RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEZ6L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174938

Ensembl transcript IDs: ENST00000308713.9, ENST00000346932.9, ENST00000350527.7, ENST00000537485.5, ENST00000562159.1, ENST00000563118.1, ENST00000568380.1, ENST00000568407.2, ENST00000617533.4, ENST00000617533.5

Found 522 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGAGAAGAGGCGGCTTTaGGCGGCAGGATGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQEKRRL*AAGCWF
Trigger: AAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTCCCGTATTTCCCTCTaGCCGAATGAGGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDSRISL*PNEEGR
Trigger: CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTCCCGTATTTCCCTCTaGCCGAATGAGGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGSRISL*PNEEGR
Trigger: CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGA...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCATCCCGTATTTCCCTCTaGCCGAATGAGGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPSRISL*PNEEGR
Trigger: CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGA...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCTTTGGGCGGCAGGATaGTGGTTTATTTACTGTAGG +
Preference number: 2 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDLWAAG*WFIYCR
Trigger: CCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTGGGCGGCAGGATGCTaGTTTATTTACTGTAGGATC +
Preference number: 2 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDWAAGC*FIYCRI
Trigger: GATCCTACAGTAAATAAACCAGCATCCTGCCGCCCA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR TCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACCCTCGTTTGGCAACTaGGAAGAGGCGGCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRPSFGN*EEAALG
Trigger: GCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGGG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTATCAAAGCCCCCTCGTaGGATAGGGAGACTATTTAC +
Preference number: 2 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIIKAPS*DRETIY
Trigger: GTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGAT...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATCCCGTATTTCCCTCTaGCCGAATGAGGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRSRISL*PNEEGR
Trigger: CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAATCAAAGCCCCCTCGTaGGATAGGGAGACTATTTAC +
Preference number: 2 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGIKAPS*DRETIY
Trigger: GTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGAT...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR TCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCCCTCGTTTGGCAACTaGGAAGAGGCGGCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWPSFGN*EEAALG
Trigger: GCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGGG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTCCCGTATTTCCCTCTaGCCGAATGAGGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWSRISL*PNEEGR
Trigger: CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGATCAAAGCCCCCTCGTaGGATAGGGAGACTATTTAC +
Preference number: 2 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWIKAPS*DRETIY
Trigger: GTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGAT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTATCGGGGGCAGTCCTaGAGGGGTGCCCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDYRGQS*RGALGR
Trigger: CCTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGAGGGGCTGCAAGATTaGCAGGGAGGCAGAGTTCCC +
Preference number: 3 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDEGLQD*QGGRVP
Trigger: GGGAACTCTGCCTCCCTGCAAATCTTGCAGCCCCTC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR CCA 72 bp CAGGCCCCTCGTTTGGCAACTGAGAAGAGGCGGCTTTaGGCGGCAGGATGCTGGTTTATTTACTGTAGGATC +
Preference number: 3 (lower is better)
Translates to: QAPRLATEKRRL*AAGCWFIYCRI
Trigger: GATCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGGGCAGGCCCCTCGTTaGGCAACTGAGAAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRGQAPR*ATEKRR
Trigger: CCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCCC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTATCGGGGGCAGTCCTaGAGGGGTGCCCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWYRGQS*RGALGR
Trigger: CCTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
3UTR-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGAAGGGGGCAAGGCCTaGTCCCAGCTCTCCCCTTTG +
Preference number: 3 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWEGGKA*SQLSPL
Trigger: CAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.4
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTCCGGCTGCAGGGGGTaGGGCCGAGAGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRSGCRG*GREGRR
Trigger: CCTTCGGCCCTCTCGGCCCCACCCCCTGCAGCCGGA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGCGGGTGCTGGGCCCTaGGAGTCCCCATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEAGAGP*ESPWRL
Trigger: GAGTCGCCATGGGGACTCCCAGGGCCCAGCACCCGC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGCCGGCCGGAGGGGTaGCTAGCGTGGGGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEGRPEG*LAWGPD
Trigger: ATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACGGCTCAGTGGCCCGTaGCAGGGAGGGCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPERLSGP*QGGHCE
Trigger: CTCGCAGTGCCCTCCCTGCCACGGGCCACTGAGCCG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGCCCAGGCCTGGATTTaGGGGCCCGGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEAQAWI*GPGRCL
Trigger: CAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGGCTGGCTGGTCCACTaGGAGGGGTGGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEGWLVH*EGWPGT
Trigger: TGTGCCCGGCCACCCCTCCCAGTGGACCAGCCAGCC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACGGCGTCCGAGGCGGTaGGGTGCCCGTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPERRPRR*GARWQS
Trigger: AGATTGCCAACGGGCACCGCACCGCCTCGGACGCCG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCTTCTCGCGGCTCTGTaGTGGAGGGGGCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEELLAAL*WRGRGS
Trigger: GGAGCCGCGCCCCCTCCACCACAGAGCCGCGAGAAG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGGCACTGCGAGAGTCTaGCCGGCCGGAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRGTARV*PAGGVA
Trigger: AGCCACCCCTCCGGCCGGCCAGACTCTCGCAGTGCC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCGGGGTCAGCAGTTCTaGCGCAGTGGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRRGQQF*RSGACP
Trigger: GGGGCAGGCCCCACTGCGCCAGAACTGCTGACCCCG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGCCCCACTCCGGAGGTaGCAGCTCGGGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQAPLRR*QLGARV
Trigger: GACACGTGCCCCGAGCTGCCACCTCCGGAGTGGGGC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGCCCCACTCCGGAGGTaGCAGCTCGGGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEAPLRR*QLGARV
Trigger: GACACGTGCCCCGAGCTGCCACCTCCGGAGTGGGGC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGCTGGCTGGTCCACTaGGAGGGGTGGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGWLVH*EGWPGT
Trigger: TGTGCCCGGCCACCCCTCCCAGTGGACCAGCCAGCC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGCCCGGGCGGTGCCTaGAACTGCAGTGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGPGGA*NCSVRS
Trigger: CGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGACACTCACGTCCCCATaGGCCGGCCGGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEETLTSP*AGRGGK
Trigger: CTTCCCTCCCCGGCCGGCCCATGGGGACGTGAGTGT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACCAAGACTCGGGCGCTaGGACCGTCCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEPRLGR*DRPRRT
Trigger: TGTTCGACGGGGACGGTCCCAGCGCCCGAGTCTTGG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACAGCGGTACTGGACGTaGGAGCCAACGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEQRYWT*EPTGKP
Trigger: CGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGGCAGGCAGCGGTACTaGACGTGGGAGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRGRQRY*TWEPTG
Trigger: CCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGAGAGTGGGGGCTGGCTaGTCCACTGGGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEERVGAG*STGRGG
Trigger: GCCACCCCTCCCAGTGGACCAGCCAGCCCCCACTCT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCTCAGCAGGGCCCCATaGAGCAGTTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQLSRAP*SSSARA
Trigger: GGCCCTGGCTGAACTGCTTCATGGGGCCCTGCTGAG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR TCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGCTCGCACTGGTAGGTaGGCACCGTGCCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRARTGR*APCPGS
Trigger: TGATCCGGGGCACGGTGCTCACCTACCAGTGCGAGC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAAGTCCGACTCCACGGTaGTGGGGCTGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPESPTPR*WGCRSG
Trigger: CCCACTCCTACAGCCCCATCACCGTGGAGTCGGACT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGCAGTGCCCCCAGGGTaGAGGTCCGTCACACTCACG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRAVPPG*RSVTLT
Trigger: CGTGAGTGTGACGGACCTGCACCCTGGGGGCACTGC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGCAGTGCCCCCAGGGTaGAGGTCCGTCACACTCACG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQAVPPG*RSVTLT
Trigger: CGTGAGTGTGACGGACCTGCACCCTGGGGGCACTGC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAAGTGAAAGGTGGCAGTaGCCCCAGGGTGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPESERWQ*PQGAGP
Trigger: CGGACCTGCACCCTGGGGGCACTGCCACCTTTCACT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCAGGTCCCCGTGGGATaGCGTTCTCCAGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEQVPVG*RSPAPL
Trigger: GAGTGGGGCTGGAGAACGGCATCCCACGGGGACCTG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGCAGGTGAGCATGGCTaGCCCCTCGAGGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEAGEHG*PLEAVP
Trigger: GGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGTGGGTTGGGGAACTaGGAGAGCCGAAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGGLGN*ESRSSG
Trigger: GCCCGAGCTTCGGCTCTCCCAGTTCCCCAACCCACC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACCCTGGGAGTCCCCATaGCGACTCACCCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEPWESP*RLTPIS
Trigger: AGAGATCGGGGTGAGTCGCCATGGGGACTCCCAGGG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAATTAGGAACAGCAGCTaGGGAGGCGGCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEIRNSS*GGGGCW
Trigger: CCAGCACCCGCCGCCTCCCCAGCTGCTGTTCCTAAT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCTGTCCCCGGCTCAGTaGCCCGTGGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDLSPAQ*PVAGRA
Trigger: TGCCCTCCCTGCCACGGGCCACTGAGCCGGGGACAG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGACCCGTGGGCTCTaGAAGTGCAGAAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEGTRGL*KCRSSR
Trigger: CCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGAAGCCACCGCCCCTTaGGACCCGTGGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGREATAP*DPWALE
Trigger: TTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGAAGCCACCGCCCCTTaGGACCCGTGGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQEATAP*DPWALE
Trigger: TTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACACATTCGATGGCATTaGGGGGCCCAGGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEHIRWH*GAQGAP
Trigger: TGGAGCCCCCTGGGCCCCCCAATGCCATCGAATGTG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGAGGACCACGCCAGCTaGTTCCGACAGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEEDHAS*FRQLPS
Trigger: GGAGGGGAGCTGTCGGAACCAGCTGGCGTGGTCCTC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCGGTGCGGTGCCCGTTaGCAATCTCGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEERCGAR*QSRQGQ
Trigger: CTGACCCTGGCGAGATTGCCAACGGGCACCGCACCG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCGGTGCGGTGCCCGTTaGCAATCTCGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQRCGAR*QSRQGQ
Trigger: CTGACCCTGGCGAGATTGCCAACGGGCACCGCACCG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACCCTATCGCTCCACTTaGGTGTGCCTGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEPYRST*VCLCPG
Trigger: GCCGGGACACAGGCACACCCAAGTGGAGCGATAGGG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGTCCACTGGGAGGGGTaGCCGGGCACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRVHWEG*PGTQVM
Trigger: CATCACCTGTGTGCCCGGCCACCCCTCCCAGTGGAC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGTCCACTGGGAGGGGTaGCCGGGCACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEVHWEG*PGTQVM
Trigger: CATCACCTGTGTGCCCGGCCACCCCTCCCAGTGGAC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGTCCACTGGGAGGGGTaGCCGGGCACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQVHWEG*PGTQVM
Trigger: CATCACCTGTGTGCCCGGCCACCCCTCCCAGTGGAC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGGCAGGCCCCTCGTTTaGCAACTGAGAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEGRPLV*QLRRGG
Trigger: GCCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGAGTCCGACTCCACGGTaGTGGGGCTGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRSPTPR*WGCRSG
Trigger: CCCACTCCTACAGCCCCATCACCGTGGAGTCGGACT...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCCGGCGCCCCTCAGCTaGTTCAATGACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEPAPLS*FNDPTA
Trigger: TGCCGTTGGGTCATTGAAGCAGCTGAGGGGCGCCGG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGAGACCCTTTCAAAGTaGAGGTGCAGCCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEETLSK*RCSRRP
Trigger: GGGGCGCCGGCTGCACCTGCACTTTGAAAGGGTCTC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGAGGCACGAGAAGGTTaGCAGTGCCCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEEAREG*QCPWAI
Trigger: TATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCGGCGTCCGAGGCGGTaGGGTGCCCGTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDRRPRR*GARWQS
Trigger: AGATTGCCAACGGGCACCGCACCGCCTCGGACGCCG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCGCTCCACTTGGGTGTaGCTGTGTCCCGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQRSTWV*LCPGCS
Trigger: GCTACAGCCGGGACACAGGCACACCCAAGTGGAGCG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGGTCTGGGTCACTTTaGAGAGTGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEWSGSL*RVGAGW
Trigger: CCAGCCAGCCCCCACTCTGCAAAGTGACCCAGACCA...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGCCGAAGGGGCCGGGTaGCCTGGGTTACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGAEGAG*PGLPSC
