RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SF3A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000104897

Ensembl transcript IDs: ENST00000586396.2, ENST00000587637.2, ENST00000589118.5, ENST00000590034.2, ENST00000592314.5, ENST00000592839.6

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGGCCCAGCCTGACAGCTCCCAGACACAACGCCAGAGGCTGCAGGTaGGTGAGGGACGGCCACCAAGGCCGGAAAACAGTGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GPSLTAPRHNARGCR*VRDGHQGRKTVAQG
Trigger: TCCCTGAGCCACTGTTTTCCGGCCTTGGTGGCCGTCCCTCACCCACCTGCAGCCTCTGGCGTTGTGTCTGGGAGCTGTCAGGCTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS TCA 90 bp GGCTCCCCGGCTGTGGAGCAGTGGCCCGCGAGGCTCACAGAGACTTaGGCCAACGGCTGCTGGAGCACCAGGCATCAAAGGGACATGAGG +
Preference number: 5 (lower is better)
Translates to: GSPAVEQWPARLTET*ANGCWSTRHQRDMR
Trigger: CCTCATGTCCCTTTGATGCCTGGTGCTCCAGCAGCCGTTGGCTCAAGTCTCTGTGAGCCTCGCGGGCCACTGCTCCACAGCCGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589118.5
ENST00000590034.2
CDS GCA 90 bp CTTATCGGGCCCAGCCTGACAGCTCCCAGACACAACGCCAGAGGCTaGAGGTGGGTGAGGGACGGCCACCAAGGCCGGAAAACAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LIGPSLTAPRHNARG*RWVRDGHQGRKTVA
Trigger: AGCCACTGTTTTCCGGCCTTGGTGGCCGTCCCTCACCCACCTGCAGCCTCTGGCGTTGTGTCTGGGAGCTGTCAGGCTGGGCCCGATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS GCA 90 bp ACCCGGACAGGAGGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTaGTGGGTGAGATGGGTGCTTATCGGGCCCAGCCTGACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: TRTGGHRLWLSWEMG*WVRWVLIGPSLTAP
Trigger: GGGAGCTGTCAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCCTGTCCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CCA 90 bp GGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTGCTGGGTGAGATaGGTGCTTATCGGGCCCAGCCTGACAGCTCCCAGACACAACGCC +
Preference number: 5 (lower is better)
Translates to: GHRLWLSWEMGCWVR*VLIGPSLTAPRHNA
Trigger: GGCGTTGTGTCTGGGAGCTGTCAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CCA 90 bp CGGACAGGAGGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTGCTaGGTGAGATGGGTGCTTATCGGGCCCAGCCTGACAGCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: RTGGHRLWLSWEMGC*VRWVLIGPSLTAPR
Trigger: TCTGGGAGCTGTCAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCCTGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CCA 90 bp AACAGTGGCTCAGGGAGGAGGCTATCAGGGCTGCACCTCCCGCACTaGAGACTAAAGAACACACTTATGTCACGGCAGCGGCTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: NSGSGRRLSGLHLPH*RLKNTLMSRQRLWP
Trigger: CGGCCACAGCCGCTGCCGTGACATAAGTGTGTTCTTTAGTCTCCAGTGCGGGAGGTGCAGCCCTGATAGCCTCCTCCCTGAGCCACTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CCA 90 bp AGCAGACTGGGAGACACCTATTTTCCAGAGCTCCGCCTGGCTGTTTaGTGTCGTCCAAGGATACACAAGAACAACGGTCACAGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: SRLGDTYFPELRLAV*CRPRIHKNNGHSGV
Trigger: CACCCCGCTGTGACCGTTGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCCCAGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586396.2
CDS TCA 72 bp CTCGAGGCCGGGCGGACAGACACAGGCAGGTCCCCCTaGCGTCAGCCACTCAGCCCGCCGCGAGCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: LEAGRTDTGRSP*RQPLSPPRAAR
Trigger: CCGGGCGGCTCGCGGCGGGCTGAGTGGCTGACGTCAGGGGGACCTGCCTGTGTCTGTCCGCCCGGCCTCGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590034.2
CDS GCA 72 bp CACTTATGTCACGGCAGCGGCTGTGGCCGGCCCCGCTaGGGGCAGACTCACCTTTGTAGCCCGGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: HLCHGSGCGRPR*GQTHLCSPGGR
