGGTTGTGAAGATTCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTaGGTTGCTAATCCGGAATACGTACACTTTCGTGCC +
Preference number: 3 (lower is better)
Translates to: QHSLESSEVMGS*VANPEYVHFRA
Trigger: GGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
3UTR CCA 72 bp TTGCATGTGGAAACCAGTCATACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCGAGCTGGAGTTCGAAT +
Preference number: 3 (lower is better)
Translates to: LHVETSHTTQRC*SSCQLSSWSSN
Trigger: ATTCGAACTCCAGCTCGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGTATGACTGGTTTCCACATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp CAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATaGGGGTGTGCTGCTGGCATCTCAATAGGTAGAGGT +
Preference number: 3 (lower is better)
Translates to: QCLEAFLVITLG*GCAAGISIGRG
Trigger: ACCTCTACCTATTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGAATGGTTGTGCTAGTTaGAGGGGAACATCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLNGCAS*RGTSPE
Trigger: CTCAGGGGATGTTCCCCTCAAACTAGCACAACCATT...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GGGAAAGAATTACCATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 3 (lower is better)
Translates to: GKELPSAKGSRRSGEIIMPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...CATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGTAATTCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR CAA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCGAAGATCATGCCCAATaGGTAGTGTCATTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: SHPREILLSKGHETMSGGEDHAQ*VVSFFL
Trigger: CAGAAAGAATGACACTACCAATTGGGCATGATCTTC...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTACCAGTGTGTCTCGCTaGCCAGGACTTCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: REILLSKGHETMSGGIFGTSVSR*PGLLAF
Trigger: AAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGT...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAAAGTTACAAATCCAACTaGGAAACCCTTAATGCTCAC +
Preference number: 3 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQSYKSN*ETLNAH
Trigger: GTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACT...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACTACACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: HSLESSEVMGSWVANPEYYTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGTA...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
3UTR-3UTR CAA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGGCCCCTTGTGCTGACTaGCACACTAAAATTAGCAAA +
Preference number: 3 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQAPCAD*HTKISK
Trigger: TTTGCTAATTTTAGTGTGCAAGTCAGCACAAGGGGC...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR CAA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCAGTCTGATCAGCTGTTaGATCCCAACGCCGTTTTCG +
Preference number: 3 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPSLISC*IPTPFS
Trigger: CGAAAACGGCGTTGGGATCAAACAGCTGATCAGACT...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGCTTGCCAGGACTTCTaGCTTTTGCACACAGCTTTT +
Preference number: 3 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLACQDF*LLHTAF
Trigger: AAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGC...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp GGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTaGCGCAATGCAGCCTTTCTCATTGGTGGTGTTCCA +
Preference number: 3 (lower is better)
Translates to: GPAPNSRALSVI*RNAAFLIGGVP
Trigger: TGGAACACCACCAATGAGAAAGGCTGCATTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp CATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCATATAAGCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: HYTVLKGRGQVS*TFASPAYKHSG
Trigger: GCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp GCAGCAATGGCCAAAGCACTGATGGTCCGAACTTTCTaGTGCTCATCCACAAGACCATGTTCAATGATTTCA +
Preference number: 3 (lower is better)
Translates to: AAMAKALMVRTF*CSSTRPCSMIS
Trigger: TGAAATCATTGAACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAACTGAGGCTACTCTTCTaGCTGTCATTATTAACACAA +
Preference number: 3 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQLRLLF*LSLLTQ
Trigger: TTGTGTTAATAATGACAGCAAGAAGAGTAGCCTCAG...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp ACTCTGTATTCATTCATTAAGGCAGGGAGTACTGTAAAGGGTGAACATGTTTCTTTTTTGAGCCTGGGGTaGCTCCAGGAGTCTCGCTTC +
Preference number: 3 (lower is better)
Translates to: TLYSFIKAGSTVKGEHVSFLSLG*LQESRF
Trigger: GAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAA...AGAAACATGTTCACCCTTTACAGTACTCCCTGCCTTAATGAATGAATACAGAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCTGGCTGGTGTGCCAATaGGTGTCTTTCCAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPWLVCQ*VSFQGS
Trigger: TGACCCCTGGAAAGACACCAATTGGCACACCAGCCA...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp GCAATGGCCAAAGCACTGATGGTCCGAACTTTCTGCTaGTCATCCACAAGACCATGTTCAATGATTTCAACT +
Preference number: 3 (lower is better)
Translates to: AMAKALMVRTFC*SSTRPCSMIST
Trigger: AGTTGAAATCATTGAACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp CACAGAATCAAAAGATTCGATACCATAAGGAGTTGCTaGTTCAGCCAAGGCAGCAATGGCCAAAGCACTGAT +
Preference number: 3 (lower is better)
Translates to: HRIKRFDTIRSC*FSQGSNGQSTD
Trigger: ATCAGTGCTTTGGCCATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCGAATCTTTTGATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp CTTTCGAGCTGGAGTTCGAATAGGAACATAACCAGCTaGAGGAGGAAGTACCTTATATCCTTCTGGGAACAT +
Preference number: 3 (lower is better)
Translates to: LSSWSSNRNITS*RRKYLISFWEH
Trigger: ATGTTCCCAGAAGGATATAAGGTACTTCCTCCTCCAGCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp ACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATaGTTTGACTCGTTTGCCAAGAGCATTAACCACTGT +
Preference number: 3 (lower is better)
Translates to: TPQNCTTDLRQV*FDSFAKSINHC
Trigger: ACAGTGGTTAATGCTCTTGGCAAACGAGTCAAACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCGAGAAAAGCCCAACATaGTCCTGTTCTATCAGCATT +
Preference number: 3 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPEKSPT*SCSISI
Trigger: AATGCTGATAGAACAGGACAATGTTGGGCTTTTCTC...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTAT +
Preference number: 3 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFNLSQG*SPLLHY
Trigger: ATAATGGAGAAGGGGAGACAAACCTTGTGACAGATT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGAAGATCATGCCCAATaGGTAGTGTCATTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLEDHAQ*VVSFFL
Trigger: CAGAAAGAATGACACTACCAATTGGGCATGATCTTC...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATGGTTTGACTCGTTaGCCAAGAGCATTAACCACT +
Preference number: 3 (lower is better)
Translates to: REILLSKGHETMSGGIFGYGLTR*PRALTT
Trigger: AGTGGTTAATGCTCTTGGCAAACGAGTCAAACCATA...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp TATTCATCTTCCCGGTCTGCAATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATACTGTTCTGTTGACTGT +
Preference number: 3 (lower is better)
Translates to: YSSSRSAIFGGL*SANGSYCSVDC
Trigger: ACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR GCA 72 bp CTTATGCATACCTATGACATTTACAATGGCCTTCAGTaGTCCAAGAATGCTGCCCAATACTTCAGGGTACTC +
Preference number: 3 (lower is better)
Translates to: LMHTYDIYNGLQ*SKNAAQYFRVL
Trigger: GAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTAAATGTCATAGGTATGCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp GGTGTTCTTATCATCGTTGTAGATTCTTGGGTAATGTaGTATGAGAGCGTCCTGGGAACCAATGTAGATGGA +
Preference number: 3 (lower is better)
Translates to: GVLIIVVDSWVM*YESVLGTNVDG
Trigger: TCCATCTACATTGGTTCCCAGGACGCTCTCATAGCACATTACCCAAGAATCTACAACGATGATAAGAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRILTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGTCTAGAGAGGATGTGTaGAACTGCACCCTTAAGAAT +
Preference number: 3 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMSREDV*NCTLKN
Trigger: ATTCTTAAGGGTGCAGTTCAACACATCCTCTCTAGA...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR CAA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCCAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPQDFLL*HTAFKK
Trigger: CTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTG...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCGATACCATAAGGAGTaGCTGCTTCAGCCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFRYHKE*LLQPRQ
Trigger: CTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp GGAATACTTTTTCACCATAATCTAGAGAGGATGTGTTaGACTGCACCCTTAAGAATGCAGACAGGACTGGCA +
Preference number: 3 (lower is better)
Translates to: GILFHHNLERMC*TAPLRMQTGLA
Trigger: TGCCAGTCCTGTCTGCATTCTTAAGGGTGCAGTTCAACACATCCTCTCTAGATTATGGTGAAAAAGTATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR TCA 72 bp AGTGTCCCATCAATTTTTCCTCTTGACAAGTCTTCATaGCAACAGCAGTTCGAGAAATCAAGTCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: SVPSIFPLDKSS*QQQFEKSSQLP
Trigger: AGGCAGCTGACTTGATTTCTCGAACTGCTGTTGTCATGAAGACTTGTCAAGAGGAAAAATTGATGGGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp TCTTATCATCGTTGTAGATTCTTGGGTAATGTGCTATaGGAGCGTCCTGGGAACCAATGTAGATGGAGTTGT +
Preference number: 3 (lower is better)
Translates to: SYHRCRFLGNVL*ERPGNQCRWSC
Trigger: ACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCACATTACCCAAGAATCTACAACGATGATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp ATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAATGGATCATACTGTTC +
Preference number: 3 (lower is better)
Translates to: MLFVFIFPVCNL*RSVLSKWIILF
Trigger: GAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR-3UTR CAA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTAAATGGTTGTGCTAGTTaGAGGGGAACATCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: ISSSGDWNSRIRINITSLNGCAS*RGTSPE
Trigger: CTCAGGGGATGTTCCCCTCAAACTAGCACAACCATT...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAAACAGGCACCTAATTTaGATTGTGAAACTCACTCAC +
Preference number: 3 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLANRHLI*IVKLTH
Trigger: GTGAGTGAGTTTCACAATCAAAATTAGGTGCCTGTT...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR-3UTR CAA 90 bp ACTCTGTATTCATTCATTAAGGCAGGGAGTACTGTAAAGGGTGAACATGTTTCTGTATCTCTCTCTGTTTaGGGGGTTTCATCCCATCTG +
Preference number: 3 (lower is better)
Translates to: TLYSFIKAGSTVKGEHVSVSLSV*GVSSHL
Trigger: CAGATGGGATGAAACCCCCAAAACAGAGAGAGATAC...AGAAACATGTTCACCCTTTACAGTACTCCCTGCCTTAATGAATGAATACAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTAGTTCGATCTTCAGTTaGCATGTGGAAACCAGTCAT +
Preference number: 3 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVSSIFS*HVETSH
Trigger: ATGACTGGTTTCCACATGCAAACTGAAGATCGAACT...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR TCA 72 bp TGTAGATGGAGTTGTAAATTTTCCAATATACATCTCTaGCTTTCCGGGCTGGGTGAAACAGACCCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: CRWSCKFSNIHL*LSGLGETDPVN
Trigger: GTTTACAGGGTCTGTTTCACCCAGCCCGGAAAGTCAGAGATGTATATTGGAAAATTTACAACTCCATCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp ATCTGTTGTACAATCTTAATACCAGTGTGTCTCGCTTaGCAGGACTTCTTGCTTTTGCACACAGCTTTTAAG +
Preference number: 3 (lower is better)
Translates to: ICCTILIPVCLA*QDFLLLHTAFK
Trigger: CTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGTATTAAGATTGTACAACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp GAAAGAATTACCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTA +
Preference number: 3 (lower is better)
Translates to: ERITICKRIKTL*GNYHGPPMLFV
Trigger: TACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGTAATTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
3UTR CCA 72 bp GATGGGGGTGAGTCTAGGCAGCAGATCTTTAATTGGTaGAGTCATCTTATGCATACCTATGACATTTACAAT +
Preference number: 3 (lower is better)
Translates to: DGGESRQQIFNW*SHLMHTYDIYN
Trigger: ATTGTAAATGTCATAGGTATGCATAAGATGACTCCACCAATTAAAGATCTGCTGCCTAGACTCACCCCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp ACGAATATAGGTGTTCTTATCATCGTTGTAGATTCTTaGGTAATGTGCTATGAGAGCGTCCTGGGAACCAAT +
Preference number: 3 (lower is better)
Translates to: TNIGVLIIVVDS*VMCYESVLGTN
Trigger: ATTGGTTCCCAGGACGCTCTCATAGCACATTACCCAAGAATCTACAACGATGATAAGAACACCTATATTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACTGAGGCTACTCTTCTaGCTGTCATTATTAACACAA +
Preference number: 3 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPLRLLF*LSLLTQ
Trigger: TTGTGTTAATAATGACAGCAAGAAGAGTAGCCTCAG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAAATGGTTGTGCTAGTTaGAGGGGAACATCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: RSYKSNLETLNAHYQFVENGCAS*RGTSPE
Trigger: CTCAGGGGATGTTCCCCTCAAACTAGCACAACCATT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGTTACAAATCCAACTaGGAAACCCTTAATGCTCAC +
Preference number: 3 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSYKSN*ETLNAH
Trigger: GTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSLTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAAGTCTGATCAGCTGTTaGATCCCAACGCCGTTTTCG +
Preference number: 3 (lower is better)
Translates to: RSYKSNLETLNAHYQFVESLISC*IPTPFS
Trigger: CGAAAACGGCGTTGGGATCAAACAGCTGATCAGACT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAATTCTTTAGTCAAGTGTaGTTCTCGCATTACATCCAT +
Preference number: 3 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKFFSQV*FSHYIH
Trigger: ATGGATGTAATGCGAGAACAACACTTGACTAAAGAA...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp TGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTaGATGTGGAAACCAGTCATACCACCCAAAGGTGTT +
Preference number: 3 (lower is better)
Translates to: WSLTLFIVRSSV*MWKPVIPPKGV
Trigger: AACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp TTTCAGATCATCCACAATCCTGGATATAATTTCTGCTaGACCTACTTTGTTTGCCAACTCCACAGTAGTATC +
Preference number: 3 (lower is better)
Translates to: FQIIHNPGYNFC*TYFVCQLHSSI
Trigger: GATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGGATTGTGGATGATCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp TCCTCACTTGCTAAACACAGCAGACCTGTCAAGTGTTaGACAAGACTTAAACCACTTTCTTTAAATGTGTTC +
Preference number: 3 (lower is better)
Translates to: SSLAKHSRPVKC*TRLKPLSLNVF
Trigger: GAACACATTTAAAGAAAGTGGTTTAAGTCTTGTCCAACACTTGACAGGTCTGCTGTGTTTAGCAAGTGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp CTTCTACCAGTTATTATGATGCACACAGAAGCAACGTaGTGTACAAAGAGATGTGTCAGTCTCTTGGTTAAA +
Preference number: 3 (lower is better)
Translates to: LLPVIMMHTEAT*CTKRCVSLLVK
Trigger: TTTAACCAAGAGACTGACACATCTCTTTGTACACCACGTTGCTTCTGTGTGCATCATAATAACTGGTAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp TTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTaGAAACCAGTCATACCACCCAAAGGTGTTGGAGTA +
Preference number: 3 (lower is better)
Translates to: LTLFIVRSSVCM*KPVIPPKGVGV
Trigger: TACTCCAACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CCA 72 bp CTGCCTGAATTACATGAGGAGATGTCTCAAATACATTaGGCCATACATAGTTCAACAAGTGATTCAGCGAAT +
Preference number: 3 (lower is better)
Translates to: LPELHEEMSQIH*AIHSSTSDSAN
Trigger: ATTCGCTGAATCACTTGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGAGAAAAGCCCAACATaGTCCTGTTCTATCAGCATT +
Preference number: 3 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQEKSPT*SCSISI
Trigger: AATGCTGATAGAACAGGACAATGTTGGGCTTTTCTC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTAT +
Preference number: 3 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQNLSQG*SPLLHY
Trigger: ATAATGGAGAAGGGGAGACAAACCTTGTGACAGATT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCAGTTACAAATCCAACTaGGAAACCCTTAATGCTCAC +
Preference number: 3 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPSYKSN*ETLNAH
Trigger: GTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAAAACCTTTAACCCTTaGCGTTTCTATGGCATTGGC +
Preference number: 3 (lower is better)
Translates to: KPKQYITRFTEAHYALEMKTFNP*RFYGIG
Trigger: GCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTTT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
3UTR TCA 72 bp TGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTaGCTGCCTTGCAAACCTAAATTCTCTATCAAGTCA +
Preference number: 3 (lower is better)
Translates to: WFTYLFPPAYKS*LPCKPKFSIKS
Trigger: TGACTTGATAGAGAATTTAGGTTTGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCATTACTGAAGGTCATTaGACATCAACCATAGAGAGC +
Preference number: 3 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFITEGH*TSTIES
Trigger: GCTCTCTATGGTTGATGTCAAATGACCTTCAGTAAT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR-3UTR CAA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGTTCTTTAGTCAAGTGTaGTTCTCGCATTACATCCAT +
Preference number: 3 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVFFSQV*FSHYIH
Trigger: ATGGATGTAATGCGAGAACAACACTTGACTAAAGAA...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR GCA 72 bp TTTAGTTCTCCAGCTTTAGCTTTTTCTGCTAGCTGTTaGCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGT +
Preference number: 3 (lower is better)
Translates to: FSSPALAFSASC*LISRSSLVKCC
Trigger: ACAACACTTGACTAAAGAAGAACGAGAAATTAGGCAACAGCTAGCAGAAAAAGCTAAAGCTGGAGAACTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCACGAGCACTGGAAGTTaGGCCTCCATGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ITSSRSSSSRWCVARCRITSTGS*ASMAWC
Trigger: ACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGT...GATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGTCAGAACTGGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTCATCCCACCGGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: GQNWSASTHLTSWCFIPPAPAGV*LGVGSH
Trigger: ATGGGATCCTACACCTAGCCACACACCAGCGGGAGC...CGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp GGGTTTCATCCCATCTGTTTTTACGAGCACTGGAAGTaGCGCCTCCATGGCCTGGTGTCGCATGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GFHPICFYEHWK*RLHGLVSHGLV
Trigger: CACCAGGCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCTTGGGTAATGTGCTATaGGAGCGTCCTGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: ITSSRSSSSRWCVARCRILGNVL*ERPGNQ
Trigger: TTGGTTCCCAGGACGCTCTCATAGCACATTACCCAA...GATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHRGQVS*TFASPA
Trigger: TGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp TTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTaGCACGACCTGGTGTCTCATCCCATCTTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLGLLQESRFP*HDLVSHPILRK
Trigger: CTTCCTTAAGATGGGATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATATGGTTGTGCTAGTTTaGGGGGAACATCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHMVVLV*GEHPLR
Trigger: CCTCAGGGGATGTTCCCCTCAAACTAGCACAACCAT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGTCAGAACTGGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTCATCCCACCGATGGTTGTGCTAGTTTaGGGGGAACATCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GQNWSASTHLTSWCFIPPMVVLV*GEHPLR
Trigger: CCTCAGGGGATGTTCCCCTCAAACTAGCACAACCAT...CGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCACGAGCACTGGAAGTTaGGCCTCCATGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGTSTGS*ASMAWC
Trigger: ACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGT...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCGCAATAAAGAAGGAATaGCCAGGGCAGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: ITSSRSSSSRWCVARCRIAIKKE*PGQRLQ
Trigger: TTGTAGCCTCTGCCCTGGGCATTCCTTCTTTATTGC...GATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCATGTGCTGTACCACTaGACTAGCCGTCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHHVLYH*TSRLSV
Trigger: CACAGACAGACGGCTAGTGCAGTGGTACAGCACATG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACAGTAGCAGCTCCCGCTaGTGTGTGGCTAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDSSSSR*CVARCR
Trigger: CCTACACCTAGCCACACACCAGCGGGAGCTGCTACT...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAATGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQWPGVA*PGVSPR
Trigger: ACGAGGTGATACACCAGGCCATGCGACACCAGGCCA...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGCTTCAATATCTTCGTaGGTCTTGGCGATCTTCGCC +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHASISS*VLAIFA
Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATTGAAGC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCACGCTGCTGCTCCATTaGCGACTTTTAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGTLLLH*RLLVLQ