Trigger: GCAGGAGGGTAACCCAGGCCACCCGGCCCCTTCGGC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGCGGGTGCTGGGCCCTaGGAGTCCCCATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGAGAGP*ESPWRL
Trigger: GAGTCGCCATGGGGACTCCCAGGGCCCAGCACCCGC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGATTAGGAACAGCAGCTaGGGAGGCGGCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRIRNSS*GGGGCW
Trigger: CCAGCACCCGCCGCCTCCCCAGCTGCTGTTCCTAAT...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCGATGCGGCCCAGGGTaGCATTGTGGATGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEERCGPG*HCGWCH
Trigger: GTGGCACCATCCACAATGCCACCCTGGGCCGCATCG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGTTGCCAGTGCCCCTaGGCGATACTCAGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGCQCP*AILRVR
Trigger: ACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCACATTCGATGGCATTaGGGGGCCCAGGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQHIRWH*GAQGAP
Trigger: TGGAGCCCCCTGGGCCCCCCAATGCCATCGAATGTG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCAAGTCATGATCTTTTaGCAGGCGGGCGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEQVMIF*QAGGAA
Trigger: CGCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCAAGTCATGATCTTTTaGCAGGCGGGCGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRQVMIF*QAGGAA
Trigger: CGCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCTCGAGGCTGTACCCTaGCAGGCAGCGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEELEAVP*QAAVLD
Trigger: GTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGGCAGGCCCCTCGTTTaGCAACTGAGAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRGRPLV*QLRRGG
Trigger: GCCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGCTCAGGAGGTAGGCTaGGCTGGTCACCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEAQEVG*AGHRSG
Trigger: ACCACTACGGTGACCAGCCCAGCCTACCTCCTGAGC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346932.9
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGAGGGGTGGCTAGCGTaGGGTCCCGATCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQEGWLA*GPDQIP
Trigger: AGGGATCTGATCGGGACCCCACGCTAGCCACCCCTC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537485.5
CDS-3UTR TCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGAGCTCCTCTTCCTGTaGCAGGTTCAGCGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEELLFL*QVQRLH
Trigger: GTGCAGACGCTGAACCTGTCACAGGAAGAGGAGCTC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCCTGATAGTGGATCCTaGAGCCACCGCCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEPDSGS*SHRPLG
Trigger: TCCCAAGGGGCGGTGGCTTCAGGATCCACTATCAGG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCCTGATAGTGGATCCTaGAGCCACCGCCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRPDSGS*SHRPLG
Trigger: TCCCAAGGGGCGGTGGCTTCAGGATCCACTATCAGG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGGTCCCACTGGCAAGTaGGAATGTCGGAGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEGPTGK*ECRSLA
Trigger: TGCTAGGCTCCGACATTCTCACTTGCCAGTGGGACC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCCCTTCCAGCTGCCGTaGTGGATCTGTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQPFQLP*WICGLG
Trigger: ACCCAGACCACAGATCCATCACGGCAGCTGGAAGGG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACATGGATGCTGTAAGTaGAGTCCAGGAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEHGCCK*SPGAPG
Trigger: CCCTGGGGCTCCTGGACTGCACTTACAGCATCCATG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGGTGCCACCACAGGATaGCATGCAGCTGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRGATTG*HAAGGF
Trigger: GAAACCCCCAGCTGCATGGCATCCTGTGGTGGCACC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGTGCCACCACAGGATaGCATGCAGCTGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGATTG*HAAGGF
Trigger: GAAACCCCCAGCTGCATGGCATCCTGTGGTGGCACC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCTTTCAAAGTGCAGGTaGAGCCGGCGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRLSKCR*SRRPSA
Trigger: AGCTGAGGGGCGCCGGCTGCACCTGCACTTTGAAAG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTGGGGGCCCGGGCGGTaGCTGAAACTGCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDWGPGR*LKLQCE
Trigger: CTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCAGGTCCCCGTGGGATaGCGTTCTCCAGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDQVPVG*RSPAPL
Trigger: GAGTGGGGCTGGAGAACGGCATCCCACGGGGACCTG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTCCGAGGCGGTGCGGTaGCCGTTGGCAATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDSEAVR*PLAISP
Trigger: TGGCGAGATTGCCAACGGGCACCGCACCGCCTCGGA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGGGCGTCCTGGGTCCTaGAGCTGTAGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRGRPGS*SCSLGV
Trigger: AACCCCAAGACTACAGCTGCAGGACCCAGGACGCCC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGGCGTCCTGGGTCCTaGAGCTGTAGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGRPGS*SCSLGV
Trigger: AACCCCAAGACTACAGCTGCAGGACCCAGGACGCCC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGCCGGCCGGAGGGGTaGCTAGCGTGGGGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPGRPEG*LAWGPD
Trigger: ATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGCCGGCCGGAGGGGTaGCTAGCGTGGGGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGRPEG*LAWGPD
Trigger: ATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGACACTCACGTCCCCATaGGCCGGCCGGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGTLTSP*AGRGGK
Trigger: CTTCCCTCCCCGGCCGGCCCATGGGGACGTGAGTGT...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAAGGATGCCATGCAGCTaGGGGTTTCACCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPERMPCS*GFHRSR
Trigger: CCTGGAACGGTGAAACCCCCAGCTGCATGGCATCCT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAACTCCAGGGCATATCCTaGGAGGCACGAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPELQGIS*EAREGC
Trigger: GCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAG...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGATGCGCTTCTCTTCCTaGACGTGCACGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQMRFSS*TCTPHT
Trigger: CGTGTGGGGCGTGCACGTCCAGGAAGAGAAGCGCAT...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGCCCAGGCCTGGATTTaGGGGCCCGGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPAQAWI*GPGRCL
Trigger: CAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCGGATCAGGTCCCCGTaGGATGCCGTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDRIRSP*DAVLQP
Trigger: GGGCTGGAGAACGGCATCCCACGGGGACCTGATCCG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGGCAGGCAGCGGTACTaGACGTGGGAGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGGRQRY*TWEPTG
Trigger: CCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGAGAAGAGGCGGCTTTaGGCGGCAGGATGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEEKRRL*AAGCWF
Trigger: AAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTTCTCCAAGCATGGATaGGTTGGCCAGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRFSKHG*VGQESG
Trigger: CCCCGACTCCTGGCCAACTCATCCATGCTTGGAGAA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGCTCGCACTGGTAGGTaGGCACCGTGCCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGARTGR*APCPGS
Trigger: TGATCCGGGGCACGGTGCTCACCTACCAGTGCGAGC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTGGCAGGGAGGGCACTaGGAGAGTCTGGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIWQGGH*ESLAGR
Trigger: CCGGCCGGCCAGACTCTCGCAGTGCCCTCCCTGCCA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCATGGATGCTGTAAGTaGAGTCCAGGAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEHGCCK*SPGAPG
Trigger: CCCTGGGGCTCCTGGACTGCACTTACAGCATCCATG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCATGGATGCTGTAAGTaGAGTCCAGGAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRHGCCK*SPGAPG
Trigger: CCCTGGGGCTCCTGGACTGCACTTACAGCATCCATG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTTCTCTTCCTGGACGTaGACGCCCCACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRFSSWT*TPHTQS
Trigger: AGACTGCGTGTGGGGCGTGCACGTCCAGGAAGAGAA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTTCTCTTCCTGGACGTaGACGCCCCACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQFSSWT*TPHTQS
Trigger: AGACTGCGTGTGGGGCGTGCACGTCCAGGAAGAGAA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTGGGGGCCCGGGCGGTaGCTGAAACTGCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGWGPGR*LKLQCE
Trigger: CTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCA...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGCAGGTGAGCATGGCTaGCCCCTCGAGGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGAGEHG*PLEAVP
Trigger: GGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTCCCGTATTTCCCTCTaGCCGAATGAGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRSRISL*PNEEGR
Trigger: CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCTCTGCCCCTTGGGATaGAGGGGCAGAATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEELCPLG*RGRIGL
Trigger: TAGCCCAATTCTGCCCCTCCATCCCAAGGGGCAGAG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGCGGGTGCTGGGCCCTaGGAGTCCCCATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIAGAGP*ESPWRL
Trigger: GAGTCGCCATGGGGACTCCCAGGGCCCAGCACCCGC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGTCCCGATCAGATCCTaGCAGGTAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQVPIRS*QVAHLW
Trigger: CCAGAGATGGGCTACCTGCCAGGATCTGATCGGGAC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000346932.9
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGTCCCGATCAGATCCTaGCAGGTAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRVPIRS*QVAHLW
Trigger: CCAGAGATGGGCTACCTGCCAGGATCTGATCGGGAC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000346932.9
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGAGGGGTGGCTAGCGTaGGGTCCCGATCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDEGWLA*GPDQIL
Trigger: CAGGATCTGATCGGGACCCCACGCTAGCCACCCCTC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000346932.9
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCTGTCCCCGGCTCAGTaGCCCGTGGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFILSPAQ*PVAGRA
Trigger: TGCCCTCCCTGCCACGGGCCACTGAGCCGGGGACAG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACTGTCCCCGGCTCAGTaGCCCGTGGCAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPLSPAQ*PVAGRA
Trigger: TGCCCTCCCTGCCACGGGCCACTGAGCCGGGGACAG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGAAGCAGCCGGTTGGTTaGGCTCCGAAGGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEKQPVG*APKDLS
Trigger: GGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGAAGCAGCCGGTTGGTTaGGCTCCGAAGGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRKQPVG*APKDLS
Trigger: GGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTT...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGAGGATGCCATGCAGCTaGGGGTTTCACCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQRMPCS*GFHRSR
Trigger: CCTGGAACGGTGAAACCCCCAGCTGCATGGCATCCT...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCGATGCGGCCCAGGGTaGCATTGTGGATGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDRCGPG*HCGWCH
Trigger: GTGGCACCATCCACAATGCCACCCTGGGCCGCATCG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGAGGACCACGCCAGCTaGTTCCGACAGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGEDHAS*FRQLPS
Trigger: GGAGGGGAGCTGTCGGAACCAGCTGGCGTGGTCCTC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCCAAGACTCGGGCGCTaGGACCGTCCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGPRLGR*DRPRRT
Trigger: TGTTCGACGGGGACGGTCCCAGCGCCCGAGTCTTGG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTGCAATACGAAGCCCTaGCCCAGGCCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRCNTKP*PRPGFG
Trigger: CCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTGCAATACGAAGCCCTaGCCCAGGCCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQCNTKP*PRPGFG
Trigger: CCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGTGCAATACGAAGCCCTaGCCCAGGCCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEECNTKP*PRPGFG
Trigger: CCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCA...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGCCCCACTCCGGAGGTaGCAGCTCGGGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIAPLRR*QLGARV
Trigger: GACACGTGCCCCGAGCTGCCACCTCCGGAGTGGGGC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCGGTGCGGTGCCCGTTaGCAATCTCGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGRCGAR*QSRQGQ
Trigger: CTGACCCTGGCGAGATTGCCAACGGGCACCGCACCG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCAGCGGTACTGGACGTaGGAGCCAACGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGQRYWT*EPTGKP
Trigger: CGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCTCGAGGCTGTACCCTaGCAGGCAGCGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDLEAVP*QAAVLD
Trigger: GTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGCTGGCTGGTCCACTaGGAGGGGTGGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPGWLVH*EGWPGT
Trigger: TGTGCCCGGCCACCCCTCCCAGTGGACCAGCCAGCC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGCTGGCTGGTCCACTaGGAGGGGTGGCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGWLVH*EGWPGT
Trigger: TGTGCCCGGCCACCCCTCCCAGTGGACCAGCCAGCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGAGAAGAGGCGGCTTTaGGCGGCAGGATGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEEKRRL*AAGCWF
Trigger: AAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGCCCGGGCGGTGCCTaGAACTGCAGTGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGPGGA*NCSVRS
Trigger: CGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCCCGGCTGTAGCAGGTaGGCATGGCTGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIPGCSR*AWLPPR
Trigger: TCGAGGGGGCAGCCATGCTCACCTGCTACAGCCGGG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCCCTTCCAGCTGCCGTaGTGGATCTGTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDPFQLP*WICGLG
Trigger: ACCCAGACCACAGATCCATCACGGCAGCTGGAAGGG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGGTGCCACCACAGGATaGCATGCAGCTGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDGATTG*HAAGGF
