Pregenerated sensors for SF3A2 (Homo sapiens)
Ensembl gene IDs: ENSG00000104897Ensembl transcript IDs: ENST00000586396.2, ENST00000587637.2, ENST00000589118.5, ENST00000590034.2, ENST00000592314.5, ENST00000592839.6
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GGGCCCAGCCTGACAGCTCCCAGACACAACGCCAGAGGCTGCAGGTaGGTGAGGGACGGCCACCAAGGCCGGAAAACAGTGGCTCAGGGA | + |
Preference number: 5 (lower is better) Translates to: GPSLTAPRHNARGCR*VRDGHQGRKTVAQG Trigger: TCCCTGAGCCACTGTTTTCCGGCCTTGGTGGCCGTCCCTCACCCACCTGCAGCCTCTGGCGTTGTGTCTGGGAGCTGTCAGGCTGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS TCA 90 bp | GGCTCCCCGGCTGTGGAGCAGTGGCCCGCGAGGCTCACAGAGACTTaGGCCAACGGCTGCTGGAGCACCAGGCATCAAAGGGACATGAGG | + |
Preference number: 5 (lower is better) Translates to: GSPAVEQWPARLTET*ANGCWSTRHQRDMR Trigger: CCTCATGTCCCTTTGATGCCTGGTGCTCCAGCAGCCGTTGGCTCAAGTCTCTGTGAGCCTCGCGGGCCACTGCTCCACAGCCGGGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589118.5 ENST00000590034.2 |
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CDS GCA 90 bp | CTTATCGGGCCCAGCCTGACAGCTCCCAGACACAACGCCAGAGGCTaGAGGTGGGTGAGGGACGGCCACCAAGGCCGGAAAACAGTGGCT | + |
Preference number: 5 (lower is better) Translates to: LIGPSLTAPRHNARG*RWVRDGHQGRKTVA Trigger: AGCCACTGTTTTCCGGCCTTGGTGGCCGTCCCTCACCCACCTGCAGCCTCTGGCGTTGTGTCTGGGAGCTGTCAGGCTGGGCCCGATAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS GCA 90 bp | ACCCGGACAGGAGGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTaGTGGGTGAGATGGGTGCTTATCGGGCCCAGCCTGACAGCTCCC | + |
Preference number: 5 (lower is better) Translates to: TRTGGHRLWLSWEMG*WVRWVLIGPSLTAP Trigger: GGGAGCTGTCAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCCTGTCCGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CCA 90 bp | GGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTGCTGGGTGAGATaGGTGCTTATCGGGCCCAGCCTGACAGCTCCCAGACACAACGCC | + |
Preference number: 5 (lower is better) Translates to: GHRLWLSWEMGCWVR*VLIGPSLTAPRHNA Trigger: GGCGTTGTGTCTGGGAGCTGTCAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CCA 90 bp | CGGACAGGAGGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTGCTaGGTGAGATGGGTGCTTATCGGGCCCAGCCTGACAGCTCCCAGA | + |
Preference number: 5 (lower is better) Translates to: RTGGHRLWLSWEMGC*VRWVLIGPSLTAPR Trigger: TCTGGGAGCTGTCAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCCTGTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CCA 90 bp | AACAGTGGCTCAGGGAGGAGGCTATCAGGGCTGCACCTCCCGCACTaGAGACTAAAGAACACACTTATGTCACGGCAGCGGCTGTGGCCG | + |
Preference number: 5 (lower is better) Translates to: NSGSGRRLSGLHLPH*RLKNTLMSRQRLWP Trigger: CGGCCACAGCCGCTGCCGTGACATAAGTGTGTTCTTTAGTCTCCAGTGCGGGAGGTGCAGCCCTGATAGCCTCCTCCCTGAGCCACTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CCA 90 bp | AGCAGACTGGGAGACACCTATTTTCCAGAGCTCCGCCTGGCTGTTTaGTGTCGTCCAAGGATACACAAGAACAACGGTCACAGCGGGGTG | + |
Preference number: 5 (lower is better) Translates to: SRLGDTYFPELRLAV*CRPRIHKNNGHSGV Trigger: CACCCCGCTGTGACCGTTGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCCCAGTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586396.2 |
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CDS TCA 72 bp | CTCGAGGCCGGGCGGACAGACACAGGCAGGTCCCCCTaGCGTCAGCCACTCAGCCCGCCGCGAGCCGCCCGG | + |
Preference number: 6 (lower is better) Translates to: LEAGRTDTGRSP*RQPLSPPRAAR Trigger: CCGGGCGGCTCGCGGCGGGCTGAGTGGCTGACGTCAGGGGGACCTGCCTGTGTCTGTCCGCCCGGCCTCGAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590034.2 |
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CDS GCA 72 bp | CACTTATGTCACGGCAGCGGCTGTGGCCGGCCCCGCTaGGGGCAGACTCACCTTTGTAGCCCGGGCGGCCGA | + |
Preference number: 6 (lower is better) Translates to: HLCHGSGCGRPR*GQTHLCSPGGR Trigger: TCGGCCGCCCGGGCTACAAAGGTGAGTCTGCCCGCAGCGGGGCCGGCCACAGCCGCTGCCGTGACATAAGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CAA 90 bp | TGGCTCCCCGGCTGTGGAGCAGTGGCCCGCGAGGCTCACAGAGACTaGAGCCAACGGCTGCTGGAGCACCAGGCATCAAAGGGACATGAG | + |