Trigger: CTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGT...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTACGCCGTTTTCGTTTTaGTGGAGGCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGTPFSF*WRLGRC
Trigger: GCAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGT...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTCCATAAACCCCAAGTaGCATGTGCTGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSINPK*HVLYHC
Trigger: GCAGTGGTACAGCACATGTCACTTGGGGTTTATGGA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCTCCATAAACCCCAAGTaGCATGTGCTGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGSINPK*HVLYHC
Trigger: GCAGTGGTACAGCACATGTCACTTGGGGTTTATGGA...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATACTTTCCGGGCTGGGTaGAACAGACCCTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHTFRAG*NRPCKQ
Trigger: TTGTTTACAGGGTCTGTTTCACCCAGCCCGGAAAGT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTTGGGTAATGTGCTATaGGAGCGTCCTGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHLGNVL*ERPGNQ
Trigger: TTGGTTCCCAGGACGCTCTCATAGCACATTACCCAA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGATACCATAAGGAGTTaGTGCTTCAGCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHDTIRS*CFSQGS
Trigger: GCTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTGCGCCTCCATGGCCTaGTGTCGCATGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFCASMA*CRMAWC
Trigger: ACACCAGGCCATGCGACACCAGGCCATGGAGGCGCA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACACCAGGGGTCTCTGCCTaGTCCCAACTTGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GSQLSQDALRISAGSSYTPGVSA*SQLDSF
Trigger: AAAACTATCAAGTTGGGATCAGGCAGAGACCCCTGG...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGTCAGAACTGGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTCATCCCACCGTTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GQNWSASTHLTSWCFIPPFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...CGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGGCCCATCCACTTCCATaGCCAGGAGTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVAHPLP*PGVSLS
Trigger: AGAGAGAGATACTCCTGGGCATGGAAGTGGATGGGC...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGTCAGAACTGGAGTGCTTCCACCCATCTGACTAGCTGGTGTTTCATCCCACCGGATTCTTGGGTAATGTaGTATGAGAGCGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQNWSASTHLTSWCFIPPDSWVM*YESVLG
Trigger: TCCCAGGACGCTCTCATAGCACATTACCCAAGAATC...CGGTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCAGTTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAATCTCCCCAGGACTTATaGGGAGCTTTACCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQSPQDL*GALPQG
Trigger: ACCTTGGGGTAAAGCTCCGCATAAGTCCTGGGGAGA...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCCACTCCTGCCCGAGCTaGCAACATGGCTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPHSCPS*QHGSQL
Trigger: CAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTG...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCCCTTTCCTCTGTGTTaGCGGATACCCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHPFPLC*RIPFHK
Trigger: TTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCACACACAGACGGAACTaGCGCTCCCAAGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSITHRRN*RSQELP
Trigger: CGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGT...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTCAATAGCGGTTCAATaGCCACGAGGATCTTATGCA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSIAVQ*PRGSYA
Trigger: TGCATAAGATCCTCGTGGTCATTGAACCGCTATTGA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTTTGGGTAATGTGCTATaGGAGCGTCCTGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFLGNVL*ERPGNQ
Trigger: TTGGTTCCCAGGACGCTCTCATAGCACATTACCCAA...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTACGAGCACTGGAAGTTaGGCCTCCATGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFTSTGS*ASMAWC
Trigger: ACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAGTAATCTGACGCAATaGAGCCTTTCTCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSNLTQ*SLSHWW
Trigger: CCACCAATGAGAAAGGCTGCATTGCGTCAGATTACT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAACCAGTGTGTCTCGCTTaGCAGGACTTCTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQPVCLA*QDFLLL
Trigger: CAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGG...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSRGQVS*TFASPA
Trigger: TGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCT...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACATGCTCTGAGGATCAGTaGGGGGTCATCTTACACATT +
Preference number: 4 (lower is better)
Translates to: GSQLSQDALRISAGSSYTCSEDQ*GVILHI
Trigger: AATGTGTAAGATGACCCCGCACTGATCCTCAGAGCA...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTGGGGTTTCTGTGCCCTaGCTGCCCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFGVSVP*LPSSSS
Trigger: GCTGGAAGAGGAGGGCAGGCAGGGCACAGAAACCCC...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAGTAGCAGCTCCCGCTaGTGTGTGGCTAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSSSSR*CVARCR
Trigger: CCTACACCTAGCCACACACCAGCGGGAGCTGCTACT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTTGCGCCTCCATGGCCTaGTGTCGCATGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFCASMA*CRMAWC
Trigger: ACACCAGGCCATGCGACACCAGGCCATGGAGGCGCA...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCTCTTCAGTTTGCATGTaGAAACCAGTCATACCACCC +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGSSVCM*KPVIPP
Trigger: GGGTGGTATGACTGGTTTCCACATGCAAACTGAAGA...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCGCTTCAATATCTTCGTaGGTCTTGGCGATCTTCGCC +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIASISS*VLAIFA
Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATTGAAGC...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR TCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCTCCAATATACATCTCTaGCTTTCCGGGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGSNIHL*LSGLGE
Trigger: TTCACCCAGCCCGGAAAGTCAGAGATGTATATTGGA...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGCTACTTTTCTACGATaGTGGAATGGTTGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHATFLR*WNGCAS
Trigger: ACTAGCACAACCATTCCATCATCGTAGAAAAGTAGC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGTGTCACAAGATGCTCTaGGGATCAGTGCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQCHKML*GSVRGH
Trigger: ATGACCCCGCACTGATCCTCAGAGCATCTTGTGACA...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCGTATCCAGCAAATCTaGTGTCACTTCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHRIQQI*CHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCTTTTCTGCTAGCTGTTaGCTAATTTCTCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ITSSRSSSSRWCVARCRIFSASC*LISRSS
Trigger: AGAAGAACGAGAAATTAGGCAACAGCTAGCAGAAAA...GATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTGTTCATGGCTGGTGTaGCAATTGGTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVCSWLV*QLVSFQ
Trigger: CTGGAAAGACACCAATTGGCACACCAGCCATGAACA...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCAGACCAGCAGCCTTTaGCAAATTAGAAATGATCTC +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHQTSSL*QIRNDL
Trigger: GAGATCATTTCTAATTTGGCAAAGGCTGCTGGTCTG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCTTGCCAGGACTTCTTaGTTTTGCACACAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHLARTS*FCTQLL
Trigger: TAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATGGTCCGAACTTTCTaGTGCTCATCCACAAGACCA +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGMVRTF*CSSTRP
Trigger: TGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCAT...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTCCAAAGCCATCCTGTaGTGCCAGAAGTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSKAIL*CQKCLK
Trigger: TTTTAAACACTTCTGGCAGCACAGGATGGCTTTGGA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCACCTCGTCCAGGAGTAGCAGCTCCCGCTGGTGTGTGGCTAGGTGTAGGATCTACTTCCTAGACAACTaGTGCCTAAAATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: ITSSRSSSSRWCVARCRIYFLDN*CLKSNA
Trigger: AGCATTTGATTTTAGGCAGCAGTTGTCTAGGAAGTA...GATCCTACACCTAGCCACACACCAGCGGGAGCTGCTACTCCTGGACGAGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTCGTTTTGATGGAGGCTaGGACGCTGCTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFRFDGG*DAAAPL
Trigger: CAATGGAGCAGCAGCGTCCCAGCCTCCATCAAAACG...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCTGCGCCTCCATGGCCTaGTGTCGCATGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETCASMA*CRMAWC
Trigger: ACACCAGGCCATGCGACACCAGGCCATGGAGGCGCA...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTATCTCTCTCTGTTTTaGGGGTTTCATCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHYLSLF*GFHPIC
Trigger: ACAGATGGGATGAAACCCCCAAAACAGAGAGAGATA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCGTGATTTTCTTTTACTaGCTCCAGGAGTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGVIFFY*LQESVF
Trigger: AAACACCGACTCCTGGAGCCAGTAAAAGAAAATCAC...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAACCCTTTCCTCTGTGTTaGCGGATACCCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQPFPLC*RIPFHK
Trigger: TTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGG...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACTCCATTAGAGGGCGATaGCCCACAGAAAAACCAACA +
Preference number: 4 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDSIRGR*PTEKPT
Trigger: TGTTGGTTTTTCTGTGGGCCATCGCCCTCTAATGGA...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAATCATCTAGTGGTACTTaGTGCTCACAGGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQSSSGT*CSQGTV
Trigger: TACAGTGCCCTGTGAGCACCAAGTACCACTAGATGA...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp CTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTaGCATCCCCTGCATATAAGCACAGTGGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: LFLKVEGRSHAP*HPLHISTVAGI
Trigger: TATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp AACAATGGTCTCAGTGGTTCTCACCCTAGGGAGATTTaGCTCTCCAAGGGACATGAGACAATGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NNGLSGSHPREI*LSKGHETMSGG
Trigger: GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGAACCACTGAGACCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR TCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAATATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTCCAGGGGTCTCTGCCTaGTCCCAACTTGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSPGVSA*SQLDSF
Trigger: AAAACTATCAAGTTGGGATCAGGCAGAGACCCCTGG...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCGCTTTATCAGTAATCTaGCGCAATGCAGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGALSVI*RNAAFL
Trigger: GAGAAAGGCTGCATTGCGTCAGATTACTGATAAAGC...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGCAATGGCCAAAGCACTaGTGGTCCGAACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQQWPKH*WSELSA
Trigger: AGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTG...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTGAGGCAAGTATGGTTTaGCTCGTTTGCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGEASMV*LVCQEH
Trigger: ATGCTCTTGGCAAACGAGTCAAACCATACTTGCCTC...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAATGTTCATGGCTGGTGTaGCAATTGGTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQCSWLV*QLVSFQ
Trigger: CTGGAAAGACACCAATTGGCACACCAGCCATGAACA...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGGACGCTGCTGCTCCATTGACGACTTTTAGTTCTCCAGCTTTAGCTTTTTCTCATGTGCTGTACCACTaGACTAGCCGTCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: WDAAAPLTTFSSPALAFSHVLYH*TSRLSV
Trigger: CACAGACAGACGGCTAGTGCAGTGGTACAGCACATG...AGAAAAAGCTAAAGCTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTCTCCCCAGGACTTATaGGGAGCTTTACCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: REILLSKGHETMSGGIFGSPQDL*GALPQG
Trigger: ACCTTGGGGTAAAGCTCCGCATAAGTCCTGGGGAGA...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTACTCATTATGTGACCTaGAGTAGGGGTAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFTHYVT*SRGSHV
Trigger: AACATGGCTACCCCTACTCCAGGTCACATAATGAGT...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCTTCAGTTTGCATGTaGAAACCAGTCATACCACCC +
Preference number: 4 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVSSVCM*KPVIPP
Trigger: GGGTGGTATGACTGGTTTCCACATGCAAACTGAAGA...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATTCCTCATCAGGAGACTaGAATTCTCGAATAAGGATT +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHSSSGD*NSRIRI
Trigger: AATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGA...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTACGCTGCTGCTCCATTaGCGACTTTTAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFTLLLH*RLLVLQ
Trigger: CTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAACGCCGTTTTCGTTTTaGTGGAGGCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTTPFSF*WRLGRC
Trigger: GCAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGT...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATCCCACCGCCAAGCCTaGAGCTGTTCAGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSHRQA*SCSGVI
Trigger: TATGACTCCTGAACAGCTTCAGGCTTGGCGGTGGGA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTACTTTCCGGGCTGGGTaGAACAGACCCTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFTFRAG*NRPCKQ
Trigger: TTGTTTACAGGGTCTGTTTCACCCAGCCCGGAAAGT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCACTTTCCGGGCTGGGTaGAACAGACCCTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPTFRAG*NRPCKQ
Trigger: TTGTTTACAGGGTCTGTTTCACCCAGCCCGGAAAGT...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAAGTTAGTATGGGCCTGTaGATTCTGGCATACATGTTT +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQVSMGL*ILAYMF
Trigger: AAACATGTATGCCAGAATTCACAGGCCCATACTAAC...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR TCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAAAGACATTTCCTATGCTaGAGATCATGCCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQRHFLC*RSCPIG
Trigger: ACCAATTGGGCATGATCTTCAGCATAGGAAATGTCT...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCGCTCTCCAAGGGACATaGGACAATGTCTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPALQGT*DNVWRH
Trigger: ATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGC...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCTGTCACAAGATGCTCTaGGGATCAGTGCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPCHKML*GSVRGH
Trigger: ATGACCCCGCACTGATCCTCAGAGCATCTTGTGACA...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTCCTGCCTACAAATCTTaGCTGCCTTGCAAACCTAAA +
Preference number: 4 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGPAYKS*LPCKPK
Trigger: TTTAGGTTTGCAAGGCAGTCAAGATTTGTAGGCAGG...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: GSQLSQDALRISAGSSYTIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATGGAGGCTGGGACGCTaGTGCTCCATTGACGACTTT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPWRLGR*CSIDDF
Trigger: AAAGTCGTCAATGGAGCAGCAGCGTCCCAGCCTCCA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTAGTAATCTGACGCAATaGAGCCTTTCTCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGSNLTQ*SLSHWW
Trigger: CCACCAATGAGAAAGGCTGCATTGCGTCAGATTACT...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTCCAGTGTGTCTCGCTTaGCAGGACTTCTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFPVCLA*QDFLLL
Trigger: CAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGG...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCATACGTACACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIIRTLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGTACGTAT...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTTTTCCCTCACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSFPSLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAA...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAACAACCACAACAGAGTaGAGTGTGATAACAATACAG +
Preference number: 4 (lower is better)
Translates to: GSQLSQDALRISAGSSYTTTTTE*SVITIQ
Trigger: CTGTATTGTTATCACACTGCACTCTGTTGTGGTTGT...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCACTGGGATGGGGGTGTaGTGCTGGCATCTCAATAGG +
Preference number: 4 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVTGMGV*CWHLNR
Trigger: CCTATTGAGATGCCAGCAGCACACCCCCATCCCAGT...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGGGGGTTTCTGTGCCCTaGCTGCCCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMGVSVP*LPSSSS
Trigger: GCTGGAAGAGGAGGGCAGGCAGGGCACAGAAACCCC...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTTACTTATTCCCTCCTaGCTACAAATCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVLLIPS*LQILTA
Trigger: GGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAA...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTTATCTTCGTGAGTCTTaGCGATCTTCGCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFYLRES*RSSPFC
Trigger: ACAAAATGGCGAAGATCGCCAAGACTCACGAAGATA...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: HLQKDQDALGKLSWSAYARGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...AGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CCA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACCCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LESSEVMGSWVANPEYVHPVCNL*RSVLSK
Trigger: TTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGG...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTCGTTTTGATGGAGGCTaGGACGCTGCTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVRFDGG*DAAAPL
Trigger: CAATGGAGCAGCAGCGTCCCAGCCTCCATCAAAACG...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQIAPAGV*LGVGSH
Trigger: ATGGGATCCTACACCTAGCCACACACCAGCGGGAGC...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGTGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMWCRMA*CITSSR
Trigger: CCTGGACGAGGTGATACACCAGGCCATGCGACACCA...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTTGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGWPGVA*PGVSPR
Trigger: ACGAGGTGATACACCAGGCCATGCGACACCAGGCCA...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGGAAGTTGCGCCTCCATaGCCTGGTGTCGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVEVAPP*PGVAWP
Trigger: AGGCCATGCGACACCAGGCCATGGAGGCGCAACTTC...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTGTTTTTACGAGCACTaGAAGTTGCGCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFCFYEH*KLRLHG
Trigger: GCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCCAGATCTTTAATTGGTaGAGTCATCTTATGCATACC +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGQIFNW*SHLMHT
Trigger: GGTATGCATAAGATGACTCCACCAATTAAAGATCTG...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGTTACAAATCCAACTTaGAAACCCTTAATGCTCACT +
Preference number: 4 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHVTNPT*KPLMLT
Trigger: AGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAAC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCGTTACAAATCCAACTTaGAAACCCTTAATGCTCACT +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGVTNPT*KPLMLT
Trigger: AGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAAC...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTCACACAGAAGCAACGTaGTGTACAAAGAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGHTEAT*CTKRCV
Trigger: GACACATCTCTTTGTACACCACGTTGCTTCTGTGTG...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TCTTTGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTCTGTTGACTGTGGTAGCTTCAATATCTTCGTaGGTCTTGGCGATCTTCGCC +
Preference number: 4 (lower is better)
Translates to: SLEVCAQQMDHTVLLTVVASISS*VLAIFA
Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATTGAAGC...TACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR TCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPRIPYF*AWGCSR
Trigger: CCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGTGCTTCCACCCATCTaGCTAGCTGGTGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPVLPPI*LAGVSS
Trigger: GGATGAAACACCAGCTAGTCAGATGGGTGGAAGCAC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTGTGCTTCCACCCATCTaGCTAGCTGGTGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVVLPPI*LAGVSS