Trigger: GAAACCCCCAGCTGCATGGCATCCTGTGGTGGCACC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTGGCATTGTGGATGGTaGCACCACAGGATGCCATGC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQWHCGW*HHRMPC
Trigger: GCATGGCATCCTGTGGTGGCACCATCCACAATGCCA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCCGGCGCCCCTCAGCTaGTTCAATGACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGPAPLS*FNDPTA
Trigger: TGCCGTTGGGTCATTGAAGCAGCTGAGGGGCGCCGG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGGACCTCTTTGAAGTaGAATACGAAGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGTSLK*NTKPWP
Trigger: GGGCCAGGGCTTCGTATTGCACTTCAAAGAGGTCCC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCGGCGTCCGAGGCGGTaGGGTGCCCGTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIRRPRR*GARWQS
Trigger: AGATTGCCAACGGGCACCGCACCGCCTCGGACGCCG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACGGCGTCCGAGGCGGTaGGGTGCCCGTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPRRPRR*GARWQS
Trigger: AGATTGCCAACGGGCACCGCACCGCCTCGGACGCCG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGAGAAAGACAGCTTCTaGGGGTTTAGGGTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEEKDSF*GFRVGS
Trigger: CGACCCCACCCTAAACCCCCAGAAGCTGTCTTTCTC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGCGCCTGGGTCCACTaGGCTGTCTGGACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGAWVH*AVWTPS
Trigger: GCTTGGGGTCCAGACAGCCCAGTGGACCCAGGCGCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACATGGAGGGGCAGAATTaGGCTAGGGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDMEGQN*ARGRLE
Trigger: CTCCAGGCGACCCCTAGCCCAATTCTGCCCCTCCAT...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCCCTGGGAGTCCCCATaGCGACTCACCCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGPWESP*RLTPIS
Trigger: AGAGATCGGGGTGAGTCGCCATGGGGACTCCCAGGG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGAATCACAGTGAAAGGTaGCAGTGCCCCCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEENHSER*QCPQGA
Trigger: TGCACCCTGGGGGCACTGCCACCTTTCACTGTGATT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATCTGTGTCGTTCCAGTaGGGTTCTGTGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPESVSFQ*GSVGST
Trigger: TGTGGATCCCACAGAACCCCACTGGAACGACACAGA...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACATGCGCTTCTCTTCCTaGACGTGCACGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDMRFSS*TCTPHT
Trigger: CGTGTGGGGCGTGCACGTCCAGGAAGAGAAGCGCAT...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGCCCAGGCCTGGATTTaGGGGCCCGGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGAQAWI*GPGRCL
Trigger: CAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGCAGGCAGCGGTACTaGACGTGGGAGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGRQRY*TWEPTG
Trigger: CCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAACTTCAAGGCGCATTTaGGGACCCTATCGCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPETSRRI*GPYRST
Trigger: AGTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGGCAGGCCCCTCGTTTaGCAACTGAGAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGGRPLV*QLRRGG
Trigger: GCCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCTCAGCAGGGCCCCATaGAGCAGTTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFILSRAP*SSSARA
Trigger: GGCCCTGGCTGAACTGCTTCATGGGGCCCTGCTGAG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR TCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTCCTCGGGACCTCTTTaGAGTGCAATACGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQSSGPL*SAIRSP
Trigger: AGGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCACTGCCGAGGACAATaGCCAAGCCTAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDHCRGQ*PSLEAA
Trigger: TGCTGCCTCTAGGCTTGGTCATTGTCCTCGGCAGTG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCACCACAGGATGCCATaGAGCTGGGGGTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDHHRMP*SWGFHR
Trigger: ACGGTGAAACCCCCAGCTGCATGGCATCCTGTGGTG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCTTTCAAAGTGCAGGTaGAGCCGGCGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGLSKCR*SRRPSA
Trigger: AGCTGAGGGGCGCCGGCTGCACCTGCACTTTGAAAG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGAGTGACATTTCCATGTaGCAGGAAGGGGGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQSDISM*QEGGEA
Trigger: TGCTTCGCCCCCTTCCTGGCACATGGAAATGTCACT...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGAGGCACGAGAAGGTTaGCAGTGCCCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGEAREG*QCPWAI
Trigger: TATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTTCTCTTCCTGGACGTaGACGCCCCACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDFSSWT*TPHTQS
Trigger: AGACTGCGTGTGGGGCGTGCACGTCCAGGAAGAGAA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTGGGGGCCCGGGCGGTaGCTGAAACTGCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIWGPGR*LKLQCE
Trigger: CTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTCCGAGGCGGTGCGGTaGCCGTTGGCAATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFISEAVR*PLAISP
Trigger: TGGCGAGATTGCCAACGGGCACCGCACCGCCTCGGA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGCAGGTGAGCATGGCTaGCCCCTCGAGGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIAGEHG*PLEAVP
Trigger: GGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCCTCATAGGCAACTTTaGAGAGTGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDPHRQL*RVGAGW
Trigger: CCAGCCAGCCCCCACTCTGCAAAGTTGCCTATGAGG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCATCCTGCTCAGGCGCCTaGGTCCACTGGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPSCSGA*VHWAVW
Trigger: CCAGACAGCCCAGTGGACCCAGGCGCCTGAGCAGGA...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGGCACTGCGAGAGTCTaGCCGGCCGGAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCGTARV*PAGGVA
Trigger: AGCCACCCCTCCGGCCGGCCAGACTCTCGCAGTGCC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACGGCTCAGTGGCCCGTaGCAGGGAGGGCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGRLSGP*QGGHCE
Trigger: CTCGCAGTGCCCTCCCTGCCACGGGCCACTGAGCCG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGACCCGTGGGCTCTaGAAGTGCAGAAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPGTRGL*KCRSSR
Trigger: CCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGGGTGGCATTGTGGATaGTGCCACCACAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDGWHCG*CHHRMP
Trigger: TGGCATCCTGTGGTGGCACCATCCACAATGCCACCC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCTCCAGGGCATATCCTaGGAGGCACGAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDLQGIS*EAREGC
Trigger: GCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTCCAGTGGGGTTCTGTaGGATCCACACATTCGATGG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQSSGVL*DPHIRW
Trigger: CCATCGAATGTGTGGATCCCACAGAACCCCACTGGA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTCTGTGTCGTTCCAGTaGGGTTCTGTGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRSVSFQ*GSVGST
Trigger: TGTGGATCCCACAGAACCCCACTGGAACGACACAGA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGAGGACCACGCCAGCTaGTTCCGACAGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPEDHAS*FRQLPS
Trigger: GGAGGGGAGCTGTCGGAACCAGCTGGCGTGGTCCTC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGATGCGCTTCTCTTCCTaGACGTGCACGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGMRFSS*TCTPHT
Trigger: CGTGTGGGGCGTGCACGTCCAGGAAGAGAAGCGCAT...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACCAAGACTCGGGCGCTaGGACCGTCCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPPRLGR*DRPRRT
Trigger: TGTTCGACGGGGACGGTCCCAGCGCCCGAGTCTTGG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGCCCCACTCCGGAGGTaGCAGCTCGGGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCAPLRR*QLGARV
Trigger: GACACGTGCCCCGAGCTGCCACCTCCGGAGTGGGGC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCGGATCAGGTCCCCGTaGGATGCCGTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIRIRSP*DAVLQP
Trigger: GGGCTGGAGAACGGCATCCCACGGGGACCTGATCCG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACGGTGCGGTGCCCGTTaGCAATCTCGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPRCGAR*QSRQGQ
Trigger: CTGACCCTGGCGAGATTGCCAACGGGCACCGCACCG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGACTTCAAGGCGCATTTaGGGACCCTATCGCTCCACT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRTSRRI*GPYRST
Trigger: AGTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGT...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCCCAAGGGGAGGCCCTaGCAGGTAGCCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIPKGRP*QVAHLW
Trigger: CCAGAGATGGGCTACCTGCCAGGGCCTCCCCTTGGG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350527.7
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGATGGATCTGTGGTCTaGGTCACTTCCAGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEDGSVV*VTSSFR
Trigger: CCGAAAACTGGAAGTGACCCAGACCACAGATCCATC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGGTCCCACTGGCAAGTaGGAATGTCGGAGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGGPTGK*ECRSLA
Trigger: TGCTAGGCTCCGACATTCTCACTTGCCAGTGGGACC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCCCGGCTGTAGCAGGTaGGCATGGCTGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCPGCSR*AWLPPR
Trigger: TCGAGGGGGCAGCCATGCTCACCTGCTACAGCCGGG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTAGTCCGACTCCACGGTaGTGGGGCTGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFISPTPR*WGCRSG
Trigger: CCCACTCCTACAGCCCCATCACCGTGGAGTCGGACT...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTGGCATTGTGGATGGTaGCACCACAGGATGCCATGC +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDWHCGW*HHRMPC
Trigger: GCATGGCATCCTGTGGTGGCACCATCCACAATGCCA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGAGACCCTTTCAAAGTaGAGGTGCAGCCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPETLSK*RCSRRP
Trigger: GGGGCGCCGGCTGCACCTGCACTTTGAAAGGGTCTC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCAACTTGGAGCAAGATaGGCTTCTCTTCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQQLGAR*ASLPGR
Trigger: ACGTCCAGGAAGAGAAGCGCATCTTGCTCCAAGTTG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACGCTCCACTTGGGTGTaGCTGTGTCCCGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPRSTWV*LCPGCS
Trigger: GCTACAGCCGGGACACAGGCACACCCAAGTGGAGCG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCATCTGGGGGTTTAGGGTaGGGTCGAGGATCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPSGGLG*GRGSRG
Trigger: CCCCCTCGATCCTCGACCCCACCCTAAACCCCCAGA...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACCCTGGGAGTCCCCATaGCGACTCACCCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPPWESP*RLTPIS
Trigger: AGAGATCGGGGTGAGTCGCCATGGGGACTCCCAGGG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCTCACTTCCAGGCTCTaGCAATATCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRLTSRL*QYLLLL
Trigger: AAGGAGGAGGAGATATTGCCAGAGCCTGGAAGTGAG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGAGGGGTGGCTAGCGTaGGGTCCCGATCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPEGWLA*GPDQIL
Trigger: CAGGATCTGATCGGGACCCCACGCTAGCCACCCCTC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000346932.9
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGCCCCTTGGGACCCGTaGGCTCTGGAAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPAPWDP*ALEVQK
Trigger: CTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAACACTCACGTCCCCATaGGCCGGCCGGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGTLTSP*AGRGGK
Trigger: CTTCCCTCCCCGGCCGGCCCATGGGGACGTGAGTGT...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACGATGCGGCCCAGGGTaGCATTGTGGATGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPRCGPG*HCGWCH
Trigger: GTGGCACCATCCACAATGCCACCCTGGGCCGCATCG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRLTAGD*QVSLTA
Trigger: TGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGTTGCCAGTGCCCCTaGGCGATACTCAGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPGCQCP*AILRVR
Trigger: ACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCTCCAGGGCATATCCTaGGAGGCACGAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGLQGIS*EAREGC
Trigger: GCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTGCAATACGAAGCCCTaGCCCAGGCCTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGCNTKP*PRPGFG
Trigger: CCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCA...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGGCAGGCAGCGGTACTaGACGTGGGAGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCGRQRY*TWEPTG
Trigger: CCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACTCGAGGCTGTACCCTaGCAGGCAGCGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPLEAVP*QAAVLD
Trigger: GTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGTCTTGGGGTTCAGATaGAAACTTCATACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQVLGFR*KLHTPA
Trigger: CGCGGGAGTATGAAGTTTCCATCTGAACCCCAAGAC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAATCAAAGCCCCCTCGTaGGATAGGGAGACTATTTAC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEIKAPS*DRETIY
Trigger: GTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGAT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGAGAAGAGGCGGCTTTaGGCGGCAGGATGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGEKRRL*AAGCWF
Trigger: AAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGATGGATCTGTGGTCTaGGTCACTTCCAGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEDGSVV*VTSSFR
Trigger: CCGAAAACTGGAAGTGACCCAGACCACAGATCCATC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGATTGGCAGGTGTCTCTaGCAGCAGCTCCACGTAGAG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGIGRCL*QQLHVE
Trigger: CTCTACGTGGAGCTGCTGTCAGAGACACCTGCCAAT...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTCCTCGGGACCTCTTTaGAGTGCAATACGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDSSGPL*SAIRSP
Trigger: AGGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGCTCGCACTGGTAGGTaGGCACCGTGCCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCARTGR*APCPGS
Trigger: TGATCCGGGGCACGGTGCTCACCTACCAGTGCGAGC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGCAGTGCCCCCAGGGTaGAGGTCCGTCACACTCACG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGAVPPG*RSVTLT
Trigger: CGTGAGTGTGACGGACCTGCACCCTGGGGGCACTGC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACTTTCAAAGTGCAGGTaGAGCCGGCGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPLSKCR*SRRPSA
