RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEZ6L (Homo sapiens)

Ensembl gene IDs: ENSG00000100095

Ensembl transcript IDs: ENST00000248933.11, ENST00000343706.8, ENST00000360929.7, ENST00000402979.1, ENST00000403121.5, ENST00000404234.7, ENST00000483291.1, ENST00000494013.1, ENST00000529632.6, ENST00000629590.2

Found 1373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTaGCTGTCACCACCATGTCACCGGTCCCAGGAAGGTGAATCTGCT +
Preference number: 1 (lower is better)
Translates to: RGFQMPLCPSVCPSH*LSPPCHRSQEGESA
Trigger: AGCAGATTCACCTTCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 90 bp TCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGAAGGTaGATCTGCTTCACACATAGTATTTCTTCCATGCACCCGCACCCT +
Preference number: 1 (lower is better)
Translates to: SKPLTVTTMSPVPGR*ICFTHSISSMHPHP
Trigger: AGGGTGCGGGTGCATGGAAGAAATACTATGTGTGAAGCAGATTCACCTTCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp AAACAATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATaGCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCAC +
Preference number: 1 (lower is better)
Translates to: KQFQREWEGTKEGSK*HCARLSVQAIDCHH
Trigger: GTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAATTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp GACATAGGAAGATCATGCCCTTCGGATTCACTCGAAGGGCATTTTTaGCTGAGGCCCGTGCCTCAGCCTAAAGCTACCCACATATTTGCC +
Preference number: 1 (lower is better)
Translates to: DIGRSCPSDSLEGHF*LRPVPQPKATHIFA
Trigger: GGCAAATATGTGGGTAGCTTTAGGCTGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAGTGAATCCGAAGGGCATGATCTTCCTATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp ATGGCACCTCCTTTTTCCCATCACAAATCCTTGTCACTGTATGAGTaGGGCCGCTGGTGCCTCCCAAGCCTGTGTGTTTATTACCACAGC +
Preference number: 1 (lower is better)
Translates to: MAPPFSHHKSLSLYE*GRWCLPSLCVYYHS
Trigger: GCTGTGGTAATAAACACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATACAGTGACAAGGATTTGTGATGGGAAAAAGGAGGTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp ACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATaGCCTTCGGATTCACTCGAAGGGCATTTTTGCCTGAGGCCCGTG +
Preference number: 1 (lower is better)
Translates to: TSNDSSCLVKDIGRS*PSDSLEGHFCLRPV
Trigger: CACGGGCCTCAGGCAAAAATGCCCTTCGAGTGAATCCGAAGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 90 bp AAACATGGCACCTCCTTTTTCCCATCACAAATCCTTGTCACTGTATaGGTGGGGCCGCTGGTGCCTCCCAAGCCTGTGTGTTTATTACCA +
Preference number: 1 (lower is better)
Translates to: KHGTSFFPSQILVTV*VGPLVPPKPVCLLP
Trigger: TGGTAATAAACACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATACAGTGACAAGGATTTGTGATGGGAAAAAGGAGGTGCCATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 90 bp TTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCCTaGGGTTCTGTAGGCTCTCCAAGGGGTGAGCTTCAAAGGATCATA +
Preference number: 1 (lower is better)
Translates to: FASFWAVWQSSKLSA*GSVGSPRGELQRII
Trigger: TATGATCCTTTGAAGCTCACCCCTTGGAGAGCCTACAGAACCTCAGGCTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp AGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCC +
Preference number: 1 (lower is better)
Translates to: RQSTFWGFNQVPHGL*MNVSRRLWLSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR CCA 90 bp TGGGGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTATTTCTTGCCATaGACCACACACTCATGCCTTCAGGAGTATATGTGCAAGATTCTT +
Preference number: 1 (lower is better)
Translates to: WGFGSWKAAFSYFLP*TTHSCLQEYMCKIL
Trigger: AAGAATCTTGCACATATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 90 bp CATTTTGCAAGTCTTCCACCTGCCTTCAGAATTGAGGCTGTAACATaGATTTGGCTGAGGCCGCGAAACATCCAAACCCACACCTATTTC +
Preference number: 1 (lower is better)
Translates to: HFASLPPAFRIEAVT*IWLRPRNIQTHTYF
Trigger: GAAATAGGTGTGGGTTTGGATGTTTCGCGGCCTCAGCCAAATTCATGTTACAGCCTCAATTCTGAAGGCAGGTGGAAGACTTGCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp CTGAAAACATCATGGGCATGGTTCCCAAAGATGCATGCAATTCAATaGAGCCTTAGCATGGCATTGCTGATGGGAGAAACTCCATCTGCT +
Preference number: 1 (lower is better)
Translates to: LKTSWAWFPKMHAIQ*SLSMALLMGETPSA
Trigger: AGCAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCTGCATTGAATTGCATGCATCTTTGGGAACCATGCCCATGATGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp TTAAATGGGGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTATTTCTTaGCATGGACCACACACTCATGCCTTCAGGAGTATATGTGCAAGA +
Preference number: 1 (lower is better)
Translates to: LNGALGPGKQPLAIS*HGPHTHAFRSICAR
Trigger: TCTTGCACATATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp CTAGAACACTTCTCTGGTTCTTGCATTAAATGGGGCTTTGGGTCCTaGAAAGCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCA +
Preference number: 1 (lower is better)
Translates to: LEHFSGSCIKWGFGS*KAAFSYFLPWTTHS
Trigger: TGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACCAGAGAAGTGTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp CGGTCCCAGGAAGGTGAATCTGCTTCACACATAGTATTTCTTCCATaGACCCGCACCCTCCACCTTCTCTTTATACCTGTATTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: RSQEGESASHIVFLP*TRTLHLLFIPVFRK
Trigger: TTTTCTAAATACAGGTATAAAGAGAAGGTGGAGGGTGCGGGTGCATGGAAGAAATACTATGTGTGAAGCAGATTCACCTTCCTGGGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp TTGTCCACTAATGGCCTAGAACACTTCTCTGGTTCTTGCATTAAATaGGGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTATTTCTTGCCA +
Preference number: 1 (lower is better)
Translates to: LSTNGLEHFSGSCIK*GFGSWKAAFSYFLP
Trigger: TGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACCAGAGAAGTGTTCTAGGCCATTAGTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 90 bp AACATGACATTGTCCACTAATGGCCTAGAACACTTCTCTGGTTCTTaGATTAAATGGGGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTAT +
Preference number: 1 (lower is better)
Translates to: NMTLSTNGLEHFSGS*IKWGFGSWKAAFSY
Trigger: ATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACCAGAGAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp AAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATaGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACA +
Preference number: 1 (lower is better)
Translates to: KQKTVDILGFQSSAT*SLDECLEEIVVEFT
Trigger: TGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR GCA 90 bp CCAAGATTGAAGTCTGAGTTCCTGCTGTCAAGGAGGGTACATGTGTaGCTAAAATCAACTTTCCCTATCTTGCTTAAGATGTTTCCAATG +
Preference number: 1 (lower is better)
Translates to: PRLKSEFLLSRRVHV*LKSTFPILLKMFPM
Trigger: CATTGGAAACATCTTAAGCAAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAACTCAGACTTCAATCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp AACCTAATCTTGGGACTTAGATTTGTACTGAAAACATCATGGGCATaGTTCCCAAAGATGCATGCAATTCAATGCAGCCTTAGCATGGCA +
Preference number: 1 (lower is better)
Translates to: NLILGLRFVLKTSWA*FPKMHAIQCSLSMA
Trigger: TGCCATGCTAAGGCTGCATTGAATTGCATGCATCTTTGGGAACCATGCCCATGATGTTTTCAGTACAAATCTAAGTCCCAAGATTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp CTTTCCAACCTAATCTTGGGACTTAGATTTGTACTGAAAACATCATaGGCATGGTTCCCAAAGATGCATGCAATTCAATGCAGCCTTAGC +
Preference number: 1 (lower is better)
Translates to: LSNLILGLRFVLKTS*AWFPKMHAIQCSLS
Trigger: GCTAAGGCTGCATTGAATTGCATGCATCTTTGGGAACCATGCCCATGATGTTTTCAGTACAAATCTAAGTCCCAAGATTAGGTTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 90 bp AGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCG +
Preference number: 1 (lower is better)
Translates to: SKPLIKSLNKRQSTF*GFNQVPHGLWMNVS
Trigger: CGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACGAGTGGGGCCGCTGGTaGCTCCCAAGCCTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHEWGRW*LPSLCV
Trigger: AACACACAGGCTTGGGAGGCACCAGCGGCCCCACTC...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAATTGTCACTGTATGAGTaGGGCCGCTGGTGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQLSLYE*GRWCLP
Trigger: TGGGAGGCACCAGCGGCCCCACTCATACAGTGACAA...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACATCCTTGTCACTGTATaGGTGGGGCCGCTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHILVTV*VGPLVP
Trigger: AGGCACCAGCGGCCCCACTCATACAGTGACAAGGAT...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGAGAGGAATGCCCGTGTaGCTAGATGTGGGGCTATGG +
Preference number: 2 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPRGMPV*LDVGLW
Trigger: CCATAGCCCCACATCTAGTCACACGGGCATTCCTCT...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCTGGATGGTCTGCTGTaGTTTAAAATCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHLDGLL*FKIPCP
Trigger: GGGGCAGGGGATTTTAAATCACAGCAGACCATCCAG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGAGAGGGAGGGGCTGTaGAAAAACCTTTCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQEREGL*KNLSEA
Trigger: AGCTTCTGAAAGGTTTTTCCACAGCCCCTCCCTCTC...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCCGGTTTCACTGGGTTaGGGGAAAACAGACCCTGAT +
Preference number: 2 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHPVSLG*GKTDPD
Trigger: ATCAGGGTCTGTTTTCCCCCAACCCAGTGAAACCGG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp CCTGCATTTCCAAACATGGCACCTCCTTTTTCCCATCACAAATCCTaGTCACTGTATGAGTGGGGCCGCTGGTGCCTCCCAAGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: PAFPNMAPPFSHHKS*SLYEWGRWCLPSLC
Trigger: ACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATACAGTGACAAGGATTTGTGATGGGAAAAAGGAGGTGCCATGTTTGGAAATGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGAGTCTCCTCTATTTTaGGGGCTGAGATATTCCAGA +
Preference number: 2 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPESPLF*GLRYSR
Trigger: TCTGGAATATCTCAGCCCTCAAAATAGAGGAGACTC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 2 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 2 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 2 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCACCTGCCTTCAGAATTaGGGCTGTAACATGAATTTG +
Preference number: 2 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPTCLQN*GCNMNL
Trigger: CAAATTCATGTTACAGCCTCAATTCTGAAGGCAGGT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGATGTTCAGATCAGATaGTACAGGATTCCACTGGAT +
Preference number: 2 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPDVQIR*YRIPLD
Trigger: ATCCAGTGGAATCCTGTATCATCTGATCTGAACATC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGATACAGGATTCCACTaGATGGTCTGCTGTGATTTA +
Preference number: 2 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPDTGFH*MVCCDL
Trigger: TAAATCACAGCAGACCATCCAGTGGAATCCTGTATC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTATGAGTGGGGCCGCTaGTGCCTCCCAAGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: RNARVTRCGAMESFLNEIYEWGR*CLPSLC
Trigger: ACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp ACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCTGTTaGGCAGTCTTCAAAGCTATCAGCCTGAGGTTCTGTAGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: TTLLIMQMLCFLLGC*AVFKAISLRFCRLS
Trigger: GGAGAGCCTACAGAACCTCAGGCTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTCCTTCAGAAGAACCGTaGGAGGGAGGGGCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSPSEEP*EGGAVE
Trigger: TTCCACAGCCCCTCCCTCTCACGGTTCTTCTGAAGG...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGGAATCCTTTCTGAATaGAATTCCTCTCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQGILSE*NSSLCL
Trigger: AAGACAGAGAGAGGAATTTCATTCAGAAAGGATTCC...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGTACTGAAAACATCATaGGCATGGTTCCCAAAGATG +
Preference number: 2 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPVLKTS*AWFPKM
Trigger: CATCTTTGGGAACCATGCCCATGATGTTTTCAGTAC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp AGCCTTAGCATGGCATTGCTGATGGGAGAAACTCCATCTGCTGTTTaGTGTTTTTGCTGCCGCGGTTTGCCATTTTGCAAGTCTTCCACC +
Preference number: 2 (lower is better)
Translates to: SLSMALLMGETPSAV*CFCCRGLPFCKSST
Trigger: GGTGGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCCCAAGATTGAAGTCTaGGTTCCTGCTGTCAAGGAG +
Preference number: 2 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYPKIEV*VPAVKE
Trigger: CTCCTTGACAGCAGGAACTCAGACTTCAATCTTGGG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATTTAGCATGGCATTGCTaGTGGGAGAAACTCCATCTG +
Preference number: 2 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYLAWHC*WEKLHL
Trigger: CAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAA...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACACGCTCTTTCATCATTaGAAGAGTGTCAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHTLFHH*KSVKEK
Trigger: CTTTTCTTTGACACTCTTTCAATGATGAAAGAGCGT...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: YADALLPSGLFGSLQSYQVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCGTACTGAAAACATCATaGGCATGGTTCCCAAAGATG +
Preference number: 2 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSVLKTS*AWFPKM
Trigger: CATCTTTGGGAACCATGCCCATGATGTTTTCAGTAC...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp ATTAAATGGGGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTATTTCTaGCCATGGACCACACACTCATGCCTTCAGGAGTATATGTGCAAG +
Preference number: 2 (lower is better)
Translates to: IKWGFGSWKAAFSYF*PWTTHSCLQEYMCK
Trigger: CTTGCACATATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCATTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTATTGAGGCTGTAACATaGATTTGGCTGAGGCCGCGA +
Preference number: 2 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLIEAVT*IWLRPR
Trigger: TCGCGGCCTCAGCCAAATTCATGTTACAGCCTCAAT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTCATGGTTCCCAAAGATaGATGCAATTCAATGCAGCC +
Preference number: 2 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPHGSQR*MQFNAA
Trigger: GGCTGCATTGAATTGCATGCATCTTTGGGAACCATG...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGAGAGGGAGGGGCTGTaGAAAAACCTTTCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: RNARVTRCGAMESFLNEIEREGL*KNLSEA
Trigger: AGCTTCTGAAAGGTTTTTCCACAGCCCCTCCCTCTC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp TGGTTCCCAAAGATGCATGCAATTCAATGCAGCCTTAGCATGGCATaGCTGATGGGAGAAACTCCATCTGCTGTTTTGTGTTTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: WFPKMHAIQCSLSMA*LMGETPSAVLCFCC
Trigger: GCAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCTGCATTGAATTGCATGCATCTTTGGGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp AGACTCCCTGCTATTCTCCCTATGGCCAGAAAGGTCTTTTCTTGTTaGAAAACCAGCAGACTTGAAACAATTCCAGAGAGAATGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RLPAILPMARKVFSC*KTSRLETIPERMGG
Trigger: CCCTCCCATTCTCTCTGGAATTGTTTCAAGTCTGCTGGTTTTCAAACAAGAAAAGACCTTTCTGGCCATAGGGAGAATAGCAGGGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCTCTATTTTGAGGGCTaGGATATTCCAGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLLYFEG*DIPEPQ
Trigger: CTGGGGTTCTGGAATATCTCAGCCCTCAAAATAGAG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp CCAAATCACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTaGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCCT +
Preference number: 2 (lower is better)
Translates to: PNHYLLYNPPDYADA*LPSGLFGSLQSYQP
Trigger: AGGCTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGTGATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGCTGTTTTGTGTTTTTaGTGCCGCGGTTTGCCATTT +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSAVLCF*CRGLPF
Trigger: AAATGGCAAACCGCGGCAGCAAAAACACAAAACAGC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCCTGAAAAATTGCCTTTaGTCGTTTATCACCTTTCTA +
Preference number: 2 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSLKNCL*SFITFL
Trigger: TAGAAAGGTGATAAACGACCAAAGGCAATTTTTCAG...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTCTGCATTTCCAAACATaGCACCTCCTTTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSLHFQT*HLLFPI
Trigger: GATGGGAAAAAGGAGGTGCCATGTTTGGAAATGCAG...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGGTTCTTGCATTAAATaGGGCTTTGGGTCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSGSCIK*GFGSWK
Trigger: TTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp AAAACCTTTCAGAAGCTGGCAAAATGGGAAGAGAGGACACAGAATTaGTTTAGGAGCACAGCTCTCCAAATGGGTTTAAGTACCCATGCT +
Preference number: 2 (lower is better)
Translates to: KTFQKLAKWEERTQN*FRSTALQMGLSTHA
Trigger: AGCATGGGTACTTAAACCCATTTGGAGAGCTGTGCTCCTAAACAAATTCTGTGTCCTCTCTTCCCATTTTGCCAGCTTCTGAAAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTTTATTACCACAGCTTaGGAGTGGCTTGCTGAACAT +
Preference number: 2 (lower is better)
Translates to: RNARVTRCGAMESFLNEIFITTA*EWLAEH
Trigger: ATGTTCAGCAAGCCACTCTCAAGCTGTGGTAATAAA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTATCTTTCTCCAAACATaGCATTGTCCACTAATGGCC +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSIFLQT*HCPLMA
Trigger: GGCCATTAGTGGACAATGTCATGTTTGGAGAAAGAT...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGGGAGAAACTCCATCTaGTGTTTTGTGTTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: RNARVTRCGAMESFLNEIGRNSI*CFVFLL
Trigger: CAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTAAAACATCATGGGCATaGTTCCCAAAGATGCATGCA +
Preference number: 2 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLKTSWA*FPKMHA
Trigger: TGCATGCATCTTTGGGAACCATGCCCATGATGTTTT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCACCCAATTCTTCATTaGAACTCTCAAATCTCTCAT +
Preference number: 2 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYHPILH*NSQISH
Trigger: ATGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCCAATTCCAGAGAGAATaGGAGGGCACCAAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFQFQRE*EGTKEG
Trigger: ACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAATTG...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp CCAACCCAAACTAAGCCAACAAGAAATACCCTTTCCAACCTAATCTaGGGACTTAGATTTGTACTGAAAACATCATGGGCATGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: PTQTKPTRNTLSNLI*GLRFVLKTSWAWFP
Trigger: TGGGAACCATGCCCATGATGTTTTCAGTACAAATCTAAGTCCCAAGATTAGGTTGGAAAGGGTATTTCTTGTTGGCTTAGTTTGGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGACTTAGATTTGTACTaGAAACATCATGGGCATGGT +
Preference number: 2 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGDLDLY*KHHGHG
Trigger: ACCATGCCCATGATGTTTTCAGTACAAATCTAAGTC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGAAAACCAGCAGACTTaGAACAATTCCAGAGAGAAT +
Preference number: 2 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGENQQT*NNSREN
Trigger: ATTCTCTCTGGAATTGTTTCAAGTCTGCTGGTTTTC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTTTGCTGCCGCGGTTTaGCATTTTGCAAGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFFAAAV*HFASLP
Trigger: TGGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCATAGTATTTCTTCCATaGACCCGCACCCTCCACCTT +
Preference number: 2 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFIVFLP*TRTLHL
Trigger: AAGGTGGAGGGTGCGGGTGCATGGAAGAAATACTAT...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: GKYILKMTPFRESVHLSLRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTACGCTCTTTCATCATTaGAAGAGTGTCAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: RNARVTRCGAMESFLNEITLFHH*KSVKEK
Trigger: CTTTTCTTTGACACTCTTTCAATGATGAAAGAGCGT...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR GCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTTTGTCTCTGAAAAATTaGCTTTGGTCGTTTATCACC +
Preference number: 2 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLLSLKN*LWSFIT
Trigger: GGTGATAAACGACCAAAGGCAATTTTTCAGAGACAA...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp GATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCTCTCATTaGTCTCTGAAAAATTGCCTTTGGTCGTTTATCACCTTTCTAGAA +
Preference number: 2 (lower is better)
Translates to: DPPHPILHWNSQISH*SLKNCLWSFITFLE
Trigger: TTCTAGAAAGGTGATAAACGACCAAAGGCAATTTTTCAGAGACAAATGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR TCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCTCTCTCATTTGTCTCTaGAAAATTGCCTTTGGTCGT +
Preference number: 2 (lower is better)
Translates to: GKYILKMTPFRESVHLSLSLICL*KIAFGR
Trigger: ACGACCAAAGGCAATTTTTCAGAGACAAATGAGAGA...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTTGCAAGATTCTTTTCTaGCAGAAGGAAAATATTCTG +
Preference number: 2 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSCKILF*QKENIL
Trigger: CAGAATATTTTCCTTCTGCCAGAAAAGAATCTTGCA...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 90 bp GAAAGGTTACATTATTTGTGTTGTTATCTTTCTCCAAACATGACATaGTCCACTAATGGCCTAGAACACTTCTCTGGTTCTTGCATTAAA +
Preference number: 2 (lower is better)
Translates to: ERLHYLCCYLSPNMT*STNGLEHFSGSCIK
Trigger: TTTAATGCAAGAACCAGAGAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACACAAATAATGTAACCTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp CAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTaGCTGTCACCACCATGTCACCGGTCCCAGGAAGGT +
Preference number: 3 (lower is better)
Translates to: QMPLCPSVCPSH*LSPPCHRSQEG
Trigger: ACCTTCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 72 bp CAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATaGCACTGTGCCCGTCTGTCTGTCCAAGCCATTGAC +
Preference number: 3 (lower is better)
Translates to: QREWEGTKEGSK*HCARLSVQAID
Trigger: GTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 72 bp AGATCATGCCCTTCGGATTCACTCGAAGGGCATTTTTaGCTGAGGCCCGTGCCTCAGCCTAAAGCTACCCAC +
Preference number: 3 (lower is better)
Translates to: RSCPSDSLEGHF*LRPVPQPKATH
Trigger: GTGGGTAGCTTTAGGCTGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAGTGAATCCGAAGGGCATGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAACTCCATCTGCTGTTTaGTGTTTTTGCTGCCGCGGT +
Preference number: 3 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQTPSAV*CFCCRG
Trigger: ACCGCGGCAGCAAAAACACAAAACAGCAGATGGAGT...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp CATGCCCTTCGGATTCACTCGAAGGGCATTTTTGCCTaGGGCCCGTGCCTCAGCCTAAAGCTACCCACATAT +
Preference number: 3 (lower is better)
Translates to: HALRIHSKGIFA*GPCLSLKLPTY
Trigger: ATATGTGGGTAGCTTTAGGCTGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAGTGAATCCGAAGGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 3 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPNVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCAGCTTGAGAGTGGCTaGCTGAACATGGTGATCGAT +
Preference number: 3 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHQLESG*LNMVID
Trigger: ATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 72 bp CATCACAAATCCTTGTCACTGTATGAGTGGGGCCGCTaGTGCCTCCCAAGCCTGTGTGTTTATTACCACAGC +
Preference number: 3 (lower is better)
Translates to: HHKSLSLYEWGR*CLPSLCVYYHS
Trigger: GCTGTGGTAATAAACACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATACAGTGACAAGGATTTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp TTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCCTaGGGTTCTGTAGGCTCTCCAAGGGGTGAGCTTCAA +
Preference number: 3 (lower is better)
Translates to: FWAVWQSSKLSA*GSVGSPRGELQ
Trigger: TTGAAGCTCACCCCTTGGAGAGCCTACAGAACCTCAGGCTGATAGCTTTGAAGACTGCCAAACAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 72 bp CCTTTTTCCCATCACAAATCCTTGTCACTGTATGAGTaGGGCCGCTGGTGCCTCCCAAGCCTGTGTGTTTAT +
Preference number: 3 (lower is better)
Translates to: PFSHHKSLSLYE*GRWCLPSLCVY
Trigger: ATAAACACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATACAGTGACAAGGATTTGTGATGGGAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp AGTCTTCCACCTGCCTTCAGAATTGAGGCTGTAACATaGATTTGGCTGAGGCCGCGAAACATCCAAACCCAC +
Preference number: 3 (lower is better)
Translates to: SLPPAFRIEAVT*IWLRPRNIQTH
Trigger: GTGGGTTTGGATGTTTCGCGGCCTCAGCCAAATTCATGTTACAGCCTCAATTCTGAAGGCAGGTGGAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 72 bp GACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATaGCCTTCGGATTCACTCGAAGGGCATTTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: DSSCLVKDIGRS*PSDSLEGHFCL
Trigger: CAGGCAAAAATGCCCTTCGAGTGAATCCGAAGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 72 bp GGGTCCTGGAAAGCAGCCTTTAGCTATTTCTTGCCATaGACCACACACTCATGCCTTCAGGAGTATATGTGC +
Preference number: 3 (lower is better)
Translates to: GSWKAAFSYFLP*TTHSCLQEYMC
Trigger: GCACATATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCAGCTTGAGAGTGGCTaGCTGAACATGGTGATCGAT +
Preference number: 3 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYQLESG*LNMVID
Trigger: ATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGGCATTAAATGGGGCTTaGGGTCCTGGAAAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: YADALLPSGLFGSLQSYQALNGA*GPGKQP
Trigger: AGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGC...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp GAATCAGTGCACTTGAGTCTCCTCTATTTTGAGGGCTaGGATATTCCAGAACCCCAGGAGAAACCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: ESVHLSLLYFEG*DIPEPQEKPEL
Trigger: GAGCTCTGGTTTCTCCTGGGGTTCTGGAATATCTCAGCCCTCAAAATAGAGGAGACTCAAGTGCACTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 72 bp TTGTCCACTAATGGCCTAGAACACTTCTCTGGTTCTTaGATTAAATGGGGCTTTGGGTCCTGGAAAGCAGCC +
Preference number: 3 (lower is better)
Translates to: LSTNGLEHFSGS*IKWGFGSWKAA
Trigger: GGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACCAGAGAAGTGTTCTAGGCCATTAGTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTTGCTGTTTTGTGTTTTaGCTGCCGCGGTTTGCCATT +
Preference number: 3 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPCCFVF*LPRFAI
Trigger: AATGGCAAACCGCGGCAGCAAAAACACAAAACAGCA...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTTTGTCTCTGAAAAATaGCCTTTGGTCGTTTATCAC +
Preference number: 3 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPFVSEK*PLVVYH
Trigger: GTGATAAACGACCAAAGGCAATTTTTCAGAGACAAA...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGGCTGTAACATGAATTaGGCTGAGGCCGCGAAACAT +
Preference number: 3 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGGCNMN*AEAAKH
Trigger: ATGTTTCGCGGCCTCAGCCAAATTCATGTTACAGCC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCCCGCGGTTTGCCATTTaGCAAGTCTTCCACCTGCCT +
Preference number: 3 (lower is better)
Translates to: GKYILKMTPFRESVHLSLPRFAI*QVFHLP
Trigger: AGGCAGGTGGAAGACTTGCAAAATGGCAAACCGCGG...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCAGCCTTAGCATGGCATaGCTGATGGGAGAAACTCCA +
Preference number: 3 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGSLSMA*LMGETP
Trigger: TGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACCGCGGTTTGCCATTTaGCAAGTCTTCCACCTGCCT +
Preference number: 3 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRPRFAI*QVFHLP
Trigger: AGGCAGGTGGAAGACTTGCAAAATGGCAAACCGCGG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp GTTTATATAACACCTTTGCTACCTTCAGAAGAACCGTaGGAGGGAGGGGCTGTGGAAAAACCTTTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: VYITPLLPSEEP*EGGAVEKPFRS
Trigger: GCTTCTGAAAGGTTTTTCCACAGCCCCTCCCTCTCACGGTTCTTCTGAAGGTAGCAAAGGTGTTATATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 72 bp AATGGCCTAGAACACTTCTCTGGTTCTTGCATTAAATaGGGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTAT +
Preference number: 3 (lower is better)
Translates to: NGLEHFSGSCIK*GFGSWKAAFSY
Trigger: ATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACCAGAGAAGTGTTCTAGGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: DKESKQKTVDILGFQSSASRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: KESKQKTVDILGFQSSATSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 3 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGNVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTGTTTATATAACACCTTaGCTACCTTCAGAAGAACCG +
Preference number: 3 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPVYITP*LPSEEP
Trigger: CGGTTCTTCTGAAGGTAGCAAAGGTGTTATATAAAC...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGTCACCCAATTCTTCATaGGAACTCTCAAATCTCTCA +
Preference number: 3 (lower is better)
Translates to: YADALLPSGLFGSLQSYQSPNSS*ELSNLS
Trigger: TGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTGA...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp CAGAAAGGTCTTTTCTTGTTTGAAAACCAGCAGACTTaGAACAATTCCAGAGAGAATGGGAGGGCACCAAAG +
Preference number: 3 (lower is better)
Translates to: QKGLFLFENQQT*NNSRENGRAPK
Trigger: CTTTGGTGCCCTCCCATTCTCTCTGGAATTGTTTCAAGTCTGCTGGTTTTCAAACAAGAAAAGACCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR GCA 72 bp AAGTCTGAGTTCCTGCTGTCAAGGAGGGTACATGTGTaGCTAAAATCAACTTTCCCTATCTTGCTTAAGATG +
Preference number: 3 (lower is better)
Translates to: KSEFLLSRRVHV*LKSTFPILLKM
Trigger: CATCTTAAGCAAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAACTCAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCCTTTCCAACCTAATCTaGGGACTTAGATTTGTACTG +
Preference number: 3 (lower is better)
Translates to: IPLPNDPPHPILHWNSQILSNLI*GLRFVL
Trigger: CAGTACAAATCTAAGTCCCAAGATTAGGTTGGAAAG...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CCA 72 bp TTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCACATGGTCTCTGGATG +
Preference number: 3 (lower is better)
Translates to: LIKSLNKRQSTF*GFNQVPHGLWM
Trigger: CATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCTCTGAAAAATTGCCTTaGGTCGTTTATCACCTTTCT +
Preference number: 3 (lower is better)
Translates to: IPLPNDPPHPILHWNSQISEKLP*VVYHLS
Trigger: AGAAAGGTGATAAACGACCAAAGGCAATTTTTCAGA...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR TCA 72 bp ATATTTGCCAAATCACTACTTGTTATACAACCCTCCTaGTTATGCAGATGCTTTGCTTCCTTCTGGGCTGTT +
Preference number: 3 (lower is better)
Translates to: IFAKSLLVIQPS*LCRCFASFWAV
Trigger: AACAGCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGTGATTTGGCAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR-3UTR CAA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTCAACTTTCCCTATCTaGCTTAAGATGTTTCCAATG +
Preference number: 3 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFSTFPI*LKMFPM
Trigger: CATTGGAAACATCTTAAGCAAGATAGGGAAAGTTGA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAATCTCGCTCCAGCGCTaGCGCCGGGCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQISLQR*RRAPQE
Trigger: CTCCTGGGGAGCCCGGCGGCAGCGCTGGAGCGAGAT...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAACTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPRGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCTATGAGTGGGGCCGCTaGTGCCTCCCAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPYEWGR*CLPSLC
Trigger: ACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATA...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHLWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGGCCCTTTCCAAAGATaGGGCCAGCAGGGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPGPFQR*GQQGPN
Trigger: ATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAAGGGCATTTTTGCCTaGGGCCCGTGCCTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPKGIFA*GPCLSL
Trigger: TAGGCTGAGGCACGGGCCTCAGGCAAAAATGCCCTT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPSWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHPVPVG*LSQDAA
Trigger: CGCTGCATCCTGGGACAGCCATCCCACTGGAACGGG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGAAGGAGGGCGGCGGTaGGCGAGAAAGGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALEGGRR*ARKGKR
Trigger: CCGCTTCCCCTTTCTCGCTCACCGCCGCCCTCCTTC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATCTCGCTCCAGCGCTaGCGCCGGGCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLISLQR*RRAPQE
Trigger: CTCCTGGGGAGCCCGGCGGCAGCGCTGGAGCGAGAT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGTGATGTGCAGAGGGTaGGGTCCCATCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPVMCRG*GPIQHQ
Trigger: CTGGTGCTGGATGGGACCGCACCCTCTGCACATCAC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGAGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PVCLSKPLTVTTMSPVPGVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...TCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSMMAGP*SREWPG
Trigger: CCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCAT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRMMAGP*SREWPG
Trigger: CCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCAT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVMMAGP*SREWPG
Trigger: CCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCAT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGAGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVCLSKPLTVTTMSPVPGAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...TCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCCACCAGGAGTGTCTaGTTGGCCAGGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPSTRSV*LARTVR
Trigger: CCTGACCGTCCTGGCCAACCAGACACTCCTGGTGGA...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALEAARA*SDVNSM
Trigger: CATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
3UTR CAA 72 bp CCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATaGACTGTCACCACCATGTCACCGGTCCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PNATVPVCLSKP*TVTTMSPVPGR
Trigger: CCTTCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCCCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCCTGGATGGTCTGCTGTaGTTTAAAATCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPLDGLL*FKIPCP
Trigger: GGGGCAGGGGATTTTAAATCACAGCAGACCATCCAG...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATCTCGCTCCAGCGCTaGCGCCGGGCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCISLQR*RRAPQE
Trigger: CTCCTGGGGAGCCCGGCGGCAGCGCTGGAGCGAGAT...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLMMAGP*SREWPG
Trigger: CCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCAT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAACACCACACATGGCTCTaGACAGGGGCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQHHTWL*TGALCH
Trigger: ATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTG...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGGGGCAAGGCGTGCTTaGGGCGGGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKGARRA*GGPPLE
Trigger: TTCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGGGGCAAGGCGTGCTTaGGGCGGGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLGARRA*GGPPLE
Trigger: TTCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGGGGCAAGGCGTGCTTaGGGCGGGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPGARRA*GGPPLE
Trigger: TTCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGGGGCAAGGCGTGCTTaGGGCGGGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRGARRA*GGPPLE
Trigger: TTCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSEQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLEAARA*SDVNSM
Trigger: CATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPEAARA*SDVNSM
Trigger: CATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAAGGTGTATTGGATGGTaGTCCCCACCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQRCIGW*SPPAAQ
Trigger: CTGTGCTGCTGGTGGGGACCACCATCCAATACACCT...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGGGTTGCAGGTGTATTaGATGGTGGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPGLQVY*MVVPTS
Trigger: GCTGGTGGGGACCACCATCCAATACACCTGCAACCC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR TCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVVGHPT*VQVHHR
Trigger: ACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCAC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRVGHPT*VQVHHR
Trigger: ACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCAC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLVGHPT*VQVHHR
Trigger: ACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCAC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGCGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPRTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACAGAGGAATGCCCGTGTaGCTAGATGTGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHRGMPV*LDVGLW
Trigger: CCATAGCCCCACATCTAGTCACACGGGCATTCCTCT...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGAAGGCTCTCCAAGGGGTaGGCTTCAAAGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: PVCLSKPLTVTTMSPVPGRLSKG*ASKDHS
Trigger: ACTATGATCCTTTGAAGCTCACCCCTTGGAGAGCCT...TCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCCTTTGGACAGTGGCTaGGGAGGTGGCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPPLDSG*GGGLGP
Trigger: AGGCCCAAGGCCACCTCCGCAGCCACTGTCCAAAGG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCGCTGGCTGGGACCCTaGCCTTTGGACAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKRWLGP*PLDSGC
Trigger: GCAGCCACTGTCCAAAGGGCAGGGTCCCAGCCAGCG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGCTGGCTGGGACCCTaGCCTTTGGACAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSRWLGP*PLDSGC
Trigger: GCAGCCACTGTCCAAAGGGCAGGGTCCCAGCCAGCG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVMMAGP*SREWPG
Trigger: CCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCAT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGCACCACACATGGCTCTaGACAGGGGCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPHHTWL*TGALCH
Trigger: ATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTG...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCTGTTCCCAAGGTACTaGCCCAAGATGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHLFPRY*PKMWGM
Trigger: CATGCCCCACATCTTGGGGCAGTACCTTGGGAACAG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCCTGGGACGCTGGCTaGGACCCTGCCCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSPWDAG*DPALWT
Trigger: TGTCCAAAGGGCAGGGTCCCAGCCAGCGTCCCAGGG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWRPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKRPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPEQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGTTTTCAGGGTAACTTaGGGAGAGGACGCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPVFRVT*GEDAAD
Trigger: ATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAAC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQEAARA*SDVNSM
Trigger: CATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTC...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPRGPFQ*DGCPRM
Trigger: CATCCTGGGACAGCCATCCCACTGGAACGGGCCCCT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGAGAGAGGGAGGGGCTGTaGAAAAACCTTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PVCLSKPLTVTTMSPVPGEREGL*KNLSEA
Trigger: AGCTTCTGAAAGGTTTTTCCACAGCCCCTCCCTCTC...TCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGAAGGAGGGCGGCGGTaGGCGAGAAAGGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSEGGRR*ARKGKR
Trigger: CCGCTTCCCCTTTCTCGCTCACCGCCGCCCTCCTTC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGAGGGCTGGGATGTCGTaGTGTGCAGAGGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKRAGMS*CAEGAV
Trigger: GACCGCACCCTCTGCACATCACGACATCCCAGCCCT...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPLWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLVGHPT*VQVHHR
Trigger: ACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCAC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFLQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCATTAAGCGGGTCGAGTaGTCCACCTCTCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFIKRVE*STSPGS
Trigger: CGACCCCGGAGAGGTGGATCACTCGACCCGCTTAAT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCATTAAGCGGGTCGAGTaGTCCACCTCTCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPIKRVE*STSPGS
Trigger: CGACCCCGGAGAGGTGGATCACTCGACCCGCTTAAT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACTGGTCACTTCACCCATaGGCTCAAAGCCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHWSLHP*AQSLRS
Trigger: GCTACGAAGGCTTTGAGCTCATGGGTGAAGTGACCA...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCTTAGCATGGCATTGCTaGTGGGAGAAACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPLAWHC*WEKLHL
Trigger: CAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAA...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGCTGGATGGTCTGCTGTaGTTTAAAATCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPLDGLL*FKIPCP
Trigger: GGGGCAGGGGATTTTAAATCACAGCAGACCATCCAG...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCTGGGATGTCGTGATGTaGAGAGGGTGCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSWDVVM*RGCGPI
Trigger: GATGGGACCGCACCCTCTGCACATCACGACATCCCA...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGCTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCCTTTGGACAGTGGCTaGGGAGGTGGCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLPLDSG*GGGLGP
Trigger: AGGCCCAAGGCCACCTCCGCAGCCACTGTCCAAAGG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCTTTGGACAGTGGCTaGGGAGGTGGCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLPLDSG*GGGLGP
Trigger: AGGCCCAAGGCCACCTCCGCAGCCACTGTCCAAAGG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCTTTGGACAGTGGCTaGGGAGGTGGCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSPLDSG*GGGLGP
Trigger: AGGCCCAAGGCCACCTCCGCAGCCACTGTCCAAAGG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCGCTGGCTGGGACCCTaGCCTTTGGACAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCRWLGP*PLDSGC
Trigger: GCAGCCACTGTCCAAAGGGCAGGGTCCCAGCCAGCG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCGCTGGCTGGGACCCTaGCCTTTGGACAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLRWLGP*PLDSGC
Trigger: GCAGCCACTGTCCAAAGGGCAGGGTCCCAGCCAGCG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGGGCTTCGGATTACCTaGCCCTCCACCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALGLRIT*PSTRSV
Trigger: GACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSRWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGAGTGGGGCCGCTGGTaGCTCCCAAGCCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRREWGRW*LPSLCV
Trigger: AACACACAGGCTTGGGAGGCACCAGCGGCCCCACTC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCATAGTATTTCTTCCATaGACCCGCACCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPIVFLP*TRTLHL
Trigger: AAGGTGGAGGGTGCGGGTGCATGGAAGAAATACTAT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGGGCAAGGCGTGCTTaGGGCGGGCCTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGARRA*GGPPLE
Trigger: TTCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCTGCGGAGGTGGCCTTaGGCCTCAGCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLLRRWP*ASAASW
Trigger: CCAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGGACCCTGCCCTTTaGACAGTGGCTGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLWDPAL*TVAAEV
Trigger: CACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCA...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGGACCCTGCCCTTTaGACAGTGGCTGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSWDPAL*TVAAEV
Trigger: CACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCCCTGGGACGCTGGCTaGGACCCTGCCCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCPWDAG*DPALWT
Trigger: TGTCCAAAGGGCAGGGTCCCAGCCAGCGTCCCAGGG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCCCTGGGACGCTGGCTaGGACCCTGCCCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLPWDAG*DPALWT
Trigger: TGTCCAAAGGGCAGGGTCCCAGCCAGCGTCCCAGGG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSRRSRP*DAGWDP
Trigger: AGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCTGTCCATCAGGGCCATaGGGCTGGTGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPCPSGP*GWCPPG
Trigger: CCCAGGAGGACACCAGCCCCATGGCCCTGATGGACA...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTGTCCATCAGGGCCATaGGGCTGGTGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSCPSGP*GWCPPG
Trigger: CCCAGGAGGACACCAGCCCCATGGCCCTGATGGACA...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGTCCATCAGGGCCATaGGGCTGGTGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSCPSGP*GWCPPG
Trigger: CCCAGGAGGACACCAGCCCCATGGCCCTGATGGACA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGTCCATCAGGGCCATaGGGCTGGTGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLCPSGP*GWCPPG
Trigger: CCCAGGAGGACACCAGCCCCATGGCCCTGATGGACA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSRPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCCACCAGGAGTGTCTaGTTGGCCAGGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFSTRSV*LARTVR
Trigger: CCTGACCGTCCTGGCCAACCAGACACTCCTGGTGGA...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRREQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVEQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLEQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVERGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSRGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGEAARA*SDVNSM
Trigger: CATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGCCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCACTCCGTGTGAGAAGTaGTTTTCCAGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPTPCEK*FSSHSG
Trigger: TCCAGAATGGCTGGAAAACCACTTCTCACACGGAGT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPGETSR*ESLFHG
Trigger: GCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCCTCCGAAACGCAGTaGGGCAGGCGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSSSETQ*GRRDVQ