Trigger: GGATGAAACACCAGCTAGTCAGATGGGTGGAAGCAC...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCCAATGGCCAAAGCACTaGTGGTCCGAACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPQWPKH*WSELSA
Trigger: AGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTG...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTCCAATATACATCTCTaGCTTTCCGGGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSNIHL*LSGLGE
Trigger: TTCACCCAGCCCGGAAAGTCAGAGATGTATATTGGA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACTTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LESSEVMGSWVANPEYVHFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAAAGTCTCGCTTCCCTTTaGACGACCTGGTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKSLASL*TTWCLI
Trigger: GATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACT...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTGCAATAAAGAAGGAATaGCCAGGGCAGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFAIKKE*PGQRLQ
Trigger: TTGTAGCCTCTGCCCTGGGCATTCCTTCTTTATTGC...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCACCATAAGGAGTTGCTaGTTCAGCCAAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPTIRSC*FSQGSN
Trigger: ATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATGGT...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACATGTTTTAATGTAGTTTaGTTCTACACCATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSQLSQDALRISAGSSYTCFNVV*FYTICP
Trigger: GGGACAGATGGTGTAGAAGCAAACTACATTAAAACA...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTCGCATGGCATGATCAATATCTGCTaGTCCCAAATTACCCATAAT +
Preference number: 4 (lower is better)
Translates to: ICFYEHWKLRLHGLVSHGMINIC*SQITHN
Trigger: ATTATGGGTAATTTGGGAGCAGCAGATATTGATCAT...GCCATGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCAGGGCCAATGGCCTTTaGAATATAACCAAATGTGTT +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGRANGL*NITKCV
Trigger: AACACATTTGGTTATATTGCAAAGGCCATTGGCCCT...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCAGAATAGAAGCCATCTaGAAAAGGATCAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIRIEAI*KRIKTL
Trigger: GAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCT...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414963.2
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTTTCCCTCACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFFPSLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTAAACCTTTAACCCTTTaGGTTTCTATGGCATTGGCT +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFKPLTL*VSMALA
Trigger: AGCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTT...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTCCCCTTGTGCTGACTTaGACACTAAAATTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFPLVLT*TLKLAK
Trigger: TTTTGCTAATTTTAGTGTGCAAGTCAGCACAAGGGG...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCCACAGAGGCACACTATaGTTTAGAAATGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGHRGTL*FRNVVT
Trigger: AGTTACCACATTTCTAAAGCATAGTGTGCCTCTGTG...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACCAACTGTCACAAGATaGTCTGAGGATCAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPPTVTR*SEDQCG
Trigger: CCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGCACTCCTGCCCGAGCTaGCAACATGGCTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMHSCPS*QHGSQL
Trigger: CAGTTGGGAGCCATGTTGGCAGCTCGGGCAGGAGTG...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAAGGAAGGGGTTTCTGTaGCCTGCCTGCCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTRKGFL*PACPPL
Trigger: AAGAGGAGGGCAGGCAGGGCACAGAAACCCCTTCCT...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACAGGAAGGGGTTTCTGTaGCCTGCCTGCCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDRKGFL*PACPPL
Trigger: AAGAGGAGGGCAGGCAGGGCACAGAAACCCCTTCCT...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: HSLESSEVMGSWVANPEYRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp GGATCATACTGTTCTGTTGACTGTGGTATATCATTAAGCAATGCCACAGGGGCACCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GSYCSVDCGISLSNATGAPVCNL*RSVLSK
Trigger: TTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGG...TGCCCCTGTGGCATTGCTTAATGATATACCACAGTCAACAGAACAGTATGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGLGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGAAGTTGCGCCTCCATaGCCTGGTGTCGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQEVAPP*PGVAWP
Trigger: AGGCCATGCGACACCAGGCCATGGAGGCGCAACTTC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGGAAGTTGCGCCTCCATaGCCTGGTGTCGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMEVAPP*PGVAWP
Trigger: AGGCCATGCGACACCAGGCCATGGAGGCGCAACTTC...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACTGCAGCCTTTCTCATTaGTGGTGTTCCATTCTTAAT +
Preference number: 4 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDCSLSH*WCSILN
Trigger: ATTAAGAATGGAACACCACCAATGAGAAAGGCTGCA...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTTCCTCATCAGGAGACTaGAATTCTCGAATAAGGATT +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFSSSGD*NSRIRI
Trigger: AATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGA...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCTTGCAACATTCTACATaGTCCAATAGCAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: SHPREILLSKGHETMSGGLQHST*SNSNSQ
Trigger: CTGAGAGTTGCTATTGGACCATGTAGAATGTTGCAA...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTCCATTAGAGGGCGATaGCCCACAGAAAAACCAACA +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSIRGR*PTEKPT
Trigger: TGTTGGTTTTTCTGTGGGCCATCGCCCTCTAATGGA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp CGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCTGCAATCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RSGEIIMVRLCF*YSSSRSAIFGG
Trigger: ACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR TCA 90 bp GGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAAGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GKLSWSAYAFCIHLPGLQAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...TTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR TCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: ICKRIKTLWGNYHGPPMLYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...AAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR TCA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: LESSEVMGSWVANPEYVHYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR TCA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: HSLESSEVMGSWVANPEYYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCACGCCGTTTTCGTTTTaGTGGAGGCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFTPFSF*WRLGRC
Trigger: GCAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCTCCCACCGCCAAGCCTaGAGCTGTTCAGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRISHRQA*SCSGVI
Trigger: TATGACTCCTGAACAGCTTCAGGCTTGGCGGTGGGA...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATCCATAAACCCCAAGTaGCATGTGCTGTACCACTGC +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSINPK*HVLYHC
Trigger: GCAGTGGTACAGCACATGTCACTTGGGGTTTATGGA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGATGGTTGTGCTAGTTTaGGGGGAACATCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRMVVLV*GEHPLR
Trigger: CCTCAGGGGATGTTCCCCTCAAACTAGCACAACCAT...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAATTCTACCAGTTATTATaGTGCACACAGAAGCAACGT +
Preference number: 4 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQFYQLL*CTQKQR
Trigger: ACGTTGCTTCTGTGTGCATCATAATAACTGGTAGAA...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGCTCTCCAAGGGACATaGGACAATGTCTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRALQGT*DNVWRH
Trigger: ATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGC...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTCCTGCCTACAAATCTTaGCTGCCTTGCAAACCTAAA +
Preference number: 4 (lower is better)
Translates to: REILLSKGHETMSGGIFGPAYKS*LPCKPK
Trigger: TTTAGGTTTGCAAGGCAGTCAAGATTTGTAGGCAGG...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQSFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAACGTATCCAGCAAATCTaGTGTCACTTCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: QHSLESSEVMGSWVANPERIQQI*CHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACG...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAATATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 4 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGACCACGAGGATCTTATaGACATATGGACGAACTAAG +
Preference number: 4 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQTTRIL*TYGRTK
Trigger: CTTAGTTCGTCCATATGTGCATAAGATCCTCGTGGT...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAACCATAAGGAGTTGCTaGTTCAGCCAAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLATIRSC*FSQGSN
Trigger: ATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATGGT...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTAAGTCAGCTGCCTGTTaGCTAACTTTAGCAGATTTG +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSKSAAC*LTLADL
Trigger: CAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTT...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCATCAGTGCTCCAAGAATaGTGCCCAATACTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLASVLQE*CPILQG
Trigger: ACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGA...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACGGTGGAGTCATCTTATaGATACCTATGACATTTACA +
Preference number: 4 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDGGVIL*IPMTFT
Trigger: TGTAAATGTCATAGGTATGCATAAGATGACTCCACC...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAATGCAACAATAGCTATTaGTACAGTGGTACAAACTCT +
Preference number: 4 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQCNNSY*YSGTNS
Trigger: AGAGTTTGTACCACTGTAGCAATAGCTATTGTTGCA...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCACCCCAAGTGACATGTaGTGTACCACTGCACTAGCC +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETTPSDM*CTTALA
Trigger: GGCTAGTGCAGTGGTACAGCACATGTCACTTGGGGT...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCGAGGATGTGTTGAACTaGACCCTTAAGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPEDVLN*TLKNAD
Trigger: GTCTGCATTCTTAAGGGTGCAGTTCAACACATCCTC...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQLGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: RIKTLWGNYHGPPMLFVFRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...GAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CCA 90 bp AGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SLESSEVMGSWVANPEYVRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...TACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFWCRMA*CITSSR
Trigger: CCTGGACGAGGTGATACACCAGGCCATGCGACACCA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTGGCCTGGTGTCGCATaGCCTGGTGTATCACCTCGT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFWPGVA*PGVSPR
Trigger: ACGAGGTGATACACCAGGCCATGCGACACCAGGCCA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCGGCTGGTGTGCCAATTaGTGTCTTTCCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIGWCAN*CLSRGQ
Trigger: CTGACCCCTGGAAAGACACCAATTGGCACACCAGCC...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMSHVHG*CANWCL
Trigger: AAGACACCAATTGGCACACCAGCCATGAACATGGCT...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGTGGAAGATTTCCAGATaGCTGGTCATTAACACTTTT +
Preference number: 4 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVWKISR*LVINTF
Trigger: AAAAGTGTTAATGACCAGCCATCTGGAAATCTTCCA...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTGATCTGAGGCAAGTATaGTTTGACTCGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFDLRQV*FDSFAK
Trigger: CTTGGCAAACGAGTCAAACCATACTTGCCTCAGATC...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCGATCTGAGGCAAGTATaGTTTGACTCGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPDLRQV*FDSFAK
Trigger: CTTGGCAAACGAGTCAAACCATACTTGCCTCAGATC...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTCAGCAGATCTTTAATTaGTGGAGTCATCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFQQIFN*WSHLMH
Trigger: ATGCATAAGATGACTCCACCAATTAAAGATCTGCTG...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGACACACAGACGGAACTaGCGCTCCCAAGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVTHRRN*RSQELP
Trigger: CGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGT...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487698.5
CDS-3UTR CCA 90 bp AGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTAGAAGTGATGGGTTCCTaGGTTGCTAATCCGGAATAC +
Preference number: 4 (lower is better)
Translates to: SLESSEVMGSWVANPEYVEVMGS*VANPEY
Trigger: GTATTCCGGATTAGCAACCCAGGAACCCATCACTTC...TACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCCCGAGCTGCCAACATaGCTCCCAACTGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIPELPT*LPTVTR
Trigger: TCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTGCTTCAATATCTTCGTaGGTCTTGGCGATCTTCGCC +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGASISS*VLAIFA
Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATTGAAGC...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAGCTTCAATATCTTCGTaGGTCTTGGCGATCTTCGCC +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTASISS*VLAIFA
Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATTGAAGC...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGTTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLFSCSN*CHVSSK
Trigger: TTTGCTGGATACGTGACATCAATTGCTGCAACTGAA...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIRIPYF*AWGCSR
Trigger: CCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCT...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCGTGCTTCCACCCATCTaGCTAGCTGGTGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIVLPPI*LAGVSS
Trigger: GGATGAAACACCAGCTAGTCAGATGGGTGGAAGCAC...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTCCCACCGCCAAGCCTaGAGCTGTTCAGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMSHRQA*SCSGVI
Trigger: TATGACTCCTGAACAGCTTCAGGCTTGGCGGTGGGA...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGAGGCAAGTATGGTTTaGCTCGTTTGCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPEASMV*LVCQEH
Trigger: ATGCTCTTGGCAAACGAGTCAAACCATACTTGCCTC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGGGGGGAGCTCTAGTGTaGGAAACAGTTTCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVGGALV*ETVSQG
Trigger: CCCTTGAGAAACTGTTTCTCACACTAGAGCTCCCCC...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp ATTACCATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: ITICKRIKTLWGNYHGPPQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...AGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: LESSEVMGSWVANPEYVHQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: HSLESSEVMGSWVANPEYSFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACCGTATCCAGCAAATCTaGTGTCACTTCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: LESSEVMGSWVANPEYVHRIQQI*CHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACG...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 4 (lower is better)
Translates to: QHSLESSEVMGSWVANPEYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp GGGAAAGAATTACCATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGTTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GKELPSAKGSRRSGEIIMFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...CATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGTAATTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAAATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: QHSLESSEVMGSWVANPEIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGTCTCGCTTCCCTTTaGACGACCTGGTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRISLASL*TTWCLI
Trigger: GATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACT...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCGCCCATCCACTTCCATaGCCAGGAGTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPAHPLP*PGVSLS
Trigger: AGAGAGAGATACTCCTGGGCATGGAAGTGGATGGGC...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTGCAATAAAGAAGGAATaGCCAGGGCAGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: LSISGLMVEIIVARPAAFAIKKE*PGQRLQ
Trigger: TTGTAGCCTCTGCCCTGGGCATTCCTTCTTTATTGC...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGGTCCGAACTTTCTGCTaGTCATCCACAAGACCATGT +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMVRTFC*SSTRPC
Trigger: ACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGAC...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAGAAATCAAGTCAGCTaGCTGTTGCCTAACTTTAGC +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFRNQVS*LLPNFS
Trigger: GCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGTGCTCCAAGAATGCTaGCCAATACTTCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPVLQEC*PILQGT
Trigger: AGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCAC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTAGGGCCAATGGCCTTTaGAATATAACCAAATGTGTT +
Preference number: 4 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSRANGL*NITKCV
Trigger: AACACATTTGGTTATATTGCAAAGGCCATTGGCCCT...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCACCCCAAGTGACATGTaGTGTACCACTGCACTAGCC +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPTPSDM*CTTALA
Trigger: GGCTAGTGCAGTGGTACAGCACATGTCACTTGGGGT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTGATTCTTGGGTAATGTaGTATGAGAGCGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVDSWVM*YESVLG
Trigger: TCCCAGGACGCTCTCATAGCACATTACCCAAGAATC...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAGAGGGCAGGTCTCATaGACCTTTGCATCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMRGQVS*TFASPA
Trigger: TGCAGGGGATGCAAAGGTGCATGAGACCTGCCCTCT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTGCTGCACCTACTTTGTTTGCCAACTCCACAGTAGTATCAACTAACTGTCGGTGTAACAGTCTCCTTTaGTCCACAATGCCACTACAA +
Preference number: 4 (lower is better)
Translates to: SAAPTLFANSTVVSTNCRCNSLL*STMPLQ
Trigger: TTGTAGTGGCATTGTGGAGCAAAGGAGACTGTTACA...CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATCTAGTGGTACTTGGTaGTCACAGGGCACTGTACAA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSSGTW*SQGTVQ
Trigger: TTGTACAGTGCCCTGTGAGCACCAAGTACCACTAGA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCATCCCTACTAATTCATaGAGGCTGAAAAGTCTAGTA +
Preference number: 4 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIIPTNS*RLKSLV
Trigger: TACTAGACTTTTCAGCCTGCATGAATTAGTAGGGAT...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487698.5
CDS-3UTR GCA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTACTGGGATGGGGGTGTaGTGCTGGCATCTCAATAGG +
Preference number: 4 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSITGMGV*CWHLNR
Trigger: CCTATTGAGATGCCAGCAGCACACCCCCATCCCAGT...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTTGCTCTGAGGATCAGTaGGGGGTCATCTTACACATT +
Preference number: 4 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFCSEDQ*GVILHI
Trigger: AATGTGTAAGATGACCCCGCACTGATCCTCAGAGCA...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTTACTTATTCCCTCCTaGCTACAAATCTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: REILLSKGHETMSGGIFGLLIPS*LQILTA
Trigger: GGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAA...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACTATCTTCGTGAGTCTTaGCGATCTTCGCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: HSLESSEVMGSWVANPEYYLRES*RSSPFC
Trigger: ACAAAATGGCGAAGATCGCCAAGACTCACGAAGATA...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: HSLESSEVMGSWVANPEYLGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCGTTTTGATGGAGGCTaGGACGCTGCTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFRFDGG*DAAAPL
Trigger: CAATGGAGCAGCAGCGTCCCAGCCTCCATCAAAACG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAGCTCCCGCTGGTGTGTaGCTAGGTGTAGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEAPAGV*LGVGSH
Trigger: ATGGGATCCTACACCTAGCCACACACCAGCGGGAGC...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATGGTGTCGCATGGCCTaGTGTATCACCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEWCRMA*CITSSR