Trigger: AGCTGAGGGGCGCCGGCTGCACCTGCACTTTGAAAG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGGGACCTCTTTGAAGTaGAATACGAAGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGGTSLK*NTKPWP
Trigger: GGGCCAGGGCTTCGTATTGCACTTCAAAGAGGTCCC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCAGGTCCCCGTGGGATaGCGTTCTCCAGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCQVPVG*RSPAPL
Trigger: GAGTGGGGCTGGAGAACGGCATCCCACGGGGACCTG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGATCCGAGGCGGTGCGGTaGCCGTTGGCAATCTCGCCA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGSEAVR*PLAISP
Trigger: TGGCGAGATTGCCAACGGGCACCGCACCGCCTCGGA...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCTTTGGGCGGCAGGATaGTGGTTTATTTACTGTAGG +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRLWAAG*WFIYCR
Trigger: CCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCTTTGGGCGGCAGGATaGTGGTTTATTTACTGTAGG +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEELWAAG*WFIYCR
Trigger: CCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCCGAAGCTCGGGCACTaGAGCTGCGGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCPKLGH*SCGREK
Trigger: CTTCTCCCTCCCGCAGCTCCAGTGCCCGAGCTTCGG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTATGGAGGGGCAGAATTaGGCTAGGGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIMEGQN*ARGRLE
Trigger: CTCCAGGCGACCCCTAGCCCAATTCTGCCCCTCCAT...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTTCAGGGGCAGACCCTaGATCCAGGGACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIFRGRP*IQGQLS
Trigger: GCTGAGCTGTCCCTGGATCCAGGGTCTGCCCCTGAA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCAGGTAGCCCATCTCTaGGCCCCTCCTCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCQVAHL*APPQQG
Trigger: GCCCTGCTGAGGAGGGGCCCAGAGATGGGCTACCTG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGTTATTACACAGAACTaGGCTGGTCACCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: QEAETGSRISLCPNEEGRVITQN*AGHRSG
Trigger: ACCACTACGGTGACCAGCCCAGTTCTGTGTAATAAC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGAAGCCACCGCCCCTTaGGACCCGTGGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCEATAP*DPWALE
Trigger: TTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGAGGACCACGCCAGCTaGTTCCGACAGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCEDHAS*FRQLPS
Trigger: GGAGGGGAGCTGTCGGAACCAGCTGGCGTGGTCCTC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAATGCGCTTCTCTTCCTaGACGTGCACGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPMRFSS*TCTPHT
Trigger: CGTGTGGGGCGTGCACGTCCAGGAAGAGAAGCGCAT...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCCCAGGCCTGGATTTaGGGGCCCGGGCGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAQAWI*GPGRCL
Trigger: CAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACGGATCAGGTCCCCGTaGGATGCCGTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGRIRSP*DAVLQP
Trigger: GGGCTGGAGAACGGCATCCCACGGGGACCTGATCCG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCGGATCAGGTCCCCGTaGGATGCCGTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCRIRSP*DAVLQP
Trigger: GGGCTGGAGAACGGCATCCCACGGGGACCTGATCCG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCAAGACAGGTCCCACTaGCAAGTGAGAATGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDQDRSH*QVRMSE
Trigger: CTCCGACATTCTCACTTGCCAGTGGGACCTGTCTTG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACAGCGGTACTGGACGTaGGAGCCAACGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGQRYWT*EPTGKP
Trigger: CGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGTCCACTGGGAGGGGTaGCCGGGCACACAGGTGATG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGVHWEG*PGTQVM
Trigger: CATCACCTGTGTGCCCGGCCACCCCTCCCAGTGGAC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGCCGTGATGGATCTGTaGTCTGGGTCACTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDAVMDL*SGSLCR
Trigger: TCTGCAAAGTGACCCAGACCACAGATCCATCACGGC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGATCAAAGCCCCCTCGTaGGATAGGGAGACTATTTAC +
Preference number: 4 (lower is better)
Translates to: GSQEAETGSRISLCPNEEIKAPS*DRETIY
Trigger: GTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGAT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGAGCTCCTCTTCCTGTaGCAGGTTCAGCGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPELLFL*QVQRLH
Trigger: GTGCAGACGCTGAACCTGTCACAGGAAGAGGAGCTC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCACTGCCGAGGACAATaGCCAAGCCTAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIHCRGQ*PSLEAA
Trigger: TGCTGCCTCTAGGCTTGGTCATTGTCCTCGGCAGTG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATGGCAGGGAGGGCACTaGGAGAGTCTGGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRWQGGH*ESLAGR
Trigger: CCGGCCGGCCAGACTCTCGCAGTGCCCTCCCTGCCA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAAGTGAAAGGTGGCAGTaGCCCCAGGGTGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGSERWQ*PQGAGP
Trigger: CGGACCTGCACCCTGGGGGCACTGCCACCTTTCACT...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCCGGCGCCCCTCAGCTaGTTCAATGACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCPAPLS*FNDPTA
Trigger: TGCCGTTGGGTCATTGAAGCAGCTGAGGGGCGCCGG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGAGACCCTTTCAAAGTaGAGGTGCAGCCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCETLSK*RCSRRP
Trigger: GGGGCGCCGGCTGCACCTGCACTTTGAAAGGGTCTC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCAACTTGGAGCAAGATaGGCTTCTCTTCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDQLGAR*ASLPGR
Trigger: ACGTCCAGGAAGAGAAGCGCATCTTGCTCCAAGTTG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACGCTCCACTTGGGTGTaGCTGTGTCCCGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGRSTWV*LCPGCS
Trigger: GCTACAGCCGGGACACAGGCACACCCAAGTGGAGCG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACCTCATAGGCAACTTTaGAGAGTGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPPHRQL*RVGAGW
Trigger: CCAGCCAGCCCCCACTCTGCAAAGTTGCCTATGAGG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACTCTGCCCCTTGGGATaGAGGGGCAGAATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPLCPLG*RGRIGL
Trigger: TAGCCCAATTCTGCCCCTCCATCCCAAGGGGCAGAG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACAATTTCTCTGCCCCTTaGGATGGAGGGGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDNFSAP*DGGAEL
Trigger: CAATTCTGCCCCTCCATCCCAAGGGGCAGAGAAATT...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACCCTGGGAGTCCCCATaGCGACTCACCCCGATCTCT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGPWESP*RLTPIS
Trigger: AGAGATCGGGGTGAGTCGCCATGGGGACTCCCAGGG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCGGGTGCTGGGCCCTaGGAGTCCCCATGGCGACTC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAGAGP*ESPWRL
Trigger: GAGTCGCCATGGGGACTCCCAGGGCCCAGCACCCGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTATTAGGAACAGCAGCTaGGGAGGCGGCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCIRNSS*GGGGCW
Trigger: CCAGCACCCGCCGCCTCCCCAGCTGCTGTTCCTAAT...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACCTCACTTCCAGGCTCTaGCAATATCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDLTSRL*QYLLLL
Trigger: AAGGAGGAGGAGATATTGCCAGAGCCTGGAAGTGAG...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACCTCAGAGGCCACCGTaGGGGTCTCACTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGPQRPP*GSHFQA
Trigger: AGCCTGGAAGTGAGACCCCCACGGTGGCCTCTGAGG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACGGGGTCAGCAGTTCTaGCGCAGTGGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRRGQQF*RSGACP
Trigger: GGGGCAGGCCCCACTGCGCCAGAACTGCTGACCCCG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGCAGAAGCAGCCGGTTaGTTGGGCTCCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIAEAAG*LGSEGL
Trigger: AAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTTCACCGTTCCAGGATaGCCGGGTGCCATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIFTVPG*PGAIEA
Trigger: TGCCTCAATGGCACCCGGCCATCCTGGAACGGTGAA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAAGGATGCCATGCAGCTaGGGGTTTCACCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPRMPCS*GFHRSR
Trigger: CCTGGAACGGTGAAACCCCCAGCTGCATGGCATCCT...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGGTGGCATTGTGGATaGTGCCACCACAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGWHCG*CHHRMP
Trigger: TGGCATCCTGTGGTGGCACCATCCACAATGCCACCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTGGCATTGTGGATaGTGCCACCACAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPGWHCG*CHHRMP
Trigger: TGGCATCCTGTGGTGGCACCATCCACAATGCCACCC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCGATGCGGCCCAGGGTaGCATTGTGGATGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCRCGPG*HCGWCH
Trigger: GTGGCACCATCCACAATGCCACCCTGGGCCGCATCG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGGTTGCCAGTGCCCCTaGGCGATACTCAGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGGCQCP*AILRVR
Trigger: ACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCACATTCGATGGCATTaGGGGGCCCAGGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCHIRWH*GAQGAP
Trigger: TGGAGCCCCCTGGGCCCCCCAATGCCATCGAATGTG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACTCGAGGCTGTACCCTaGCAGGCAGCGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGLEAVP*QAAVLD
Trigger: GTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCCCTATCGCTCCACTTaGGTGTGCCTGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCPYRST*VCLCPG
Trigger: GCCGGGACACAGGCACACCCAAGTGGAGCGATAGGG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGACTTCAAGGCGCATTTaGGGACCCTATCGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGTSRRI*GPYRST
Trigger: AGTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGT...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAACTTTCCCTGAAGCTTaGTGTAGTAGATGTAAACGC +
Preference number: 4 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPETFPEA*CSRCKR
Trigger: GCGTTTACATCTACTACACCAAGCTTCAGGGAAAGT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGTCTTGGGGTTCAGATaGAAACTTCATACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDVLGFR*KLHTPA
Trigger: CGCGGGAGTATGAAGTTTCCATCTGAACCCCAAGAC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTCCCGATCAGATCCCTaGATCCAGGGACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFISRSDP*IQGQLS
Trigger: GCTGAGCTGTCCCTGGATCCAGGGATCTGATCGGGA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537485.5
CDS-3UTR TCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACCCGGCTGTAGCAGGTaGGCATGGCTGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRPGCSR*AWLPPR
Trigger: TCGAGGGGGCAGCCATGCTCACCTGCTACAGCCGGG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACCCTTCCAGCTGCCGTaGTGGATCTGTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGPFQLP*WICGLG
Trigger: ACCCAGACCACAGATCCATCACGGCAGCTGGAAGGG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACCCTCGTTTGGCAACTaGGAAGAGGCGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGPSFGN*EEAALG
Trigger: GCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGGG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCCCTCGTTTGGCAACTaGGAAGAGGCGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCPSFGN*EEAALG
Trigger: GCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGGG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTGGCATTGTGGATGGTaGCACCACAGGATGCCATGC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIWHCGW*HHRMPC
Trigger: GCATGGCATCCTGTGGTGGCACCATCCACAATGCCA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGAGGCACGAGAAGGTTaGCAGTGCCCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCEAREG*QCPWAI
Trigger: TATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGAGGCACGAGAAGGTTaGCAGTGCCCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGEAREG*QCPWAI
Trigger: TATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGGGCGTCCTGGGTCCTaGAGCTGTAGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGGRPGS*SCSLGV
Trigger: AACCCCAAGACTACAGCTGCAGGACCCAGGACGCCC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACCCAAGCTAGGGGACTaGGGAGGAGAAAGACAGCTT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPPKLGD*GGERQL
Trigger: AAGCTGTCTTTCTCCTCCCCAGTCCCCTAGCTTGGG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTTTCAGGGGCAGACCCTaGATCCAGGGACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCFRGRP*IQGQLS
Trigger: GCTGAGCTGTCCCTGGATCCAGGGTCTGCCCCTGAA...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAACACTCACGTCCCCATaGGCCGGCCGGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRTLTSP*AGRGGK
Trigger: CTTCCCTCCCCGGCCGGCCCATGGGGACGTGAGTGT...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAAATCACAGTGAAAGGTaGCAGTGCCCCCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPNHSER*QCPQGA
Trigger: TGCACCCTGGGGGCACTGCCACCTTTCACTGTGATT...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGLTAGD*QVSLTA
Trigger: TGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAA...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAAGAGTGGGGGCTGGCTaGTCCACTGGGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRRVGAG*STGRGG
Trigger: GCCACCCCTCCCAGTGGACCAGCCAGCCCCCACTCT...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACACTGCCGAGGACAATaGCCAAGCCTAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGHCRGQ*PSLEAA
Trigger: TGCTGCCTCTAGGCTTGGTCATTGTCCTCGGCAGTG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGCACCTGGATCTCAATaGCGTAGCCAGGGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPAPGSQ*RSQGRH
Trigger: ATGTCTACCCTGGCTACGGCATTGAGATCCAGGTGC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACACCACAGGATGCCATaGAGCTGGGGGTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGHHRMP*SWGFHR
Trigger: ACGGTGAAACCCCCAGCTGCATGGCATCCTGTGGTG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCACCACAGGATGCCATaGAGCTGGGGGTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCHHRMP*SWGFHR
Trigger: ACGGTGAAACCCCCAGCTGCATGGCATCCTGTGGTG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCTCCACACATGGCTTTaGAGGCCGGCTCTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCLHTWL*RPALCR
Trigger: ACGACACAGAGCCGGCCTGCAAAGCCATGTGTGGAG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTTTCTCTTCCTGGACGTaGACGCCCCACACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCFSSWT*TPHTQS