Trigger: CTGGACGTCTCGCCTGCCCCACTGCGTTTCGGAGGA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCTCCTCCGAAACGCAGTaGGGCAGGCGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVSSETQ*GRRDVQ
Trigger: CTGGACGTCTCGCCTGCCCCACTGCGTTTCGGAGGA...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLPVPVG*LSQDAA
Trigger: CGCTGCATCCTGGGACAGCCATCCCACTGGAACGGG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSPVPVG*LSQDAA
Trigger: CGCTGCATCCTGGGACAGCCATCCCACTGGAACGGG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPPVPVG*LSQDAA
Trigger: CGCTGCATCCTGGGACAGCCATCCCACTGGAACGGG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPRGPFQ*DGCPRM
Trigger: CATCCTGGGACAGCCATCCCACTGGAACGGGCCCCT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWRGPFQ*DGCPRM
Trigger: CATCCTGGGACAGCCATCCCACTGGAACGGGCCCCT...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRGPFQ*DGCPRM
Trigger: CATCCTGGGACAGCCATCCCACTGGAACGGGCCCCT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCTGCTTTGCTTCCTTCTaGGCTGTTTGGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPCFASF*AVWQSS
Trigger: TGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCA...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 72 bp CCAAACATGGCACCTCCTTTTTCCCATCACAAATCCTaGTCACTGTATGAGTGGGGCCGCTGGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PNMAPPFSHHKS*SLYEWGRWCLP
Trigger: TGGGAGGCACCAGCGGCCCCACTCATACAGTGACAAGGATTTGTGATGGGAAAAAGGAGGTGCCATGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTAGGGCTGGGATGTCGTaGTGTGCAGAGGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVARAGMS*CAEGAV
Trigger: GACCGCACCCTCTGCACATCACGACATCCCAGCCCT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCLWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVALWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYLQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLLQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSLQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVLQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGGCCCTTTCCAAAGATaGGGCCAGCAGGGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALGPFQR*GQQGPN
Trigger: ATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGTCCCACTGGCAGGTaGGGGTGTCACTCCCCACGA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGPTGR*GCHSPR
Trigger: TCGTGGGGAGTGACACCCTCACCTGCCAGTGGGACC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTATTAAGCGGGTCGAGTaGTCCACCTCTCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSIKRVE*STSPGS
Trigger: CGACCCCGGAGAGGTGGATCACTCGACCCGCTTAAT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACGTTCTTCATTCCAGGTaGCCCAGGGTTAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHVLHSR*PRVRVR
Trigger: TCTAACCCTAACCCTGGGTCACCTGGAATGAAGAAC...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCAAGGGCATTTTTGCCTaGGGCCCGTGCCTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPKGIFA*GPCLSL
Trigger: TAGGCTGAGGCACGGGCCTCAGGCAAAAATGCCCTT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACGCTGGCTGGGACCCTaGCCTTTGGACAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVRWLGP*PLDSGC
Trigger: GCAGCCACTGTCCAAAGGGCAGGGTCCCAGCCAGCG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFTAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGGGCTTCGGATTACCTaGCCCTCCACCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLGLRIT*PSTRSV
Trigger: GACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGGGCTTCGGATTACCTaGCCCTCCACCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEGLRIT*PSTRSV
Trigger: GACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGGGCTTCGGATTACCTaGCCCTCCACCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSGLRIT*PSTRSV
Trigger: GACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFSWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALSWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPSWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSRWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCCCTGGGTTGTCACATaGCAGGGACTCCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPPWVVT*QGLLRN
Trigger: GTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCCCTGGGTTGTCACATaGCAGGGACTCCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFPWVVT*QGLLRN
Trigger: GTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGCTGTTTTGTGTTTTTaGTGCCGCGGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPAVLCF*CRGLPF
Trigger: AAATGGCAAACCGCGGCAGCAAAAACACAAAACAGC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCCCTGCCCCTGTTCTCTaGACCTCCTCAGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSPAPVL*TSSVSI
Trigger: AATGCTGACTGAGGAGGTGCAGAGAACAGGGGCAGG...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTGGGACCCTGCCCTTTaGACAGTGGCTGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSWDPAL*TVAAEV
Trigger: CACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTGTCCATCAGGGCCATaGGGCTGGTGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSCPSGP*GWCPPG
Trigger: CCCAGGAGGACACCAGCCCCATGGCCCTGATGGACA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTGTCCATCAGGGCCATaGGGCTGGTGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVACPSGP*GWCPPG
Trigger: CCCAGGAGGACACCAGCCCCATGGCCCTGATGGACA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTCCACCAGGAGTGTCTaGTTGGCCAGGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSSTRSV*LARTVR
Trigger: CCTGACCGTCCTGGCCAACCAGACACTCCTGGTGGA...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFRRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSEQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGAGCAGATGGGCTCCTaGCTGCTCCAGTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCEQMGS*LLQCGL
Trigger: CAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTC...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLRGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCAGGTGTATTGGATGGTaGTCCCCACCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSRCIGW*SPPAAQ
Trigger: CTGTGCTGCTGGTGGGGACCACCATCCAATACACCT...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGGGTTGCAGGTGTATTaGATGGTGGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALGLQVY*MVVPTS
Trigger: GCTGGTGGGGACCACCATCCAATACACCTGCAACCC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSGETSR*ESLFHG
Trigger: GCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPGETSR*ESLFHG
Trigger: GCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCC...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTCCTCCGAAACGCAGTaGGGCAGGCGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCSSETQ*GRRDVQ
Trigger: CTGGACGTCTCGCCTGCCCCACTGCGTTTCGGAGGA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTCCTCCGAAACGCAGTaGGGCAGGCGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSSSETQ*GRRDVQ
Trigger: CTGGACGTCTCGCCTGCCCCACTGCGTTTCGGAGGA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAPVPVG*LSQDAA
Trigger: CGCTGCATCCTGGGACAGCCATCCCACTGGAACGGG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATTATGAGTGGGGCCGCTaGTGCCTCCCAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYYEWGR*CLPSLC
Trigger: ACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATA...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGCTTCTGAAACGCAGTaGGGCAGGCGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLASETQ*GRRDVQ
Trigger: CTGGACGTCTCGCCTGCCCCACTGCGTTTCAGAAGC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403121.5
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVLWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCAGGTCCATCACCGTaGCATCCCCAGAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVAGPSP*HPQSQA
Trigger: GGCCTGACTCTGGGGATGTCACGGTGATGGACCTGC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCCCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACCCTCCACAAGGAGCTaGGCAGATGGGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVPSTRS*ADGLLA
Trigger: AGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTGGTCTGCCCGCTGTaGACCGTCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKLVCPL*TVILSL
Trigger: CAAGGACAGGATGACGGTTCACAGCGGGCAGACCAA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVALQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGGCCCTTTCCAAAGATaGGGCCAGCAGGGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPGPFQR*GQQGPN
Trigger: ATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGGCCCTTTCCAAAGATaGGGCCAGCAGGGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLGPFQR*GQQGPN
Trigger: ATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCTTCAGAAGAACCGTaGGAGGGAGGGGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLPSEEP*EGGAVE
Trigger: TTCCACAGCCCCTCCCTCTCACGGTTCTTCTGAAGG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACCTTCAGAAGAACCGTaGGAGGGAGGGGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSPSEEP*EGGAVE
Trigger: TTCCACAGCCCCTCCCTCTCACGGTTCTTCTGAAGG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGATCCTTGTCACTGTATaGGTGGGGCCGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEILVTV*VGPLVP
Trigger: AGGCACCAGCGGCCCCACTCATACAGTGACAAGGAT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGATCCTTGTCACTGTATaGGTGGGGCCGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLILVTV*VGPLVP
Trigger: AGGCACCAGCGGCCCCACTCATACAGTGACAAGGAT...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCGTCTGTCCAAGCCATTaGCTGTCACCACCATGTCAC +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSVCPSH*LSPPCH
Trigger: GTGACATGGTGGTGACAGTCAATGGCTTGGACAGAC...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAAGGGCATTTTTGCCTaGGGCCCGTGCCTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVKGIFA*GPCLSL
Trigger: TAGGCTGAGGCACGGGCCTCAGGCAAAAATGCCCTT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGGATGTCGTGATGTaGAGAGGGTGCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKWDVVM*RGCGPI
Trigger: GATGGGACCGCACCCTCTGCACATCACGACATCCCA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATGGGATGTCGTGATGTaGAGAGGGTGCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRWDVVM*RGCGPI
Trigger: GATGGGACCGCACCCTCTGCACATCACGACATCCCA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTTGGGATGTCGTGATGTaGAGAGGGTGCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLWDVVM*RGCGPI
Trigger: GATGGGACCGCACCCTCTGCACATCACGACATCCCA...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTGGGATGTCGTGATGTaGAGAGGGTGCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEWDVVM*RGCGPI
Trigger: GATGGGACCGCACCCTCTGCACATCACGACATCCCA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGGATGTCGTGATGTaGAGAGGGTGCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSWDVVM*RGCGPI
Trigger: GATGGGACCGCACCCTCTGCACATCACGACATCCCA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACCTTTGGACAGTGGCTaGGGAGGTGGCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVPLDSG*GGGLGP
Trigger: AGGCCCAAGGCCACCTCCGCAGCCACTGTCCAAAGG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLTAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSTAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGGAGAAGCTCACACTaGAGAGAGCTGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPWRSSH*RELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGGCTTCGGATTACCTaGCCCTCCACCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGLRIT*PSTRSV
Trigger: GACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIRWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCGATGGTGGCATTGTaGACTGCCCCTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSPMVAL*TAPPQG
Trigger: TCCTTGTGGAGGGGCAGTGCACAATGCCACCATCGG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCGATGGTGGCATTGTaGACTGCCCCTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPPMVAL*TAPPQG
Trigger: TCCTTGTGGAGGGGCAGTGCACAATGCCACCATCGG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCACCACACATGGCTCTaGACAGGGGCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALHHTWL*TGALCH
Trigger: ATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCTGTTCCCAAGGTACTaGCCCAAGATGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALLFPRY*PKMWGM
Trigger: CATGCCCCACATCTTGGGGCAGTACCTTGGGAACAG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCTGTTCCCAAGGTACTaGCCCAAGATGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPLFPRY*PKMWGM
Trigger: CATGCCCCACATCTTGGGGCAGTACCTTGGGAACAG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCCTGGGTTGTCACATaGCAGGGACTCCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSPWVVT*QGLLRN
Trigger: GTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCCCTGGGTTGTCACATaGCAGGGACTCCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKPWVVT*QGLLRN
Trigger: GTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGAGTGGGGCCGCTGGTaGCTCCCAAGCCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSEWGRW*LPSLCV
Trigger: AACACACAGGCTTGGGAGGCACCAGCGGCCCCACTC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCTCGAAGGGCATTTTTaGCTGAGGCCCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYLEGHF*LRPVPQ
Trigger: CTGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCTCAAATGACTCGTCATaGCTAGTCAAGGACATAGGA +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPSNDSS*LVKDIG
Trigger: TCCTATGTCCTTGACTAGGCATGACGAGTCATTTGA...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTTGGGACCCTGCCCTTTaGACAGTGGCTGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSWDPAL*TVAAEV
Trigger: CACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCA...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATGGGACCCTGCCCTTTaGACAGTGGCTGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVWDPAL*TVAAEV
Trigger: CACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGGGCCAGGCTTCTCCGTaGAGGAGGAGAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWGQASP*RRRGDL
Trigger: TAGATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCC...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGGCCAGGCTTCTCCGTaGAGGAGGAGAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPGQASP*RRRGDL
Trigger: TAGATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGGCCAGGCTTCTCCGTaGAGGAGGAGAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLGQASP*RRRGDL
Trigger: TAGATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGPRRPR*GPGPPV
Trigger: CACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGTCCACCAGGAGTGTCTaGTTGGCCAGGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQSTRSV*LARTVR
Trigger: CCTGACCGTCCTGGCCAACCAGACACTCCTGGTGGA...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPRRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLRGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGAGGACGCGGCCGATaGTGGCATTGTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRGRGR*WHCALP
Trigger: GGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALEELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTGTGTCATTCCAGTATaGGTCCCGCACATTGATGCA +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPCVIPV*VPHIDA
Trigger: TGCATCAATGTGCGGGACCCATACTGGAATGACACA...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTTACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAGGTGTATTGGATGGTaGTCCCCACCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRCIGW*SPPAAQ
Trigger: CTGTGCTGCTGGTGGGGACCACCATCCAATACACCT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGCAGGTGTATTGGATaGTGGTCCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPCRCIG*WSPPAA
Trigger: TGCTGCTGGTGGGGACCACCATCCAATACACCTGCA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGGTTGCAGGTGTATTaGATGGTGGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGLQVY*MVVPTS
Trigger: GCTGGTGGGGACCACCATCCAATACACCTGCAACCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLGETSR*ESLFHG
Trigger: GCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAGETSR*ESLFHG
Trigger: GCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGETSR*ESLFHG
Trigger: GCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFGEGLS*QVESLV
Trigger: TACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLRGPFQ*DGCPRM
Trigger: CATCCTGGGACAGCCATCCCACTGGAACGGGCCCCT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGTATGAGTGGGGCCGCTaGTGCCTCCCAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQYEWGR*CLPSLC
Trigger: ACACAGGCTTGGGAGGCACCAGCGGCCCCACTCATA...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTGTCACTGTATGAGTaGGGCCGCTGGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKLSLYE*GRWCLP
Trigger: TGGGAGGCACCAGCGGCCCCACTCATACAGTGACAA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPTPESC*GAAVGS
Trigger: ACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPSCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFSCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTTGGTCTGCCCGCTGTaGACCGTCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCLVCPL*TVILSL
Trigger: CAAGGACAGGATGACGGTTCACAGCGGGCAGACCAA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGGCCCTTTCCAAAGATaGGGCCAGCAGGGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCGPFQR*GQQGPN
Trigger: ATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCC...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVERTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKRTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSRTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTATTAAGCGGGTCGAGTaGTCCACCTCTCCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIIKRVE*STSPGS
Trigger: CGACCCCGGAGAGGTGGATCACTCGACCCGCTTAAT...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGACTTAGATTTGTACTaGAAACATCATGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPDLDLY*KHHGHG
Trigger: ACCATGCCCATGATGTTTTCAGTACAAATCTAAGTC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGAGGAATGCCCGTGTaGCTAGATGTGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSRGMPV*LDVGLW
Trigger: CCATAGCCCCACATCTAGTCACACGGGCATTCCTCT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLTAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTGGAGAAGCTCACACTaGAGAGAGCTGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEWRSSH*RELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTTGGAGAAGCTCACACTaGAGAGAGCTGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSWRSSH*RELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCA...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGGAGAAGCTCACACTaGAGAGAGCTGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLWRSSH*RELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGGAGAAGCTCACACTaGAGAGAGCTGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSWRSSH*RELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCSWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSSWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCCGATGGTGGCATTGTaGACTGCCCCTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQPMVAL*TAPPQG
Trigger: TCCTTGTGGAGGGGCAGTGCACAATGCCACCATCGG...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVNSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSNSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVENSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSMMAGP*SREWPG
Trigger: CCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCAT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACACCACACATGGCTCTaGACAGGGGCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRHHTWL*TGALCH
Trigger: ATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCACCACACATGGCTCTaGACAGGGGCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPHHTWL*TGALCH
Trigger: ATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCACCACACATGGCTCTaGACAGGGGCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLHHTWL*TGALCH
Trigger: ATGACACAGAGCCCCTGTGCAGAGCCATGTGTGGTG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACTGTTCCCAAGGTACTaGCCCAAGATGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRLFPRY*PKMWGM
Trigger: CATGCCCCACATCTTGGGGCAGTACCTTGGGAACAG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGCACAAAACCGGGGTTaGAGGTGTATTGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFAQNRG*RCIGWW
Trigger: CCACCATCCAATACACCTGCAACCCCGGTTTTGTGC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCCCTGGGTTGTCACATaGCAGGGACTCCTCCGAAAC +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQPWVVT*QGLLRN
Trigger: GTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGG...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR GCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCATGGCTGTCCCAGGATaGAGCGGATGGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSMAVPG*SGWSLH
Trigger: GTGAAGTGACCATCCGCTGCATCCTGGGACAGCCAT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATGGCTGTCCCAGGATaGAGCGGATGGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLMAVPG*SGWSLH
Trigger: GTGAAGTGACCATCCGCTGCATCCTGGGACAGCCAT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTATGGCTGTCCCAGGATaGAGCGGATGGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSMAVPG*SGWSLH
Trigger: GTGAAGTGACCATCCGCTGCATCCTGGGACAGCCAT...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCTGCCCCTGTTCTCTaGACCTCCTCAGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLPAPVL*TSSVSI
Trigger: AATGCTGACTGAGGAGGTGCAGAGAACAGGGGCAGG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACCTGCCCCTGTTCTCTaGACCTCCTCAGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSPAPVL*TSSVSI
Trigger: AATGCTGACTGAGGAGGTGCAGAGAACAGGGGCAGG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCTCGAAGGGCATTTTTaGCTGAGGCCCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSLEGHF*LRPVPQ
Trigger: CTGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGCTGCCGCTTCTaGTACTTTACACACGGGCAG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLLCCRF*YFTHGQ
Trigger: CTGCCCGTGTGTAAAGTAGCAGAAGCGGCAGCAGAG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAAGGCAGTTTCTTCTTaGGGGGCAAGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSKAVSS*GARRAW
Trigger: CCAAGCACGCCTTGCCCCCCAAGAAGAAACTGCCTT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGCAGTTTCTTCTTaGGGGGCAAGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLKAVSS*GARRAW