Preference number: 6 (lower is better) Translates to: WLPGCGAVAREAHRD*SQRLLEHQASKGHE Trigger: CTCATGTCCCTTTGATGCCTGGTGCTCCAGCAGCCGTTGGCTCAAGTCTCTGTGAGCCTCGCGGGCCACTGCTCCACAGCCGGGGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589118.5 ENST00000590034.2 |
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CDS TCA 72 bp | CCAGGTAGCTCCCCTGGAGTGGAAAGGAAACACGCATaGCTCGAGGCCGGGCGGACAGACACAGGCAGGTCC | + |
Preference number: 6 (lower is better) Translates to: PGSSPGVERKHA*LEAGRTDTGRS Trigger: GGACCTGCCTGTGTCTGTCCGCCCGGCCTCGAGTCATGCGTGTTTCCTTTCCACTCCAGGGGAGCTACCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590034.2 |
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CDS GCA 72 bp | CCCAAGCCCGATGGGAGGGGCATCCTGCCCAGCCTATaGAGATCCTTCTGGCTTGCACATCTCAAGGGGGCC | + |
Preference number: 6 (lower is better) Translates to: PKPDGRGILPSL*RSFWLAHLKGA Trigger: GGCCCCCTTGAGATGTGCAAGCCAGAAGGATCTGCATAGGCTGGGCAGGATGCCCCTCCCATCGGGCTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587637.2 |
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CDS GCA 72 bp | GGAGGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTaGTGGGTGAGATGGGTGCTTATCGGGCCCAGCCTG | + |
Preference number: 6 (lower is better) Translates to: GGHRLWLSWEMG*WVRWVLIGPSL Trigger: CAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS GCA 72 bp | GCCCAAGTCCCTGATCTCACCTGGAAGAGGAGGCTCTaGTGGCCCATCTCCGAGTCTCTCTGCTTGGTCACT | + |
Preference number: 6 (lower is better) Translates to: AQVPDLTWKRRL*WPISESLCLVT Trigger: AGTGACCAAGCAGAGAGACTCGGAGATGGGCCAGCAGAGCCTCCTCTTCCAGGTGAGATCAGGGACTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587637.2 ENST00000592314.5 |
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CDS CCA 72 bp | AAGACCCGGACAGGAGGGCACAGACTGTGGCTCAGCTaGGAAATGGGCTGCTGGGTGAGATGGGTGCTTATC | + |
Preference number: 6 (lower is better) Translates to: KTRTGGHRLWLS*EMGCWVRWVLI Trigger: GATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCCTGTCCGGGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CCA 72 bp | TCAGGGAGGAGGCTATCAGGGCTGCACCTCCCGCACTaGAGACTAAAGAACACACTTATGTCACGGCAGCGG | + |
Preference number: 6 (lower is better) Translates to: SGRRLSGLHLPH*RLKNTLMSRQR Trigger: CCGCTGCCGTGACATAAGTGTGTTCTTTAGTCTCCAGTGCGGGAGGTGCAGCCCTGATAGCCTCCTCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592839.6 |
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CDS CCA 72 bp | CAAGTCCCTGATCTCACCTGGAAGAGGAGGCTCTGCTaGCCCATCTCCGAGTCTCTCTGCTTGGTCACTTTG | + |
Preference number: 6 (lower is better) Translates to: QVPDLTWKRRLC*PISESLCLVTL Trigger: CAAAGTGACCAAGCAGAGAGACTCGGAGATGGGCCAGCAGAGCCTCCTCTTCCAGGTGAGATCAGGGACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587637.2 ENST00000592314.5 |
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CDS CCA 72 bp | GGAGACACCTATTTTCCAGAGCTCCGCCTGGCTGTTTaGTGTCGTCCAAGGATACACAAGAACAACGGTCAC | + |
Preference number: 6 (lower is better) Translates to: GDTYFPELRLAV*CRPRIHKNNGH Trigger: GTGACCGTTGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586396.2 |
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CDS CCA 72 bp | GCAGACTGGGAGACACCTATTTTCCAGAGCTCCGCCTaGCTGTTTGGTGTCGTCCAAGGATACACAAGAACA | + |
Preference number: 6 (lower is better) Translates to: ADWETPIFQSSA*LFGVVQGYTRT Trigger: TGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCCCAGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586396.2 |
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CDS CAA 72 bp | GGGAGACACCTATTTTCCAGAGCTCCGCCTGGCTGTTaGGTGTCGTCCAAGGATACACAAGAACAACGGTCA | + |
Preference number: 6 (lower is better) Translates to: GRHLFSRAPPGC*VSSKDTQEQRS Trigger: TGACCGTTGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586396.2 |