Trigger: AGACTGCGTGTGGGGCGTGCACGTCCAGGAAGAGAA...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACAGGTCCCCGTGGGATaGCGTTCTCCAGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRQVPVG*RSPAPL
Trigger: GAGTGGGGCTGGAGAACGGCATCCCACGGGGACCTG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCAGGTGAGCATGGCTaGCCCCTCGAGGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAGEHG*PLEAVP
Trigger: GGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCTTTGGGCGGCAGGATaGTGGTTTATTTACTGTAGG +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGLWAAG*WFIYCR
Trigger: CCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACCTCATAGGCAACTTTaGAGAGTGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGPHRQL*RVGAGW
Trigger: CCAGCCAGCCCCCACTCTGCAAAGTTGCCTATGAGG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACGAGGGGGTCTCCACTaGGCTCTAGCGGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRRGGLH*ALAGLV
Trigger: GACAAGCCCCGCTAGAGCCCAGTGGAGACCCCCTCG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGGGGCTCCCCAGATCTaGAGACTCCACATACCCTTC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCGAPQI*RLHIPF
Trigger: GAAGGGTATGTGGAGTCTCCAGATCTGGGGAGCCCC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGGGGCTCCCCAGATCTaGAGACTCCACATACCCTTC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGGAPQI*RLHIPF
Trigger: GAAGGGTATGTGGAGTCTCCAGATCTGGGGAGCCCC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGCAGAAGCAGCCGGTTaGTTGGGCTCCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCAEAAG*LGSEGL
Trigger: AAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGATTCACCGTTCCAGGATaGCCGGGTGCCATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGFTVPG*PGAIEA
Trigger: TGCCTCAATGGCACCCGGCCATCCTGGAACGGTGAA...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGGGTGGCATTGTGGATaGTGCCACCACAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGGWHCG*CHHRMP
Trigger: TGGCATCCTGTGGTGGCACCATCCACAATGCCACCC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACCAAGACTCGGGCGCTaGGACCGTCCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRPRLGR*DRPRRT
Trigger: TGTTCGACGGGGACGGTCCCAGCGCCCGAGTCTTGG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACAGCGGTACTGGACGTaGGAGCCAACGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRQRYWT*EPTGKP
Trigger: CGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGATGGATCTGTGGTCTaGGTCACTTTGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIDGSVV*VTLQSG
Trigger: CCCACTCTGCAAAGTGACCCAGACCACAGATCCATC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTGGGCGGCAGGATGCTaGTTTATTTACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGWAAGC*FIYCRI
Trigger: GATCCTACAGTAAATAAACCAGCATCCTGCCGCCCA...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTTGGCATTGTGGATGGTaGCACCACAGGATGCCATGC +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCWHCGW*HHRMPC
Trigger: GCATGGCATCCTGTGGTGGCACCATCCACAATGCCA...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGAGACCCTTTCAAAGTaGAGGTGCAGCCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRETLSK*RCSRRP
Trigger: GGGGCGCCGGCTGCACCTGCACTTTGAAAGGGTCTC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCAACTTGGAGCAAGATaGGCTTCTCTTCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIQLGAR*ASLPGR
Trigger: ACGTCCAGGAAGAGAAGCGCATCTTGCTCCAAGTTG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGCACTGCGAGAGTCTaGCCGGCCGGAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWGTARV*PAGGVA
Trigger: AGCCACCCCTCCGGCCGGCCAGACTCTCGCAGTGCC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCGGGGTCAGCAGTTCTaGCGCAGTGGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWRGQQF*RSGACP
Trigger: GGGGCAGGCCCCACTGCGCCAGAACTGCTGACCCCG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCCCCTTGGGACCCGTaGGCTCTGGAAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAPWDP*ALEVQK
Trigger: CTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAATCACAGTGAAAGGTaGCAGTGCCCCCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCNHSER*QCPQGA
Trigger: TGCACCCTGGGGGCACTGCCACCTTTCACTGTGATT...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACAAGTCATGATCTTTTaGCAGGCGGGCGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRQVMIF*QAGGAA
Trigger: CGCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACCCTATCGCTCCACTTaGGTGTGCCTGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRPYRST*VCLCPG
Trigger: GCCGGGACACAGGCACACCCAAGTGGAGCGATAGGG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGTCTTGGGGTTCAGATaGAAACTTCATACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPVLGFR*KLHTPA
Trigger: CGCGGGAGTATGAAGTTTCCATCTGAACCCCAAGAC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGGCAGGCCCCTCGTTTaGCAACTGAGAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRGRPLV*QLRRGG
Trigger: GCCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGATGGATCTGTGGTCTaGGTCACTTCCAGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPDGSVV*VTSSFR
Trigger: CCGAAAACTGGAAGTGACCCAGACCACAGATCCATC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTTCCTCGGGACCTCTTTaGAGTGCAATACGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCSSGPL*SAIRSP
Trigger: AGGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGA...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCCCGGCTGTAGCAGGTaGGCATGGCTGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWPGCSR*AWLPPR
Trigger: TCGAGGGGGCAGCCATGCTCACCTGCTACAGCCGGG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGAAAGACAATTTCTCTaGCCCTTGGGATGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGERQFL*PLGWRG
Trigger: GCCCCTCCATCCCAAGGGGCAGAGAAATTGTCTTTC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR GCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGCACCTGGATCTCAATaGCGTAGCCAGGGTAGACAT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGAPGSQ*RSQGRH
Trigger: ATGTCTACCCTGGCTACGGCATTGAGATCCAGGTGC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGGTGCCACCACAGGATaGCATGCAGCTGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRGATTG*HAAGGF
Trigger: GAAACCCCCAGCTGCATGGCATCCTGTGGTGGCACC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACTTTCAAAGTGCAGGTaGAGCCGGCGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRLSKCR*SRRPSA
Trigger: AGCTGAGGGGCGCCGGCTGCACCTGCACTTTGAAAG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGGGCGTCCTGGGTCCTaGAGCTGTAGTCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRGRPGS*SCSLGV
Trigger: AACCCCAAGACTACAGCTGCAGGACCCAGGACGCCC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGAGGGGCCGGGTGGCCTaGGTTACCCTCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWRGRVA*VTLLLR
Trigger: CCTGAGCAGGAGGGTAACCCAGGCCACCCGGCCCCT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGTCCTTCTCCAAGCATaGATGAGTTGGCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGVLLQA*MSWPGV
Trigger: GACTCCTGGCCAACTCATCCATGCTTGGAGAAGGAC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTTCCAGTGGGGTTCTGTaGGATCCACACATTCGATGG +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCSSGVL*DPHIRW
Trigger: CCATCGAATGTGTGGATCCCACAGAACCCCACTGGA...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGATCTGTGTCGTTCCAGTaGGGTTCTGTGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGSVSFQ*GSVGST
Trigger: TGTGGATCCCACAGAACCCCACTGGAACGACACAGA...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACAAGACAGGTCCCACTaGCAAGTGAGAATGTCGGAG +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGQDRSH*QVRMSE
Trigger: CTCCGACATTCTCACTTGCCAGTGGGACCTGTCTTG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCAAGACAGGTCCCACTaGCAAGTGAGAATGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCQDRSH*QVRMSE
Trigger: CTCCGACATTCTCACTTGCCAGTGGGACCTGTCTTG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGAGAGTGGGGGCTGGCTaGTCCACTGGGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWRVGAG*STGRGG
Trigger: GCCACCCCTCCCAGTGGACCAGCCAGCCCCCACTCT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGACTTTCCCTGAAGCTTaGTGTAGTAGATGTAAACGC +
Preference number: 4 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGTFPEA*CSRCKR
Trigger: GCGTTTACATCTACTACACCAAGCTTCAGGGAAAGT...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCATGGGCGGCAGGATGCTaGTTTATTTACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPWAAGC*FIYCRI
Trigger: GATCCTACAGTAAATAAACCAGCATCCTGCCGCCCA...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTGGGCGGCAGGATGCTaGTTTATTTACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIWAAGC*FIYCRI
Trigger: GATCCTACAGTAAATAAACCAGCATCCTGCCGCCCA...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGCCGTGATGGATCTGTaGTCTGGGTCACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCAVMDL*SGSLPV
Trigger: AACTGGAAGTGACCCAGACCACAGATCCATCACGGC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGGTCCCACTGGCAAGTaGGAATGTCGGAGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRGPTGK*ECRSLA
Trigger: TGCTAGGCTCCGACATTCTCACTTGCCAGTGGGACC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCCTGGGTTACCCTCCTaGTCAGGCGCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWPGLPS*SGAWVH
Trigger: GTGGACCCAGGCGCCTGAGCAGGAGGGTAACCCAGG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGCAGTGCCCCCAGGGTaGAGGTCCGTCACACTCACG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWAVPPG*RSVTLT
Trigger: CGTGAGTGTGACGGACCTGCACCCTGGGGGCACTGC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACTCCACACATGGCTTTaGAGGCCGGCTCTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRLHTWL*RPALCR
Trigger: ACGACACAGAGCCGGCCTGCAAAGCCATGTGTGGAG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTGGGGGCCCGGGCGGTaGCTGAAACTGCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWWGPGR*LKLQCE
Trigger: CTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGACTCACTTCCAGGCTCTaGCAATATCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGLTSRL*QYLLLL
Trigger: AAGGAGGAGGAGATATTGCCAGAGCCTGGAAGTGAG...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCAGGTAGCCCATCTCTaGGCCCCTCCTCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWQVAHL*APPQQG
Trigger: GCCCTGCTGAGGAGGGGCCCAGAGATGGGCTACCTG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCAGAAGCAGCCGGTTaGTTGGGCTCCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAEAAG*LGSEGL
Trigger: AAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGGACCCGTGGGCTCTaGAAGTGCAGAAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWGTRGL*KCRSSR
Trigger: CCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATTCACCGTTCCAGGATaGCCGGGTGCCATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRFTVPG*PGAIEA
Trigger: TGCCTCAATGGCACCCGGCCATCCTGGAACGGTGAA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAAGGATGCCATGCAGCTaGGGGTTTCACCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRRMPCS*GFHRSR
Trigger: CCTGGAACGGTGAAACCCCCAGCTGCATGGCATCCT...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGATTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGLTAGD*QVSLTA
Trigger: TGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAA...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACTCCAGGGCATATCCTaGGAGGCACGAGAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRLQGIS*EAREGC
Trigger: GCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGAGTCCGACTCCACGGTaGTGGGGCTGTAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWSPTPR*WGCRSG
Trigger: CCCACTCCTACAGCCCCATCACCGTGGAGTCGGACT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGAGTGAAAGGTGGCAGTaGCCCCAGGGTGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWSERWQ*PQGAGP
Trigger: CGGACCTGCACCCTGGGGGCACTGCCACCTTTCACT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCCGGCGCCCCTCAGCTaGTTCAATGACCCAACGGCA +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWPAPLS*FNDPTA
Trigger: TGCCGTTGGGTCATTGAAGCAGCTGAGGGGCGCCGG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCGCTCCACTTGGGTGTaGCTGTGTCCCGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWRSTWV*LCPGCS
Trigger: GCTACAGCCGGGACACAGGCACACCCAAGTGGAGCG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCTTTGGGCGGCAGGATaGTGGTTTATTTACTGTAGG +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCLWAAG*WFIYCR
Trigger: CCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGATTAGGAACAGCAGCTaGGGAGGCGGCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWIRNSS*GGGGCW
Trigger: CCAGCACCCGCCGCCTCCCCAGCTGCTGTTCCTAAT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCCTCAGAGGCCACCGTaGGGGTCTCACTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWPQRPP*GSHFQA
Trigger: AGCCTGGAAGTGAGACCCCCACGGTGGCCTCTGAGG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTGTTATTACACAGAACTaGGCTGGTCACCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCVITQN*AGHRSG
Trigger: ACCACTACGGTGACCAGCCCAGTTCTGTGTAATAAC...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAAATCACAGTGAAAGGTaGCAGTGCCCCCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRNHSER*QCPQGA
Trigger: TGCACCCTGGGGGCACTGCCACCTTTCACTGTGATT...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCAAGTCATGATCTTTTaGCAGGCGGGCGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWQVMIF*QAGGAA
Trigger: CGCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCCCTATCGCTCCACTTaGGTGTGCCTGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWPYRST*VCLCPG
Trigger: GCCGGGACACAGGCACACCCAAGTGGAGCGATAGGG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTTCAGGGGCAGACCCTaGATCCAGGGACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWFRGRP*IQGQLS
Trigger: GCTGAGCTGTCCCTGGATCCAGGGTCTGCCCCTGAA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGTCCTTCTCCAAGCATaGATGAGTTGGCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRVLLQA*MSWPGV
Trigger: GACTCCTGGCCAACTCATCCATGCTTGGAGAAGGAC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATCCAGTGGGGTTCTGTaGGATCCACACATTCGATGG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRSSGVL*DPHIRW
Trigger: CCATCGAATGTGTGGATCCCACAGAACCCCACTGGA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCACCACAGGATGCCATaGAGCTGGGGGTTTCACCGT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWHHRMP*SWGFHR