Trigger: CCAAGCACGCCTTGCCCCCCAAGAAGAAACTGCCTT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCAAGGCAGTTTCTTCTTaGGGGGCAAGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSKAVSS*GARRAW
Trigger: CCAAGCACGCCTTGCCCCCCAAGAAGAAACTGCCTT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACACCCTGGGACGCTGGCTaGGACCCTGCCCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATPWDAG*DPALWT
Trigger: TGTCCAAAGGGCAGGGTCCCAGCCAGCGTCCCAGGG...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGGCCAGGCTTCTCCGTaGAGGAGGAGAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLGQASP*RRRGDL
Trigger: TAGATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVRVPR*ARLLRG
Trigger: TCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCAGGCTCCCCGGGTTCTaGCCTCTGGGGGAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLRLPGF*PLGECV
Trigger: CACACACTCCCCCAGAGGCCAGAACCCGGGGAGCCT...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSARPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCRRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVARRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAGACGGAGATGGTGTTaGTGGGGCTTCGGATTACCT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRRRWC*WGFGLP
Trigger: AGGTAATCCGAAGCCCCACCAACACCATCTCCGTCT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGGTTTTCAGGGTAACTTaGGGAGAGGACGCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWVFRVT*GEDAAD
Trigger: ATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAAC...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGTTTTCAGGGTAACTTaGGGAGAGGACGCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLVFRVT*GEDAAD
Trigger: ATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAAC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGTTTTCAGGGTAACTTaGGGAGAGGACGCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLVFRVT*GEDAAD
Trigger: ATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAAC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCTGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPCRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSCRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRCRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKCRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSEELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRREELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEEELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSEELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLEELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAATTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCCTCAGATTCAGGAACTaGATATCTAAGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPLRFRN*ISKKIR
Trigger: ACGGATCTTCTTAGATATCCAGTTCCTGAATCTGAG...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGAGGTGTATTGGATGGTaGTCCCCACCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVERCIGW*SPPAAQ
Trigger: CTGTGCTGCTGGTGGGGACCACCATCCAATACACCT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAGGTGTATTGGATGGTaGTCCCCACCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRCIGW*SPPAAQ
Trigger: CTGTGCTGCTGGTGGGGACCACCATCCAATACACCT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATGCAGGTGTATTGGATaGTGGTCCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSCRCIG*WSPPAA
Trigger: TGCTGCTGGTGGGGACCACCATCCAATACACCTGCA...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATGCAGGTGTATTGGATaGTGGTCCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRCRCIG*WSPPAA
Trigger: TGCTGCTGGTGGGGACCACCATCCAATACACCTGCA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTGCAGGTGTATTGGATaGTGGTCCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVECRCIG*WSPPAA
Trigger: TGCTGCTGGTGGGGACCACCATCCAATACACCTGCA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGGTTGCAGGTGTATTaGATGGTGGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGLQVY*MVVPTS
Trigger: GCTGGTGGGGACCACCATCCAATACACCTGCAACCC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGGGTTGCAGGTGTATTaGATGGTGGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLGLQVY*MVVPTS
Trigger: GCTGGTGGGGACCACCATCCAATACACCTGCAACCC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFIFRQP*VVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAAT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLGEGLS*QVESLV
Trigger: TACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKGEGLS*QVESLV
Trigger: TACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGTACTGAAAACATCATaGGCATGGTTCCCAAAGATG +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQVLKTS*AWFPKM
Trigger: CATCTTTGGGAACCATGCCCATGATGTTTTCAGTAC...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCAAAGCTCGTCCGGCTaGCCTCTAAACCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPQSSSG*PLNQLL
Trigger: GAGAAGTTGGTTTAGAGGCCAGCCGGACGAGCTTTG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGAAGGAGGGCGGCGGTaGGCGAGAAAGGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGEGGRR*ARKGKR
Trigger: CCGCTTCCCCTTTCTCGCTCACCGCCGCCCTCCTTC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCCTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSALWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRTPESC*GAAVGS
Trigger: ACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSTPESC*GAAVGS
Trigger: ACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSTPESC*GAAVGS
Trigger: ACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWSCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRSCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATTGGTCTGCCCGCTGTaGACCGTCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVLVCPL*TVILSL
Trigger: CAAGGACAGGATGACGGTTCACAGCGGGCAGACCAA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGGGCCTGGTCGGACGTaGACTCGATGCGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATGPGRT*TRCGWC
Trigger: ACACCATCCGCATCGAGTTCACGTCCGACCAGGCCC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTGGCCCTTTCCAAAGATaGGGCCAGCAGGGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLGPFQR*GQQGPN
Trigger: ATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCC...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATGGTCACTTCACCCATaGGCTCAAAGCCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSWSLHP*AQSLRS
Trigger: GCTACGAAGGCTTTGAGCTCATGGGTGAAGTGACCA...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATGGTCACTTCACCCATaGGCTCAAAGCCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRWSLHP*AQSLRS
Trigger: GCTACGAAGGCTTTGAGCTCATGGGTGAAGTGACCA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGGTCACTTCACCCATaGGCTCAAAGCCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLWSLHP*AQSLRS
Trigger: GCTACGAAGGCTTTGAGCTCATGGGTGAAGTGACCA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCCTTCAGAAGAACCGTaGGAGGGAGGGGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLPSEEP*EGGAVE
Trigger: TTCCACAGCCCCTCCCTCTCACGGTTCTTCTGAAGG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAATCCTTGTCACTGTATaGGTGGGGCCGCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVILVTV*VGPLVP
Trigger: AGGCACCAGCGGCCCCACTCATACAGTGACAAGGAT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGAAAACCAGCAGACTTaGAACAATTCCAGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQENQQT*NNSREN
Trigger: ATTCTCTCTGGAATTGTTTCAAGTCTGCTGGTTTTC...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEITAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQITAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQISWLLQ*GLEALM
Trigger: CATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGA...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCAGATGGGCTCCTGGCTaGTCCAGTGCGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSARWAPG*SSAAWR
Trigger: CCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCT...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACCGATGGTGGCATTGTaGACTGCCCCTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVPMVAL*TAPPQG
Trigger: TCCTTGTGGAGGGGCAGTGCACAATGCCACCATCGG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLNSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSNSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVANSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGCACAAAACCGGGGTTaGAGGTGTATTGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSAQNRG*RCIGWW
Trigger: CCACCATCCAATACACCTGCAACCCCGGTTTTGTGC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGCACAAAACCGGGGTTaGAGGTGTATTGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRAQNRG*RCIGWW
Trigger: CCACCATCCAATACACCTGCAACCCCGGTTTTGTGC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCGAGTGGGGCCGCTGGTaGCTCCCAAGCCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLEWGRW*LPSLCV
Trigger: AACACACAGGCTTGGGAGGCACCAGCGGCCCCACTC...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATACCAGAGCTCACCCCTaGATTTCCAAACATGGCACC +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYTRAHP*ISKHGT
Trigger: GGTGCCATGTTTGGAAATGCAGGGGTGAGCTCTGGT...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTACCAGAGCTCACCCCTaGATTTCCAAACATGGCACC +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPTRAHP*ISKHGT
Trigger: GGTGCCATGTTTGGAAATGCAGGGGTGAGCTCTGGT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTACCAGAGCTCACCCCTaGATTTCCAAACATGGCACC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSTRAHP*ISKHGT
Trigger: GGTGCCATGTTTGGAAATGCAGGGGTGAGCTCTGGT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACAGAGGGTTGAGTGTGTaGATTTTTAAAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHRGLSV*IFKAQG
Trigger: ACCCTGTGCTTTAAAAATGCACACACTCAACCCTCT...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCCCTGGGTTGTCACATaGCAGGGACTCCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLPWVVT*QGLLRF
Trigger: AAAACGGAGGAGTCCCTGGCATGTGACAACCCAGGG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360929.7
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCTCTGCTGCCGCTTCTaGTACTTTACACACGGGCAG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSLCCRF*YFTHGQ
Trigger: CTGCCCGTGTGTAAAGTAGCAGAAGCGGCAGCAGAG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTCCAGCGACGTCTCTaGTGCCGCTTCTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKFQRRL*CRFCYF
Trigger: AAAGTAGCAGAAGCGGCAGCAGAGACGTCGCTGGAA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTTTAGGACCTTCACCTaGTGTCAGACTCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALFRTFT*CQTLRV
Trigger: CACCCTCAGAGTCTGACAGCAGGTGAAGGTCCTAAA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACAGCGACGTCTCTGCTaGCGCTTCTTTACACACGGG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVQRRLC*RFFTHG
Trigger: CCCGTGTGTAAAGAAGCGGCAGCAGAGACGTCGCTG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTCCAGCGACGTCTCTaGTGCCGCTTCTTTACACAC +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRFQRRL*CRFFTH
Trigger: GTGTGTAAAGAAGCGGCAGCAGAGACGTCGCTGGAA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGCCAGGCTTCTCCGTaGAGGAGGAGAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGQASP*RRRGDL
Trigger: TAGATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLHTAES*CLLGGD
Trigger: ATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPCTPQD*RSSHCR
Trigger: TCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCCGTCCACCCCGCGGATaGAGAGCAGTTCCCCATCGG +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFRPPRG*RAVPHR
Trigger: CCGATGGGGAACTGCTCTCCATCCGCGGGGTGGACG...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAGACGGAGATGGTGTTaGTGGGGCTTCGGATTACCT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRRRWC*WGFGLP
Trigger: AGGTAATCCGAAGCCCCACCAACACCATCTCCGTCT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGAGACGGAGATGGTGTTaGTGGGGCTTCGGATTACCT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRRRWC*WGFGLP
Trigger: AGGTAATCCGAAGCCCCACCAACACCATCTCCGTCT...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGTTTTCAGGGTAACTTaGGGAGAGGACGCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAVFRVT*GEDAAD
Trigger: ATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAAC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVACRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATG +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSEAARA*SDVNSM
Trigger: CATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGCTCCCCACCACACATaGCTCTGCACAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATAPHHT*LCTGAL
Trigger: CAGAGCCCCTGTGCAGAGCCATGTGTGGTGGGGAGC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTTACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCCCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGSEWN*MVKSGV
Trigger: CACGCCAGACTTAACCATCCAGTTCCATTCGGACCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEGSEWN*MVKSGV
Trigger: CACGCCAGACTTAACCATCCAGTTCCATTCGGACCC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSGSEWN*MVKSGV
Trigger: CACGCCAGACTTAACCATCCAGTTCCATTCGGACCC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTAGGTGTATTGGATGGTaGTCCCCACCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSRCIGW*SPPAAQ
Trigger: CTGTGCTGCTGGTGGGGACCACCATCCAATACACCT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTGCAGGTGTATTGGATaGTGGTCCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVACRCIG*WSPPAA
Trigger: TGCTGCTGGTGGGGACCACCATCCAATACACCTGCA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGGTTGCAGGTGTATTaGATGGTGGTCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGLQVY*MVVPTS
Trigger: GCTGGTGGGGACCACCATCCAATACACCTGCAACCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVIFRQP*VVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAAT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSIFRQP*VVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAAT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGEGLS*QVESLV
Trigger: TACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACACCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCG +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATPVPVG*LSQDAA
Trigger: CGCTGCATCCTGGGACAGCCATCCCACTGGAACGGG...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCCCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATTGTCACTGTATGAGTaGGGCCGCTGGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVLSLYE*GRWCLP
Trigger: TGGGAGGCACCAGCGGCCCCACTCATACAGTGACAA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCGGTTTCACTGGGTTaGGGGAAAACAGACCCTGAT +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPPVSLG*GKTDPD
Trigger: ATCAGGGTCTGTTTTCCCCCAACCCAGTGAAACCGG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAAAGCTCGTCCGGCTaGCCTCTAAACCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSQSSSG*PLNQLL
Trigger: GAGAAGTTGGTTTAGAGGCCAGCCGGACGAGCTTTG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
3UTR CAA 72 bp GGCTTTGGGTCCTGGAAAGCAGCCTTTAGCTATTTCTaGCCATGGACCACACACTCATGCCTTCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GFGSWKAAFSYF*PWTTHSCLQEY
Trigger: ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCAGAGTTCACCTGCTTaGGCGAAGGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKQSSPA*AKAVSS
Trigger: AGAAGAAACTGCCTTCGCTCAAGCAGGTGAACTCTG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRPKGHF*CLLGGH
Trigger: GTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCTPESC*GAAVGS
Trigger: ACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGT...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVGHPT*VQVHHR
Trigger: ACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGT +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGVGHPT*VQVHHR
Trigger: ACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCAC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTATTGAGGCTGTAACATaGATTTGGCTGAGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPIEAVT*IWLRPR
Trigger: TCGCGGCCTCAGCCAAATTCATGTTACAGCCTCAAT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTTAGCATGGCATTGCTaGTGGGAGAAACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALLAWHC*WEKLHL
Trigger: CAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTAGAGGAATGCCCGTGTaGCTAGATGTGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSRGMPV*LDVGLW
Trigger: CCATAGCCCCACATCTAGTCACACGGGCATTCCTCT...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCCCAAGATTGAAGTCTaGGTTCCTGCTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSPKIEV*VPAVKE
Trigger: CTCCTTGACAGCAGGAACTCAGACTTCAATCTTGGG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACCCAAGATTGAAGTCTaGGTTCCTGCTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSPKIEV*VPAVKE
Trigger: CTCCTTGACAGCAGGAACTCAGACTTCAATCTTGGG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGTTCTTCATTCCAGGTaGCCCAGGGTTAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEVLHSR*PRVRVR
Trigger: TCTAACCCTAACCCTGGGTCACCTGGAATGAAGAAC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTTCAAAGCTATCAGCCTaGGGTTCTGTAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSSKLSA*GSVGSP
Trigger: TGGAGAGCCTACAGAACCTCAGGCTGATAGCTTTGA...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTACCTTTGGGGGTGCTaGACAACTCAAATAATATCT +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPYLWGC*TTQIIS
Trigger: AGATATTATTTGAGTTGTTCAGCACCCCCAAAGGTA...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATCCTTTGGACAGTGGCTaGGGAGGTGGCCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHPLDSG*GGGLGP
Trigger: AGGCCCAAGGCCACCTCCGCAGCCACTGTCCAAAGG...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCGCTGGCTGGGACCCTaGCCTTTGGACAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRWLGP*PLDSGC
Trigger: GCAGCCACTGTCCAAAGGGCAGGGTCCCAGCCAGCG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCGTGAAGGGGGAGATTTaGAGGGGTGCGGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIVKGEI*RGAGVV
Trigger: TACAACACCCGCACCCCTGCAAATCTCCCCCTTCAC...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGGGCTTCGGATTACCTaGCCCTCCACCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAGLRIT*PSTRSV
Trigger: GACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGCCACCCCACCTGAGTaGAGGTCCATCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATATPPE*RSITVT
Trigger: TGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGNSLSK*RCSFWP
Trigger: GGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGCACAAAACCGGGGTTaGAGGTGTATTGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCAQNRG*RCIGWW
Trigger: CCACCATCCAATACACCTGCAACCCCGGTTTTGTGC...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTATGGCTGTCCCAGGATaGAGCGGATGGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLMAVPG*SGWSLH
Trigger: GTGAAGTGACCATCCGCTGCATCCTGGGACAGCCAT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTATGGCTGTCCCAGGATaGAGCGGATGGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIMAVPG*SGWSLH
Trigger: GTGAAGTGACCATCCGCTGCATCCTGGGACAGCCAT...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATTCCAGCGACGTCTCTaGTGCCGCTTCTGCTACTTC +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVFQRRL*CRFCYF
Trigger: GAAGTAGCAGAAGCGGCAGCAGAGACGTCGCTGGAA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248933.11
CDS-3UTR GCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCAAAGAGGGTTCCAAATaGCACTGTGCCCGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSKEGSK*HCARLS
Trigger: AGACAGACGGGCACAGTGGCATTTGGAACCCTCTTT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCCAACTTTCCCTATCTTaGTTAAGATGTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPQLSLS*LRCFQC
Trigger: ACATTGGAAACATCTTAAGCAAGATAGGGAAAGTTG...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGAATTTCCCAGGAGAATaGCTACCTTTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWNFPGE*LPLGVL
Trigger: CAGCACCCCCAAAGGTAGGCATTCTCCTGGGAAATT...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAATTTCCCAGGAGAATaGCTACCTTTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVNFPGE*LPLGVL
Trigger: CAGCACCCCCAAAGGTAGGCATTCTCCTGGGAAATT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAAGGCAGTTTCTTCTTaGGGGGCAAGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIKAVSS*GARRAW
Trigger: CCAAGCACGCCTTGCCCCCCAAGAAGAAACTGCCTT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACCCTGGGACGCTGGCTaGGACCCTGCCCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSPWDAG*DPALWT
Trigger: TGTCCAAAGGGCAGGGTCCCAGCCAGCGTCCCAGGG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGCAGTGGGTAGTCGCTaGAGTCAATGTACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSAVGSR*SQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATCCACCAGGAGTGTCTaGTTGGCCAGGACGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATSTRSV*LARTVR
Trigger: CCTGACCGTCCTGGCCAACCAGACACTCCTGGTGGA...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSGRGRW*HCALPL
Trigger: GAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTTGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLCRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTGTGTCATTCCAGTATaGGTCCCGCACATTGATGCA +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALCVIPV*VPHIDA
Trigger: TGCATCAATGTGCGGGACCCATACTGGAATGACACA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWRRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRRRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSRRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPRRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSEEYSF*GPLFPR
Trigger: CCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSWLSLA*RSTVSG
Trigger: CCCAGAAACTGTACTCCTCCACGCCAGACTTAACCA...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLWLSLA*RSTVSG
Trigger: CCCAGAAACTGTACTCCTCCACGCCAGACTTAACCA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSWLSLA*RSTVSG
Trigger: CCCAGAAACTGTACTCCTCCACGCCAGACTTAACCA...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCCGAATGGAACTGGATaGTTAAGTCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSPNGTG*LSLAWR
Trigger: CCTCCACGCCAGACTTAACCATCCAGTTCCATTCGG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGTTTTCCAGCCATTCTaGATCTCGGGTAAATCCGAG +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFVFQPF*ISGKSE