Trigger: CCTGGACGAGGTGATACACCAGGCCATGCGACACCA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCTGTTTTTACGAGCACTaGAAGTTGCGCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETCFYEH*KLRLHG
Trigger: GCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACA...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATCCAGGGGTCAGAACTaGAGTGCTTCCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSRGQN*SASTHL
Trigger: CAGATGGGTGGAAGCACTCCAGTTCTGACCCCTGGA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGGCTGGTGTGCCAATTaGTGTCTTTCCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQGWCAN*CLSRGQ
Trigger: CTGACCCCTGGAAAGACACCAATTGGCACACCAGCC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTGGCTGGTGTGCCAATTaGTGTCTTTCCAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVGWCAN*CLSRGQ
Trigger: CTGACCCCTGGAAAGACACCAATTGGCACACCAGCC...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVSHVHG*CANWCL
Trigger: AAGACACCAATTGGCACACCAGCCATGAACATGGCT...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETTTQRC*SSCQLS
Trigger: CGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGT...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTCATCATGAGGGCCAATaGCCTTTGCAATATAACCAA +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFHHEGQ*PLQYNQ
Trigger: TTGGTTATATTGCAAAGGCCATTGGCCCTCATGATG...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAAGTTCTTGGTCACTACTaGCATTTACTGTTTAACATC +
Preference number: 4 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQVLGHY*HLLFNI
Trigger: GATGTTAAACAGTAAATGCCAGTAGTGACCAAGAAC...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTGAATGCAGACAGGACTaGCATATAGCAGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVECRQD*HIAVLL
Trigger: CAGCAGTACTGCTATATGCCAGTCCTGTCTGCATTC...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
3UTR CAA 72 bp ATACCAGTGTGTCTCGCTTGCCAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAGGGCAATAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: IPVCLACQDFLL*HTAFKKGNKEG
Trigger: TCCTTCTTTATTGCCCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp TTAACACAGAATCAAAAGATTCGATACCATAAGGAGTaGCTGCTTCAGCCAAGGCAGCAATGGCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LTQNQKIRYHKE*LLQPRQQWPKH
Trigger: GTGCTTTGGCCATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCGAATCTTTTGATTCTGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTATTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLESSEVMGSWVANPEYVFSCSN*CHVSSK
Trigger: TTTGCTGGATACGTGACATCAATTGCTGCAACTGAA...TACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR TCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTAGGATCCCATATTTTTaGGCCTGGGGTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVRIPYF*AWGCSR
Trigger: CCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCT...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCTCAATAGCGGTTCAATaGCCACGAGGATCTTATGCA +
Preference number: 4 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVSIAVQ*PRGSYA
Trigger: TGCATAAGATCCTCGTGGTCATTGAACCGCTATTGA...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAGCCGTTCAACATTACTaGGTCCTCTGTAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTAVQHY*VLCSLF
Trigger: GAACAGACTACAGAGGACTCAGTAATGTTGAACGGC...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCGAGTACTGTAAAGGGTaGACATGTTTCTGCAACAAT +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPEYCKG*TCFCNN
Trigger: ATTGTTGCAGAAACATGTTCACCCTTTACAGTACTC...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTTTGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTCTGTTGACTGTGGTAAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: SLEVCAQQMDHTVLLTVVSFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...TACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp AGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTAATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: SLESSEVMGSWVANPEYVIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...TACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGTTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCTTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQIFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGCCCATCCACTTCCATaGCCAGGAGTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQAHPLP*PGVSLS
Trigger: AGAGAGAGATACTCCTGGGCATGGAAGTGGATGGGC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAGGACTTCTTGCTTTTaGACACAGCTTTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFRTSCF*TQLLRR
Trigger: CCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCCAGTGTGTCTCGCTTaGCAGGACTTCTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIPVCLA*QDFLLL
Trigger: CAAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTGTCCGAACTTTCTGCTaGTCATCCACAAGACCATGT +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGVRTFC*SSTRPC
Trigger: ACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGAC...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCTACAATGGCCTTCAGTaGTCCAAGAATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETYNGLQ*SKNAAQ
Trigger: TTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTA...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTCCTCATCCACTCTCTTaGAGATACATATTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSISGLMVEIIVARPAAFPHPLS*RYIFSS
Trigger: GGAGCTGAATATGTATCTGCAAGAGAGTGGATGAGG...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAGGGCCAATGGCCTTTaGAATATAACCAAATGTGTT +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFRANGL*NITKCV
Trigger: AACACATTTGGTTATATTGCAAAGGCCATTGGCCCT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCACCCCAAGTGACATGTaGTGTACCACTGCACTAGCC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFTPSDM*CTTALA
Trigger: GGCTAGTGCAGTGGTACAGCACATGTCACTTGGGGT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTCCTAGACATTTTAGCTaGTGCCACTGTGTATTATCA +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFPRHFS*CHCVLS
Trigger: TGATAATACACAGTGGCAGCAGCTAAAATGTCTAGG...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTCCTTTGCTCCACAATaGCACTACAAAGCCTATTTT +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSFAPQ*HYKAYF
Trigger: AAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGGAGGATGTGTTGAACTaGACCCTTAAGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMEDVLN*TLKNAD
Trigger: GTCTGCATTCTTAAGGGTGCAGTTCAACACATCCTC...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTACCAACTGTCACAAGATaGTCTGAGGATCAGTGCGGG +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLPTVTR*SEDQCG
Trigger: CCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGG...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGCAGGTGAGAACACAATaGTTGAAGACCAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRQVRTQ*LKTSIP
Trigger: TGGGATGCTGGTCTTCAAGCATTGTGTTCTCACCTG...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIPVCNL*RSVLSK
Trigger: TTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAACTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GKLSWSAYAFCIHLPGLQLGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...TTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CCA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTACTCATTATGTGACCTaGAGTAGGGGTAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: LSISGLMVEIIVARPAAFTHYVT*SRGSHV
Trigger: AACATGGCTACCCCTACTCCAGGTCACATAATGAGT...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTATCGTTGTAGATTCTTaGGTAATGTGCTATGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFIVVDS*VMCYES
Trigger: GCTCTCATAGCACATTACCCAAGAATCTACAACGAT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAGAATGCAGACAGGACTaGCATATAGCAGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTECRQD*HIAVLL
Trigger: CAGCAGTACTGCTATATGCCAGTCCTGTCTGCATTC...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCCACACAGAAGCAACGTaGTGTACAAAGAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGHTEAT*CTKRCV
Trigger: GACACATCTCTTTGTACACCACGTTGCTTCTGTGTG...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTCACACAGAAGCAACGTaGTGTACAAAGAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: LSISGLMVEIIVARPAAFHTEAT*CTKRCV
Trigger: GACACATCTCTTTGTACACCACGTTGCTTCTGTGTG...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCGGATTTGAGAGCCACTaGAAACCAAAGAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGGFESH*KPKSQT
Trigger: AGTTTGGCTCTTTGGTTTCCAGTGGCTCTCAAATCC...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACCCGAGCTGCCAACATaGCTCCCAACTGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEPELPT*LPTVTR
Trigger: TCTTGTGACAGTTGGGAGCCATGTTGGCAGCTCGGG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAACGCTGCTGCTCCATTaGCGACTTTTAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVTLLLH*RLLVLQ
Trigger: CTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGT...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAACCAGGGGTCTCTGCCTaGTCCCAACTTGATAGTTTT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQPGVSA*SQLDSF
Trigger: AAAACTATCAAGTTGGGATCAGGCAGAGACCCCTGG...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TGGGACGCTGCTGCTCCATTGACGACTTTTAGTTCTCCAGCTTTAGCTTTTTCTTTCTGGACTAAGTGTTaGTTCATCAACATCAACCAA +
Preference number: 4 (lower is better)
Translates to: WDAAAPLTTFSSPALAFSFWTKC*FININQ
Trigger: TTGGTTGATGTTGATGAATCAACACTTAGTCCAGAA...AGAAAAAGCTAAAGCTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTAGCAGAGGAAGAATCTaGTTAAACAAAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVSRGRI*LNKGPA
Trigger: AGCTGGTCCTTTGTTTAATCAGATTCTTCCTCTGCT...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGTCAATAGCGGTTCAATaGCCACGAGGATCTTATGCA +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRSIAVQ*PRGSYA
Trigger: TGCATAAGATCCTCGTGGTCATTGAACCGCTATTGA...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAGAGGCAAGTATGGTTTaGCTCGTTTGCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTEASMV*LVCQEH
Trigger: ATGCTCTTGGCAAACGAGTCAAACCATACTTGCCTC...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACTTGACAAGTCTTCATaGCAACAGCAGTTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPLDKSS*QQQFEK
Trigger: TTTCTCGAACTGCTGTTGTCATGAAGACTTGTCAAG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAAGCAAGTTTAAGGTGTaGAGTAGCTGTGCATTAAAC +
Preference number: 4 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLASKFKV*SSCALN
Trigger: GTTTAATGCACAGCTACTTCACACCTTAAACTTGCT...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGCTACTTTTCTACGATaGTGGAATGGTTGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPATFLR*WNGCAS
Trigger: ACTAGCACAACCATTCCATCATCGTAGAAAAGTAGC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGCATGGAAGTACCGCTaGAAACTTCTAACAACAGAA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPAWKYR*KLLTTE
Trigger: TTCTGTTGTTAGAAGTTTTCAGCGGTACTTCCATGC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TCTGCAATCTTTGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTCTGTTGACAGAATATGGCATCTGTaGCTTCAACCACATCTATAC +
Preference number: 4 (lower is better)
Translates to: SAIFGGLCSANGSYCSVDRIWHL*LQPHLY
Trigger: GTATAGATGTGGTTGAAGTCACAGATGCCATATTCT...GTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR TCA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCAGGGGGAGCTCTAGTGTaGGAAACAGTTTCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSGGALV*ETVSQG
Trigger: CCCTTGAGAAACTGTTTCTCACACTAGAGCTCCCCC...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAAAATTTCTCGAATCTGTaGTTCAATATCTTCGTGAGT +
Preference number: 4 (lower is better)
Translates to: QHSLESSEVMGSWVANPENFSNL*FNIFVS
Trigger: ACTCACGAAGATATTGAAGCACAGATTCGAGAAATT...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp GATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: DQDALGKLSWSAYAFCIHIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...ATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGTTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTAATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SLESSEVMGSWVANPEYVIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...TACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAAGTCTCGCTTCCCTTTaGACGACCTGGTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVESLASL*TTWCLI
Trigger: GATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATGGTCCGAACTTTCTaGTGCTCATCCACAAGACCA +
Preference number: 4 (lower is better)
Translates to: SQVLFSHYIHVSPSIHFRMVRTF*CSSTRP
Trigger: TGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCAT...CCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATGATACCATAAGGAGTTaGTGCTTCAGCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHDTIRS*CFSQGS
Trigger: GCTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATC...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTGTTTTAATGTAGTTTaGTTCTACACCATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFCFNVV*FYTICP
Trigger: GGGACAGATGGTGTAGAAGCAAACTACATTAAAACA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTTGCACCTACTTTGTTTaGCAACTCCACAGTAGTATC +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVCTYFV*QLHSSI
Trigger: GATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCA...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAATGCACCTACTTTGTTTaGCAACTCCACAGTAGTATC +
Preference number: 4 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKCTYFV*QLHSSI
Trigger: GATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCA...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTAAGTCAGCTGCCTGTTaGCTAACTTTAGCAGATTTG +
Preference number: 4 (lower is better)
Translates to: LSISGLMVEIIVARPAAFKSAAC*LTLADL
Trigger: CAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTT...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTGCTGCACCTACTTTGTTTGCCAACTCCACAGTAGTATCAACTAACTGTCGGGGTGGAGTCATCTTATaGATACCTATGACATTTACA +
Preference number: 4 (lower is better)
Translates to: SAAPTLFANSTVVSTNCRGGVIL*IPMTFT
Trigger: TGTAAATGTCATAGGTATGCATAAGATGACTCCACC...CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTGCAACAATAGCTATTaGTACAGTGGTACAAACTCT +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFCNNSY*YSGTNS
Trigger: AGAGTTTGTACCACTGTAGCAATAGCTATTGTTGCA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACATGTGCTGTACCACTaGACTAGCCGTCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEHVLYH*TSRLSV
Trigger: CACAGACAGACGGCTAGTGCAGTGGTACAGCACATG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAATCTAGTGGTACTTGGTaGTCACAGGGCACTGTACAA +
Preference number: 4 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQSSGTW*SQGTVQ
Trigger: TTGTACAGTGCCCTGTGAGCACCAAGTACCACTAGA...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TCTGCAATCTTTGGAGGTCTGTGCTCAGCAAATGGATCATACTGTTCTGTTGACGAAAGAATTACCATCTaGAAAAGGATCAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: SAIFGGLCSANGSYCSVDERITI*KRIKTL
Trigger: GAGCGTCTTGATCCTTTTGCAGATGGTAATTCTTTC...GTCAACAGAACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp TGGGACGCTGCTGCTCCATTGACGACTTTTAGTTCTCCAGCTTTAGCTTTTTCTATCCCTACTAATTCATaGAGGCTGAAAAGTCTAGTA +
Preference number: 4 (lower is better)
Translates to: WDAAAPLTTFSSPALAFSIPTNS*RLKSLV
Trigger: TACTAGACTTTTCAGCCTGCATGAATTAGTAGGGAT...AGAAAAAGCTAAAGCTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATAGAGGATGTGTTGAACTaGACCCTTAAGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIEDVLN*TLKNAD
Trigger: GTCTGCATTCTTAAGGGTGCAGTTCAACACATCCTC...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCAGGTGAGAACACAATaGTTGAAGACCAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIQVRTQ*LKTSIP
Trigger: TGGGATGCTGGTCTTCAAGCATTGTGTTCTCACCTG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTACCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLPVCNL*RSVLSK
Trigger: TTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGG...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTGTTTTTACGAGCACTaGAAGTTGCGCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFCFYEH*KLRLHG
Trigger: GCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGTGATTTTCTTTTACTaGCTCCAGGAGTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPVIFFY*LQESVF
Trigger: AAACACCGACTCCTGGAGCCAGTAAAAGAAAATCAC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQTTQRC*SSCQLS
Trigger: CGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTACCACCCAAAGGTGTTaGAGTAGCTGTCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVTTQRC*SSCQLS
Trigger: CGAAAGCTGACAGCTACTCCAACACCTTTGGGTGGT...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCGATCTGAGGCAAGTATaGTTTGACTCGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQIDLRQV*FDSFAK
Trigger: CTTGGCAAACGAGTCAAACCATACTTGCCTCAGATC...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTCGAATAGCCTTTTTGTaGGCTTTTAAGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: REILLSKGHETMSGGIFGRIAFL*AFKSSK
Trigger: TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCG...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGGAAGTGATGGGTTCCTaGGTTGCTAATCCGGAATAC +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVEVMGS*VANPEY
Trigger: GTATTCCGGATTAGCAACCCAGGAACCCATCACTTC...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487698.5
CDS-3UTR CCA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAAGATGTGTCAGTCTCTTaGTTAAAGTTTCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: QHSLESSEVMGSWVANPEDVSVS*LKFQYL
Trigger: CAAATACTGAAACTTTAACCAAGAGACTGACACATC...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487698.5
3UTR CAA 72 bp TATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAAATGGATCATACTGTT +
Preference number: 4 (lower is better)
Translates to: YAFCIHLPGLQS*EVCAQQMDHTV
Trigger: AACAGTATGATCCATTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGTTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMFSCSN*CHVSSK
Trigger: TTTGCTGGATACGTGACATCAATTGCTGCAACTGAA...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR TCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCTATCCTGGCTTCTTCTaGCCAAGCAAACTCGTAGAT +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPYPGFF*PSKLVD
Trigger: ATCTACGAGTTTGCTTGGTCAGAAGAAGCCAGGATA...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTGTTTCATCCCACCGTaGTTTTCTTTTACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDCFIPP*FSFTGS
Trigger: GGAGCCAGTAAAAGAAAATCACGGTGGGATGAAACA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCTGTTTCATCCCACCGTaGTTTTCTTTTACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPCFIPP*FSFTGS
Trigger: GGAGCCAGTAAAAGAAAATCACGGTGGGATGAAACA...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACAATGGCCAAAGCACTaGTGGTCCGAACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEQWPKH*WSELSA
Trigger: AGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGCCGTTCAACATTACTaGGTCCTCTGTAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQAVQHY*VLCSLF
Trigger: GAACAGACTACAGAGGACTCAGTAATGTTGAACGGC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCCTTGACAAGTCTTCATaGCAACAGCAGTTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQILDKSS*QQQFEK
Trigger: TTTCTCGAACTGCTGTTGTCATGAAGACTTGTCAAG...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGAGTACTGTAAAGGGTaGACATGTTTCTGCAACAAT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPEYCKG*TCFCNN
Trigger: ATTGTTGCAGAAACATGTTCACCCTTTACAGTACTC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGCAAGTTTAAGGTGTaGAGTAGCTGTGCATTAAAC +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSKFKV*SSCALN
Trigger: GTTTAATGCACAGCTACTTCACACCTTAAACTTGCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTGCTACTTTTCTACGATaGTGGAATGGTTGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGATFLR*WNGCAS
Trigger: ACTAGCACAACCATTCCATCATCGTAGAAAAGTAGC...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGCATGGAAGTACCGCTaGAAACTTCTAACAACAGAA +
Preference number: 4 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMAWKYR*KLLTTE