Trigger: TCGGCCGCCCGGGCTACAAAGGTGAGTCTGCCCGCAGCGGGGCCGGCCACAGCCGCTGCCGTGACATAAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CAA 90 bp TGGCTCCCCGGCTGTGGAGCAGTGGCCCGCGAGGCTCACAGAGACTaGAGCCAACGGCTGCTGGAGCACCAGGCATCAAAGGGACATGAG +
Preference number: 6 (lower is better)
Translates to: WLPGCGAVAREAHRD*SQRLLEHQASKGHE
Trigger: CTCATGTCCCTTTGATGCCTGGTGCTCCAGCAGCCGTTGGCTCAAGTCTCTGTGAGCCTCGCGGGCCACTGCTCCACAGCCGGGGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589118.5
ENST00000590034.2
CDS TCA 72 bp CCAGGTAGCTCCCCTGGAGTGGAAAGGAAACACGCATaGCTCGAGGCCGGGCGGACAGACACAGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: PGSSPGVERKHA*LEAGRTDTGRS
Trigger: GGACCTGCCTGTGTCTGTCCGCCCGGCCTCGAGTCATGCGTGTTTCCTTTCCACTCCAGGGGAGCTACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590034.2
CDS GCA 72 bp CCCAAGCCCGATGGGAGGGGCATCCTGCCCAGCCTATaGAGATCCTTCTGGCTTGCACATCTCAAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: PKPDGRGILPSL*RSFWLAHLKGA
Trigger: GGCCCCCTTGAGATGTGCAAGCCAGAAGGATCTGCATAGGCTGGGCAGGATGCCCCTCCCATCGGGCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587637.2
CDS GCA 72 bp GGAGGGCACAGACTGTGGCTCAGCTGGGAAATGGGCTaGTGGGTGAGATGGGTGCTTATCGGGCCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: GGHRLWLSWEMG*WVRWVLIGPSL
Trigger: CAGGCTGGGCCCGATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS GCA 72 bp GCCCAAGTCCCTGATCTCACCTGGAAGAGGAGGCTCTaGTGGCCCATCTCCGAGTCTCTCTGCTTGGTCACT +
Preference number: 6 (lower is better)
Translates to: AQVPDLTWKRRL*WPISESLCLVT
Trigger: AGTGACCAAGCAGAGAGACTCGGAGATGGGCCAGCAGAGCCTCCTCTTCCAGGTGAGATCAGGGACTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587637.2
ENST00000592314.5
CDS CCA 72 bp AAGACCCGGACAGGAGGGCACAGACTGTGGCTCAGCTaGGAAATGGGCTGCTGGGTGAGATGGGTGCTTATC +
Preference number: 6 (lower is better)
Translates to: KTRTGGHRLWLS*EMGCWVRWVLI
Trigger: GATAAGCACCCATCTCACCCAGCAGCCCATTTCCCAGCTGAGCCACAGTCTGTGCCCTCCTGTCCGGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CCA 72 bp TCAGGGAGGAGGCTATCAGGGCTGCACCTCCCGCACTaGAGACTAAAGAACACACTTATGTCACGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: SGRRLSGLHLPH*RLKNTLMSRQR
Trigger: CCGCTGCCGTGACATAAGTGTGTTCTTTAGTCTCCAGTGCGGGAGGTGCAGCCCTGATAGCCTCCTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592839.6
CDS CCA 72 bp CAAGTCCCTGATCTCACCTGGAAGAGGAGGCTCTGCTaGCCCATCTCCGAGTCTCTCTGCTTGGTCACTTTG +
Preference number: 6 (lower is better)
Translates to: QVPDLTWKRRLC*PISESLCLVTL
Trigger: CAAAGTGACCAAGCAGAGAGACTCGGAGATGGGCCAGCAGAGCCTCCTCTTCCAGGTGAGATCAGGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587637.2
ENST00000592314.5
CDS CCA 72 bp GGAGACACCTATTTTCCAGAGCTCCGCCTGGCTGTTTaGTGTCGTCCAAGGATACACAAGAACAACGGTCAC +
Preference number: 6 (lower is better)
Translates to: GDTYFPELRLAV*CRPRIHKNNGH
Trigger: GTGACCGTTGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586396.2
CDS CCA 72 bp GCAGACTGGGAGACACCTATTTTCCAGAGCTCCGCCTaGCTGTTTGGTGTCGTCCAAGGATACACAAGAACA +
Preference number: 6 (lower is better)
Translates to: ADWETPIFQSSA*LFGVVQGYTRT
Trigger: TGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCCCAGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586396.2
CDS CAA 72 bp GGGAGACACCTATTTTCCAGAGCTCCGCCTGGCTGTTaGGTGTCGTCCAAGGATACACAAGAACAACGGTCA +
Preference number: 6 (lower is better)
Translates to: GRHLFSRAPPGC*VSSKDTQEQRS
Trigger: TGACCGTTGTTCTTGTGTATCCTTGGACGACACCAAACAGCCAGGCGGAGCTCTGGAAAATAGGTGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586396.2