Trigger: CTCGGATTTACCCGAGATCCAGAATGGCTGGAAAAC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAIFRQP*VVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAAT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQIFRQP*VVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAAT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSGEGLS*QVESLV
Trigger: TACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACC...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRRGPFQ*DGCPRM
Trigger: CATCCTGGGACAGCCATCCCACTGGAACGGGCCCCT...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGTGCCACATGGTCTCTaGATGAATGTCTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEVPHGL*MNVSRR
Trigger: TCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATGAGAGGGAGGGGCTGTaGAAAAACCTTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYEREGL*KNLSEA
Trigger: AGCTTCTGAAAGGTTTTTCCACAGCCCCTCCCTCTC...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGAGAGGGAGGGGCTGTaGAAAAACCTTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSEREGL*KNLSEA
Trigger: AGCTTCTGAAAGGTTTTTCCACAGCCCCTCCCTCTC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCCGGTTTCACTGGGTTaGGGGAAAACAGACCCTGAT +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCPVSLG*GKTDPD
Trigger: ATCAGGGTCTGTTTTCCCCCAACCCAGTGAAACCGG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCCAATTCCAGAGAGAATaGGAGGGCACCAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLQFQRE*EGTKEG
Trigger: ACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAATTG...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCAGCTATTTCTTGCCATaGACCACACACTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSSYFLP*TTHSCL
Trigger: AAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCT...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTGGGGCTTTGGGTCCTaGAAAGCAGCCTTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEWGFGS*KAAFSY
Trigger: ATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCGGTTCTTGCATTAAATaGGGCTTTGGGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSGSCIK*GFGSWK
Trigger: TTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACC...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 72 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLW*SSQVPFSSVAL
Trigger: GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
3UTR CAA 72 bp GTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: VPHGLWMNVSRR*WLSSQVPFSSV
Trigger: TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACTCTGGAAGCAGCGGTaGCAGGGCTGGGATGTCGTG +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSLWKQR*QGWDVV
Trigger: CACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCAGAGTTCACCTGCTTaGGCGAAGGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSQSSPA*AKAVSS
Trigger: AGAAGAAACTGCCTTCGCTCAAGCAGGTGAACTCTG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVSCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTTGGTCTGCCCGCTGTaGACCGTCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSALVCPL*TVILSL
Trigger: CAAGGACAGGATGACGGTTCACAGCGGGCAGACCAA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTGGTCACTTCACCCATaGGCTCAAAGCCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIWSLHP*AQSLRS
Trigger: GCTACGAAGGCTTTGAGCTCATGGGTGAAGTGACCA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCTCTATTTTGAGGGCTaGGATATTCCAGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLLYFEG*DIPEPQ
Trigger: CTGGGGTTCTGGAATATCTCAGCCCTCAAAATAGAG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTATTTTGAGGGCTaGGATATTCCAGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLLYFEG*DIPEPQ
Trigger: CTGGGGTTCTGGAATATCTCAGCCCTCAAAATAGAG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCTGGATGGTCTGCTGTaGTTTAAAATCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLLDGLL*FKIPCP
Trigger: GGGGCAGGGGATTTTAAATCACAGCAGACCATCCAG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTCTCTGTCTTCATTaGTGTTCAGATCAGATGATA +
Preference number: 4 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPSLCLH*CSDQMI
Trigger: TATCATCTGATCTGAACATCAATGAAGACAGAGAGA...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCCCAAGATTGAAGTCTaGGTTCCTGCTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLPKIEV*VPAVKE
Trigger: CTCCTTGACAGCAGGAACTCAGACTTCAATCTTGGG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTAGACCCCCAAGATTaGAGTCTGAGTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKLDPQD*SLSSCC
Trigger: ACAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGTTCTTCATTCCAGGTaGCCCAGGGTTAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLVLHSR*PRVRVR
Trigger: TCTAACCCTAACCCTGGGTCACCTGGAATGAAGAAC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGAGGCTCTCCAAGGGGTaGGCTTCAAAGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQRLSKG*ASKDHS
Trigger: ACTATGATCCTTTGAAGCTCACCCCTTGGAGAGCCT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTCAAAGCTATCAGCCTaGGGTTCTGTAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSSKLSA*GSVGSP
Trigger: TGGAGAGCCTACAGAACCTCAGGCTGATAGCTTTGA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTCAAAGCTATCAGCCTaGGGTTCTGTAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVASKLSA*GSVGSP
Trigger: TGGAGAGCCTACAGAACCTCAGGCTGATAGCTTTGA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACTGCAGAGAGCTGGTaGCTGCTCGGTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSATAESW*LLGGDD
Trigger: GTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGT...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALLQSSR*RIGSHL
Trigger: CAAATGGGAGCCAATTCTGCATCTGGACGATTGAAG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCACAAAACCGGGGTTaGAGGTGTATTGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVAQNRG*RCIGWW
Trigger: CCACCATCCAATACACCTGCAACCCCGGTTTTGTGC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATTTTGCTGCCGCGGTTTaGCATTTTGCAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYFAAAV*HFASLP
Trigger: TGGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAA...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTTGCTGCCGCGGTTTaGCATTTTGCAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRFAAAV*HFASLP
Trigger: TGGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCGGGAGAAACTCCATCTaGTGTTTTGTGTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSGRNSI*CFVFLL
Trigger: CAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCC...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTGGACCACACACTCATaGCTTCAGGAGTATATGTGC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSWTTHS*LQEYMC
Trigger: GCACATATACTCCTGAAGGCATGAGTGTGTGGTCCA...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTGGACCACACACTCATaGCTTCAGGAGTATATGTGC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEWTTHS*LQEYMC
Trigger: GCACATATACTCCTGAAGGCATGAGTGTGTGGTCCA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCCTCGAAGGGCATTTTTaGCTGAGGCCCGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLLEGHF*LRPVPQ
Trigger: CTGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAG...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCAGCGACGTCTCTGCTaGCGCTTCTGCTACTTTACA +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLQRRLC*RFCYFT
Trigger: TGTAAAGTAGCAGAAGCGGCAGCAGAGACGTCGCTG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360929.7
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACAGCGACGTCTCTGCTaGCGCTTCTGCTACTTTACA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVQRRLC*RFCYFT
Trigger: TGTAAAGTAGCAGAAGCGGCAGCAGAGACGTCGCTG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGTGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQCTPQD*RSSHCR
Trigger: TCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACA...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSCTPQD*RSSHCR
Trigger: TCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGTGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLCTPQD*RSSHCR
Trigger: TCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACA...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCCTPQD*RSSHCR
Trigger: TCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAAGACGGAGATGGTGTTaGTGGGGCTTCGGATTACCT +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVRRRWC*WGFGLP
Trigger: AGGTAATCCGAAGCCCCACCAACACCATCTCCGTCT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTAGACGGAGATGGTGTTaGTGGGGCTTCGGATTACCT +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLRRRWC*WGFGLP
Trigger: AGGTAATCCGAAGCCCCACCAACACCATCTCCGTCT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCTGTGTCATTCCAGTATaGGTCCCGCACATTGATGCA +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVCVIPV*VPHIDA
Trigger: TGCATCAATGTGCGGGACCCATACTGGAATGACACA...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGTGTCATTCCAGTATaGGTCCCGCACATTGATGCA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLCVIPV*VPHIDA
Trigger: TGCATCAATGTGCGGGACCCATACTGGAATGACACA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCTTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGTGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLWLSLA*RSTVSG
Trigger: CCCAGAAACTGTACTCCTCCACGCCAGACTTAACCA...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIGSEWN*MVKSGV
Trigger: CACGCCAGACTTAACCATCCAGTTCCATTCGGACCC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGTTTTCCAGCCATTCTaGATCTCGGGTAAATCCGAG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLVFQPF*ISGKSE
Trigger: CTCGGATTTACCCGAGATCCAGAATGGCTGGAAAAC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGTTTTCCAGCCATTCTaGATCTCGGGTAAATCCGAG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRVFQPF*ISGKSE
Trigger: CTCGGATTTACCCGAGATCCAGAATGGCTGGAAAAC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGTTTTCCAGCCATTCTaGATCTCGGGTAAATCCGAG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSVFQPF*ISGKSE
Trigger: CTCGGATTTACCCGAGATCCAGAATGGCTGGAAAAC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTACTCCGTGTGAGAAGTaGTTTTCCAGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPTPCEK*FSSHSG
Trigger: TCCAGAATGGCTGGAAAACCACTTCTCACACGGAGT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAACTCCGTGTGAGAAGTaGTTTTCCAGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSTPCEK*FSSHSG
Trigger: TCCAGAATGGCTGGAAAACCACTTCTCACACGGAGT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVIFRQP*VVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAAT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCCCCTGTCTCGTAAATaGGGTTGTCAAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSPLSRK*GCQTRF
Trigger: AAACCGAGTTTGACAACCCCATTTACGAGACAGGGG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CCACAGCTTGAGAGTGGCTTGCTGAACATGGTGATCGATTCTGGCACTTGTAGCAAAACATCATGGGCATaGTTCCCAAAGATGCATGCA +
Preference number: 4 (lower is better)
Translates to: PQLESGLLNMVIDSGTCSKTSWA*FPKMHA
Trigger: TGCATGCATCTTTGGGAACCATGCCCATGATGTTTT...GCTACAAGTGCCAGAATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAACTGAAAAATTGCCTTTaGTCGTTTATCACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQLKNCL*SFITFL
Trigger: TAGAAAGGTGATAAACGACCAAAGGCAATTTTTCAG...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCCAATTCTTCATTaGAACTCTCAAATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHHPILH*NSQISH
Trigger: ATGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTG...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCCCGGTTTCACTGGGTTaGGGGAAAACAGACCCTGAT +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGPVSLG*GKTDPD
Trigger: ATCAGGGTCTGTTTTCCCCCAACCCAGTGAAACCGG...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCAATTCCAGAGAGAATaGGAGGGCACCAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLQFQRE*EGTKEG
Trigger: ACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAATTG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGTCAATAAGAACATCTaGGGTGTGGCCTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRVNKNI*GVAWLV
Trigger: AACTAGCCAGGCCACACCCCAGATGTTCTTATTGAC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGTCAATAAGAACATCTaGGGTGTGGCCTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLVNKNI*GVAWLV
Trigger: AACTAGCCAGGCCACACCCCAGATGTTCTTATTGAC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGCTTTGCTTCCTTCTaGGCTGTTTGGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLCFASF*AVWQSS
Trigger: TGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCA...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCCAGAGTTCACCTGCTTaGGCGAAGGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIQSSPA*AKAVSS
Trigger: AGAAGAAACTGCCTTCGCTCAAGCAGGTGAACTCTG...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTCAGAGTTCACCTGCTTaGGCGAAGGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIQSSPA*AKAVSS
Trigger: AGAAGAAACTGCCTTCGCTCAAGCAGGTGAACTCTG...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTTGGTCTGCCCGCTGTaGACCGTCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFLVCPL*TVILSL
Trigger: CAAGGACAGGATGACGGTTCACAGCGGGCAGACCAA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAVVEKS*LVGLPA
Trigger: AGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGAC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACTTCAAATCGGATGTTaGAGGTGGAGGCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSLQIGC*RWRPPG
Trigger: CCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACACGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATRTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGGTCACACTGGTAGGTaGTTCTGGCTCCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGGHTGR*FWLPAP
Trigger: TGGTGCGGGGAGCCAGAATCACCTACCAGTGTGACC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTAGTAGCGACATCTTGTaGTGTAAATGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSSSDIL*CKCRLL
Trigger: GAGGAGCCTACATTTACATCACAAGATGTCGCTACT...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAGTAGCGACATCTTGTaGTGTAAATGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVSSDIL*CKCRLL
Trigger: GAGGAGCCTACATTTACATCACAAGATGTCGCTACT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAGTAGCGACATCTTGTaGTGTAAATGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSSSDIL*CKCRLL
Trigger: GAGGAGCCTACATTTACATCACAAGATGTCGCTACT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSTRFPR*SGCRGG
Trigger: CCCACCCCTACAGCCAGATCACCGTGGAAACCGAGT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTATTGAGGCTGTAACATaGATTTGGCTGAGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSIEAVT*IWLRPR
Trigger: TCGCGGCCTCAGCCAAATTCATGTTACAGCCTCAAT...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGTTAGCATGGCATTGCTaGTGGGAGAAACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLLAWHC*WEKLHL
Trigger: CAGATGGAGTTTCTCCCATCAGCAATGCCATGCTAA...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGAGTCTCCTCTATTTTaGGGGCTGAGATATTCCAGA +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLESPLF*GLRYSR
Trigger: TCTGGAATATCTCAGCCCTCAAAATAGAGGAGACTC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGAGTCTCCTCTATTTTaGGGGCTGAGATATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVESPLF*GLRYSR
Trigger: TCTGGAATATCTCAGCCCTCAAAATAGAGGAGACTC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCACACTGTACATTGTTaGACTCGTATGATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFHTVHC*TRMICL
Trigger: GAGACAGATCATACGAGTTCAACAATGTACAGTGTG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCACACTGTACATTGTTaGACTCGTATGATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPHTVHC*TRMICL
Trigger: GAGACAGATCATACGAGTTCAACAATGTACAGTGTG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGGCTCTCCAAGGGGTaGGCTTCAAAGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRLSKG*ASKDHS
Trigger: ACTATGATCCTTTGAAGCTCACCCCTTGGAGAGCCT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGTTATACAACCCTCCTaGTTATGCAGATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPVIQPS*LCRCFA
Trigger: AGCAAAGCATCTGCATAATCAGGAGGGTTGTATAAC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGTGATGTGCAGAGGGTaGGGTCCCATCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGVMCRG*GPIQHQ
Trigger: CTGGTGCTGGATGGGACCGCACCCTCTGCACATCAC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCTGGAGAAGCTCACACTaGAGAGAGCTGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLWRSSH*RELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCA...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCCCGATGGTGGCATTGTaGACTGCCCCTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFPMVAL*TAPPQG
Trigger: TCCTTGTGGAGGGGCAGTGCACAATGCCACCATCGG...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVELQSSR*RIGSHL
Trigger: CAAATGGGAGCCAATTCTGCATCTGGACGATTGAAG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSLQSSR*RIGSHL
Trigger: CAAATGGGAGCCAATTCTGCATCTGGACGATTGAAG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPLQSSR*RIGSHL
Trigger: CAAATGGGAGCCAATTCTGCATCTGGACGATTGAAG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRLQSSR*RIGSHL
Trigger: CAAATGGGAGCCAATTCTGCATCTGGACGATTGAAG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCGATGCGGATGGTGTTaGCTTCGCTCAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRCGWC*LRSAGP
Trigger: AGGGCCTGCTGAGCGAAGGCAACACCATCCGCATCG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTTTGCTGCCGCGGTTTaGCATTTTGCAAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAFAAAV*HFASLP
Trigger: TGGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGCTGTTTTGTGTTTTTaGTGCCGCGGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKAVLCF*CRGLPF
Trigger: AAATGGCAAACCGCGGCAGCAAAAACACAAAACAGC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGGGAGAAACTCCATCTaGTGTTTTGTGTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALGRNSI*CFVFLL
Trigger: CAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAGGAGGGTACATGTGTaGCTAAAATCAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRRVHV*LKSTFP
Trigger: AGGGAAAGTTGATTTTAGGCACACATGTACCCTCCT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGACATAGGAAGATCATaGCCTTCGGATTCACTCGAA +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSDIGRS*PSDSLE
Trigger: TTCGAGTGAATCCGAAGGGCATGATCTTCCTATGTC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGACATAGGAAGATCATaGCCTTCGGATTCACTCGAA +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLDIGRS*PSDSLE
Trigger: TTCGAGTGAATCCGAAGGGCATGATCTTCCTATGTC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTAATTTCCCAGGAGAATaGCTACCTTTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLNFPGE*LPLGVL
Trigger: CAGCACCCCCAAAGGTAGGCATTCTCCTGGGAAATT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATTTAGGACCTTCACCTaGTGTCAGACTCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVFRTFT*CQTLRV
Trigger: CACCCTCAGAGTCTGACAGCAGGTGAAGGTCCTAAA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS-3UTR CCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCAAGGCAGTTTCTTCTTaGGGGGCAAGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLKAVSS*GARRAW
Trigger: CCAAGCACGCCTTGCCCCCCAAGAAGAAACTGCCTT...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCGGCCAGGCTTCTCCGTaGAGGAGGAGAGGAGATCTA +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFGQASP*RRRGDL
Trigger: TAGATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCC...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHRRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAGSRRR*CWWGFG
Trigger: TCCGAAGCCCCACCAACACCATCTCCGTCTACTTCC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGTCCAGATGCAGAATTaGCTCCCATTTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALVQMQN*LPFVFS
Trigger: TGAAAACACAAATGGGAGCCAATTCTGCATCTGGAC...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGTCCAGATGCAGAATTaGCTCCCATTTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFVQMQN*LPFVFS
Trigger: TGAAAACACAAATGGGAGCCAATTCTGCATCTGGAC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCG +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLEELTC*SARCEP
Trigger: CGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTC...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTGTGTCATTCCAGTATaGGTCCCGCACATTGATGCA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSCVIPV*VPHIDA
Trigger: TGCATCAATGTGCGGGACCCATACTGGAATGACACA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATTACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTTGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSWLSLA*RSTVSG
Trigger: CCCAGAAACTGTACTCCTCCACGCCAGACTTAACCA...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGACTCCGTGTGAGAAGTaGTTTTCCAGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLTPCEK*FSSHSG
Trigger: TCCAGAATGGCTGGAAAACCACTTCTCACACGGAGT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTACTCCGTGTGAGAAGTaGTTTTCCAGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVATPCEK*FSSHSG
Trigger: TCCAGAATGGCTGGAAAACCACTTCTCACACGGAGT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTGCAGGTGTATTGGATaGTGGTCCCCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSACRCIG*WSPPAA
Trigger: TGCTGCTGGTGGGGACCACCATCCAATACACCTGCA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCGCTTGTACAGGATTTaGTATCCATTTTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRLYRI*YPFSGS
Trigger: GCTGCCTGAAAATGGATACCAAATCCTGTACAAGCG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCGCTTGTACAGGATTTaGTATCCATTTTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRLYRI*YPFSGS
Trigger: GCTGCCTGAAAATGGATACCAAATCCTGTACAAGCG...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCGCTTGTACAGGATTTaGTATCCATTTTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVERLYRI*YPFSGS
Trigger: GCTGCCTGAAAATGGATACCAAATCCTGTACAAGCG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAAACCTCATACTCTCTaGTTTCCCCTGTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFKPHTL*FPLSRK
Trigger: TTTACGAGACAGGGGAAACCAGAGAGTATGAGGTTT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAAACCTCATACTCTCTaGTTTCCCCTGTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALKPHTL*FPLSRK
Trigger: TTTACGAGACAGGGGAAACCAGAGAGTATGAGGTTT...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCAATCAAGTGCCACATaGTCTCTGGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWQSSAT*SLDECL