Trigger: TTCTGTTGTTAGAAGTTTTCAGCGGTACTTCCATGC...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR TCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCGCATGGAAGTACCGCTaGAAACTTCTAACAACAGAA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETAWKYR*KLLTTE
Trigger: TTCTGTTGTTAGAAGTTTTCAGCGGTACTTCCATGC...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGATTCTCAGTCATTACTaGAGGTCATTTGACATCAAC +
Preference number: 4 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMILSHY*RSFDIN
Trigger: GTTGATGTCAAATGACCTTCAGTAATGACTGAGAAT...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGAGACATTTCCTATGCTaGAGATCATGCCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMRHFLC*RSCPIG
Trigger: ACCAATTGGGCATGATCTTCAGCATAGGAAATGTCT...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR TCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTAGACATTTCCTATGCTaGAGATCATGCCCAATTGGT +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGRHFLC*RSCPIG
Trigger: ACCAATTGGGCATGATCTTCAGCATAGGAAATGTCT...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGTTCTACCAGTTATTATaGTGCACACAGAAGCAACGT +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMFYQLL*CTQKQR
Trigger: ACGTTGCTTCTGTGTGCATCATAATAACTGGTAGAA...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR TCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTACCAAAGAGCCAAACTaGACCTATGTGGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVTKEPN*TYVAAT
Trigger: AGTTGCAGCCACATAGGTTCAGTTTGGCTCTTTGGT...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATTATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 4 (lower is better)
Translates to: DQDALGKLSWSAYAFCIHYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...ATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATTCATCTTCCCGGTCTaGAATCTTTGGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQFIFPV*NLWRSV
Trigger: CACAGACCTCCAAAGATTGCAGACCGGGAAGATGAA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGGTTTTCCCTCCATCTaGAAAAGGATCAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQGFPSI*KRIKTL
Trigger: GAGCGTCTTGATCCTTTTGCAGATGGAGGGAAAACC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335508.11
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCACCACGAGGATCTTATaGACATATGGACGAACTAAG +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETTTRIL*TYGRTK
Trigger: CTTAGTTCGTCCATATGTGCATAAGATCCTCGTGGT...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCCAGACCAGCAGCCTTTaGCAAATTAGAAATGATCTC +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETQTSSL*QIRNDL
Trigger: GAGATCATTTCTAATTTGGCAAAGGCTGCTGGTCTG...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAAAGGACTTCTTGCTTTTaGACACAGCTTTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKRTSCF*TQLLRR
Trigger: CCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCT...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCCTTGCCAGGACTTCTTaGTTTTGCACACAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQILARTS*FCTQLL
Trigger: TAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAG...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGTCCGAACTTTCTGCTaGTCATCCACAAGACCATGT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQVRTFC*SSTRPC
Trigger: ACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGAC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAATGGTCCGAACTTTCTaGTGCTCATCCACAAGACCA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQMVRTF*CSSTRP
Trigger: TGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCAT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAACCATAAGGAGTTGCTaGTTCAGCCAAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQTIRSC*FSQGSN
Trigger: ATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATGGT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCTCCAAAGCCATCCTGTaGTGCCAGAAGTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETSKAIL*CQKCLK
Trigger: TTTTAAACACTTCTGGCAGCACAGGATGGCTTTGGA...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACATCCAAAGCCATCCTGTaGTGCCAGAAGTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTSKAIL*CQKCLK
Trigger: TTTTAAACACTTCTGGCAGCACAGGATGGCTTTGGA...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCAGAAATCAAGTCAGCTaGCTGTTGCCTAACTTTAGC +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQIRNQVS*LLPNFS
Trigger: GCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCT...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTAGTGCTCCAAGAATGCTaGCCAATACTTCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLVLQEC*PILQGT
Trigger: AGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCAC...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTCAGTGCTCCAAGAATaGTGCCCAATACTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHSVLQE*CPILQG
Trigger: ACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGA...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATACAATGGCCTTCAGTaGTCCAAGAATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQYNGLQ*SKNAAQ
Trigger: TTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGATTCTTGGGTAATGTaGTATGAGAGCGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQDSWVM*YESVLG
Trigger: TCCCAGGACGCTCTCATAGCACATTACCCAAGAATC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAAAGACATTTTAGCTGCTaGCACTGTGTATTATCACAG +
Preference number: 4 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKRHFSC*HCVLSQ
Trigger: CTGTGATAATACACAGTGGCAGCAGCTAAAATGTCT...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCTGTAACAGTCTCCTTTaGTCCACAATGCCACTACAA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETCNSLL*STMPLQ
Trigger: TTGTAGTGGCATTGTGGAGCAAAGGAGACTGTTACA...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCGAAAGAATTACCATCTaGAAAAGGATCAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGERITI*KRIKTL
Trigger: GAGCGTCTTGATCCTTTTGCAGATGGTAATTCTTTC...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGATACGTACACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVIRTLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGTACGTAT...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487698.5
CDS-3UTR GCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTCCCTCACTTTCGTaGCTTTGTCTCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHFPSLS*LCLHQQ
Trigger: CTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAA...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCAAACCTTTAACCCTTTaGGTTTCTATGGCATTGGCT +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGKPLTL*VSMALA
Trigger: AGCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTT...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGCCCCTTGTGCTGACTTaGACACTAAAATTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMPLVLT*TLKLAK
Trigger: TTTTGCTAATTTTAGTGTGCAAGTCAGCACAAGGGG...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCCACAGAGGCACACTATaGTTTAGAAATGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGHRGTL*FRNVVT
Trigger: AGTTACCACATTTCTAAAGCATAGTGTGCCTCTGTG...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp AATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTTATCTTCGTGAGTCTTaGCGATCTTCGCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: NYHGPPMLFVFIFPVCNLYLRES*RSSPFC
Trigger: ACAAAATGGCGAAGATCGCCAAGACTCACGAAGATA...AAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACCGGTCTGCAATCTTTaGAGGTCTGTGCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEPVCNL*RSVLSK
Trigger: TTTGCTGAGCACAGACCTCCAAAGATTGCAGACCGG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVRIKTL*GNYHGP
Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGTATCTCTCTCTGTTTTaGGGGTTTCATCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRYLSLF*GFHPIC
Trigger: ACAGATGGGATGAAACCCCCAAAACAGAGAGAGATA...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSHVHG*CANWCL
Trigger: AAGACACCAATTGGCACACCAGCCATGAACATGGCT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATGCAGCCTTTCTCATTaGTGGTGTTCCATTCTTAAT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPCSLSH*WCSILN
Trigger: ATTAAGAATGGAACACCACCAATGAGAAAGGCTGCA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAACCCTTTCCTCTGTGTTaGCGGATACCCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQPFPLC*RIPFHK
Trigger: TTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGG...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCCATCATGAGGGCCAATaGCCTTTGCAATATAACCAA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETHHEGQ*PLQYNQ
Trigger: TTGGTTATATTGCAAAGGCCATTGGCCCTCATGATG...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTTACACATTTTCACAGCTTACTCTCCCCAGGACTTATGCGGAGCTTTACCCGGGAACCAATGTAGATaGAGTTGTAAATTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ILHIFTAYSPQDLCGALPGNQCR*SCKFSN
Trigger: ATTGGAAAATTTACAACTCCATCTACATTGGTTCCC...GGGTAAAGCTCCGCATAAGTCCTGGGGAGAGTAAGCTGTGAAAATGTGTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATCATCTAGTGGTACTTaGTGCTCACAGGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSSSGT*CSQGTV
Trigger: TACAGTGCCCTGTGAGCACCAAGTACCACTAGATGA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTGATGTGTCAGTCTCTTaGTTAAAGTTTCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFDVSVS*LKFQYL
Trigger: CAAATACTGAAACTTTAACCAAGAGACTGACACATC...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAGTCTGGAGGCATTTTTaGTTATTACACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTVWRHF*LLHWDG
Trigger: CCCATCCCAGTGTAATAACCAAAAATGCCTCCAGAC...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ACTCTGTATTCATTCATTAAGGCAGGGAGTACTGTAAAGGGTGAACATGTTTCTGTCTGGAGGCATTTTTaGTTATTACACTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TLYSFIKAGSTVKGEHVSVWRHF*LLHWDG
Trigger: CCCATCCCAGTGTAATAACCAAAAATGCCTCCAGAC...AGAAACATGTTCACCCTTTACAGTACTCCCTGCCTTAATGAATGAATACAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIAAFLP*ISRICA
Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414174.1
ENST00000487698.5
ENST00000652026.1
CDS-3UTR TCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCTTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPFSCSN*CHVSSK
Trigger: TTTGCTGGATACGTGACATCAATTGCTGCAACTGAA...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTGTTTCATCCCACCGTaGTTTTCTTTTACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFCFIPP*FSFTGS
Trigger: GGAGCCAGTAAAAGAAAATCACGGTGGGATGAAACA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCGCCGTTCAACATTACTaGGTCCTCTGTAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIAVQHY*VLCSLF
Trigger: GAACAGACTACAGAGGACTCAGTAATGTTGAACGGC...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR TCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGAGTACTGTAAAGGGTaGACATGTTTCTGCAACAAT +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIREYCKG*TCFCNN
Trigger: ATTGTTGCAGAAACATGTTCACCCTTTACAGTACTC...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATCCAATATACATCTCTaGCTTTCCGGGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVESNIHL*LSGLGE
Trigger: TTCACCCAGCCCGGAAAGTCAGAGATGTATATTGGA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTAGCAAGTTTAAGGTGTaGAGTAGCTGTGCATTAAAC +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGSKFKV*SSCALN
Trigger: GTTTAATGCACAGCTACTTCACACCTTAAACTTGCT...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCAACCATAGAGAGCAGTaGGATTTAAAGTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETNHREQ*DLKLHG
Trigger: TCCATGCAACTTTAAATCTCACTGCTCTCTATGGTT...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAAGAATATGGCATCTGTaGCTTCAACCACATCTATAC +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTRIWHL*LQPHLY
Trigger: GTATAGATGTGGTTGAAGTCACAGATGCCATATTCT...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR TCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTAGAATATGGCATCTGTaGCTTCAACCACATCTATAC +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGRIWHL*LQPHLY
Trigger: GTATAGATGTGGTTGAAGTCACAGATGCCATATTCT...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR TCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTACCAAAGAGCCAAACTaGACCTATGTGGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSTKEPN*TYVAAT
Trigger: AGTTGCAGCCACATAGGTTCAGTTTGGCTCTTTGGT...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGAATTACCATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGAATTTCTCGAATCTGTaGTTCAATATCTTCGTGAGT +
Preference number: 4 (lower is better)
Translates to: RITICKRIKTLWGNYHGPNFSNL*FNIFVS
Trigger: ACTCACGAAGATATTGAAGCACAGATTCGAGAAATT...CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCGTATCCAGCAAATCTaGTGTCACTTCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRIRIQQI*CHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGTATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGTATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 4 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp AGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: SQVLFSHYIHVSPSIHFRIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...CCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: NYHGPPMLFVFIFPVCNLIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...AAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATGTTCATGGCTGGTGTaGCAATTGGTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVECSWLV*QLVSFQ
Trigger: CTGGAAAGACACCAATTGGCACACCAGCCATGAACA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGTAATCTGACGCAATaGAGCCTTTCTCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSNLTQ*SLSHWW
Trigger: CCACCAATGAGAAAGGCTGCATTGCGTCAGATTACT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACCTTGCCAGGACTTCTTaGTTTTGCACACAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDLARTS*FCTQLL
Trigger: TAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAG...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCGTAGTTGGCATATTCTaGATCCATAAGAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGVVGIF*IHKRNK
Trigger: CTTATTCCTCTTATGGATGCAGAATATGCCAACTAC...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACACCTGGATATAATTTCTaGTGCACCTACTTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTPGYNF*CTYFVC
Trigger: GCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGG...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCAGTGCTCCAAGAATGCTaGCCAATACTTCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSVLQEC*PILQGT
Trigger: AGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCAC...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCTACAATGGCCTTCAGTaGTCCAAGAATGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIYNGLQ*SKNAAQ
Trigger: TTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTA...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTACCTCATCCACTCTCTTaGAGATACATATTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLPHPLS*RYIFSS
Trigger: GGAGCTGAATATGTATCTGCAAGAGAGTGGATGAGG...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGAGAATAGAAGCCATCTaGAAAAGGATCAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: SQVLFSHYIHVSPSIHFRRIEAI*KRIKTL
Trigger: GAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCT...CCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409915.8
CDS-3UTR GCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGCACAGAGGCACACTATaGTTTAGAAATGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRHRGTL*FRNVVT
Trigger: AGTTACCACATTTCTAAAGCATAGTGTGCCTCTGTG...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCACAACCACAACAGAGTaGAGTGTGATAACAATACAG +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETTTTTE*SVITIQ
Trigger: CTGTATTGTTATCACACTGCACTCTGTTGTGGTTGT...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTAGGGGCATGATATCCTaGCTTCTTCTGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSRGMIS*LLLTKQ
Trigger: TTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCT...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QVLFSHYIHVSPSIHFRILGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...GATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVLGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCACTCATTATGTGACCTaGAGTAGGGGTAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFTHYVT*SRGSHV
Trigger: AACATGGCTACCCCTACTCCAGGTCACATAATGAGT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATATTCCTCATCAGAAAGTaGGCGATTTCTCTCATCAAT +
Preference number: 4 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIFLIRK*AISLIN
Trigger: ATTGATGAGAGAAATCGCCCACTTTCTGATGAGGAA...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ACTCTGTATTCATTCATTAAGGCAGGGAGTACTGTAAAGGGTGAACATGTTTCTAGGAACATAACCAGCTaGAGGAGGAAGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: TLYSFIKAGSTVKGEHVSRNITS*RRKYLI
Trigger: TATAAGGTACTTCCTCCTCCAGCTGGTTATGTTCCT...AGAAACATGTTCACCCTTTACAGTACTCCCTGCCTTAATGAATGAATACAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATCTTCAGTTTGCATGTaGAAACCAGTCATACCACCC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSSVCM*KPVIPP
Trigger: GGGTGGTATGACTGGTTTCCACATGCAAACTGAAGA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATGGAAGATTTCCAGATaGCTGGTCATTAACACTTTT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPWKISR*LVINTF
Trigger: AAAAGTGTTAATGACCAGCCATCTGGAAATCTTCCA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGGGTTGCAGCCTTTCTCATTaGTGGTGTTCCATTCTTAAT +
Preference number: 4 (lower is better)
Translates to: LFSHYIHVSPSIHFRIRGCSLSH*WCSILN
Trigger: ATTAAGAATGGAACACCACCAATGAGAAAGGCTGCA...ACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACAGATCTTTAATTGGTaGAGTCATCTTATGCATACC +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPQIFNW*SHLMHT
Trigger: GGTATGCATAAGATGACTCCACCAATTAAAGATCTG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGCAGCAGATCTTTAATTaGTGGAGTCATCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMQQIFN*WSHLMH
Trigger: ATGCATAAGATGACTCCACCAATTAAAGATCTGCTG...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACGAATAGCCTTTTTGTaGGCTTTTAAGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPRIAFL*AFKSSK
Trigger: TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCCGAATAGCCTTTTTGTaGGCTTTTAAGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVRIAFL*AFKSSK
Trigger: TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCG...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAATCGTTGTAGATTCTTaGGTAATGTGCTATGAGAGC +
Preference number: 4 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTIVVDS*VMCYES
Trigger: GCTCTCATAGCACATTACCCAAGAATCTACAACGAT...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCATCATCTAGTGGTACTTaGTGCTCACAGGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSSSSGT*CSQGTV
Trigger: TACAGTGCCCTGTGAGCACCAAGTACCACTAGATGA...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GGATCATACTGTTCTGTTGACTGTGGTATATCATTAAGCAATGCCACAGGGGCATCTTGTCCTTCTACCTaGAAAGAAAACTTGCATTAT +
Preference number: 4 (lower is better)
Translates to: GSYCSVDCGISLSNATGASCPST*KENLHY
Trigger: ATAATGCAAGTTTTCTTTCCAGGTAGAAGGACAAGA...TGCCCCTGTGGCATTGCTTAATGATATACCACAGTCAACAGAACAGTATGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CCA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGTGGGCCTGTGAATTCTaGCATACATGTTTAAATCAA +
Preference number: 4 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMWACEF*HTCLNQ
Trigger: TTGATTTAAACATGTATGCCAGAATTCACAGGCCCA...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAGATGTGTCAGTCTCTTaGTTAAAGTTTCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLADVSVS*LKFQYL
Trigger: CAAATACTGAAACTTTAACCAAGAGACTGACACATC...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATGAATGCAGACAGGACTaGCATATAGCAGTACATCTG +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHECRQD*HIAVHL
Trigger: CAGATGTACTGCTATATGCCAGTCCTGTCTGCATTC...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652738.1
3UTR CAA 72 bp ATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTaGTTATTTAAACGCCACAAAACTGTACCACAGATC +
Preference number: 4 (lower is better)