Trigger: ACGGTGAAACCCCCAGCTGCATGGCATCCTGTGGTG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCTCCACACATGGCTTTaGAGGCCGGCTCTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWLHTWL*RPALCR
Trigger: ACGACACAGAGCCGGCCTGCAAAGCCATGTGTGGAG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACAACTTGGAGCAAGATaGGCTTCTCTTCCTGGACGT +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRQLGAR*ASLPGR
Trigger: ACGTCCAGGAAGAGAAGCGCATCTTGCTCCAAGTTG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAAATTTCTCTGCCCCTTaGGATGGAGGGGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRNFSAP*DGGAEL
Trigger: CAATTCTGCCCCTCCATCCCAAGGGGCAGAGAAATT...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGAAGCAGCCGGTTGGTTaGGCTCCGAAGGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWKQPVG*APKDLS
Trigger: GGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTTCACCGTTCCAGGATaGCCGGGTGCCATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWFTVPG*PGAIEA
Trigger: TGCCTCAATGGCACCCGGCCATCCTGGAACGGTGAA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAACTTTCCCTGAAGCTTaGTGTAGTAGATGTAAACGC +
Preference number: 4 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGTFPEA*CSRCKR
Trigger: GCGTTTACATCTACTACACCAAGCTTCAGGGAAAGT...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGATTGGCAGGTGTCTCTaGCAGCAGCTCCACGTAGAG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWIGRCL*QQLHVE
Trigger: CTCTACGTGGAGCTGCTGTCAGAGACACCTGCCAAT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR TCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTCCTCGGGACCTCTTTaGAGTGCAATACGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWSSGPL*SAIRSP
Trigger: AGGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGAAAGACAATTTCTCTaGCCCTTGGGATGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWERQFL*PLGWRG
Trigger: GCCCCTCCATCCCAAGGGGCAGAGAAATTGTCTTTC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGCACCTGGATCTCAATaGCGTAGCCAGGGTAGACAT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWAPGSQ*RSQGRH
Trigger: ATGTCTACCCTGGCTACGGCATTGAGATCCAGGTGC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR GCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGAGTGACATTTCCATGTaGCAGGAAGGGGGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWSDISM*QEGGEA
Trigger: TGCTTCGCCCCCTTCCTGGCACATGGAAATGTCACT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGTCCTTCTCCAAGCATaGATGAGTTGGCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWVLLQA*MSWPGV
Trigger: GACTCCTGGCCAACTCATCCATGCTTGGAGAAGGAC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTCCAGTGGGGTTCTGTaGGATCCACACATTCGATGG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWSSGVL*DPHIRW
Trigger: CCATCGAATGTGTGGATCCCACAGAACCCCACTGGA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGCAAGACAGGTCCCACTaGCAAGTGAGAATGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWQDRSH*QVRMSE
Trigger: CTCCGACATTCTCACTTGCCAGTGGGACCTGTCTTG...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGCCGTGATGGATCTGTaGTCTGGGTCACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWAVMDL*SGSLPV
Trigger: AACTGGAAGTGACCCAGACCACAGATCCATCACGGC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWLTAGD*QVSLTA
Trigger: TGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGTCTTGGGGTTCAGATaGAAACTTCATACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWVLGFR*KLHTPA
Trigger: CGCGGGAGTATGAAGTTTCCATCTGAACCCCAAGAC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGTTATTACACAGAACTaGGCTGGTCACCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWVITQN*AGHRSG
Trigger: ACCACTACGGTGACCAGCCCAGTTCTGTGTAATAAC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CCA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGACTTTCCCTGAAGCTTaGTGTAGTAGATGTAAACGC +
Preference number: 4 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWTFPEA*CSRCKR
Trigger: GCGTTTACATCTACTACACCAAGCTTCAGGGAAAGT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS CCA 90 bp GCTGCCCCCTCGAGGCTGTACCCTGGCAGGCAGCGGTACTGGACGTaGGAGCCAACGGGGAAGCCGGCGTCCGAGGCGGTGCGGTGCCCG +
Preference number: 5 (lower is better)
Translates to: AAPSRLYPGRQRYWT*EPTGKPASEAVRCP
Trigger: CGGGCACCGCACCGCCTCGGACGCCGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAGGGGGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS CCA 90 bp GGTGACGGCTGTTGTCAGAGGCCCTGTCCCCGGCTCAGTGGCCCGTaGCAGGGAGGGCACTGCGAGAGTCTGGCCGGCCGGAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GDGCCQRPCPRLSGP*QGGHCESLAGRRGG
Trigger: GCCACCCCTCCGGCCGGCCAGACTCTCGCAGTGCCCTCCCTGCCACGGGCCACTGAGCCGGGGACAGGGCCTCTGACAACAGCCGTCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
ENST00000562159.1
ENST00000568380.1
ENST00000617533.5
CDS CCA 90 bp CCCGTGGCAGGGAGGGCACTGCGAGAGTCTGGCCGGCCGGAGGGGTaGCTAGCGTGGGGTCCCGATCAGATCCCTGGATCCAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PVAGRALRESGRPEG*LAWGPDQIPGSRDS
Trigger: GCTGTCCCTGGATCCAGGGATCTGATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCCAGACTCTCGCAGTGCCCTCCCTGCCACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537485.5
ENST00000568380.1
CDS TCA 90 bp ACGAAGCCCTGGCCCAGGCCTGGATTTGGGGGCCCGGGCGGTGCCTaGAACTGCAGTGTGAGGTCGGGCCCAGAGGAGAGAAGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: TKPWPRPGFGGPGGA*NCSVRSGPEERRRR
Trigger: CCGCCGCCTTCTCTCCTCTGGGCCCGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CCA 90 bp CCCGTGGCAGGGAGGGCACTGCGAGAGTCTGGCCGGCCGGAGGGGTaGCTAGCGTGGGGTCCCGATCAGATCCTGGCAGGTAGCCCATCT +
Preference number: 5 (lower is better)
Translates to: PVAGRALRESGRPEG*LAWGPDQILAGSPS
Trigger: AGATGGGCTACCTGCCAGGATCTGATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCCAGACTCTCGCAGTGCCCTCCCTGCCACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000562159.1
ENST00000617533.5
CDS CCA 90 bp CCGGCTGTAGCAGGTGAGCATGGCTGCCCCCTCGAGGCTGTACCCTaGCAGGCAGCGGTACTGGACGTGGGAGCCAACGGGGAAGCCGGC +
Preference number: 5 (lower is better)
Translates to: PAVAGEHGCPLEAVP*QAAVLDVGANGEAG
Trigger: GCCGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGCTACAGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGGCCCAGGCCTGGATTaGGGGGCCCGGGCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQGPGLD*GARAVP
Trigger: AGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS CCA 90 bp GACCCAACGGCAGGTGAGGTTGGGCCCTACGGCTCCCCCAGGCTCTaGGGACACGATGCGGCCCAGGGTGGCATTGTGGATGGTGCCACC +
Preference number: 5 (lower is better)
Translates to: DPTAGEVGPYGSPRL*GHDAAQGGIVDGAT
Trigger: GGTGGCACCATCCACAATGCCACCCTGGGCCGCATCGTGTCCCCAGAGCCTGGGGGAGCCGTAGGGCCCAACCTCACCTGCCGTTGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGGCCCAGGCCTGGATTaGGGGGCCCGGGCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDGPGLD*GARAVP
Trigger: AGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS GCA 90 bp CAATACGAAGCCCTGGCCCAGGCCTGGATTTGGGGGCCCGGGCGGTaGCTGAAACTGCAGTGTGAGGTCGGGCCCAGAGGAGAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: QYEALAQAWIWGPGR*LKLQCEVGPRGEKA
Trigger: CGCCTTCTCTCCTCTGGGCCCGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTATCGGGGGCAGTCCTaGAGGGGTGCCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQYRGQS*RGALGR
Trigger: CCTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS TCA 90 bp GAATGTCGGAGCCTAGCAGCTCGTAGCCAGGCTCGCACTGGTAGGTaGGCACCGTGCCCCGGATCAGGTCCCCGTGGGATGCCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ECRSLAARSQARTGR*APCPGSGPRGMPFS
Trigger: GGAGAACGGCATCCCACGGGGACCTGATCCGGGGCACGGTGCTCACCTACCAGTGCGAGCCTGGCTACGAGCTGCTAGGCTCCGACATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCGGCCCAGGGTGGCATaGTGGATGGTGCCACCACAG +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEERPRVA*WMVPPQ
Trigger: CTGTGGTGGCACCATCCACAATGCCACCCTGGGCCG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCGGCCCAGGGTGGCATaGTGGATGGTGCCACCACAG +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQRPRVA*WMVPPQ
Trigger: CTGTGGTGGCACCATCCACAATGCCACCCTGGGCCG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGCCCCACACGCAGTCTaGGCCCGGGCTATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QEAETGSRISLCPNEEGRAPHAV*ARAIAL
Trigger: CAGAGCTATAGCCCGGGCCAAGACTGCGTGTGGGGC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAACCCTATCGCTCCACTaGGGTGTGCCTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPETLSLH*GVPVSR
Trigger: CCGGGACACAGGCACACCCAAGTGGAGCGATAGGGT...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGAAGGGGGCAAGGCCTaGTCCCAGCTCTCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEEGGKA*SQLSPL
Trigger: CAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS GCA 90 bp GGGCCCAGGGGGCTCCAGGGCATATCCTGGGAGGCACGAGAAGGTTaGCAGTGCCCCTGGGCGATACTCAGGGTCCGTGGTAGTGACATT +
Preference number: 5 (lower is better)
Translates to: GPRGLQGISWEAREG*QCPWAILRVRGSDI
Trigger: AATGTCACTACCACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAGCCCCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS CCA 90 bp GACCTCTTTGAAGTGCAATACGAAGCCCTGGCCCAGGCCTGGATTTaGGGGCCCGGGCGGTGCCTGAAACTGCAGTGTGAGGTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: DLFEVQYEALAQAWI*GPGRCLKLQCEVGP
Trigger: GGGCCCGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCACTTCAAAGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS-3UTR CAA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGCAGAAGCAGCCGGTaGGTTGGGCTCCGAAGGACT +
Preference number: 5 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPECRSSR*VGLRRT
Trigger: AGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCA...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGATGGCCGGGTGCCATaGAGGCAGATGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQDGRVP*RQMRVS
Trigger: GGAGACCCTCATCTGCCTCAATGGCACCCGGCCATC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGACAAGTCATGATCTTTaGGCAGGCGGGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEETSHDL*AGGRRG
Trigger: GCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTGT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGACCCTATCGCTCCACTaGGGTGTGCCTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEETLSLH*GVPVSR
Trigger: CCGGGACACAGGCACACCCAAGTGGAGCGATAGGGT...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGACCCTATCGCTCCACTaGGGTGTGCCTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQTLSLH*GVPVSR
Trigger: CCGGGACACAGGCACACCCAAGTGGAGCGATAGGGT...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGTGGTCTGGGTCACTTaGCAGAGTGGGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQVVWVT*QSGGWL
Trigger: CAGCCAGCCCCCACTCTGCAAAGTGACCCAGACCAC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308713.9
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGAAGGGGGCAAGGCCTaGTCCCAGCTCTCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEEEGGKA*SQLSPL
Trigger: CAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS CCA 90 bp GCTCAGGAGGTAGGCCTGATAGTGGATCCTGAAGCCACCGCCCCTTaGGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTTGGTTGG +
Preference number: 5 (lower is better)
Translates to: AQEVGLIVDPEATAP*DPWALEVQKQPVGW
Trigger: CCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTCAGGATCCACTATCAGGCCTACCTCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CCA 90 bp CCTCGGGACCTCTTTGAAGTGCAATACGAAGCCCTGGCCCAGGCCTaGATTTGGGGGCCCGGGCGGTGCCTGAAACTGCAGTGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: PRDLFEVQYEALAQA*IWGPGRCLKLQCEV
Trigger: GACCTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS-3UTR CAA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGGAAGCAGCCGGTTGGTaGGGCTCCGAAGGACTTGTC +
Preference number: 5 (lower is better)
Translates to: QEAETGSRISLCPNEEGREAAGW*GSEGLV
Trigger: GACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTC...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCAACGGCAGGTGAGGTaGGGCCCTACGGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGQRQVR*GPTAPP
Trigger: TGGGGGAGCCGTAGGGCCCAACCTCACCTGCCGTTG...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGGCGGTGCGGTGCCCGTaGGCAATCTCGCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGAVRCP*AISPGS
Trigger: TGACCCTGGCGAGATTGCCAACGGGCACCGCACCGC...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAAGCTTCATACAGCGGGTaGCTGAAGTCCGACTCCACG +
Preference number: 5 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPEASYSG*LKSDST
Trigger: CGTGGAGTCGGACTTCAGCAACCCGCTGTATGAAGC...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGGGCAGGCCCCTCGTTaGGCAACTGAGAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDGQAPR*ATEKRR
Trigger: CCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCCC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGAGGGGCTGCAAGATTaGCAGGGAGGCAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEEEGLQD*QGGRVP
Trigger: GGGAACTCTGCCTCCCTGCAAATCTTGCAGCCCCTC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGGAGGGGCTGCAAGATTaGCAGGGAGGCAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQEGLQD*QGGRVP
Trigger: GGGAACTCTGCCTCCCTGCAAATCTTGCAGCCCCTC...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGTATCGGGGGCAGTCCTaGAGGGGTGCCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGYRGQS*RGALGR
Trigger: CCTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATA...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS GCA 90 bp TGGATCCTGAAGCCACCGCCCCTTGGGACCCGTGGGCTCTGGAAGTaGAGAAGCAGCCGGTTGGTTGGGCTCCGAAGGACTTGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: WILKPPPLGTRGLWK*RSSRLVGLRRTCPS
Trigger: AGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTCAGGATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACACAAGTCATGATCTTTaGGCAGGCGGGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDTSHDL*AGGRRG
Trigger: GCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTGT...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGCTTCATACAGCGGGTaGCTGAAGTCCGACTCCACG +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEEASYSG*LKSDST
Trigger: CGTGGAGTCGGACTTCAGCAACCCGCTGTATGAAGC...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGAAGGGGGCAAGGCCTaGTCCCAGCTCTCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDEGGKA*SQLSPL
Trigger: CAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS GCA 90 bp AGGGGGCTCCAGGGCATATCCTGGGAGGCACGAGAAGGTTGCCAGTaGCCCTGGGCGATACTCAGGGTCCGTGGTAGTGACATTTCCATG +