Trigger: GAGACATTCATCCAGAGACCATGTGGCACTTGATTG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCAATCAAGTGCCACATaGTCTCTGGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEQSSAT*SLDECL
Trigger: GAGACATTCATCCAGAGACCATGTGGCACTTGATTG...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCAATCAAGTGCCACATaGTCTCTGGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKQSSAT*SLDECL
Trigger: GAGACATTCATCCAGAGACCATGTGGCACTTGATTG...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVERQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAAAACATCATGGGCATaGTTCCCAAAGATGCATGCA +
Preference number: 4 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFKTSWA*FPKMHA
Trigger: TGCATGCATCTTTGGGAACCATGCCCATGATGTTTT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCTGCATTTCCAAACATaGCACCTCCTTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYLHFQT*HLLFPI
Trigger: GATGGGAAAAAGGAGGTGCCATGTTTGGAAATGCAG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCTGCATTTCCAAACATaGCACCTCCTTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWLHFQT*HLLFPI
Trigger: GATGGGAAAAAGGAGGTGCCATGTTTGGAAATGCAG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCAATAAGAACATCTaGGGTGTGGCCTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSVNKNI*GVAWLV
Trigger: AACTAGCCAGGCCACACCCCAGATGTTCTTATTGAC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
3UTR CAA 72 bp ATGGCATTGCTGATGGGAGAAACTCCATCTGCTGTTTaGTGTTTTTGCTGCCGCGGTTTGCCATTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: MALLMGETPSAV*CFCCRGLPFCK
Trigger: CTTGCAAAATGGCAAACCGCGGCAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCCATCAGCAATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATTPESC*GAAVGS
Trigger: ACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSASCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTGGTCTGCCCGCTGTaGACCGTCATCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGLVCPL*TVILSL
Trigger: CAAGGACAGGATGACGGTTCACAGCGGGCAGACCAA...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSPRCGA*PRRHRR
Trigger: TCTACGATGGCGACGAGGTCATGCCCCACATCTTGG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATGGTCACTTCACCCATaGGCTCAAAGCCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATWSLHP*AQSLRS
Trigger: GCTACGAAGGCTTTGAGCTCATGGGTGAAGTGACCA...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGAGTAGCGACATCTTGTaGTGTAAATGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQSSDIL*CKCRLL
Trigger: GAGGAGCCTACATTTACATCACAAGATGTCGCTACT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAACCTGCCTTCAGAATTaGGGCTGTAACATGAATTTG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSTCLQN*GCNMNL
Trigger: CAAATTCATGTTACAGCCTCAATTCTGAAGGCAGGT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTTTTATTACCACAGCTTaGGAGTGGCTTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLFITTA*EWLAEH
Trigger: ATGTTCAGCAAGCCACTCTCAAGCTGTGGTAATAAA...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTTATTACCACAGCTTaGGAGTGGCTTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRFITTA*EWLAEH
Trigger: ATGTTCAGCAAGCCACTCTCAAGCTGTGGTAATAAA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCGATGTTCAGATCAGATaGTACAGGATTCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSDVQIR*YRIPLD
Trigger: ATCCAGTGGAATCCTGTATCATCTGATCTGAACATC...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGATGTTCAGATCAGATaGTACAGGATTCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRDVQIR*YRIPLD
Trigger: ATCCAGTGGAATCCTGTATCATCTGATCTGAACATC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGTCTGTCCAAGCCATTaGCTGTCACCACCATGTCAC +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATVCPSH*LSPPCH
Trigger: GTGACATGGTGGTGACAGTCAATGGCTTGGACAGAC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTTAGACCCCCAAGATTaGAGTCTGAGTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEILDPQD*SLSSCC
Trigger: ACAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGATCTTTCTCCAAACATaGCATTGTCCACTAATGGCC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEIFLQT*HCPLMA
Trigger: GGCCATTAGTGGACAATGTCATGTTTGGAGAAAGAT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTATATCTGACCTCAAATaGCTCGTCATGCCTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPISDLK*LVMPSQ
Trigger: TTGACTAGGCATGACGAGTCATTTGAGGTCAGATAT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCCTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVALQSSR*RIGSHL
Trigger: CAAATGGGAGCCAATTCTGCATCTGGACGATTGAAG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGGGAGAAACTCCATCTaGTGTTTTGTGTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLGRNSI*CFVFLL
Trigger: CAGCAAAAACACAAAACAGCAGATGGAGTTTCTCCC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAATGCATGCAATTCAATaGAGCCTTAGCATGGCATTG +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRMHAIQ*SLSMAL
Trigger: CAATGCCATGCTAAGGCTGCATTGAATTGCATGCAT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCATAGTATTTCTTCCATaGACCCGCACCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGIVFLP*TRTLHL
Trigger: AAGGTGGAGGGTGCGGGTGCATGGAAGAAATACTAT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAGGAGGGTACATGTGTaGCTAAAATCAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRRVHV*LKSTFP
Trigger: AGGGAAAGTTGATTTTAGGCACACATGTACCCTCCT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTATTATGCAGATGCTTTaGTTCCTTCTGGGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPIMQML*FLLGCL
Trigger: CAAACAGCCCAGAAGGAAGCAAAGCATCTGCATAAT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGAGGTAGTGGTCTCCTaGCTCTCCTCTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSEVVVS*LSSEAD
Trigger: GTCAGCCTCAGAGGAGAGCCAGGAGACCACTACCTC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCC +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRRWCW*GFGLPA
Trigger: GGCAGGTAATCCGAAGCCCCACCAACACCATCTCCG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGTCCAGATGCAGAATTaGCTCCCATTTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLVQMQN*LPFVFS
Trigger: TGAAAACACAAATGGGAGCCAATTCTGCATCTGGAC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGTCCAGATGCAGAATTaGCTCCCATTTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKVQMQN*LPFVFS
Trigger: TGAAAACACAAATGGGAGCCAATTCTGCATCTGGAC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVEFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCTTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCTCAGATTCAGGAACTaGATATCTAAGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALLRFRN*ISKKIR
Trigger: ACGGATCTTCTTAGATATCCAGTTCCTGAATCTGAG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCTCAGATTCAGGAACTaGATATCTAAGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPLRFRN*ISKKIR
Trigger: ACGGATCTTCTTAGATATCCAGTTCCTGAATCTGAG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTACTGCCCCAAGATGTaGGGCATGACCTCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGYCPKM*GMTSSP
Trigger: TGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTA...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCGCTTGTACAGGATTTaGTATCCATTTTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSRLYRI*YPFSGS
Trigger: GCTGCCTGAAAATGGATACCAAATCCTGTACAAGCG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHGEGLS*QVESLV
Trigger: TACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACC...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGAAACCTCATACTCTCTaGTTTCCCCTGTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKKPHTL*FPLSRK
Trigger: TTTACGAGACAGGGGAAACCAGAGAGTATGAGGTTT...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAAAACCTCATACTCTCTaGTTTCCCCTGTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRKPHTL*FPLSRK
Trigger: TTTACGAGACAGGGGAAACCAGAGAGTATGAGGTTT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAAACCTCATACTCTCTaGTTTCCCCTGTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSKPHTL*FPLSRK
Trigger: TTTACGAGACAGGGGAAACCAGAGAGTATGAGGTTT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAAACCTCATACTCTCTaGTTTCCCCTGTCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSKPHTL*FPLSRK
Trigger: TTTACGAGACAGGGGAAACCAGAGAGTATGAGGTTT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCAAAACATCATGGGCATaGTTCCCAAAGATGCATGCA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPKTSWA*FPKMHA
Trigger: TGCATGCATCTTTGGGAACCATGCCCATGATGTTTT...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATTGTCACTGTATGAGTaGGGCCGCTGGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSLSLYE*GRWCLP
Trigger: TGGGAGGCACCAGCGGCCCCACTCATACAGTGACAA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCTGCATTTCCAAACATaGCACCTCCTTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCLHFQT*HLLFPI
Trigger: GATGGGAAAAAGGAGGTGCCATGTTTGGAAATGCAG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCGATACAGGATTCCACTaGATGGTCTGCTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLDTGFH*MVCCDL
Trigger: TAAATCACAGCAGACCATCCAGTGGAATCCTGTATC...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGATACAGGATTCCACTaGATGGTCTGCTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRDTGFH*MVCCDL
Trigger: TAAATCACAGCAGACCATCCAGTGGAATCCTGTATC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGTTCTTGCATTAAATaGGGCTTTGGGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGSCIK*GFGSWK
Trigger: TTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGGGTTCTTGCATTAAATaGGGCTTTGGGTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQGSCIK*GFGSWK
Trigger: TTTCCAGGACCCAAAGCCCCATTTAATGCAAGAACC...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTCCTTCTGGGCTGTTTaGCAGTCTTCAAAGCTATCA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVASFWAV*QSSKLS
Trigger: TGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTCCTTCTGGGCTGTTTaGCAGTCTTCAAAGCTATCA +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCSFWAV*QSSKLS
Trigger: TGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCTGCTTTGCTTCCTTCTaGGCTGTTTGGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGCFASF*AVWQSS
Trigger: TGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCA...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAGACACCAGTTAGTTTaGGGAGATTTAGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRHQLV*GDLGPS
Trigger: TGAAGGTCCTAAATCTCCCCAAACTAACTGGTGTCT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
3UTR CAA 72 bp GCAGAAGGAAAATATTCTGGTCTTAGACCCCCAAGATaGAAGTCTGAGTTCCTGCTGTCAAGGAGGGTACAT +
Preference number: 4 (lower is better)
Translates to: AEGKYSGLRPPR*KSEFLLSRRVH
Trigger: ATGTACCCTCCTTGACAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAAGACCAGAATATTTTCCTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACGCACCAACTCCGTGTaGGAAGTGGTTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSRTNSV*EVVFQP
Trigger: TGGCTGGAAAACCACTTCTCACACGGAGTTGGTGCG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCTGTTCAAAACTGTCTTaGTTAACTTTACACACGGGC +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVCSKLS*LTLHTG
Trigger: GCCCGTGTGTAAAGTTAATCAAGACAGTTTTGAACA...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS-3UTR TCA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAAGTAGCGACATCTTGTaGTGTAAATGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVSSDIL*CKCRLL
Trigger: GAGGAGCCTACATTTACATCACAAGATGTCGCTACT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR TCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCCGAGGAGATTGTGGTTaGGTTCACAAGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLRGDCG*VHKSPS
Trigger: AGAAGGGGACTTGTGAACTCAACCACAATCTCCTCG...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGACTTAGATTTGTACTaGAAACATCATGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLDLDLY*KHHGHG
Trigger: ACCATGCCCATGATGTTTTCAGTACAAATCTAAGTC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGAGTCTCCTCTATTTTaGGGGCTGAGATATTCCAGA +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIESPLF*GLRYSR
Trigger: TCTGGAATATCTCAGCCCTCAAAATAGAGGAGACTC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGGAATCCTTTCTGAATaGAATTCCTCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSGILSE*NSSLCL
Trigger: AAGACAGAGAGAGGAATTTCATTCAGAAAGGATTCC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGAATCCTTTCTGAATaGAATTCCTCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGILSE*NSSLCL
Trigger: AAGACAGAGAGAGGAATTTCATTCAGAAAGGATTCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGGAATCCTTTCTGAATaGAATTCCTCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRGILSE*NSSLCL
Trigger: AAGACAGAGAGAGGAATTTCATTCAGAAAGGATTCC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATGTCTGTCCAAGCCATTaGCTGTCACCACCATGTCAC +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHVCPSH*LSPPCH
Trigger: GTGACATGGTGGTGACAGTCAATGGCTTGGACAGAC...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCTACTAAGACAGAACTaGGACACTGGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQLLRQN*DTGLLK
Trigger: TTTCAGAAGACCAGTGTCTCAGTTCTGTCTTAGTAG...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTACTAAGACAGAACTaGGACACTGGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVALLRQN*DTGLLK
Trigger: TTTCAGAAGACCAGTGTCTCAGTTCTGTCTTAGTAG...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCAAGCTAAAGAGGGTTaGGTGTGTGCATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSQAKEG*VCAFLK
Trigger: CTTTAAAAATGCACACACTCAACCCTCTTTAGCTTG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAAGCTAAAGAGGGTTaGGTGTGTGCATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLQAKEG*VCAFLK
Trigger: CTTTAAAAATGCACACACTCAACCCTCTTTAGCTTG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGTTATACAACCCTCCTaGTTATGCAGATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAVIQPS*LCRCFA
Trigger: AGCAAAGCATCTGCATAATCAGGAGGGTTGTATAAC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTATATCTGACCTCAAATaGCTCGTCATGCCTAGTCAA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSISDLK*LVMPSQ
Trigger: TTGACTAGGCATGACGAGTCATTTGAGGTCAGATAT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCTACCTTTGGGGGTGCTaGACAACTCAAATAATATCT +
Preference number: 4 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVYLWGC*TTQIIS
Trigger: AGATATTATTTGAGTTGTTCAGCACCCCCAAAGGTA...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCTGTTCCCAAGGTACTaGCCCAAGATGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGLFPRY*PKMWGM
Trigger: CATGCCCCACATCTTGGGGCAGTACCTTGGGAACAG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATGCACAAAACCGGGGTTaGAGGTGTATTGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHAQNRG*RCIGWW
Trigger: CCACCATCCAATACACCTGCAACCCCGGTTTTGTGC...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR GCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAATGGCTGTCCCAGGATaGAGCGGATGGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSMAVPG*SGWSLH
Trigger: GTGAAGTGACCATCCGCTGCATCCTGGGACAGCCAT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCCATGGTTCCCAAAGATaGATGCAATTCAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIHGSQR*MQFNAA
Trigger: GGCTGCATTGAATTGCATGCATCTTTGGGAACCATG...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAAAAGAGGGTTCCAAATaGCACTGTGCCCGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATKEGSK*HCARLS
Trigger: AGACAGACGGGCACAGTGGCATTTGGAACCCTCTTT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGAGAGGGTTGAGTGTGTaGATTTTTAAAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: YADALLPSGLFGSLQSYQRGLSV*IFKAQG
Trigger: ACCCTGTGCTTTAAAAATGCACACACTCAACCCTCT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTATTATGCAGATGCTTTaGTTCCTTCTGGGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAIMQML*FLLGCL
Trigger: CAAACAGCCCAGAAGGAAGCAAAGCATCTGCATAAT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTTCCAGCGACGTCTCTaGTGCCGCTTCTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFFQRRL*CRFCYF
Trigger: AAAGTAGCAGAAGCGGCAGCAGAGACGTCGCTGGAA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360929.7
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTAAGGCAGTTTCTTCTTaGGGGGCAAGGCGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGKAVSS*GARRAW
Trigger: CCAAGCACGCCTTGCCCCCCAAGAAGAAACTGCCTT...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVEGQQ*VVAGVN
Trigger: ATTGACTCCAGCGACTACCCACTGCTGCCCCTCAAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTTTTCAGGGTAACTTaGGGAGAGGACGCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVFRVT*GEDAAD
Trigger: ATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCCAGATGCAGAATTaGCTCCCATTTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSVQMQN*LPFVFS
Trigger: TGAAAACACAAATGGGAGCCAATTCTGCATCTGGAC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACAGCTTCTGGCCCTCTaGAGCTTCAATCGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRQLLAL*SFNRPD
Trigger: ATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATGCAGGTGCAGCTTCTaGCCCTCTGGAGCTTCAATC +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSCRCSF*PSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCCTCAGATTCAGGAACTaGATATCTAAGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSLRFRN*ISKKIR
Trigger: ACGGATCTTCTTAGATATCCAGTTCCTGAATCTGAG...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACTCAGATTCAGGAACTaGATATCTAAGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRLRFRN*ISKKIR
Trigger: ACGGATCTTCTTAGATATCCAGTTCCTGAATCTGAG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCCGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSARRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATGAGGCAGGCGGAGGTTaGAATAGTAGCGACATCTTG +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHEAGGG*NSSDIL
Trigger: CAAGATGTCGCTACTATTCCAACCTCCGCCTGCCTC...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLVSRRL*LSSQVP
Trigger: GGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGTACTGAAAACATCATaGGCATGGTTCCCAAAGATG +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAVLKTS*AWFPKM
Trigger: CATCTTTGGGAACCATGCCCATGATGTTTTCAGTAC...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCCAATTCCAGAGAGAATaGGAGGGCACCAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLQFQRE*EGTKEG
Trigger: ACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAATTG...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTGGGGCTTTGGGTCCTaGAAAGCAGCCTTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAWGFGS*KAAFSY
Trigger: ATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTTCCTTCTGGGCTGTTTaGCAGTCTTCAAAGCTATCA +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLSFWAV*QSSKLS
Trigger: TGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGA...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTAGTTGCAGCTCAGCATaGAGGCCTGGTAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGSCSSA*RPGSEA
Trigger: AGCTTCACTACCAGGCCTTCATGCTGAGCTGCAACT...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGTGTTCAAAACTGTCTTaGTTAACTTTACACACGGGC +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLCSKLS*LTLHTG
Trigger: GCCCGTGTGTAAAGTTAATCAAGACAGTTTTGAACA...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCCACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTACCTGCCTTCAGAATTaGGGCTGTAACATGAATTTG +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLTCLQN*GCNMNL
Trigger: CAAATTCATGTTACAGCCTCAATTCTGAAGGCAGGT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCACGCTCTTTCATCATTaGAAGAGTGTCAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSTLFHH*KSVKEK
Trigger: CTTTTCTTTGACACTCTTTCAATGATGAAAGAGCGT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATACGCTCTTTCATCATTaGAAGAGTGTCAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYTLFHH*KSVKEK
Trigger: CTTTTCTTTGACACTCTTTCAATGATGAAAGAGCGT...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCCTCTATTTTGAGGGCTaGGATATTCCAGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLLYFEG*DIPEPQ
Trigger: CTGGGGTTCTGGAATATCTCAGCCCTCAAAATAGAG...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATTCTCTCTGTCTTCATTaGTGTTCAGATCAGATGATA +
Preference number: 4 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYSLCLH*CSDQMI
Trigger: TATCATCTGATCTGAACATCAATGAAGACAGAGAGA...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTTAGACCCCCAAGATTaGAGTCTGAGTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSALDPQD*SLSSCC
Trigger: ACAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCATCTTTCTCCAAACATaGCATTGTCCACTAATGGCC +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIIFLQT*HCPLMA
Trigger: GGCCATTAGTGGACAATGTCATGTTTGGAGAAAGAT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTATTGTTGAACTCGTATaGTCTGTCTCTAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLIVELV*SVSRLK
Trigger: TTTTAGCCTAGAGACAGATCATACGAGTTCAACAAT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATTGTTGAACTCGTATaGTCTGTCTCTAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLIVELV*SVSRLK
Trigger: TTTTAGCCTAGAGACAGATCATACGAGTTCAACAAT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTGTTATACAACCCTCCTaGTTATGCAGATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLVIQPS*LCRCFA
Trigger: AGCAAAGCATCTGCATAATCAGGAGGGTTGTATAAC...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCTGGCAGAGTTCACCTaGTTGAGCGAAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGLAEFT*LSEGSF
Trigger: GAAACTGCCTTCGCTCAAGCAGGTGAACTCTGCCAG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR GCA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTGTCTCTGAAAAATTaGCTTTGGTCGTTTATCACC +
Preference number: 4 (lower is better)
Translates to: QSSATWSLDECLEEIVVELSLKN*LWSFIT
Trigger: GGTGATAAACGACCAAAGGCAATTTTTCAGAGACAA...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTCTCTGAAAAATTaGCTTTGGTCGTTTATCACC +
Preference number: 4 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRLSLKN*LWSFIT
Trigger: GGTGATAAACGACCAAAGGCAATTTTTCAGAGACAA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCAAAGAGGGTTCCAAATaGCACTGTGCCCGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFKEGSK*HCARLS
Trigger: AGACAGACGGGCACAGTGGCATTTGGAACCCTCTTT...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGGAGGGTACATGTGTaGCTAAAATCAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRRVHV*LKSTFP