Translates to: IKSAACCLTLAD*LFKRHKTVPQI
Trigger: GATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAGCTTTATCAGTAATCTaGCGCAATGCAGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEALSVI*RNAAFL
Trigger: GAGAAAGGCTGCATTGCGTCAGATTACTGATAAAGC...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGCAGAGGAAGAATCTaGTTAAACAAAGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSRGRI*LNKGPA
Trigger: AGCTGGTCCTTTGTTTAATCAGATTCTTCCTCTGCT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAACTTGACAAGTCTTCATaGCAACAGCAGTTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQLDKSS*QQQFEK
Trigger: TTTCTCGAACTGCTGTTGTCATGAAGACTTGTCAAG...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTTACTGATGCATTGCTaGGTAGTGGCTTATAACATG +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDLLMHC*VVAYNM
Trigger: CATGTTATAAGCCACTACTCAGCAATGCATCAGTAA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGGTTAGTATGGGCCTGTaGATTCTGGCATACATGTTT +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMVSMGL*ILAYMF
Trigger: AAACATGTATGCCAGAATTCACAGGCCCATACTAAC...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAACAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQQELPS*LEFLES
Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSISFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMSFIKS*LLALNF
Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCAGACCAGCAGCCTTTaGCAAATTAGAAATGATCTC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFQTSSL*QIRNDL
Trigger: GAGATCATTTCTAATTTGGCAAAGGCTGCTGGTCTG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATGCACCTACTTTGTTTaGCAACTCCACAGTAGTATC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQCTYFV*QLHSSI
Trigger: GATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCCCTGGATATAATTTCTaGTGCACCTACTTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPPGYNF*CTYFVC
Trigger: GCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGG...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTATGATCAATATCTGCTaGTCCCAAATTACCCATAAT +
Preference number: 4 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVMINIC*SQITHN
Trigger: ATTATGGGTAATTTGGGAGCAGCAGATATTGATCAT...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATAGAAATCAAGTCAGCTaGCTGTTGCCTAACTTTAGC +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHRNQVS*LLPNFS
Trigger: GCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCT...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACCTCATCCACTCTCTTaGAGATACATATTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEPHPLS*RYIFSS
Trigger: GGAGCTGAATATGTATCTGCAAGAGAGTGGATGAGG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGTGCAACAATAGCTATTaGTACAGTGGTACAAACTCT +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRCNNSY*YSGTNS
Trigger: AGAGTTTGTACCACTGTAGCAATAGCTATTGTTGCA...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAACCTAGACATTTTAGCTaGTGCCACTGTGTATTATCA +
Preference number: 4 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQPRHFS*CHCVLS
Trigger: TGATAATACACAGTGGCAGCAGCTAAAATGTCTAGG...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCTCCTTTGCTCCACAATaGCACTACAAAGCCTATTTT +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPSFAPQ*HYKAYF
Trigger: AAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGA...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATGTAACAGTCTCCTTTaGTCCACAATGCCACTACAA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQCNSLL*STMPLQ
Trigger: TTGTAGTGGCATTGTGGAGCAAAGGAGACTGTTACA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGGAAAGAATTACCATCTaGAAAAGGATCAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVERITI*KRIKTL
Trigger: GAGCGTCTTGATCCTTTTGCAGATGGTAATTCTTTC...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTATCTTCGTGAGTCTTaGCGATCTTCGCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFYLRES*RSSPFC
Trigger: ACAAAATGGCGAAGATCGCCAAGACTCACGAAGATA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTATATCTTCGTGAGTCTTaGCGATCTTCGCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVYLRES*RSSPFC
Trigger: ACAAAATGGCGAAGATCGCCAAGACTCACGAAGATA...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFLGKLS*SAYAFC
Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAGTGATTTTCTTTTACTaGCTCCAGGAGTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVVIFFY*LQESVF
Trigger: AAACACCGACTCCTGGAGCCAGTAAAAGAAAATCAC...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTAAGGAACATAACCAGCTaGAGGAGGAAGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLRNITS*RRKYLI
Trigger: TATAAGGTACTTCCTCCTCCAGCTGGTTATGTTCCT...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGATTTCCAGATGGCTaGTCATTAACACTTTTCATA +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPRFPDG*SLTLFI
Trigger: TATGAAAAGTGTTAATGACCAGCCATCTGGAAATCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGCCTTTCTCATTGGTaGTGTTCCATTCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSLSHW*CSILNF
Trigger: AAAATTAAGAATGGAACACCACCAATGAGAAAGGCT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGCAAGGCACAGGACAGCACCCCCACAATAATGAATTATTTGATTCAAGATGTCAGCCTTTCTCATTGGTaGTGTTCCATTCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: CKAQDSTPTIMNYLIQDVSLSHW*CSILNF
Trigger: AAAATTAAGAATGGAACACCACCAATGAGAAAGGCT...GACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATCATGAGGGCCAATaGCCTTTGCAATATAACCAA +
Preference number: 4 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSIHHEGQ*PLQYNQ
Trigger: TTGGTTATATTGCAAAGGCCATTGGCCCTCATGATG...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAAATCGTTGTAGATTCTTaGGTAATGTGCTATGAGAGC +
Preference number: 4 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQIVVDS*VMCYES
Trigger: GCTCTCATAGCACATTACCCAAGAATCTACAACGAT...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAAAGACCTGTCAAGTGTTaGACAAGACTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQRPVKC*TRLKPL
Trigger: AAGTGGTTTAAGTCTTGTCCAACACTTGACAGGTCT...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCGTTACAAATCCAACTTaGAAACCCTTAATGCTCACT +
Preference number: 4 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQIVTNPT*KPLMLT
Trigger: AGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAAC...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTGGATTTGAGAGCCACTaGAAACCAAAGAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSGFESH*KPKSQT
Trigger: AGTTTGGCTCTTTGGTTTCCAGTGGCTCTCAAATCC...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp AAGGCACAGGACAGCACCCCCACAATAATGAATTATTaGATTCAAGATGTCAATAATGCCAAGGTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KAQDSTPTIMNY*IQDVNNAKVEK
Trigger: TTTCTCAACCTTGGCATTATTGACATCTTGAATCAAATAATTCATTATTGTGGGGGTGCTGTCCTGTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEFSCSN*CHVSSK
Trigger: TTTGCTGGATACGTGACATCAATTGCTGCAACTGAA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTTTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSFSCSN*CHVSSK
Trigger: TTTGCTGGATACGTGACATCAATTGCTGCAACTGAA...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTTCTGGACTAAGTGTTaGTTCATCAACATCAACCAA +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDFWTKC*FININQ
Trigger: TTGGTTGATGTTGATGAATCAACACTTAGTCCAGAA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAACCATAGAGAGCAGTaGGATTTAAAGTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFNHREQ*DLKLHG
Trigger: TCCATGCAACTTTAAATCTCACTGCTCTCTATGGTT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTAACCATAGAGAGCAGTaGGATTTAAAGTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVNHREQ*DLKLHG
Trigger: TCCATGCAACTTTAAATCTCACTGCTCTCTATGGTT...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTTCTACCAGTTATTATaGTGCACACAGAAGCAACGT +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMFYQLL*CTQKQR
Trigger: ACGTTGCTTCTGTGTGCATCATAATAACTGGTAGAA...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGAATTTCTCGAATCTGTaGTTCAATATCTTCGTGAGT +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRNFSNL*FNIFVS
Trigger: ACTCACGAAGATATTGAAGCACAGATTCGAGAAATT...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACGTATCCAGCAAATCTaGTGTCACTTCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVERIQQI*CHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCCGTATCCAGCAAATCTaGTGTCACTTCCACCATAAA +
Preference number: 4 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIRIQQI*CHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACG...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR GCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTATCTTTGGAGGTCTGTaGTCAGCAAATGGATCATAC +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSIFGGL*SANGSY
Trigger: GTATGATCCATTTGCTGAGCACAGACCTCCAAAGAT...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMIMVRL*FLYSSS
Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCGTTCGATCTTCAGTTTaGATGTGGAAACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFVRSSV*MWKPVI
Trigger: TATGACTGGTTTCCACATGCAAACTGAAGATCGAAC...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAACCACGAGGATCTTATaGACATATGGACGAACTAAG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVETTRIL*TYGRTK
Trigger: CTTAGTTCGTCCATATGTGCATAAGATCCTCGTGGT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGGACTTCTTGCTTTTaGACACAGCTTTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFRTSCF*TQLLRR
Trigger: CCTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCCTGGATATAATTTCTaGTGCACCTACTTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFPGYNF*CTYFVC
Trigger: GCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAAAGTCAGCTGCCTGTTaGCTAACTTTAGCAGATTTG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEKSAAC*LTLADL
Trigger: CAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp TTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATAGACATTTTAGCTGCTaGCACTGTGTATTATCACAG +
Preference number: 4 (lower is better)
Translates to: FFSQVLFSHYIHVSPSIHRHFSC*HCVLSQ
Trigger: CTGTGATAATACACAGTGGCAGCAGCTAAAATGTCT...ATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTATCCTTTGCTCCACAATaGCACTACAAAGCCTATTTT +
Preference number: 4 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVSFAPQ*HYKAYF
Trigger: AAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGA...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTTATCTCTCTCTGTTTTaGGGGTTTCATCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSYLSLF*GFHPIC
Trigger: ACAGATGGGATGAAACCCCCAAAACAGAGAGAGATA...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATTCCTCATCAGAAAGTaGGCGATTTCTCTCATCAAT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQFLIRK*AISLIN
Trigger: ATTGATGAGAGAAATCGCCCACTTTCTGATGAGGAA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAAGGAACATAACCAGCTaGAGGAGGAAGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVERNITS*RRKYLI
Trigger: TATAAGGTACTTCCTCCTCCAGCTGGTTATGTTCCT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGAGATTTCCAGATGGCTaGTCATTAACACTTTTCATA +
Preference number: 4 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRRFPDG*SLTLFI
Trigger: TATGAAAAGTGTTAATGACCAGCCATCTGGAAATCT...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACTGGAAGATTTCCAGATaGCTGGTCATTAACACTTTT +
Preference number: 4 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDWKISR*LVINTF
Trigger: AAAAGTGTTAATGACCAGCCATCTGGAAATCTTCCA...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTATCCTCATCAGGAGACTaGAATTCTCGAATAAGGATT +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLSSSGD*NSRIRI
Trigger: AATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGA...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCATGTCTCAAATACATTaGGCCATACATAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: WLVINTFHSSIFSLHVETMSQIH*AIHSST
Trigger: TGTTGAACTATGTATGGCCCAATGTATTTGAGACAT...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATTGCAACATTCTACATaGTCCAATAGCAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQLQHST*SNSNSQ
Trigger: CTGAGAGTTGCTATTGGACCATGTAGAATGTTGCAA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTTGCAACATTCTACATaGTCCAATAGCAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMLQHST*SNSNSQ
Trigger: CTGAGAGTTGCTATTGGACCATGTAGAATGTTGCAA...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATAGGGAACCAATGTAGATaGAGTTGTAAATTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIGNQCR*SCKFSN
Trigger: ATTGGAAAATTTACAACTCCATCTACATTGGTTCCC...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGACCTGTCAAGTGTTaGACAAGACTTAAACCACTT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFRPVKC*TRLKPL
Trigger: AAGTGGTTTAAGTCTTGTCCAACACTTGACAGGTCT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACATCAATTTTGCAAAAATaGCACAACCACAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTSILQK*HNHNRV
Trigger: CACTCTGTTGTGGTTGTGCCATTTTTGCAAAATTGA...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp GTATTATCACAGTACATAAGGAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTATACTGTTCTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VLSQYIRNLSQG*SPLLHYTVLKG
Trigger: ACCTTTAAGAACAGTATAATGGAGAAGGGGAGACAAACCTTGTGACAGATTCCTTATGTACTGTGATAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTTTACTGATGCATTGCTaGGTAGTGGCTTATAACATG +
Preference number: 4 (lower is better)
Translates to: NFSFFFSQVLFSHYIHVSLLMHC*VVAYNM
Trigger: CATGTTATAAGCCACTACTCAGCAATGCATCAGTAA...ACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR TCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAATTCTCAGTCATTACTaGAGGTCATTTGACATCAAC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQILSHY*RSFDIN
Trigger: GTTGATGTCAAATGACCTTCAGTAATGACTGAGAAT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATATATCATTAAGCAATaGCACAGGGGCATGATATCC +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEYIIKQ*HRGMIS
Trigger: GGATATCATGCCCCTGTGGCATTGCTTAATGATATA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTTTTCTGCTAGCTGTTaGCTAATTTCTCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFFSASC*LISRSS
Trigger: AGAAGAACGAGAAATTAGGCAACAGCTAGCAGAAAA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAGTTCGATCTTCAGTTTaGATGTGGAAACCAGTCATA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEVRSSV*MWKPVI
Trigger: TATGACTGGTTTCCACATGCAAACTGAAGATCGAAC...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGTAGTTGGCATATTCTaGATCCATAAGAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQVVGIF*IHKRNK
Trigger: CTTATTCCTCTTATGGATGCAGAATATGCCAACTAC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGGTGGAGTCATCTTATaGATACCTATGACATTTACA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQGGVIL*IPMTFT
Trigger: TGTAAATGTCATAGGTATGCATAAGATGACTCCACC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAAGACATTTTAGCTGCTaGCACTGTGTATTATCACAG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVERHFSC*HCVLSQ
Trigger: CTGTGATAATACACAGTGGCAGCAGCTAAAATGTCT...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCCCTAGACATTTTAGCTaGTGCCACTGTGTATTATCA +
Preference number: 4 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIPRHFS*CHCVLS
Trigger: TGATAATACACAGTGGCAGCAGCTAAAATGTCTAGG...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTACTTCCTAGACAACTaGTGCCTAAAATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFYFLDN*CLKSNA
Trigger: AGCATTTGATTTTAGGCAGCAGTTGTCTAGGAAGTA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCAGATTTCCAGATGGCTaGTCATTAACACTTTTCATA +
Preference number: 4 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPRFPDG*SLTLFI
Trigger: TATGAAAAGTGTTAATGACCAGCCATCTGGAAATCT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTACAGATCTTTAATTGGTaGAGTCATCTTATGCATACC +
Preference number: 4 (lower is better)
Translates to: ISSSGDWNSRIRINITSLQIFNW*SHLMHT
Trigger: GGTATGCATAAGATGACTCCACCAATTAAAGATCTG...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCAGCAGATCTTTAATTaGTGGAGTCATCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFQQIFN*WSHLMH
Trigger: ATGCATAAGATGACTCCACCAATTAAAGATCTGCTG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGTTCTTGGTCACTACTaGCATTTACTGTTTAACATC +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQVLGHY*HLLFNI
Trigger: GATGTTAAACAGTAAATGCCAGTAGTGACCAAGAAC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGGTTCTTGGTCACTACTaGCATTTACTGTTTAACATC +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMVLGHY*HLLFNI
Trigger: GATGTTAAACAGTAAATGCCAGTAGTGACCAAGAAC...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGTCTTGTCCTTCTACCTaGAAAGAAAACTTGCATTAT +
Preference number: 4 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVSCPST*KENLHY
Trigger: ATAATGCAAGTTTTCTTTCCAGGTAGAAGGACAAGA...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CCA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTATGGGCCTGTGAATTCTaGCATACATGTTTAAATCAA +
Preference number: 4 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVWACEF*HTCLNQ
Trigger: TTGATTTAAACATGTATGCCAGAATTCACAGGCCCA...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR TCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATTCTGGACTAAGTGTTaGTTCATCAACATCAACCAA +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEFWTKC*FININQ
Trigger: TTGGTTGATGTTGATGAATCAACACTTAGTCCAGAA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATTTCTCGAATCTGTaGTTCAATATCTTCGTGAGT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQNFSNL*FNIFVS
Trigger: ACTCACGAAGATATTGAAGCACAGATTCGAGAAATT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAATTTCTCGAATCTGTaGTTCAATATCTTCGTGAGT +
Preference number: 4 (lower is better)
Translates to: KPKQYITRFTEAHYALEMNFSNL*FNIFVS
Trigger: ACTCACGAAGATATTGAAGCACAGATTCGAGAAATT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAGTAGTTGGCATATTCTaGATCCATAAGAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEVVGIF*IHKRNK
Trigger: CTTATTCCTCTTATGGATGCAGAATATGCCAACTAC...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR GCA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCTGTTTTAATGTAGTTTaGTTCTACACCATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ENLHYKDEEYGICDFNHICFNVV*FYTICP
Trigger: GGGACAGATGGTGTAGAAGCAAACTACATTAAAACA...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR GCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAATGATCAATATCTGCTaGTCCCAAATTACCCATAAT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQMINIC*SQITHN
Trigger: ATTATGGGTAATTTGGGAGCAGCAGATATTGATCAT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTAGCCTTTCTCATTGGTaGTGTTCCATTCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: ICYLNATKLYHRSEASMVSLSHW*CSILNF
Trigger: AAAATTAAGAATGGAACACCACCAATGAGAAAGGCT...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCATGTCTCAAATACATTaGGCCATACATAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFMSQIH*AIHSST
Trigger: TGTTGAACTATGTATGGCCCAATGTATTTGAGACAT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAATGTCTCAAATACATTaGGCCATACATAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQMSQIH*AIHSST
Trigger: TGTTGAACTATGTATGGCCCAATGTATTTGAGACAT...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGGGAACCAATGTAGATaGAGTTGTAAATTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQGNQCR*SCKFSN
Trigger: ATTGGAAAATTTACAACTCCATCTACATTGGTTCCC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CCA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCATCAATTTTGCAAAAATaGCACAACCACAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSSILQK*HNHNRV
Trigger: CACTCTGTTGTGGTTGTGCCATTTTTGCAAAATTGA...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp GTCATACAAGGAATGATGAGGAGTTACAAATCCAACTaGGAAACCCTTAATGCTCACTATCAATTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VIQGMMRSYKSN*ETLNAHYQFVE
Trigger: TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCTCATCATTCCTTGTATGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
3UTR CAA 72 bp AATCCCTCCAGTATAGTGTATATAATCACTGTGTTCTaGGTCACTACTGGCATTTACTGTTTAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: NPSSIVYIITVF*VTTGIYCLTSK