Preference number: 5 (lower is better)
Translates to: RGLQGISWEAREGCQ*PWAILRVRGSDISM
Trigger: CATGGAAATGTCACTACCACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS CCA 90 bp CGCCCCTTGGGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTTaGTTGGGCTCCGAAGGACTTGTCCTTCTCCAAGCATGGATGAGT +
Preference number: 5 (lower is better)
Translates to: RPLGPVGSGSAEAAG*LGSEGLVLLQAWMS
Trigger: ACTCATCCATGCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACGAAGCAGCCGGTTGGTaGGGCTCCGAAGGACTTGTC +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDEAAGW*GSEGLV
Trigger: GACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTC...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTGCAGAAGCAGCCGGTaGGTTGGGCTCCGAAGGACT +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDCRSSR*VGLRRT
Trigger: AGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCACAACGGCAGGTGAGGTaGGGCCCTACGGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPQRQVR*GPTAPP
Trigger: TGGGGGAGCCGTAGGGCCCAACCTCACCTGCCGTTG...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCAACGGCAGGTGAGGTaGGGCCCTACGGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIQRQVR*GPTAPP
Trigger: TGGGGGAGCCGTAGGGCCCAACCTCACCTGCCGTTG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCTTAACAGCAGGGGATaGGCAGGTGTCTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQLNSRG*AGVSDS
Trigger: GCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGCTTAACAGCAGGGGATaGGCAGGTGTCTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEELNSRG*AGVSDS
Trigger: GCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAG...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGCTTAACAGCAGGGGATaGGCAGGTGTCTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: QEAETGSRISLCPNEEGRLNSRG*AGVSDS
Trigger: GCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAG...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGACCCTATCGCTCCACTaGGGTGTGCCTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PGPSKPPRGIGRLFTQPGTLSLH*GVPVSR
Trigger: CCGGGACACAGGCACACCCAAGTGGAGCGATAGGGT...CCCTGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGTACTTCAAGGCGCATTaGGGGACCCTATCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: QEAETGSRISLCPNEEGRYFKAH*GTLSLH
Trigger: GTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGTA...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCATATCGGGGGCAGTCCTaGAGGGGTGCCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPYRGQS*RGALGR
Trigger: CCTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATA...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS GCA 90 bp ACCATCAGCCGGTCATTGTCCTCATCCAGCGAGACCCTTTCAAAGTaGAGGTGCAGCCGGCGCCCCTCAGCTGCTTCAATGACCCAACGG +
Preference number: 5 (lower is better)
Translates to: TISRSLSSSSETLSK*RCSRRPSAASMTQR
Trigger: CCGTTGGGTCATTGAAGCAGCTGAGGGGCGCCGGCTGCACCTGCACTTTGAAAGGGTCTCGCTGGATGAGGACAATGACCGGCTGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS CCA 90 bp CTCCAGGGCATATCCTGGGAGGCACGAGAAGGTTGCCAGTGCCCCTaGGCGATACTCAGGGTCCGTGGTAGTGACATTTCCATGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LQGISWEAREGCQCP*AILRVRGSDISMCQ
Trigger: CTGGCACATGGAAATGTCACTACCACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGCAATTTCTCTGCCCCTaGGGATGGAGGGGCAGAATT +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQQFLCP*GWRGRI
Trigger: AATTCTGCCCCTCCATCCCAAGGGGCAGAGAAATTG...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000537485.5
CDS-3UTR CAA 90 bp GGAGGAGGGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATCGCCCTCGGAGATGTaGTTATTACACAGAACTGGG +
Preference number: 5 (lower is better)
Translates to: GGGQPGGRDRVPYFPLPESPSEM*LLHRTG
Trigger: CCCAGTTCTGTGTAATAACAACATCTCCGAGGGCGA...TTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCCCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCGGCCCAGGGTGGCATaGTGGATGGTGCCACCACAG +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIRPRVA*WMVPPQ
Trigger: CTGTGGTGGCACCATCCACAATGCCACCCTGGGCCG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGCCCCACACGCAGTCTaGGCCCGGGCTATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIAPHAV*ARAIAL
Trigger: CAGAGCTATAGCCCGGGCCAAGACTGCGTGTGGGGC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GCCAAGGGAACAGTAGAGCTATCGGGGGCAGTCCTTGAGGGGTGCCCTGGGCAGTTCCTCGGGACCTCTTaGAAGTGCAATACGAAGCCC +
Preference number: 5 (lower is better)
Translates to: AKGTVELSGAVLEGCPGQFLGTS*KCNTKP
Trigger: GGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGAA...CTGCCCAGGGCACCCCTCAAGGACTGCCCCCGATAGCTCTACTGTTCCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGCCAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGTTCCTCGGGACCTCTTaGAAGTGCAATACGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GSQEAETGSRISLCPNEEFLGTS*KCNTKP
Trigger: GGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGAA...CTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTGGGCAGGCCCCTCGTTaGGCAACTGAGAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIGQAPR*ATEKRR
Trigger: CCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCCC...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAGGGCAGGCCCCTCGTTaGGCAACTGAGAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPGQAPR*ATEKRR
Trigger: CCGCCTCTTCTCAGTTGCCAAACGAGGGGCCTGCCC...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTCCTCCACACATGGCTTaGCAGGCCGGCTCTGTGTCG +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIPPHMA*QAGSVS
Trigger: CGACACAGAGCCGGCCTGCAAAGCCATGTGTGGAGG...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGGCCCAGGCCTGGATTaGGGGGCCCGGGCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRGPGLD*GARAVP
Trigger: AGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCAACAAGTCATGATCTTTaGGCAGGCGGGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPTSHDL*AGGRRG
Trigger: GCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTGT...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGCGGTGCGGTGCCCGTaGGCAATCTCGCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGAVRCP*AISPGS
Trigger: TGACCCTGGCGAGATTGCCAACGGGCACCGCACCGC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTACTTCAAGGCGCATTaGGGGACCCTATCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDYFKAH*GTLSLH
Trigger: GTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGTA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS GCA 90 bp TGCCCCTGGGCGATACTCAGGGTCCGTGGTAGTGACATTTCCATGTaGCAGGAAGGGGGCGAAGCAGCGATCCTCCTCAAAGGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: CPWAILRVRGSDISM*QEGGEAAILLKGFK
Trigger: TTTGAAGCCTTTGAGGAGGATCGCTGCTTCGCCCCCTTCCTGGCACATGGAAATGTCACTACCACGGACCCTGAGTATCGCCCAGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS CCA 90 bp CCCCTCCACACATGGCTTCAAATCGAAGGCTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCAGCTCCACGTAGAGGGACTGGGCGT +
Preference number: 5 (lower is better)
Translates to: PLHTWLQIEGLTAGD*QVSLTAAPRRGTGR
Trigger: ACGCCCAGTCCCTCTACGTGGAGCTGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAGCCTTCGATTTGAAGCCATGTGTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563118.1
CDS-3UTR CAA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGCCCCACACGCAGTCTaGGCCCGGGCTATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGAPHAV*ARAIAL
Trigger: CAGAGCTATAGCCCGGGCCAAGACTGCGTGTGGGGC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp GGCAGGAAGGGGGCAAGGCCTTGTCCCAGCTCTCCCCTTTGTCCTTCTTCTGACTCGCCCTCGGAGATGTaGTTATTACACAGAACTGGG +
Preference number: 5 (lower is better)
Translates to: GRKGARPCPSSPLCPSSDSPSEM*LLHRTG
Trigger: CCCAGTTCTGTGTAATAACAACATCTCCGAGGGCGA...GTCAGAAGAAGGACAAAGGGGAGAGCTGGGACAAGGCCTTGCCCCCTTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGATGGCCGGGTGCCATaGAGGCAGATGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGDGRVP*RQMRVS
Trigger: GGAGACCCTCATCTGCCTCAATGGCACCCGGCCATC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTACCATCAGCCGGTCATaGTCCTCATCCAGCGAGACC +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFITISRS*SSSSET
Trigger: GGTCTCGCTGGATGAGGACAATGACCGGCTGATGGT...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTCCTCCACACATGGCTTaGCAGGCCGGCTCTGTGTCG +
Preference number: 5 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCPPHMA*QAGSVS
Trigger: CGACACAGAGCCGGCCTGCAAAGCCATGTGTGGAGG...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS CCA 90 bp GATCCTCCTCAAAGGCTTCAAATCGAAGGCTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCAGCTCCACGTAGAGGGACTGGGCGT +
Preference number: 5 (lower is better)
Translates to: DPPQRLQIEGLTAGD*QVSLTAAPRRGTGR
Trigger: ACGCCCAGTCCCTCTACGTGGAGCTGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAGCCTTCGATTTGAAGCCTTTGAGGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS-3UTR CAA 90 bp CAGGAGGCAGAGACCGGGTCCCGTATTTCCCTCTGCCCGAATGAGGAGGGGAGGATTCAATATCTCAACTaGGAGCAAGATGCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: QEAETGSRISLCPNEEGRIQYLN*EQDALL
Trigger: GAGAAGCGCATCTTGCTCCAAGTTGAGATATTGAAT...CCTCCCCTCCTCATTCGGGCAGAGGGAAATACGGGACCCGGTCTCTGCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCGGTGCGGTGCCCGTaGGCAATCTCGCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAVRCP*AISPGS
Trigger: TGACCCTGGCGAGATTGCCAACGGGCACCGCACCGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TCTCCAGGGCCATCAAAGCCCCCTCGTGGGATAGGGAGACTATTTACACAGCCATACTTCAAGGCGCATTaGGGGACCCTATCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SPGPSKPPRGIGRLFTQPYFKAH*GTLSLH
Trigger: GTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGTA...TGGCTGTGTAAATAGTCTCCCTATCCCACGAGGGGGCTTTGATGGCCCTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTACCATCAGCCGGTCATaGTCCTCATCCAGCGAGACC +
Preference number: 5 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCTISRS*SSSSET
Trigger: GGTCTCGCTGGATGAGGACAATGACCGGCTGATGGT...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGCCCCACACGCAGTCTaGGCCCGGGCTATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRAPHAV*ARAIAL
Trigger: CAGAGCTATAGCCCGGGCCAAGACTGCGTGTGGGGC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTAGGAGCTTCATACAGCGGGTaGCTGAAGTCCGACTCCACG +
Preference number: 5 (lower is better)
Translates to: QLRRGGFGRQDAGLFTVGASYSG*LKSDST
Trigger: CGTGGAGTCGGACTTCAGCAACCCGCTGTATGAAGC...TCCTACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTTGGGCTCCGAAGGACTaGTCCTTCTCCAAGCATGGA +
Preference number: 5 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCWAPKD*SFSKHG
Trigger: TCCATGCTTGGAGAAGGACAAGTCCTTCGGAGCCCA...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACCTCCACACATGGCTTaGCAGGCCGGCTCTGTGTCG +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRPPHMA*QAGSVS
Trigger: CGACACAGAGCCGGCCTGCAAAGCCATGTGTGGAGG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAGAAGCAGCCGGTTGGTaGGGCTCCGAAGGACTTGTC +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGREAAGW*GSEGLV
Trigger: GACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTC...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATGCAGAAGCAGCCGGTaGGTTGGGCTCCGAAGGACT +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRCRSSR*VGLRRT
Trigger: AGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGAACCATCAGCCGGTCATaGTCCTCATCCAGCGAGACC +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRTISRS*SSSSET
Trigger: GGTCTCGCTGGATGAGGACAATGACCGGCTGATGGT...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGACTTAACAGCAGGGGATaGGCAGGTGTCTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRLNSRG*AGVSDS
Trigger: GCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAG...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp CCTCGTTTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTATTCAATATCTCAACTaGGAGCAAGATGCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PRLATEKRRLWAAGCWFIIQYLN*EQDALL
Trigger: GAGAAGCGCATCTTGCTCCAAGTTGAGATATTGAAT...AATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAAACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGACAAGTCATGATCTTTaGGCAGGCGGGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWTSHDL*AGGRRG
Trigger: GCCGCGCCGCCCGCCTGCCAAAAGATCATGACTTGT...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATTCCTCGGGACCTCTTaGAAGTGCAATACGAAGCCC +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRFLGTS*KCNTKP
Trigger: GGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGAA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGAGGGGCTGCAAGATTaGCAGGGAGGCAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWEGLQD*QGGRVP
Trigger: GGGAACTCTGCCTCCCTGCAAATCTTGCAGCCCCTC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGGAGATCGCCCTCGGAGATGTaGTTATTACACAGAACTGGG +
Preference number: 5 (lower is better)
Translates to: CSKTRIQKQRWRDCGLGRSPSEM*LLHRTG
Trigger: CCCAGTTCTGTGTAATAACAACATCTCCGAGGGCGA...TCTCCCCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTGGCAACTGAGAAGAGGCGGCTTTGGGCGGCAGGATGCTGGTTTATTTACTGTATTCAATATCTCAACTaGGAGCAAGATGCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LATEKRRLWAAGCWFIYCIQYLN*EQDALL
Trigger: GAGAAGCGCATCTTGCTCCAAGTTGAGATATTGAAT...ACAGTAAATAAACCAGCATCCTGCCGCCCAAAGCCGCCTCTTCTCAGTTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGGCTTCATACAGCGGGTaGCTGAAGTCCGACTCCACG +
Preference number: 5 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWASYSG*LKSDST
Trigger: CGTGGAGTCGGACTTCAGCAACCCGCTGTATGAAGC...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTACTTCAAGGCGCATTaGGGGACCCTATCGCTCCAC +
Preference number: 5 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWYFKAH*GTLSLH
Trigger: GTGGAGCGATAGGGTCCCCAAATGCGCCTTGAAGTA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS-3UTR CAA 90 bp TTTATTGCTCAAAAACAAGAATTCAGAAGCAAAGGTGGAGAGACTGTGGGTTGGTTCCTCGGGACCTCTTaGAAGTGCAATACGAAGCCC +
Preference number: 5 (lower is better)
Translates to: FIAQKQEFRSKGGETVGWFLGTS*KCNTKP
Trigger: GGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGAA...CCAACCCACAGTCTCTCCACCTTTGCTTCTGAATTCTTGTTTTTGAGCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
CDS CCA 72 bp GGGTGGGGCCGAGAGGGCCGAAGGGGCCGGGTGGCCTaGGTTACCCTCCTGCTCAGGCGCCTGGGTCCACTG +
Preference number: 6 (lower is better)
Translates to: GWGREGRRGRVA*VTLLLRRLGPL