Trigger: AGGGAAAGTTGATTTTAGGCACACATGTACCCTCCT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTCAAATGACTCGTCATaGCTAGTCAAGGACATAGGA +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEISNDSS*LVKDIG
Trigger: TCCTATGTCCTTGACTAGGCATGACGAGTCATTTGA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGATGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRCTPQD*RSSHCR
Trigger: TCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACA...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGGSEWN*MVKSGV
Trigger: CACGCCAGACTTAACCATCCAGTTCCATTCGGACCC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGTTTTCCAGCCATTCTaGATCTCGGGTAAATCCGAG +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATVFQPF*ISGKSE
Trigger: CTCGGATTTACCCGAGATCCAGAATGGCTGGAAAAC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACTCCGTGTGAGAAGTaGTTTTCCAGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSATPCEK*FSSHSG
Trigger: TCCAGAATGGCTGGAAAACCACTTCTCACACGGAGT...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCCACCCAATTCTTCATTaGAACTCTCAAATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLHPILH*NSQISH
Trigger: ATGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTG...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGATACAGGATTCCACTaGATGGTCTGCTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIDTGFH*MVCCDL
Trigger: TAAATCACAGCAGACCATCCAGTGGAATCCTGTATC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGATGGGGCTTTGGGTCCTaGAAAGCAGCCTTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRWGFGS*KAAFSY
Trigger: ATAGCTAAAGGCTGCTTTCCAGGACCCAAAGCCCCA...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCAGAGTTCACCTGCTTaGGCGAAGGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGQSSPA*AKAVSS
Trigger: AGAAGAAACTGCCTTCGCTCAAGCAGGTGAACTCTG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACAGAGTTCACCTGCTTaGGCGAAGGCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSQSSPA*AKAVSS
Trigger: AGAAGAAACTGCCTTCGCTCAAGCAGGTGAACTCTG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTTCTCTCATTTGTCTCTaGAAAATTGCCTTTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLSLICL*KIAFGR
Trigger: ACGACCAAAGGCAATTTTTCAGAGACAAATGAGAGA...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTCTCTCTGTCTTCATTaGTGTTCAGATCAGATGATA +
Preference number: 4 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVASLCLH*CSDQMI
Trigger: TATCATCTGATCTGAACATCAATGAAGACAGAGAGA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGATTGTTGAACTCGTATaGTCTGTCTCTAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLIVELV*SVSRLK
Trigger: TTTTAGCCTAGAGACAGATCATACGAGTTCAACAAT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAATCCTGTCCTTGTCATaGAGCAACAGCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRILSLS*SNSLSK
Trigger: CTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACACATGGTTCCCAAAGATaGATGCAATTCAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATHGSQR*MQFNAA
Trigger: GGCTGCATTGAATTGCATGCATCTTTGGGAACCATG...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTTGTCTCTGAAAAATTaGCTTTGGTCGTTTATCACC +
Preference number: 4 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCLSLKN*LWSFIT
Trigger: GGTGATAAACGACCAAAGGCAATTTTTCAGAGACAA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATATAGTATTTCTTCCATaGACCCGCACCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHIVFLP*TRTLHL
Trigger: AAGGTGGAGGGTGCGGGTGCATGGAAGAAATACTAT...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTGGACCACACACTCATaGCTTCAGGAGTATATGTGC +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFWTTHS*LQEYMC
Trigger: GCACATATACTCCTGAAGGCATGAGTGTGTGGTCCA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGAAATGGATTGAGTTCTaGCTTTTAAGGAAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLKWIEF*LLRKGY
Trigger: GTAACCTTTCCTTAAAAGGCAGAACTCAATCCATTT...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGATGTGTCATTCCAGTATaGGTCCCGCACATTGATGCA +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRCVIPV*VPHIDA
Trigger: TGCATCAATGTGCGGGACCCATACTGGAATGACACA...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCGTCGCCATCGTAGATaGTCAAGATGTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRRHRR*SRCHCC
Trigger: GCAACAGTGACATCTTGACCATCTACGATGGCGACG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGWLSLA*RSTVSG
Trigger: CCCAGAAACTGTACTCCTCCACGCCAGACTTAACCA...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGPAGSE*NWMVKS
Trigger: AGACTTAACCATCCAGTTCCATTCGGACCCTGCTGG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGAAAAATTGCCTTTaGTCGTTTATCACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPLKNCL*SFITFL
Trigger: TAGAAAGGTGATAAACGACCAAAGGCAATTTTTCAG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCACCCAATTCTTCATTaGAACTCTCAAATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLHPILH*NSQISH
Trigger: ATGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGCAAGATTCTTTTCTaGCAGAAGGAAAATATTCTG +
Preference number: 4 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLCKILF*QKENIL
Trigger: CAGAATATTTTCCTTCTGCCAGAAAAGAATCTTGCA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCTGCAAGATTCTTTTCTaGCAGAAGGAAAATATTCTG +
Preference number: 4 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPCKILF*QKENIL
Trigger: CAGAATATTTTCCTTCTGCCAGAAAAGAATCTTGCA...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATGCAAGATTCTTTTCTaGCAGAAGGAAAATATTCTG +
Preference number: 4 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSCKILF*QKENIL
Trigger: CAGAATATTTTCCTTCTGCCAGAAAAGAATCTTGCA...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGCAGGAGTCATTCCTTaGTACCTCTATGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATAGVIP*YLYVVH
Trigger: ATGAACTACATAGAGGTATCAAGGAATGACTCCTGC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACACATGGTCTCTGGATaGATGTCTCGAGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSHMVSG*MSRGDC
Trigger: ACAATCTCCTCGAGACATTCATCCAGAGACCATGTG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAACCTGCCTTCAGAATTaGGGCTGTAACATGAATTTG +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATTCLQN*GCNMNL
Trigger: CAAATTCATGTTACAGCCTCAATTCTGAAGGCAGGT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTTTATTACCACAGCTTaGGAGTGGCTTGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAFITTA*EWLAEH
Trigger: ATGTTCAGCAAGCCACTCTCAAGCTGTGGTAATAAA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGATGTTCAGATCAGATaGTACAGGATTCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSADVQIR*YRIPLD
Trigger: ATCCAGTGGAATCCTGTATCATCTGATCTGAACATC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCCACACTGTACATTGTTaGACTCGTATGATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSAHTVHC*TRMICL
Trigger: GAGACAGATCATACGAGTTCAACAATGTACAGTGTG...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCGCTGTTTTGTGTTTTTaGTGCCGCGGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFAVLCF*CRGLPF
Trigger: AAATGGCAAACCGCGGCAGCAAAAACACAAAACAGC...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAAGAGGGTTGAGTGTGTaGATTTTTAAAGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATRGLSV*IFKAQG
Trigger: ACCCTGTGCTTTAAAAATGCACACACTCAACCCTCT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATGACATAGGAAGATCATaGCCTTCGGATTCACTCGAA +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHDIGRS*PSDSLE
Trigger: TTCGAGTGAATCCGAAGGGCATGATCTTCCTATGTC...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCTCAAATGACTCGTCATaGCTAGTCAAGGACATAGGA +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLSNDSS*LVKDIG
Trigger: TCCTATGTCCTTGACTAGGCATGACGAGTCATTTGA...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTTTTCCAGCCATTCTaGATCTCGGGTAAATCCGAG +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVFQPF*ISGKSE
Trigger: CTCGGATTTACCCGAGATCCAGAATGGCTGGAAAAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCCGCTTGTACAGGATTTaGTATCCATTTTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFRLYRI*YPFSGS
Trigger: GCTGCCTGAAAATGGATACCAAATCCTGTACAAGCG...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCCAATCAAGTGCCACATaGTCTCTGGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFQSSAT*SLDECL
Trigger: GAGACATTCATCCAGAGACCATGTGGCACTTGATTG...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCTGAAAAATTGCCTTTaGTCGTTTATCACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLLKNCL*SFITFL
Trigger: TAGAAAGGTGATAAACGACCAAAGGCAATTTTTCAG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAAGCTATTTCTTGCCATaGACCACACACTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRSYFLP*TTHSCL
Trigger: AAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCT...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTAGCGACATCTTGTaGTGTAAATGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSSSDIL*CKCRLL
Trigger: GAGGAGCCTACATTTACATCACAAGATGTCGCTACT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGACTTAGATTTGTACTaGAAACATCATGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: DKESKQKTVDILGFQSSADLDLY*KHHGHG
Trigger: ACCATGCCCATGATGTTTTCAGTACAAATCTAAGTC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACTACTAAGACAGAACTaGGACACTGGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRLLRQN*DTGLLK
Trigger: TTTCAGAAGACCAGTGTCTCAGTTCTGTCTTAGTAG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATATATCTGACCTCAAATaGCTCGTCATGCCTAGTCAA +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHISDLK*LVMPSQ
Trigger: TTGACTAGGCATGACGAGTCATTTGAGGTCAGATAT...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCTACCTTTGGGGGTGCTaGACAACTCAAATAATATCT +
Preference number: 4 (lower is better)
Translates to: GKYILKMTPFRESVHLSLYLWGC*TTQIIS
Trigger: AGATATTATTTGAGTTGTTCAGCACCCCCAAAGGTA...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCATGCATGCAATTCAATaGAGCCTTAGCATGGCATTG +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFMHAIQ*SLSMAL
Trigger: CAATGCCATGCTAAGGCTGCATTGAATTGCATGCAT...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTCAACTTTCCCTATCTTaGTTAAGATGTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: RNARVTRCGAMESFLNEIQLSLS*LRCFQC
Trigger: ACATTGGAAACATCTTAAGCAAGATAGGGAAAGTTG...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAAATGGATTGAGTTCTaGCTTTTAAGGAAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIKWIEF*LLRKGY
Trigger: GTAACCTTTCCTTAAAAGGCAGAACTCAATCCATTT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATATTATGCAGATGCTTTaGTTCCTTCTGGGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHIMQML*FLLGCL
Trigger: CAAACAGCCCAGAAGGAAGCAAAGCATCTGCATAAT...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACACTCAGATTCAGGAACTaGATATCTAAGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: KESKQKTVDILGFQSSATLRFRN*ISKKIR
Trigger: ACGGATCTTCTTAGATATCCAGTTCCTGAATCTGAG...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACAATCAAGTGCCACATaGTCTCTGGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSQSSAT*SLDECL
Trigger: GAGACATTCATCCAGAGACCATGTGGCACTTGATTG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTAGACAGTCGACATTCTaGGGTTTCAATCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRQSTF*GFNQVP
Trigger: TGGCACTTGATTGAAACCCCAGAATGTCGACTGTCT...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAGTACTGAAAACATCATaGGCATGGTTCCCAAAGATG +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRVLKTS*AWFPKM
Trigger: CATCTTTGGGAACCATGCCCATGATGTTTTCAGTAC...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGCTATTTCTTGCCATaGACCACACACTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSSYFLP*TTHSCL
Trigger: AAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCTCTCTCATTTGTCTCTaGAAAATTGCCTTTGGTCGT +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFSLICL*KIAFGR
Trigger: ACGACCAAAGGCAATTTTTCAGAGACAAATGAGAGA...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATTCTCTCATTTGTCTCTaGAAAATTGCCTTTGGTCGT +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHSLICL*KIAFGR
Trigger: ACGACCAAAGGCAATTTTTCAGAGACAAATGAGAGA...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATGAAAACCAGCAGACTTaGAACAATTCCAGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHENQQT*NNSREN
Trigger: ATTCTCTCTGGAATTGTTTCAAGTCTGCTGGTTTTC...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCCAAGCTAAAGAGGGTTaGGTGTGTGCATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFQAKEG*VCAFLK
Trigger: CTTTAAAAATGCACACACTCAACCCTCTTTAGCTTG...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CCA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATTCTCTTCTCCCACGTaGATCTTCCAGATACAATCT +
Preference number: 4 (lower is better)
Translates to: TFDKESKQKTVDILGFQSFSSPT*IFQIQS
Trigger: AGATTGTATCTGGAAGATCCACGTGGGAGAAGAGAA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
3UTR CAA 72 bp CACCCAATTCTTCATTGGAACTCTCAAATCTCTCATTaGTCTCTGAAAAATTGCCTTTGGTCGTTTATCACC +
Preference number: 4 (lower is better)
Translates to: HPILHWNSQISH*SLKNCLWSFIT
Trigger: GGTGATAAACGACCAAAGGCAATTTTTCAGAGACAAATGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR TCA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTGTTCAAAACTGTCTTaGTTAACTTTACACACGGGC +
Preference number: 4 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGCSKLS*LTLHTG
Trigger: GCCCGTGTGTAAAGTTAATCAAGACAGTTTTGAACA...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS-3UTR GCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGACAACTTTCCCTATCTTaGTTAAGATGTTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRQLSLS*LRCFQC
Trigger: ACATTGGAAACATCTTAAGCAAGATAGGGAAAGTTG...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR GCA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAAAATGGATTGAGTTCTaGCTTTTAAGGAAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRKWIEF*LLRKGY
Trigger: GTAACCTTTCCTTAAAAGGCAGAACTCAATCCATTT...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS CCA 90 bp GGTCCAGCCAAAGGGGCACTTCTGATGCCTCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTGGGCCAGGCTTCTCCGTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GPAKGALLMPPRRPR*GPGPPVGQASPWRR
Trigger: CCTCCTCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGGCTGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 90 bp GGGCGGGCCTCCTCTGGAAGCAGCGGTGACAGGGCTGGGATGTCGTaGTGTGCAGAGGGTGCGGTCCCATCCAGCACCAGCTCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GRASSGSSGDRAGMS*CAEGAVPSSTSSPS
Trigger: GCTGGGCGAGCTGGTGCTGGATGGGACCGCACCCTCTGCACATCACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAGGAGGCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACGGGGGCAAGGCGTGCTaGGGGCGGGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHGGKAC*GRASSG
Trigger: TCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCCC...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS GCA 90 bp GGGGCGCTGTTACCACTCTCTCTTCAGGGTGCTCTTTGCCAGGACTaGCTCTCTCCGGGGCTCCTGAGGGCAGGAGGTAAGGACCCAAAG +
Preference number: 5 (lower is better)
Translates to: GALLPLSLQGALCQD*LSPGLLRAGGKDPK
Trigger: CTTTGGGTCCTTACCTCCTGCCCTCAGGAGCCCCGGAGAGAGGCAGTCCTGGCAAAGAGCACCCTGAAGAGAGAGTGGTAACAGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 90 bp GCCCCTCCACAAGGAGCTGAGCAGATGGGCTCCTGGCTGCTCCAGTaGGGCTTGGAGGCATTGATGCATGTCAGCATCTTAGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: APPQGAEQMGSWLLQ*GLEALMHVSILAPW
Trigger: CCAGGGCGCTAAGATGCTGACATGCATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTCAGCTCCTTGTGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp GGCCGTCGTCCTGGAAGGTCCGGAAGTAGACGGAGATGGTGTTGGTaGGGCTTCGGATTACCTGCCCCTCCACCAGGAGTGTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GRRPGRSGSRRRWCW*GFGLPAPPPGVSGW
Trigger: CCAACCAGACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCCCACCAACACCATCTCCGTCTACTTCCGGACCTTCCAGGACGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp GCTGCCGCTTCTGCTACTTTACACACGGGCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATG +
Preference number: 5 (lower is better)
Translates to: AAASATLHTGRGPFQ*DGCPRMQRMVTSPM
Trigger: CATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGTAGCAGAAGCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS CCA 90 bp TGCCGCTTCTGCTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: CRFCFTHGQGPVPVG*LSQDAADGHFTHEL
Trigger: GAGCTCATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGCAGAAGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS CCA 90 bp TCTGCTGCCGCTTCTGCTTTACACACGGGCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATG +
Preference number: 5 (lower is better)
Translates to: SAAASALHTGRGPFQ*DGCPRMQRMVTSPM
Trigger: CATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGCAGAAGCGGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS CCA 90 bp TGCTGCCGCTTCTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: CCRFFTHGQGPVPVG*LSQDAADGHFTHEL
Trigger: GAGCTCATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGAAGCGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529632.6
CDS CCA 90 bp GTCTCTGCTGCCGCTTCTTTACACACGGGCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATG +
Preference number: 5 (lower is better)
Translates to: VSAAASLHTGRGPFQ*DGCPRMQRMVTSPM
Trigger: CATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGAAGCGGCAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529632.6
CDS GCA 90 bp CAGTATGGGTCCCGCACATTGATGCATTCGATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGGTCGCAGGTGAACTCCACTATAGTC +
Preference number: 5 (lower is better)
Translates to: QYGSRTLMHSMMAGP*SREWPGSQVNSTIV
Trigger: GACTATAGTGGAGTTCACCTGCGACCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCATCGAATGCATCAATGTGCGGGACCCATACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp CCAGGGACTCCTCCGAAACGCAGTGGGGCAGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGCTGTAGCAGGTCAGAAGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: PGTPPKRSGAGETSR*ESLFHGCSRSEENS
Trigger: GGAGTTCTCTTCTGACCTGCTACAGCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCCTGCCCCACTGCGTTTCGGAGGAGTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp CGCTTCTGCTACTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: RFCYFTHGQGPVPVG*LSQDAADGHFTHEL
Trigger: GAGCTCATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGTAGCAGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS CCA 90 bp TCAAACGCTTCAAATCGGATGTTGAAGGTGGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATGCGGATGGTGTTGCCTTCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SNASNRMLKVEAARA*SDVNSMRMVLPSLS
Trigger: GCTGAGCGAAGGCAACACCATCCGCATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGCGTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp CTGCTGCCGCTTCTGAAACGCAGTGGGGCAGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGCTGTAGCAGGTCAGAAGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: LLPLLKRSGAGETSR*ESLFHGCSRSEENS
Trigger: GGAGTTCTCTTCTGACCTGCTACAGCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCCTGCCCCACTGCGTTTCAGAAGCGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403121.5
CDS CCA 90 bp CTGCCGCTTCTGCTAAAACGCAGTGGGGCAGGCGAGACGTCCAGATaGGAGTCCCTGTTTCACGGCTGTAGCAGGTCAGAAGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: LPLLLKRSGAGETSR*ESLFHGCSRSEENS
Trigger: GGAGTTCTCTTCTGACCTGCTACAGCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCCTGCCCCACTGCGTTTTAGCAGAAGCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343706.8
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGGGGGCAAGGCGTGCTaGGGGCGGGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRGGKAC*GRASSG
Trigger: TCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCCC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGGGGGCAAGGCGTGCTaGGGGCGGGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSGGKAC*GRASSG
Trigger: TCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCCC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGGGGGGCAAGGCGTGCTaGGGGCGGGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWGGKAC*GRASSG
Trigger: TCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCCC...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGGGGGCAAGGCGTGCTaGGGGCGGGCCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLGGKAC*GRASSG
Trigger: TCCAGAGGAGGCCCGCCCCAAGCACGCCTTGCCCCC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS CCA 90 bp CCCTGGCCCTTTCCAAAGATGAGGCCAGCAGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTGGAGGAGTACAGTTTCTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PWPFPKMRPAGSEWN*MVKSGVEEYSFWGP
Trigger: TGGCCCCCAGAAACTGTACTCCTCCACGCCAGACTTAACCATCCAGTTCCATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp GTCTTGATTAACTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACCCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: VLINFTHGQGPVPVG*LSQDAADGHFTHEL
Trigger: GAGCTCATGGGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGTTAATCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS-3UTR CAA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQSEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAACTCGAAGGGCATTTTaGCCTGAGGCCCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQTRRAF*PEARAS
Trigger: TGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAGT...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS CCA 90 bp TACCTACTGGGGGCCCAATTCATTAAACAGGACTCACAAACGCAGTaGGGCAGGCGAGACGTCCAGATGGGAGTCCCTGTTTCACGGCTG +
Preference number: 5 (lower is better)
Translates to: YLLGAQFIKQDSQTQ*GRRDVQMGVPVSRL
Trigger: CAGCCGTGAAACAGGGACTCCCATCTGGACGTCTCGCCTGCCCCACTGCGTTTGTGAGTCCTGTTTAATGAATTGGGCCCCCAGTAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483291.1
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCTGGGACCCTGCCCTTaGGACAGTGGCTGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPLGPCP*DSGCGG
Trigger: ACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCAG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCTGGGACCCTGCCCTTaGGACAGTGGCTGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFLGPCP*DSGCGG
Trigger: ACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCAG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACTGTTTTCAGGGTAACTaGGGGAGAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHCFQGN*GRGRGR