Trigger: TTTTGATGTTAAACAGTAAATGCCAGTAGTGACCAAGAACACAGTGATTATATACACTATACTGGAGGGATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS CCA 90 bp TTGGCGATCTTCGCCATTTTGTCCACTCGAACACACAGACGGAACTaGCGCTCCCAAGAACTTCCGCTCGTCGCCGCCGCCACGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LAIFAILSTRTHRRN*RSQELPLVAAATEK
Trigger: TTTCTCCGTGGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACAAAATGGCGAAGATCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAACGCCGTTTTCGTTTaGATGGAGGCTGGGACGCTG +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHNAVFV*MEAGTL
Trigger: CAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGTT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCGATACCATAAGGAGTaGCTGCTTCAGCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHRYHKE*LLQPRQ
Trigger: CTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS GCA 90 bp GCCAAGGCAGCAATGGCCAAAGCACTGATGGTCCGAACTTTCTGCTaGTCATCCACAAGACCTCTAGTCCCAACTACTAAGGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AKAAMAKALMVRTFC*SSTRPLVPTTKEAE
Trigger: CTCAGCCTCCTTAGTAGTTGGGACTAGAGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462613.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATACCAGTGTGTCTCGCTaGCCAGGACTTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHTSVSR*PGLLAF
Trigger: AAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAATGGTTGTGCTAGTTaGAGGGGAACATCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHNGCAS*RGTSPE
Trigger: CTCAGGGGATGTTCCCCTCAAACTAGCACAACCATT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS GCA 90 bp TCAGCCAAGGCAGCAATGGCCAAAGCACTGATGGTCCGAACTTTCTaGTGCTCATCCACAAGACCTCTAGTCCCAACTACTAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SAKAAMAKALMVRTF*CSSTRPLVPTTKEA
Trigger: AGCCTCCTTAGTAGTTGGGACTAGAGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGCCTTGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462613.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAAAACGCCGTTTTCGTTTaGATGGAGGCTGGGACGCTG +
Preference number: 5 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQNAVFV*MEAGTL
Trigger: CAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGTT...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATCAACTTGATAGTTTTTaGGGAGTGGCACCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHQLDSF*GVAPGV
Trigger: GACTCCTGGTGCCACTCCCAAAAAACTATCAAGTTG...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGTATCTCTCTCTGTTTaGGGGGTTTCATCCCATCTG +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHVSLSV*GVSSHL
Trigger: CAGATGGGATGAAACCCCCAAAACAGAGAGAGATAC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATGCTTGCCAGGACTTCTaGCTTTTGCACACAGCTTTT +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHACQDF*LLHTAF
Trigger: AAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGC...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGTCCGCCTATGCTTTTTGTATTCATCTTCCCGGTCTGCAATCTTTGGAGGTCTCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: GPPMLFVFIFPVCNLWRSPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...AGACCTCCAAAGATTGCAGACCGGGAAGATGAATACAAAAAGCATAGGCGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CAA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAACCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: QHSLESSEVMGSWVANPEPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGGAGTCTCGCTTCCCTTaGCACGACCTGGTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQESRFP*HDLVSH
Trigger: ATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACTC...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACCTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDLTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: HSLESSEVMGSWVANPEYPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp GGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GSGVFPHFRAFVSISSSDVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTGACGCTGCTGCTCCATaGACGACTTTTAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGDAAAP*TTFSSP
Trigger: TGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTC...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGCCTTCAGTGCTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAACAACTTGATAGTTTTTaGGGAGTGGCACCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: GLQCSKNAAQYFRVLFTQQLDSF*GVAPGV
Trigger: GACTCCTGGTGCCACTCCCAAAAAACTATCAAGTTG...TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCGCCTCCATGGCCTGGTGGTATCTCTCTCTGTTTaGGGGGTTTCATCCCATCTG +
Preference number: 5 (lower is better)
Translates to: FHPICFYEHWKLRLHGLVVSLSV*GVSSHL
Trigger: CAGATGGGATGAAACCCCCAAAACAGAGAGAGATAC...CACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TCTCACCCTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCTCTGCTGCACCTACTTaGTTTGCCAACTCCACAGTA +
Preference number: 5 (lower is better)
Translates to: SHPREILLSKGHETMSGGSAAPT*FANSTV
Trigger: TACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA...GCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAGGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGGCAGGTCTCATGCACCTTTGCATCCCCTGCATATAAGCACAGTGGCTGGCATAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTAT +
Preference number: 5 (lower is better)
Translates to: GQVSCTFASPAYKHSGWHNLSQG*SPLLHY
Trigger: ATAATGGAGAAGGGGAGACAAACCTTGTGACAGATT...ATGCCAGCCACTGTGCTTATATGCAGGGGATGCAAAGGTGCATGAGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTCTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGLTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ACTTCAGGGTACTCTTCACCCAAATACTCATACAATACAACACCCAAGTGTCCCCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: TSGYSSPKYSYNTTPKCPPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...GGGACACTTGGGTGTTGTATTGTATGAGTATTTGGGTGAAGAGTACCCTGAAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGTTCCTGGGTTGCTAATCCGGAATACGTACACTTTCGTGCCTTTGTCTCCATCGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GSWVANPEYVHFRAFVSIVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...GATGGAGACAAAGGCACGAAAGTGTACGTATTCCGGATTAGCAACCCAGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAACAACTTGATAGTTTTTaGGGAGTGGCACCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQQLDSF*GVAPGV
Trigger: GACTCCTGGTGCCACTCCCAAAAAACTATCAAGTTG...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTCGATACCATAAGGAGTaGCTGCTTCAGCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: REILLSKGHETMSGGIFGRYHKE*LLQPRQ
Trigger: CTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCG...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGCTCCCAACTGTCACAAGATGCTCTGAGGATCAGTGCGGGGTCATCTTACACAGAAGATCATGCCCAATaGGTAGTGTCATTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GSQLSQDALRISAGSSYTEDHAQ*VVSFFL
Trigger: CAGAAAGAATGACACTACCAATTGGGCATGATCTTC...TGTGTAAGATGACCCCGCACTGATCCTCAGAGCATCTTGTGACAGTTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGGAGGCATTTTTGGTTATTACACTGGGATGGGGGTGTGCTGCTGGCATCTCAAGTGAGAACACAATGCTaGAAGACCAGCATCCCAAGT +
Preference number: 5 (lower is better)
Translates to: WRHFWLLHWDGGVLLASQVRTQC*KTSIPS
Trigger: ACTTGGGATGCTGGTCTTCAAGCATTGTGTTCTCAC...TTGAGATGCCAGCAGCACACCCCCATCCCAGTGTAATAACCAAAAATGCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACGCGATCTTCGCCATTTaGTCCACTCGAACACACAGA +
Preference number: 5 (lower is better)
Translates to: LESSEVMGSWVANPEYVHAIFAI*STRTHR
Trigger: TCTGTGTGTTCGAGTGGACAAAATGGCGAAGATCGC...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTGCGATCTTCGCCATTTaGTCCACTCGAACACACAGA +
Preference number: 5 (lower is better)
Translates to: REILLSKGHETMSGGIFGAIFAI*STRTHR
Trigger: TCTGTGTGTTCGAGTGGACAAAATGGCGAAGATCGC...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSSCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CATCTGCAAAAGGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: HLQKDQDALGKLSWSAYAVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...AGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CAA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAAGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: QHSLESSEVMGSWVANPEVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCATGGCTGGTGTGCCAATaGGTGTCTTTCCAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPWLVCQ*VSFQGS
Trigger: TGACCCCTGGAAAGACACCAATTGGCACACCAGCCA...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GTAGGATCCCATATTTTTGAGCCTGGGGTTGCTCCAGGAGTCTCGCTTCCCTTTCAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: VGSHIFEPGVAPGVSLPFQDFLL*HTAFKK
Trigger: CTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTG...AAAGGGAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: QHSLESSEVMGSWVANPEYTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGTA...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp CCAAACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAAAGGCTTTAACACAGGTGAGAACACAATGCTaGAAGACCAGCATCCCAAGT +
Preference number: 5 (lower is better)
Translates to: PNPFLCVGGYPSIKALTQVRTQC*KTSIPS
Trigger: ACTTGGGATGCTGGTCTTCAAGCATTGTGTTCTCAC...CTGTGTTAAAGCCTTTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFSCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACGTACACAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: LESSEVMGSWVANPEYVHSCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...GTGTACGTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp CAGCACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAAGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: QHSLESSEVMGSWVANPEVQLQQ*MSRIQQ
Trigger: TTGCTGGATACGTGACATCAATTGCTGCAACTGAAC...TTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp CTCAATTGTCTCCATCACCATTTTTCTGTACTGTTCGGCTTCATCTTTCAGATCAACGCCGTTTTCGTTTaGATGGAGGCTGGGACGCTG +
Preference number: 5 (lower is better)
Translates to: LNCLHHHFSVLFGFIFQINAVFV*MEAGTL
Trigger: CAGCGTCCCAGCCTCCATCAAAACGAAAACGGCGTT...GATCTGAAAGATGAAGCCGAACAGTACAGAAAAATGGTGATGGAGACAATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTGCTTGCCAGGACTTCTaGCTTTTGCACACAGCTTTT +
Preference number: 5 (lower is better)
Translates to: REILLSKGHETMSGGIFGACQDF*LLHTAF
Trigger: AAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGC...ACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCAAGCCTGAAGCTGTTCAGGAGTCATACTCATTATGTGACCTGGAGTAGGGGTTATGGTTTGACTCGTTaGCCAAGAGCATTAACCACT +
Preference number: 5 (lower is better)
Translates to: PSLKLFRSHTHYVTWSRGYGLTR*PRALTT
Trigger: AGTGGTTAATGCTCTTGGCAAACGAGTCAAACCATA...ACCCCTACTCCAGGTCACATAATGAGTATGACTCCTGAACAGCTTCAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS GCA 90 bp TCATCCTGTAGAATCGAGGCCCACTCCTTGAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTCTCGAATCTGTGCTTCAATATCTTC +
Preference number: 5 (lower is better)
Translates to: SSCRIEAHSLSFIKS*LLALNFSNLCFNIF
Trigger: GAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTCGATTCTACAGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGCGATCTTCGCCATTTaGTCCACTCGAACACACAGA +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPAIFAI*STRTHR
Trigger: TCTGTGTGTTCGAGTGGACAAAATGGCGAAGATCGC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CTAGGGAGATTTTGCTCTCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: LGRFCSPRDMRQCLEAFLVQLQQ*MSRIQQ
Trigger: TTGCTGGATACGTGACATCAATTGCTGCAACTGAAC...CAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGAGAGCAAAATCTCCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACACCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAAGACGCTGCTGCTCCATaGACGACTTTTAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKDAAAP*TTFSSP
Trigger: TGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTC...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACATTTTTGAGCCTGGGGTaGCTCCAGGAGTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTFLSLG*LQESRF
Trigger: GAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAA...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTACCAGTGTGTCTCGCTaGCCAGGACTTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSISGLMVEIIVARPAAFTSVSR*PGLLAF
Trigger: AAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGT...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTAATGGTTGTGCTAGTTaGAGGGGAACATCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVNGCAS*RGTSPE
Trigger: CTCAGGGGATGTTCCCCTCAAACTAGCACAACCATT...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPLTFVP*SPSAVL
Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGGGACGCTGCTGCTCCATTGACGACTTTTAGTTCTCCAGCTTTAGCTTTTTCTTCAATAATGCCAAGGTaGAGAAACCCTAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: WDAAAPLTTFSSPALAFSSIMPR*RNPRVA
Trigger: AGCTACCCTAGGGTTTCTCAACCTTGGCATTATTGA...AGAAAAAGCTAAAGCTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS GCA 90 bp ATAACCTGTAGAATCGAGGCCCACTCCTTGAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTCTCGAATCTGTGCTTCAATATCTTC +
Preference number: 5 (lower is better)
Translates to: ITCRIEAHSLSFIKS*LLALNFSNLCFNIF
Trigger: GAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTCGATTCTACAGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: DQDALGKLSWSAYAFCIHSCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...ATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414174.1
CDS-3UTR CAA 90 bp CACAGTTTAGAGTCTTCAGAAGTGATGGGTTCCTGGGTTGCTAATCCGGAATACCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGT +
Preference number: 5 (lower is better)
Translates to: HSLESSEVMGSWVANPEYHLQVQ*QQLMSR
Trigger: ACGTGACATCAATTGCTGCAACTGAACTTGAAGATG...GTATTCCGGATTAGCAACCCAGGAACCCATCACTTCTGAAGACTCTAAACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS-3UTR CAA 90 bp TCTGCTGCACCTACTTTGTTTGCCAACTCCACAGTAGTATCAACTAACTGTCGGCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGT +
Preference number: 5 (lower is better)
Translates to: SAAPTLFANSTVVSTNCRHLQVQ*QQLMSR
Trigger: ACGTGACATCAATTGCTGCAACTGAACTTGAAGATG...CCGACAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCCCGGTCTGCAATCTTaGGAGGTCTGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSIPGLQS*EVCAQQ
Trigger: TTGCTGAGCACAGACCTCCAAAGATTGCAGACCGGG...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGCAGTTCGAGAAATCAAGTCAGCTGCCTGTTGCCTAACTTTAGCAGATTTGTTGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: SSSRNQVSCLLPNFSRFVVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...AACAAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTGATTTCTCGAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGAGTCTGATCAGCTGTTaGATCCCAACGCCGTTTTCG +
Preference number: 5 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMSLISC*IPTPFS
Trigger: CGAAAACGGCGTTGGGATCAAACAGCTGATCAGACT...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAGTATCTCTCTCTGTTTaGGGGGTTTCATCCCATCTG +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPVSLSV*GVSSHL
Trigger: CAGATGGGATGAAACCCCCAAAACAGAGAGAGATAC...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATGGCTGGTGTGCCAATaGGTGTCTTTCCAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQWLVCQ*VSFQGS
Trigger: TGACCCCTGGAAAGACACCAATTGGCACACCAGCCA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGCGATACCATAAGGAGTaGCTGCTTCAGCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVRYHKE*LLQPRQ
Trigger: CTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCG...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACAAATGGTTGTGCTAGTTaGAGGGGAACATCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTNGCAS*RGTSPE
Trigger: CTCAGGGGATGTTCCCCTCAAACTAGCACAACCATT...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTATTACTGAAGGTCATTaGACATCAACCATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSITEGH*TSTIES
Trigger: GCTCTCTATGGTTGATGTCAAATGACCTTCAGTAAT...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS CCA 90 bp TCAAGCAGCAGAATAGAAGCCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSSRIEAICKRIKTL*GNYHGPPMLFVFIF
Trigger: GAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCTGCTGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409915.8
ENST00000414963.2
CDS-3UTR CAA 90 bp TTAGGATCAGGGGTTTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTTTCTTTAGTCAAGTGTaGTTCTCGCATTACATCCAT +
Preference number: 5 (lower is better)
Translates to: LGSGVFPHFRAFVSISSSFFSQV*FSHYIH
Trigger: ATGGATGTAATGCGAGAACAACACTTGACTAAAGAA...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAAACCCCTGATCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAAGAGTCTCGCTTCCCTTaGCACGACCTGGTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEESRFP*HDLVSH
Trigger: ATGAGACACCAGGTCGTGCAAAGGGAAGCGAGACTC...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATTTTTGAGCCTGGGGTaGCTCCAGGAGTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEFLSLG*LQESRF
Trigger: GAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCATTTTTGAGCCTGGGGTaGCTCCAGGAGTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSFLSLG*LQESRF
Trigger: GAAGCGAGACTCCTGGAGCAACCCCAGGCTCAAAAA...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCATGGCTGGTGTGCCAATaGGTGTCTTTCCAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSWLVCQ*VSFQGS
Trigger: TGACCCCTGGAAAGACACCAATTGGCACACCAGCCA...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACACCAGTGTGTCTCGCTaGCCAGGACTTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDTSVSR*PGLLAF
Trigger: AAAAGCAAGAAGTCCTGGCAAGCGAGACACACTGGT...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGATCAGGTCTGCTGCACCTACTTaGTTTGCCAACTCCACAGTA +
Preference number: 5 (lower is better)
Translates to: VLFSHYIHVSPSIHFRIRSAAPT*FANSTV
Trigger: TACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA...CCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCACAAGTCAGCTGCCTGTaGCCTAACTTTAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPQVSCL*PNFSRF
Trigger: AAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTG...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GCTTCTACACCATCTGTCCCACAACACTGTTTTACCACCTTCAGCACAATTTTTTCCTCATCCACTCTCTaGCAGATACATATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ASTPSVPQHCFTTFSTIFSSSTL*QIHIQL
Trigger: GAGCTGAATATGTATCTGCAAGAGAGTGGATGAGGA...AAAAATTGTGCTGAAGGTGGTAAAACAGTGTTGTGGGACAGATGGTGTAGAAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGCTACGAATAGCCTTTTaGTGGGCTTTTAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMLRIAF*WAFKSS
Trigger: AGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAG...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGGCCCCTTGTGCTGACTaGCACACTAAAATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMAPCAD*HTKISK
Trigger: TTTGCTAATTTTAGTGTGCAAGTCAGCACAAGGGGC...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp GTGTTGACTGTGGCTCTACGAATAGCCTTTTTGTGGGCTTTTAAGAGCTCTAAATCAATAATGCCAAGGTaGAGAAACCCTAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: VLTVALRIAFLWAFKSSKSIMPR*RNPRVA
Trigger: AGCTACCCTAGGGTTTCTCAACCTTGGCATTATTGA...TTTAGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAGAGCCACAGTCAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTGCGATCTTCGCCATTTaGTCCACTCGAACACACAGA +
Preference number: 5 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSIAIFAI*STRTHR
Trigger: TCTGTGTGTTCGAGTGGACAAAATGGCGAAGATCGC...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACAAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTSCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCCCTTCTCCATTATACTGTTCTTAAAGGTAGAGGGCAGGTCTCATGCACCTTTTTCTTTAGTCAAGTGTaGTTCTCGCATTACATCCAT +
Preference number: 5 (lower is better)
Translates to: PLLHYTVLKGRGQVSCTFFFSQV*FSHYIH
Trigger: ATGGATGTAATGCGAGAACAACACTTGACTAAAGAA...AAAGGTGCATGAGACCTGCCCTCTACCTTTAAGAACAGTATAATGGAGAAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCGACGCTGCTGCTCCATaGACGACTTTTAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFDAAAP*TTFSSP
Trigger: TGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCGTC...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGTCTGATCAGCTGTTaGATCCCAACGCCGTTTTCG +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSLISC*IPTPFS