Trigger: CAGTGGACCCAGGCGCCTGAGCAGGAGGGTAACCCAGGCCACCCGGCCCCTTCGGCCCTCTCGGCCCCACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308713.9
ENST00000617533.5
CDS CCA 72 bp TGTTGTCAGAGGCCCTGTCCCCGGCTCAGTGGCCCGTaGCAGGGAGGGCACTGCGAGAGTCTGGCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: CCQRPCPRLSGP*QGGHCESLAGR
Trigger: CCGGCCGGCCAGACTCTCGCAGTGCCCTCCCTGCCACGGGCCACTGAGCCGGGGACAGGGCCTCTGACAACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000537485.5
ENST00000562159.1
ENST00000568380.1
ENST00000617533.5
CDS GCA 72 bp GCCCTGGCCCAGGCCTGGATTTGGGGGCCCGGGCGGTaGCTGAAACTGCAGTGTGAGGTCGGGCCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: ALAQAWIWGPGR*LKLQCEVGPRG
Trigger: TCCTCTGGGCCCGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp GCTGAGGTCCCCGCAGCTGGGCCAAGACTCGGGCGCTaGGACCGTCCCCGTCGAACAGCGTCAGCATGTCCC +
Preference number: 6 (lower is better)
Translates to: AEVPAAGPRLGR*DRPRRTASACP
Trigger: GGGACATGCTGACGCTGTTCGACGGGGACGGTCCCAGCGCCCGAGTCTTGGCCCAGCTGCGGGGACCTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp CCCGTGGGATGCCGTTCTCCAGCCCCACTCCGGAGGTaGCAGCTCGGGGCACGTGTCGTTCCTCGGGACCTC +
Preference number: 6 (lower is better)
Translates to: PVGCRSPAPLRR*QLGARVVPRDL
Trigger: GAGGTCCCGAGGAACGACACGTGCCCCGAGCTGCCACCTCCGGAGTGGGGCTGGAGAACGGCATCCCACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp TCGAGGCTGTACCCTGGCAGGCAGCGGTACTGGACGTaGGAGCCAACGGGGAAGCCGGCGTCCGAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: SRLYPGRQRYWT*EPTGKPASEAV
Trigger: CACCGCCTCGGACGCCGGCTTCCCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS GCA 72 bp GAGCCAACGGGGAAGCCGGCGTCCGAGGCGGTGCGGTaGCCGTTGGCAATCTCGCCAGGGTCAGCACAAGTC +
Preference number: 6 (lower is better)
Translates to: EPTGKPASEAVR*PLAISPGSAQV
Trigger: GACTTGTGCTGACCCTGGCGAGATTGCCAACGGGCACCGCACCGCCTCGGACGCCGGCTTCCCCGTTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS CCA 72 bp GCAGGTGAGCATGGCTGCCCCCTCGAGGCTGTACCCTaGCAGGCAGCGGTACTGGACGTGGGAGCCAACGGG +
Preference number: 6 (lower is better)
Translates to: AGEHGCPLEAVP*QAAVLDVGANG
Trigger: CCCGTTGGCTCCCACGTCCAGTACCGCTGCCTGCCAGGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS CCA 72 bp CTGCGAGAGTCTGGCCGGCCGGAGGGGTGGCTAGCGTaGGGTCCCGATCAGATCCCTGGATCCAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: LRESGRPEGWLA*GPDQIPGSRDS
Trigger: GCTGTCCCTGGATCCAGGGATCTGATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCCAGACTCTCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537485.5
ENST00000568380.1
CDS TCA 72 bp TGGCCCAGGCCTGGATTTGGGGGCCCGGGCGGTGCCTaGAACTGCAGTGTGAGGTCGGGCCCAGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: WPRPGFGGPGGA*NCSVRSGPEER
Trigger: TCTCTCCTCTGGGCCCGACCTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS GCA 72 bp AGCAGAATTAGGAACAGCAGCTGGGGAGGCGGCGGGTaGTGGGCCCTGGGAGTCCCCATGGCGACTCACCCC +
Preference number: 6 (lower is better)
Translates to: SRIRNSSWGGGG*WALGVPMATHP
Trigger: GGGGTGAGTCGCCATGGGGACTCCCAGGGCCCAGCACCCGCCGCCTCCCCAGCTGCTGTTCCTAATTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568380.1
ENST00000617533.5
CDS CCA 72 bp CTGCGAGAGTCTGGCCGGCCGGAGGGGTGGCTAGCGTaGGGTCCCGATCAGATCCTGGCAGGTAGCCCATCT +
Preference number: 6 (lower is better)
Translates to: LRESGRPEGWLA*GPDQILAGSPS
Trigger: AGATGGGCTACCTGCCAGGATCTGATCGGGACCCCACGCTAGCCACCCCTCCGGCCGGCCAGACTCTCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000562159.1
ENST00000617533.5
CDS TCA 72 bp AGCCTAGCAGCTCGTAGCCAGGCTCGCACTGGTAGGTaGGCACCGTGCCCCGGATCAGGTCCCCGTGGGATG +
Preference number: 6 (lower is better)
Translates to: SLAARSQARTGR*APCPGSGPRGM
Trigger: CATCCCACGGGGACCTGATCCGGGGCACGGTGCTCACCTACCAGTGCGAGCCTGGCTACGAGCTGCTAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS GCA 72 bp TGTGCCTGTGTCCCGGCTGTAGCAGGTGAGCATGGCTaGCCCCTCGAGGCTGTACCCTGGCAGGCAGCGGTA +
Preference number: 6 (lower is better)
Translates to: CACVPAVAGEHG*PLEAVPWQAAV
Trigger: TACCGCTGCCTGCCAGGGTACAGCCTCGAGGGGGCAGCCATGCTCACCTGCTACAGCCGGGACACAGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS CCA 72 bp GGCTCTGGGGACACGATGCGGCCCAGGGTGGCATTGTaGATGGTGCCACCACAGGATGCCATGCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GSGDTMRPRVAL*MVPPQDAMQLG
Trigger: CCCCAGCTGCATGGCATCCTGTGGTGGCACCATCCACAATGCCACCCTGGGCCGCATCGTGTCCCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS CAA 72 bp ACGGGGAAGCCGGCGTCCGAGGCGGTGCGGTGCCCGTaGGCAATCTCGCCAGGGTCAGCACAAGTCATGATC +
Preference number: 6 (lower is better)
Translates to: TGKPASEAVRCP*AISPGSAQVMI
Trigger: GATCATGACTTGTGCTGACCCTGGCGAGATTGCCAACGGGCACCGCACCGCCTCGGACGCCGGCTTCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS TCA 72 bp GCGGCGCGGCGCTCCAAGACAGGTCCCACTGGCAAGTaGGAATGTCGGAGCCTAGCAGCTCGTAGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: AARRSKTGPTGK*ECRSLAARSQA
Trigger: AGCCTGGCTACGAGCTGCTAGGCTCCGACATTCTCACTTGCCAGTGGGACCTGTCTTGGAGCGCCGCGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS GCA 72 bp AAGCCACCGCCCCTTGGGACCCGTGGGCTCTGGAAGTaGAGAAGCAGCCGGTTGGTTGGGCTCCGAAGGACT +
Preference number: 6 (lower is better)
Translates to: KPPPLGTRGLWK*RSSRLVGLRRT
Trigger: AGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS GCA 72 bp GGGCTCCAGGGCATATCCTGGGAGGCACGAGAAGGTTaGCAGTGCCCCTGGGCGATACTCAGGGTCCGTGGT +
Preference number: 6 (lower is better)
Translates to: GLQGISWEAREG*QCPWAILRVRG
Trigger: ACCACGGACCCTGAGTATCGCCCAGGGGCACTGGCAACCTTCTCGTGCCTCCCAGGATATGCCCTGGAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp ATCCTGAAGCCACCGCCCCTTGGGACCCGTGGGCTCTaGAAGTGCAGAAGCAGCCGGTTGGTTGGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: ILKPPPLGTRGL*KCRSSRLVGLR
Trigger: TCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTCAGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CCA 72 bp TTCCTCGGGACCTCTTTGAAGTGCAATACGAAGCCCTaGCCCAGGCCTGGATTTGGGGGCCCGGGCGGTGCC +
Preference number: 6 (lower is better)
Translates to: FLGTSLKCNTKP*PRPGFGGPGGA
Trigger: GGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCACTTCAAAGAGGTCCCGAGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CAA 72 bp CTTCTCTTCCTGGACGTGCACGCCCCACACGCAGTCTaGGCCCGGGCTATAGCTCTGGGGCCAGTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: LLFLDVHAPHAV*ARAIALGPVGR
Trigger: TCTCCCGACTGGCCCCAGAGCTATAGCCCGGGCCAAGACTGCGTGTGGGGCGTGCACGTCCAGGAAGAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CAA 90 bp CAAGATGCGCTTCTCTTCCTGGACGTGCACGCCCCACACGCAGTCTaGGCCCGGGCTATAGCTCTGGGGCCAGTCGGGAGAGAGGACCAC +
Preference number: 6 (lower is better)
Translates to: QDALLFLDVHAPHAV*ARAIALGPVGREDH
Trigger: GTGGTCCTCTCTCCCGACTGGCCCCAGAGCTATAGCCCGGGCCAAGACTGCGTGTGGGGCGTGCACGTCCAGGAAGAGAAGCGCATCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CAA 90 bp TGGGAGCCAACGGGGAAGCCGGCGTCCGAGGCGGTGCGGTGCCCGTaGGCAATCTCGCCAGGGTCAGCACAAGTCATGATCTTTTGGCAG +
Preference number: 6 (lower is better)
Translates to: WEPTGKPASEAVRCP*AISPGSAQVMIFWQ
Trigger: CTGCCAAAAGATCATGACTTGTGCTGACCCTGGCGAGATTGCCAACGGGCACCGCACCGCCTCGGACGCCGGCTTCCCCGTTGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS TCA 72 bp AGCCACAGCTCAGGAGGTAGGCCTGATAGTGGATCCTaGAGCCACCGCCCCTTGGGACCCGTGGGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: SHSSGGRPDSGS*SHRPLGPVGSG
Trigger: TCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTCAGGATCCACTATCAGGCCTACCTCCTGAGCTGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CCA 72 bp GTAGGCCTGATAGTGGATCCTGAAGCCACCGCCCCTTaGGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: VGLIVDPEATAP*DPWALEVQKQP
Trigger: CGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCGGTGGCTTCAGGATCCACTATCAGGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CCA 72 bp GAAGTGCAATACGAAGCCCTGGCCCAGGCCTGGATTTaGGGGCCCGGGCGGTGCCTGAAACTGCAGTGTGAG +
Preference number: 6 (lower is better)
Translates to: EVQYEALAQAWI*GPGRCLKLQCE
Trigger: CTCACACTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CAA 72 bp CTGGGGGTTTCACCGTTCCAGGATGGCCGGGTGCCATaGAGGCAGATGAGGGTCTCCTCTCCCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LGVSPFQDGRVP*RQMRVSSPCSW
Trigger: CCAGCTGCAGGGAGAGGAGACCCTCATCTGCCTCAATGGCACCCGGCCATCCTGGAACGGTGAAACCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CAA 90 bp CCGCCCCTTGGGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTaGGTTGGGCTCCGAAGGACTTGTCCTTCTCCAAGCATGGATGAG +
Preference number: 6 (lower is better)
Translates to: PPLGTRGLWKCRSSR*VGLRRTCPSPSMDE
Trigger: CTCATCCATGCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CCA 72 bp CTCAGAGGCCACCGTGGGGGTCTCACTTCCAGGCTCTaGCAATATCTCCTCCTCCTTCAGGGGCAGACCCTG +
Preference number: 6 (lower is better)
Translates to: LRGHRGGLTSRL*QYLLLLQGQTL
Trigger: CAGGGTCTGCCCCTGAAGGAGGAGGAGATATTGCCAGAGCCTGGAAGTGAGACCCCCACGGTGGCCTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000617533.5
CDS CCA 72 bp CTCTTTGAAGTGCAATACGAAGCCCTGGCCCAGGCCTaGATTTGGGGGCCCGGGCGGTGCCTGAAACTGCAG +
Preference number: 6 (lower is better)
Translates to: LFEVQYEALAQA*IWGPGRCLKLQ
Trigger: CTGCAGTTTCAGGCACCGCCCGGGCCCCCAAATCCAGGCCTGGGCCAGGGCTTCGTATTGCACTTCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp GGGATAGGGGGCTGCCCCCTGAGCGCACCATCAGCCTaGGATGGACAGAAACGTGACCAGGAGCTCAATCTC +
Preference number: 6 (lower is better)
Translates to: GIGGCPLSAPSA*DGQKRDQELNL
Trigger: GAGATTGAGCTCCTGGTCACGTTTCTGTCCATCCCAGGCTGATGGTGCGCTCAGGGGGCAGCCCCCTATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568407.2
CDS CAA 72 bp GGGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTaGGTTGGGCTCCGAAGGACTTGTCCTTCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: GTRGLWKCRSSR*VGLRRTCPSPS
Trigger: GCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CCA 72 bp GGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTTaGTTGGGCTCCGAAGGACTTGTCCTTCTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: GPVGSGSAEAAG*LGSEGLVLLQA
Trigger: TGCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CAA 72 bp CCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTTGGTaGGGCTCCGAAGGACTTGTCCTTCTCCAAGCATGG +
Preference number: 6 (lower is better)
Translates to: PVGSGSAEAAGW*GSEGLVLLQAW
Trigger: CCATGCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS CAA 90 bp CCCTTGGGACCCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTTGGTaGGGCTCCGAAGGACTTGTCCTTCTCCAAGCATGGATGAGTTGG +
Preference number: 6 (lower is better)
Translates to: PLGPVGSGSAEAAGW*GSEGLVLLQAWMSW
Trigger: CCAACTCATCCATGCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGGGTCCCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS GCA 72 bp CGGTCATTGTCCTCATCCAGCGAGACCCTTTCAAAGTaGAGGTGCAGCCGGCGCCCCTCAGCTGCTTCAATG +
Preference number: 6 (lower is better)
Translates to: RSLSSSSETLSK*RCSRRPSAASM
Trigger: CATTGAAGCAGCTGAGGGGCGCCGGCTGCACCTGCACTTTGAAAGGGTCTCGCTGGATGAGGACAATGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000617533.5
CDS CCA 72 bp CCGTGGGCTCTGGAAGTGCAGAAGCAGCCGGTTGGTTaGGCTCCGAAGGACTTGTCCTTCTCCAAGCATGGA +
Preference number: 6 (lower is better)
Translates to: PWALEVQKQPVG*APKDLSFSKHG
Trigger: TCCATGCTTGGAGAAGGACAAGTCCTTCGGAGCCCAACCAACCGGCTGCTTCTGCACTTCCAGAGCCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000562159.1
ENST00000617533.5
CDS GCA 72 bp GCGATACTCAGGGTCCGTGGTAGTGACATTTCCATGTaGCAGGAAGGGGGCGAAGCAGCGATCCTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: AILRVRGSDISM*QEGGEAAILLK
Trigger: TTTGAGGAGGATCGCTGCTTCGCCCCCTTCCTGGCACATGGAAATGTCACTACCACGGACCCTGAGTATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp CACATGGCTTTGCAGGCCGGCTCTGTGTCGTTCCAGTaGGGTTCTGTGGGATCCACACATTCGATGGCATTG +
Preference number: 6 (lower is better)
Translates to: HMALQAGSVSFQ*GSVGSTHSMAL
Trigger: CAATGCCATCGAATGTGTGGATCCCACAGAACCCCACTGGAACGACACAGAGCCGGCCTGCAAAGCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS GCA 72 bp CTTCCCGCACATTCAATATCTCAACTTGGAGCAAGATaGGCTTCTCTTCCTGGACGTGCACGCCCCACACGC +
Preference number: 6 (lower is better)
Translates to: LPAHSISQLGAR*ASLPGRARPTR
Trigger: GCGTGTGGGGCGTGCACGTCCAGGAAGAGAAGCGCATCTTGCTCCAAGTTGAGATATTGAATGTGCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000563118.1
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp CAAAGGCTTCAAATCGAAGGCTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCAGCTCCACGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: QRLQIEGLTAGD*QVSLTAAPRRG
Trigger: CCCTCTACGTGGAGCTGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAGCCTTCGATTTGAAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000568407.2
ENST00000617533.5
CDS CCA 72 bp GTCCTGGGTCCTGCAGCTGTAGTCTTGGGGTTCAGATaGAAACTTCATACTCCCGCGTATCCCCAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: VLGPAAVVLGFR*KLHTPAYPQLH
Trigger: ATGAAGCTGGGGATACGCGGGAGTATGAAGTTTCCATCTGAACCCCAAGACTACAGCTGCAGGACCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308713.9
ENST00000346932.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS CCA 72 bp ACATGGCTTCAAATCGAAGGCTTAACAGCAGGGGATTaGCAGGTGTCTCTGACAGCAGCTCCACGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: TWLQIEGLTAGD*QVSLTAAPRRG
Trigger: CCCTCTACGTGGAGCTGCTGTCAGAGACACCTGCCAATCCCCTGCTGTTAAGCCTTCGATTTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563118.1
CDS CAA 72 bp TCTGGAGACTCCACATACCCTTCGCCCTCGGAGATGTaGTTATTACACAGAACTGGGCTGGTCACCGTAGTG +
Preference number: 6 (lower is better)
Translates to: SGDSTYPSPSEM*LLHRTGLVTVV
Trigger: CACTACGGTGACCAGCCCAGTTCTGTGTAATAACAACATCTCCGAGGGCGAAGGGTATGTGGAGTCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308713.9
ENST00000350527.7
ENST00000537485.5
ENST00000617533.5
CDS CAA 90 bp AAACGTGACCAGGAGCTCAATCTCCCTCACAAGCTGCCTCACCCCTaGCCTGCTTTCCTAACTTATTTTTATAGCTGTTATCATCACACA +
Preference number: 6 (lower is better)
Translates to: KRDQELNLPHKLPHP*PAFLTYFYSCYHHT
Trigger: TGTGTGATGATAACAGCTATAAAAATAAGTTAGGAAAGCAGGCAAGGGGTGAGGCAGCTTGTGAGGGAGATTGAGCTCCTGGTCACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568407.2
CDS CAA 72 bp CAGGAGCTCAATCTCCCTCACAAGCTGCCTCACCCCTaGCCTGCTTTCCTAACTTATTTTTATAGCTGTTAT +
Preference number: 6 (lower is better)
Translates to: QELNLPHKLPHP*PAFLTYFYSCY
Trigger: ATAACAGCTATAAAAATAAGTTAGGAAAGCAGGCAAGGGGTGAGGCAGCTTGTGAGGGAGATTGAGCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568407.2