Trigger: CGAAAACGGCGTTGGGATCAAACAGCTGATCAGACT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAGTCTGATCAGCTGTTaGATCCCAACGCCGTTTTCG +
Preference number: 5 (lower is better)
Translates to: KPKQYITRFTEAHYALEMSLISC*IPTPFS
Trigger: CGAAAACGGCGTTGGGATCAAACAGCTGATCAGACT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAAGTTCGATCTTCAGTTaGCATGTGGAAACCAGTCAT +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPSSIFS*HVETSH
Trigger: ATGACTGGTTTCCACATGCAAACTGAAGATCGAACT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATACAAGTCAGCTGCCTGTaGCCTAACTTTAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIQVSCL*PNFSRF
Trigger: AAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTG...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CACTCTGGTTTACTTACTTATTCCCTCCTGCCTACAAATCTTGACTGCCTTGCAATTACTGAAGGTCATTaGACATCAACCATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: HSGLLTYSLLPTNLDCLAITEGH*TSTIES
Trigger: GCTCTCTATGGTTGATGTCAAATGACCTTCAGTAAT...TGCAAGGCAGTCAAGATTTGTAGGCAGGAGGGAATAAGTAAGTAAACCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTATCTATATCAGGTCTCATGGTAGAGATCATAGTAGCCAGACCAGCAGCCTTTAAAACCTTTAACCCTTaGCGTTTCTATGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LSISGLMVEIIVARPAAFKTFNP*RFYGIG
Trigger: GCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTTT...AAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CAA 90 bp TCCAAGGGACATGAGACAATGTCTGGAGGCATTTTTGGTTATTACACTGGGATGAACAGGCACCTAATTTaGATTGTGAAACTCACTCAC +
Preference number: 5 (lower is better)
Translates to: SKGHETMSGGIFGYYTGMNRHLI*IVKLTH
Trigger: GTGAGTGAGTTTCACAATCAAAATTAGGTGCCTGTT...CATCCCAGTGTAATAACCAAAAATGCCTCCAGACATTGTCTCATGTCCCTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CAA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCGCGATCTTCGCCATTTaGTCCACTCGAACACACAGA +
Preference number: 5 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIAIFAI*STRTHR
Trigger: TCTGTGTGTTCGAGTGGACAAAATGGCGAAGATCGC...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: KPKQYITRFTEAHYALEMSCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SQVLFSHYIHVSPSIHFRVQLQQ*MSRIQQ
Trigger: TTGCTGGATACGTGACATCAATTGCTGCAACTGAAC...CCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGT +
Preference number: 5 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMHLQVQ*QQLMSR
Trigger: ACGTGACATCAATTGCTGCAACTGAACTTGAAGATG...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCGTCCGCCTATGCTTTTaGTATTCATCTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFVRLCF*YSSSRS
Trigger: AGACCGGGAAGATGAATACAAAAAGCATAGGCGGAC...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGCTTGCCAGGACTTCTaGCTTTTGCACACAGCTTTT +
Preference number: 5 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQACQDF*LLHTAF
Trigger: AAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCTCTGCTGCACCTACTTaGTTTGCCAACTCCACAGTA +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSAAPT*FANSTV
Trigger: TACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACATATGGTTTGACTCGTTaGCCAAGAGCATTAACCACT +
Preference number: 5 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTYGLTR*PRALTT
Trigger: AGTGGTTAATGCTCTTGGCAAACGAGTCAAACCATA...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGGCTGGTCATTAACACTTTTCATAGTTCGATCTTCAGTTTGCATGTGGAAACCGAGAAAAGCCCAACATaGTCCTGTTCTATCAGCATT +
Preference number: 5 (lower is better)
Translates to: WLVINTFHSSIFSLHVETEKSPT*SCSISI
Trigger: AATGCTGATAGAACAGGACAATGTTGGGCTTTTCTC...GGTTTCCACATGCAAACTGAAGATCGAACTATGAAAAGTGTTAATGACCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATAGAGAAAAGCCCAACATaGTCCTGTTCTATCAGCATT +
Preference number: 5 (lower is better)
Translates to: CYESVLGTNVDGVVNFPIEKSPT*SCSISI
Trigger: AATGCTGATAGAACAGGACAATGTTGGGCTTTTCTC...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTTTGATTGTGAAACTCACTCACCTGAGGAAAGCTTCCATCAGGCTCACTATGAGTTACAAATCCAACTaGGAAACCCTTAATGCTCAC +
Preference number: 5 (lower is better)
Translates to: ILIVKLTHLRKASIRLTMSYKSN*ETLNAH
Trigger: GTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACT...CATAGTGAGCCTGATGGAAGCTTTCCTCAGGTGAGTGAGTTTCACAATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CAA 90 bp CAGTCTCCTTTGCTCCACAATGCCACTACAAAGCCTATTTTCCATAAAGAACCAATTACTGAAGGTCATTaGACATCAACCATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QSPLLHNATTKPIFHKEPITEGH*TSTIES
Trigger: GCTCTCTATGGTTGATGTCAAATGACCTTCAGTAAT...TGGTTCTTTATGGAAAATAGGCTTTGTAGTGGCATTGTGGAGCAAAGGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GGACTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGAAAACCTTTAACCCTTaGCGTTTCTATGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: GLAYSSTAVGKKLRTVSMKTFNP*RFYGIG
Trigger: GCCAATGCCATAGAAACGCAAAGGGTTAAAGGTTTT...CATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp CTGGCATATAGCAGTACTGCTGTAGGAAAGAAATTAAGGACAGTTAGTATGGGCAACAGGCACCTAATTTaGATTGTGAAACTCACTCAC +
Preference number: 5 (lower is better)
Translates to: LAYSSTAVGKKLRTVSMGNRHLI*IVKLTH
Trigger: GTGAGTGAGTTTCACAATCAAAATTAGGTGCCTGTT...GCCCATACTAACTGTCCTTAATTTCTTTCCTACAGCAGTACTGCTATATGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp GACATTTCCTATGCTGAAGATCATGCCCAATTGGTAGTGTCATTCTTTCTGACATCTAGAGAGGATGTGTaGAACTGCACCCTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: DISYAEDHAQLVVSFFLTSREDV*NCTLKN
Trigger: ATTCTTAAGGGTGCAGTTCAACACATCCTCTCTAGA...TGTCAGAAAGAATGACACTACCAATTGGGCATGATCTTCAGCATAGGAAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTGTTAACCTTAGGGGATTaGAGAGCCACTGGAAACCAA +
Preference number: 5 (lower is better)
Translates to: AQTVYNKIHRGTLCFRNVLTLGD*RATGNQ
Trigger: TTGGTTTCCAGTGGCTCTCAAATCCCCTAAGGTTAA...CACATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAATTAACCTTAGGGGATTaGAGAGCCACTGGAAACCAA +
Preference number: 5 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQLTLGD*RATGNQ
Trigger: TTGGTTTCCAGTGGCTCTCAAATCCCCTAAGGTTAA...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: ENLHYKDEEYGICDFNHISCLLA*NFSNLC
Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414174.1
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQVQLQQ*MSRIQQ
Trigger: TTGCTGGATACGTGACATCAATTGCTGCAACTGAAC...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFVQLQQ*MSRIQQ
Trigger: TTGCTGGATACGTGACATCAATTGCTGCAACTGAAC...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTAAACAAAGGACCAGCTCCAAATTCACGAGCTTTATCAGTAATCTGACGCAACATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGT +
Preference number: 5 (lower is better)
Translates to: IKQRTSSKFTSFISNLTQHLQVQ*QQLMSR
Trigger: ACGTGACATCAATTGCTGCAACTGAACTTGAAGATG...TTGCGTCAGATTACTGATAAAGCTCGTGAATTTGGAGCTGGTCCTTTGTTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCAGTTCGATCTTCAGTTaGCATGTGGAAACCAGTCAT +
Preference number: 5 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPSSIFS*HVETSH
Trigger: ATGACTGGTTTCCACATGCAAACTGAAGATCGAACT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACACAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTQDFLL*HTAFKK
Trigger: CTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTG...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGCAAGTCAGCTGCCTGTaGCCTAACTTTAGCAGATTT +
Preference number: 5 (lower is better)
Translates to: KPKQYITRFTEAHYALEMQVSCL*PNFSRF
Trigger: AAATCTGCTAAAGTTAGGCAACAGGCAGCTGACTTG...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATCCTCATCCACTCTCTaGCAGATACATATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQSSSTL*QIHIQL
Trigger: GAGCTGAATATGTATCTGCAAGAGAGTGGATGAGGA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTTCCTCATCCACTCTCTaGCAGATACATATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSISSSTL*QIHIQL
Trigger: GAGCTGAATATGTATCTGCAAGAGAGTGGATGAGGA...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCAAATACTCATACAATACAACACCCAAGTGTCCCATCAATTTTTCCTCTTGACCTACGAATAGCCTTTTaGTGGGCTTTTAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PNTHTIQHPSVPSIFPLDLRIAF*WAFKSS
Trigger: AGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAG...GTCAAGAGGAAAAATTGATGGGACACTTGGGTGTTGTATTGTATGAGTATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TGCTATGAGAGCGTCCTGGGAACCAATGTAGATGGAGTTGTAAATTTTCCAATACTGAGGCTACTCTTCTaGCTGTCATTATTAACACAA +
Preference number: 5 (lower is better)
Translates to: CYESVLGTNVDGVVNFPILRLLF*LSLLTQ
Trigger: TTGTGTTAATAATGACAGCAAGAAGAGTAGCCTCAG...TATTGGAAAATTTACAACTCCATCTACATTGGTTCCCAGGACGCTCTCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TACATAGTTCAACAAGTGATTCAGCGAATCTTCACAACCAAATCCATAAACCCCAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTAT +
Preference number: 5 (lower is better)
Translates to: YIVQQVIQRIFTTKSINPNLSQG*SPLLHY
Trigger: ATAATGGAGAAGGGGAGACAAACCTTGTGACAGATT...GGGGTTTATGGATTTGGTTGTGAAGATTCGCTGAATCACTTGTTGAACTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTAGCCCCTTGTGCTGACTaGCACACTAAAATTAGCAAA +
Preference number: 5 (lower is better)
Translates to: ISSSGDWNSRIRINITSLAPCAD*HTKISK
Trigger: TTTGCTAATTTTAGTGTGCAAGTCAGCACAAGGGGC...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652026.1
CDS-3UTR CAA 90 bp CCTGAATTACATGAGGAGATGTCTCAAATACATTGGGCCATACATAGTTCAACACGAAAGAGCTCAATTTaGCAAAAATGGCACAACCAC +
Preference number: 5 (lower is better)
Translates to: PELHEEMSQIHWAIHSSTRKSSI*QKWHNH
Trigger: GTGGTTGTGCCATTTTTGCAAAATTGAGCTCTTTCG...TGTTGAACTATGTATGGCCCAATGTATTTGAGACATCTCCTCATGTAATTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTATGTCTGGAGGCATTTTaGGTTATTACACTGGGATGG +
Preference number: 5 (lower is better)
Translates to: ISSSGDWNSRIRINITSLCLEAF*VITLGW
Trigger: CCATCCCAGTGTAATAACCAAAAATGCCTCCAGACA...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAATGTCTGGAGGCATTTTaGGTTATTACACTGGGATGG +
Preference number: 5 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQCLEAF*VITLGW
Trigger: CCATCCCAGTGTAATAACCAAAAATGCCTCCAGACA...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIVQLQQ*MSRIQQ
Trigger: TTGCTGGATACGTGACATCAATTGCTGCAACTGAAC...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGT +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFHLQVQ*QQLMSR
Trigger: ACGTGACATCAATTGCTGCAACTGAACTTGAAGATG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp CCTAATTTCTCGTTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTACATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGT +
Preference number: 5 (lower is better)
Translates to: PNFSFFFSQVLFSHYIHVHLQVQ*QQLMSR
Trigger: ACGTGACATCAATTGCTGCAACTGAACTTGAAGATG...TACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAACGAGAAATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409915.8
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCCAGGACTTCTTGCTTTaGCACACAGCTTTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFQDFLL*HTAFKK
Trigger: CTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTG...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp TTCTTCTTTAGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTAATCTGTCACAAGGTTaGTCTCCCCTTCTCCATTAT +
Preference number: 5 (lower is better)
Translates to: FFFSQVLFSHYIHVSPSINLSQG*SPLLHY
Trigger: ATAATGGAGAAGGGGAGACAAACCTTGTGACAGATT...AATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACTAAAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGTCAAGTGTTGTTCTCGCATTACATCCATGTAAGTCCTAGCATTCATTTTAGGAGTTACAAATCCAACTaGGAAACCCTTAATGCTCAC +
Preference number: 5 (lower is better)
Translates to: SQVLFSHYIHVSPSIHFRSYKSN*ETLNAH
Trigger: GTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACT...CCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACACTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATTTGTTATTTAAACGCCACAAAACTGTACCACAGATCTGAGGCAAGTATGGTTTCTAGAGAGGATGTGTaGAACTGCACCCTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: ICYLNATKLYHRSEASMVSREDV*NCTLKN
Trigger: ATTCTTAAGGGTGCAGTTCAACACATCCTCTCTAGA...AACCATACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGTCTAGAGAGGATGTGTaGAACTGCACCCTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: KPKQYITRFTEAHYALEMSREDV*NCTLKN
Trigger: ATTCTTAAGGGTGCAGTTCAACACATCCTCTCTAGA...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGCCCAAACAGTATATAACAAGATTCACAGAGGCACACTATGCTTTAGAAATGCGAAAGAGCTCAATTTaGCAAAAATGGCACAACCAC +
Preference number: 5 (lower is better)
Translates to: KPKQYITRFTEAHYALEMRKSSI*QKWHNH
Trigger: GTGGTTGTGCCATTTTTGCAAAATTGAGCTCTTTCG...CATTTCTAAAGCATAGTGTGCCTCTGTGAATCTTGTTATATACTGTTTGGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp ATCTTATGCACATATGGACGAACTAAGTCATCAAGTTTGTACAGTATCCTATCAAGTTCGATCTTCAGTTaGCATGTGGAAACCAGTCAT +
Preference number: 5 (lower is better)
Translates to: ILCTYGRTKSSSLYSILSSSIFS*HVETSH
Trigger: ATGACTGGTTTCCACATGCAAACTGAAGATCGAACT...TGATAGGATACTGTACAAACTTGATGACTTAGTTCGTCCATATGTGCATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAATATGGTTTGACTCGTTaGCCAAGAGCATTAACCACT +
Preference number: 5 (lower is better)
Translates to: RSYKSNLETLNAHYQFVEYGLTR*PRALTT
Trigger: AGTGGTTAATGCTCTTGGCAAACGAGTCAAACCATA...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACTACGAATAGCCTTTTaGTGGGCTTTTAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: RSYKSNLETLNAHYQFVELRIAF*WAFKSS
Trigger: AGAGCTCTTAAAAGCCCACAAAAAGGCTATTCGTAG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AAGGTCTTTGAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAACTGAGGCTACTCTTCTaGCTGTCATTATTAACACAA +
Preference number: 5 (lower is better)
Translates to: KVFEKIGKTSHSVFHISQLRLLF*LSLLTQ
Trigger: TTGTGTTAATAATGACAGCAAGAAGAGTAGCCTCAG...TTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTCAAAGACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAGAAGATAGGTAAAACTTCACATAGCGTCTTCCACATATCACAAAATGCTTTCAGTTACAAATCCAACTaGGAAACCCTTAATGCTCAC +
Preference number: 5 (lower is better)
Translates to: EKIGKTSHSVFHISQNAFSYKSN*ETLNAH
Trigger: GTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACT...GAAAGCATTTTGTGATATGTGGAAGACGCTATGTGAAGTTTTACCTATCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp GAAAACTTGCATTATAAAGATGAAGAATATGGCATCTGTGACTTCAACCACATCGAAGATCATGCCCAATaGGTAGTGTCATTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ENLHYKDEEYGICDFNHIEDHAQ*VVSFFL
Trigger: CAGAAAGAATGACACTACCAATTGGGCATGATCTTC...GATGTGGTTGAAGTCACAGATGCCATATTCTTCATCTTTATAATGCAAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487698.5
ENST00000652026.1
CDS-3UTR CAA 90 bp ATTTCCTCATCAGGAGACTGGAATTCTCGAATAAGGATTAACATCACTTCTCTATTCTTTAGTCAAGTGTaGTTCTCGCATTACATCCAT +
Preference number: 5 (lower is better)
Translates to: ISSSGDWNSRIRINITSLFFSQV*FSHYIH
Trigger: ATGGATGTAATGCGAGAACAACACTTGACTAAAGAA...TAGAGAAGTGATGTTAATCCTTATTCGAGAATTCCAGTCTCCTGATGAGGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652026.1
ENST00000652738.1
CDS-3UTR CAA 90 bp AGGAGTTACAAATCCAACTTGGAAACCCTTAATGCTCACTATCAATTTGTTGAACTGAGGCTACTCTTCTaGCTGTCATTATTAACACAA +
Preference number: 5 (lower is better)
Translates to: RSYKSNLETLNAHYQFVELRLLF*LSLLTQ
Trigger: TTGTGTTAATAATGACAGCAAGAAGAGTAGCCTCAG...TTCAACAAATTGATAGTGAGCATTAAGGGTTTCCAAGTTGGATTTGTAACTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335508.11
ENST00000652026.1
ENST00000652738.1
CDS CCA 72 bp TTCGCCATTTTGTCCACTCGAACACACAGACGGAACTaGCGCTCCCAAGAACTTCCGCTCGTCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: FAILSTRTHRRN*RSQELPLVAAA
Trigger: GGCGGCGGCGACGAGCGGAAGTTCTTGGGAGCGCCAGTTCCGTCTGTGTGTTCGAGTGGACAAAATGGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414963.2
ENST00000487698.5
CDS GCA 72 bp GCAGCAATGGCCAAAGCACTGATGGTCCGAACTTTCTaGTGCTCATCCACAAGACCTCTAGTCCCAACTACT +
Preference number: 6 (lower is better)
Translates to: AAMAKALMVRTF*CSSTRPLVPTT
Trigger: AGTAGTTGGGACTAGAGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462613.1
CDS GCA 72 bp GCAATGGCCAAAGCACTGATGGTCCGAACTTTCTGCTaGTCATCCACAAGACCTCTAGTCCCAACTACTAAG +
Preference number: 6 (lower is better)
Translates to: AMAKALMVRTFC*SSTRPLVPTTK
Trigger: CTTAGTAGTTGGGACTAGAGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTTTGGCCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462613.1
CDS GCA 72 bp AGAATCGAGGCCCACTCCTTGAGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTCTCGAATCTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: RIEAHSLSFIKS*LLALNFSNLCF
Trigger: GAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTCGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414174.1
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CAA 90 bp ATCGAGGCCCACTCCTTGAGCTTCATCAAGAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGCTTCAATATCTTCGTGAGTCTTGGC +
Preference number: 6 (lower is better)
Translates to: IEAHSLSFIKSCLLA*NFSNLCFNIFVSLG
Trigger: GCCAAGACTCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414174.1
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CAA 72 bp CTGGTCATAATAACCTGTAGAATCGAGGCCCACTCCTaGAGCTTCATCAAGAGCTGCCTTCTTGCCTTGAAT +
Preference number: 6 (lower is better)
Translates to: LVIITCRIEAHS*SFIKSCLLALN
Trigger: ATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTCGATTCTACAGGTTATTATGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS TCA 72 bp GTCATCGTCATCATCTTCAAGTTCAGTTGCAGCAATTaGTGTCACGTATCCAGCAAATCTGCTGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: VIVIIFKFSCSN*CHVSSKSAVTS
Trigger: GGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CAA 72 bp CACTCCTTGAGCTTCATCAAGAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGCTTCAATATCTTCGTG +
Preference number: 6 (lower is better)
Translates to: HSLSFIKSCLLA*NFSNLCFNIFV
Trigger: CACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414174.1
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CCA 72 bp AGAATAGAAGCCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTA +
Preference number: 6 (lower is better)
Translates to: RIEAICKRIKTL*GNYHGPPMLFV
Trigger: TACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409915.8
ENST00000414963.2
CDS CAA 72 bp AGTCATCGTCATCATCTTCAAGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAAATCTGCTGTCACTTC +
Preference number: 6 (lower is better)
Translates to: SHRHHLQVQLQQ*MSRIQQICCHF
Trigger: GAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CAA 90 bp ATAAATTTCCTGGTCATAATAACCTGTAGAATCGAGGCCCACTCCTaGAGCTTCATCAAGAGCTGCCTTCTTGCCTTGAATTTCTCGAAT +
Preference number: 6 (lower is better)
Translates to: INFLVIITCRIEAHS*SFIKSCLLALNFSN
Trigger: ATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTCGATTCTACAGGTTATTATGACCAGGAAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS GCA 72 bp CAGTTGCAGCAATTGATGTCACGTATCCAGCAAATCTaGTGTCACTTCCACCATAAATTTCCTGGTCATAAT +
Preference number: 6 (lower is better)
Translates to: QLQQLMSRIQQI*CHFHHKFPGHN
Trigger: ATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTGCAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CCA 72 bp GATGGGGGTGAGTCTAGGCAGCAGATCTTTAATTGGTaGAGTCATCTTATGCATACCTATTTAATAGAAGTC +
Preference number: 6 (lower is better)
Translates to: DGGESRQQIFNW*SHLMHTYLIEV
Trigger: GACTTCTATTAAATAGGTATGCATAAGATGACTCCACCAATTAAAGATCTGCTGCCTAGACTCACCCCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496458.1
CDS CAA 90 bp ATGATGAATAGTCATCGTCATCATCTTCAAGTTCAGTTGCAGCAATaGATGTCACGTATCCAGCAAATCTGCTGTCACTTCCACCATAAA +
Preference number: 6 (lower is better)
Translates to: MMNSHRHHLQVQLQQ*MSRIQQICCHFHHK
Trigger: TTTATGGTGGAAGTGACAGCAGATTTGCTGGATACGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGACTATTCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1
CDS CAA 72 bp ATGATGAATAGTCATCGTCATCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACGTATCCAGCAAATCTGC +
Preference number: 6 (lower is better)
Translates to: MMNSHRHHLQVQ*QQLMSRIQQIC
Trigger: GCAGATTTGCTGGATACGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGACTATTCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335508.11
ENST00000409915.8
ENST00000414963.2
ENST00000470268.2
ENST00000487698.5
ENST00000652026.1
ENST00000652738.1