Trigger: TCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACA...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS CCA 90 bp GTAGAGTCGCTTGTACAGGATTTGGTATCCATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGACTCCTCCGAAACGCAGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: VESLVQDLVSIFRQP*VVTCQGLLRNAVGQ
Trigger: CTGCCCCACTGCGTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTACAAGCGACTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: YADALLPSGLFGSLQSYQAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTGGGACCCTGCCCTTaGGACAGTGGCTGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSLGPCP*DSGCGG
Trigger: ACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCAG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACTGGGACCCTGCCCTTaGGACAGTGGCTGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSLGPCP*DSGCGG
Trigger: ACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCAG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACTGGGACCCTGCCCTTaGGACAGTGGCTGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRLGPCP*DSGCGG
Trigger: ACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCAG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGCTGGGACCCTGCCCTTaGGACAGTGGCTGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWLGPCP*DSGCGG
Trigger: ACCTCCGCAGCCACTGTCCAAAGGGCAGGGTCCCAG...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGGCCGGCGGGGAAAGTaGCAGCTCAGCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKGRRGK*QLSMKA
Trigger: GGCCTTCATGCTGAGCTGCAACTTTCCCCGCCGGCC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGGGCCGGCGGGGAAAGTaGCAGCTCAGCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QSSATWSLDECLEEIVVEGRRGK*QLSMKA
Trigger: GGCCTTCATGCTGAGCTGCAACTTTCCCCGCCGGCC...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGGCCGGCGGGGAAAGTaGCAGCTCAGCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLGRRGK*QLSMKA
Trigger: GGCCTTCATGCTGAGCTGCAACTTTCCCCGCCGGCC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGGCCGGCGGGGAAAGTaGCAGCTCAGCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSGRRGK*QLSMKA
Trigger: GGCCTTCATGCTGAGCTGCAACTTTCCCCGCCGGCC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCTGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPCGLEA*MHVSIL
Trigger: TAAGATGCTGACATGCATCAATGCCTCCAAGCCGCA...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGCCTTAGCATGGCATaGCTGATGGGAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPSLSMA*LMGETP
Trigger: TGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS GCA 90 bp GGAGAAAAGACACCAGTTAGTTTGGGGAGATTTAGGACCTTCACCTaGTGTCAGACTCTGAGGGTGGCCCTCCTAAGGGCGGTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GEKTPVSLGRFRTFT*CQTLRVALLRAVPK
Trigger: TTTGGGCACCGCCCTTAGGAGGGCCACCCTCAGAGTCTGACAGCAGGTGAAGGTCCTAAATCTCCCCAAACTAACTGGTGTCTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS CCA 90 bp GGACACTCTCGGTTTGAAGGGAGTCGTAGAGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCGTCATCCTGTCCTTGTCATGCAGCA +
Preference number: 5 (lower is better)
Translates to: GHSRFEGSRREELTC*SARCEPSSCPCHAA
Trigger: TGCTGCATGACAAGGACAGGATGACGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGACTCCCTTCAAACCGAGAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTGCGGAGGTGGCCTaGGGCCTCAGCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVAAEVA*GLSCFL
Trigger: CAGGAAGCAGCTGAGGCCCAAGGCCACCTCCGCAGC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGGCCGGCGGGGAAAGTaGCAGCTCAGCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSGRRGK*QLSMKA
Trigger: GGCCTTCATGCTGAGCTGCAACTTTCCCCGCCGGCC...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCGGCCGATGGTGGCATaGTGCACTGCCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSRPMVA*CTAPPQ
Trigger: TTGTGGAGGGGCAGTGCACAATGCCACCATCGGCCG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGACGGCCGATGGTGGCATaGTGCACTGCCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRRPMVA*CTAPPQ
Trigger: TTGTGGAGGGGCAGTGCACAATGCCACCATCGGCCG...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGGCCGATGGTGGCATaGTGCACTGCCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPRPMVA*CTAPPQ
Trigger: TTGTGGAGGGGCAGTGCACAATGCCACCATCGGCCG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLRARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRRARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPRARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVRARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCGGGGTTGCAGGTGTATaGGATGGTGGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFGVAGV*DGGPHQ
Trigger: CTGGTGGGGACCACCATCCAATACACCTGCAACCCC...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKSGSPG*SHARDS
Trigger: GGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPSGSPG*SHARDS
Trigger: GGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGA...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGATGCTGTTTTGTGTTTTaGCTGCCGCGGTTTGCCATT +
Preference number: 5 (lower is better)
Translates to: PVCLSKPLTVTTMSPVPGCCFVF*LPRFAI
Trigger: AATGGCAAACCGCGGCAGCAAAAACACAAAACAGCA...TCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS TCA 90 bp AGCCAGTGTAGACTGTCACGTTGTATGTGCACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGTCGCTGGAGTCAATGTACCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SQCRLSRCMCTPESC*GAAVGSRWSQCTPQ
Trigger: CTGAGGGGTACATTGACTCCAGCGACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCACATACAACGTGACAGTCTACACTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 90 bp CTCAAAAGGGACACTCTCGGTTTGAAGGGAGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCTGTGAACCGTCATCCTGTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LKRDTLGLKGVVEKS*LVGLPAVNRHPVLV
Trigger: GACAAGGACAGGATGACGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCTTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLTRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSTRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSTRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTC +
Preference number: 5 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALLLQCG*EALMHV
Trigger: GACATGCATCAATGCCTCCAAGCCGCACTGGAGCAG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCGGCCGATGGTGGCATaGTGCACTGCCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSRPMVA*CTAPPQ
Trigger: TTGTGGAGGGGCAGTGCACAATGCCACCATCGGCCG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGTTTTCAGGGTAACTaGGGGAGAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPCFQGN*GRGRGR
Trigger: TCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTGTTTTCAGGGTAACTaGGGGAGAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFCFQGN*GRGRGR
Trigger: TCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACA...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTGTTTTCAGGGTAACTaGGGGAGAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALCFQGN*GRGRGR
Trigger: TCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGCTTCAAATCGGATGTaGAAGGTGGAGGCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKASNRM*KVEAAR
Trigger: CCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGCTTCAAATCGGATGTaGAAGGTGGAGGCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRASNRM*KVEAAR
Trigger: CCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGCTTCAAATCGGATGTaGAAGGTGGAGGCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPASNRM*KVEAAR
Trigger: CCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVARARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCGGGGTTGCAGGTGTATaGGATGGTGGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVGVAGV*DGGPHQ
Trigger: CTGGTGGGGACCACCATCCAATACACCTGCAACCCC...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGGGGTTGCAGGTGTATaGGATGGTGGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLGVAGV*DGGPHQ
Trigger: CTGGTGGGGACCACCATCCAATACACCTGCAACCCC...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGGGTTGCAGGTGTATaGGATGGTGGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGVAGV*DGGPHQ
Trigger: CTGGTGGGGACCACCATCCAATACACCTGCAACCCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTGGGGTTGCAGGTGTATaGGATGGTGGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSGVAGV*DGGPHQ
Trigger: CTGGTGGGGACCACCATCCAATACACCTGCAACCCC...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVASGSPG*SHARDS
Trigger: GGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSSGSPG*SHARDS
Trigger: GGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp TGTCACGTTGTATGTGCACTCCAGAAAGTTGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAATGTACCCCTCAGGATTGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: CHVVCALQKVVEGQQ*VVAGVNVPLRIGEA
Trigger: AGCTTCTCCAATCCTGAGGGGTACATTGACTCCAGCGACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCACATACAACGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 90 bp ATAAATCCCTGGCCCTTTCCAAAGATGAGGCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCTGGCGTGGAGGAGTACAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: INPWPFPKMRPAGSE*NWMVKSGVEEYSFW
Trigger: CCAGAAACTGTACTCCTCCACGCCAGACTTAACCATCCAGTTCCATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCCAGGGATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLSEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLSEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSSEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: YADALLPSGLFGSLQSYQTRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSTRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVATRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTC +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLLLQCG*EALMHV
Trigger: GACATGCATCAATGCCTCCAAGCCGCACTGGAGCAG...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCCGGCCGATGGTGGCATaGTGCACTGCCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRPMVA*CTAPPQ
Trigger: TTGTGGAGGGGCAGTGCACAATGCCACCATCGGCCG...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATGTTTTCAGGGTAACTaGGGGAGAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRCFQGN*GRGRGR
Trigger: TCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVRARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGCAGGAGTCATTCCTaGATACCTCTATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: CARLSVQAIDCHHHVTGPSRSHS*IPLCSS
Trigger: TGAACTACATAGAGGTATCAAGGAATGACTCCTGCT...GGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACTCGAAGGGCATTTTaGCCTGAGGCCCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLTRRAF*PEARAS
Trigger: TGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAGT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCSEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAACCAGGAGTGTCTGGTaGGCCAGGACGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVTRSVW*ARTVRV
Trigger: TACCCTGACCGTCCTGGCCAACCAGACACTCCTGGT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTC +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLLLQCG*EALMHV
Trigger: GACATGCATCAATGCCTCCAAGCCGCACTGGAGCAG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTC +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSLLQCG*EALMHV
Trigger: GACATGCATCAATGCCTCCAAGCCGCACTGGAGCAG...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTC +
Preference number: 5 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCLLQCG*EALMHV
Trigger: GACATGCATCAATGCCTCCAAGCCGCACTGGAGCAG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTGTTTTCAGGGTAACTaGGGGAGAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVACFQGN*GRGRGR
Trigger: TCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: PHGLWMNVSRRLWLSSQVTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...GACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGGGTTGCAGGTGTATaGGATGGTGGTCCCCACCAG +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGVAGV*DGGPHQ
Trigger: CTGGTGGGGACCACCATCCAATACACCTGCAACCCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCGCGGTTTGCCATTTaGCAAGTCTTCCACCTGCCT +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSPRFAI*QVFHLP
Trigger: AGGCAGGTGGAAGACTTGCAAAATGGCAAACCGCGG...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CCCGTCTGTCTGTCCAAGCCATTGACTGTCACCACCATGTCACCGGTCCCAGGATCACCCAATTCTTCATaGGAACTCTCAAATCTCTCA +
Preference number: 5 (lower is better)
Translates to: PVCLSKPLTVTTMSPVPGSPNSS*ELSNLS
Trigger: TGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTGA...TCCTGGGACCGGTGACATGGTGGTGACAGTCAATGGCTTGGACAGACAGACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTACTCGAAGGGCATTTTaGCCTGAGGCCCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVATRRAF*PEARAS
Trigger: TGAGGCACGGGCCTCAGGCAAAAATGCCCTTCGAGT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS TCA 90 bp GAAGGCCTCCTAGCAGCCCAGCCTTCCATCATGAACAAGAGAAAGTaGATCTGCTTCTACCTACTGGGGGCCCAATTCATTAAACAGGAC +
Preference number: 5 (lower is better)
Translates to: EGLLAAQPSIMNKRK*ICFYLLGAQFIKQD
Trigger: GTCCTGTTTAATGAATTGGGCCCCCAGTAGGTAGAAGCAGATTCACTTTCTCTTGTTCATGATGGAAGGCTGGGCTGCTAGGAGGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483291.1
CDS-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: IPLPNDPPHPILHWNSQISEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATATGTACCCCTCAGGATaGGAGAAGCTCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYMYPSG*EKLTLQ
Trigger: CTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACAT...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCATGTACCCCTCAGGATaGGAGAAGCTCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPMYPSG*EKLTLQ
Trigger: CTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACAT...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATGTACCCCTCAGGATaGGAGAAGCTCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLMYPSG*EKLTLQ
Trigger: CTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACAT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTTGTTATCTTTCTCCAAACATGACATTGTCCACTAATGGCCTAGAACACTTCGGCCGGCGGGGAAAGTaGCAGCTCAGCATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: CCYLSPNMTLSTNGLEHFGRRGK*QLSMKA
Trigger: GGCCTTCATGCTGAGCTGCAACTTTCCCCGCCGGCC...GAAGTGTTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGAAAGATAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPCGLEA*MHVSIL
Trigger: TAAGATGCTGACATGCATCAATGCCTCCAAGCCGCA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTC +
Preference number: 5 (lower is better)
Translates to: RNARVTRCGAMESFLNEILLQCG*EALMHV
Trigger: GACATGCATCAATGCCTCCAAGCCGCACTGGAGCAG...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGAGGGACACTCTCGGTTaGAAGGGAGTCGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLRDTLG*KGVVEK
Trigger: CTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCT...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCAGGGACACTCTCGGTTaGAAGGGAGTCGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPRDTLG*KGVVEK
Trigger: CTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCT...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCTATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAGCACAAAACCGGGGTaGCAGGTGTATTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSSTKPG*QVYWMV
Trigger: CACCATCCAATACACCTGCAACCCCGGTTTTGTGCT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGAGCACAAAACCGGGGTaGCAGGTGTATTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: QSSATWSLDECLEEIVVESTKPG*QVYWMV
Trigger: CACCATCCAATACACCTGCAACCCCGGTTTTGTGCT...CTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAGCACAAAACCGGGGTaGCAGGTGTATTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLSTKPG*QVYWMV
Trigger: CACCATCCAATACACCTGCAACCCCGGTTTTGTGCT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: DKESKQKTVDILGFQSSASGSPG*SHARDS
Trigger: GGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GKYILKMTPFRESVHLSLSGSPG*SHARDS
Trigger: GGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGA...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGCCGCGGTTTGCCATTTaGCAAGTCTTCCACCTGCCT +
Preference number: 5 (lower is better)
Translates to: YADALLPSGLFGSLQSYQPRFAI*QVFHLP
Trigger: AGGCAGGTGGAAGACTTGCAAAATGGCAAACCGCGG...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAACTTTCCAACCTAATCTaGGGACTTAGATTTGTACTG +
Preference number: 5 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQLSNLI*GLRFVL
Trigger: CAGTACAAATCTAAGTCCCAAGATTAGGTTGGAAAG...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCCTTAGACCCCCAAGATaGAAGTCTGAGTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPLRPPR*KSEFLL
Trigger: CAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAAG...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCGCATTAAATGGGGCTTaGGGTCCTGGAAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPALNGA*GPGKQP
Trigger: AGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGC...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAACAATCACACTGTACATaGTTGAACTCGTATGATCTG +
Preference number: 5 (lower is better)
Translates to: WEGTKEGSKCHCARLSVQQSHCT*LNSYDL
Trigger: CAGATCATACGAGTTCAACAATGTACAGTGTGATTG...TTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKCGLEA*MHVSIL
Trigger: TAAGATGCTGACATGCATCAATGCCTCCAAGCCGCA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTTGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSCGLEA*MHVSIL
Trigger: TAAGATGCTGACATGCATCAATGCCTCCAAGCCGCA...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLCGLEA*MHVSIL
Trigger: TAAGATGCTGACATGCATCAATGCCTCCAAGCCGCA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCCGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VSRRLWLSSQVPFSSVALRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...GAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTACCGTCATCCTGTCCTaGTCATGCAGCAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLTVILS*SCSNSL
Trigger: GAGGCTGTTGCTGCATGACAAGGACAGGATGACGGT...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTAGGGACACTCTCGGTTaGAAGGGAGTCGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVARDTLG*KGVVEK
Trigger: CTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCGCTTCAAATCGGATGTaGAAGGTGGAGGCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: DKESKQKTVDILGFQSSAASNRM*KVEAAR
Trigger: CCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGC...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGTATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: YADALLPSGLFGSLQSYQYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAG +
Preference number: 5 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHRARAS*GTIPPQ
Trigger: CTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCT...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: ECLEEIVVEFTSPLLKCSSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...GCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCATCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTTCGAGGAGATTGTGGTaGAGTTCACAAGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSSRRLW*SSQVPF
Trigger: GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGA...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGGCTGTAACATGAATTaGGCTGAGGCCGCGAAACAT +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSGCNMN*AEAAKH
Trigger: ATGTTTCGCGGCCTCAGCCAAATTCATGTTACAGCC...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTCCGCGGTTTGCCATTTaGCAAGTCTTCCACCTGCCT +
Preference number: 5 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSPRFAI*QVFHLP
Trigger: AGGCAGGTGGAAGACTTGCAAAATGGCAAACCGCGG...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTTTGCTGCCGCGGTTaGCCATTTTGCAAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKFCCRG*PFCKSS
Trigger: GGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAAA...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAACTCCATCTGCTGTTTaGTGTTTTTGCTGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRTPSAV*CFCCRG
Trigger: ACCGCGGCAGCAAAAACACAAAACAGCAGATGGAGT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAGCCTTAGCATGGCATaGCTGATGGGAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLSLSMA*LMGETP
Trigger: TGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATTCCAGAGAGAATGGGAGGGCACCAAAGAGGGTTCCAAATGCCACTGTGCCCGGTTTATATAACACCTTaGCTACCTTCAGAAGAACCG +
Preference number: 5 (lower is better)
Translates to: IPERMGGHQRGFQMPLCPVYITP*LPSEEP
Trigger: CGGTTCTTCTGAAGGTAGCAAAGGTGTTATATAAAC...CGGGCACAGTGGCATTTGGAACCCTCTTTGGTGCCCTCCCATTCTCTCTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGCAGCTTGAGAGTGGCTaGCTGAACATGGTGATCGAT +
Preference number: 5 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLQLESG*LNMVID
Trigger: ATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTG...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTTGTCTGTCCAAGCCATaGACTGTCACCACCATGTCA +
Preference number: 5 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPCLSKP*TVTTMS
Trigger: TGACATGGTGGTGACAGTCAATGGCTTGGACAGACA...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCACGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCAGGGACACTCTCGGTTaGAAGGGAGTCGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGRDTLG*KGVVEK
Trigger: CTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCT...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAGGGACACTCTCGGTTaGAAGGGAGTCGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIRDTLG*KGVVEK
Trigger: CTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGCCAGAGTGGTAAAAGACAATGTTTATATAACACCTTTGCTACCTTCAGAAGAGCTTCAAATCGGATGTaGAAGGTGGAGGCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: GQSGKRQCLYNTFATFRRASNRM*KVEAAR
Trigger: CCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGC...TCTTCTGAAGGTAGCAAAGGTGTTATATAAACATTGTCTTTTACCACTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGGTCAAGATGTCACTGTaGCTCAGATTCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: LDECLEEIVVEFTSPLLKVKMSL*LRFRNW
Trigger: CCAGTTCCTGAATCTGAGCAACAGTGACATCTTGAC...CTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTGTCAAGATGTCACTGTaGCTCAGATTCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPVKMSL*LRFRNW
Trigger: CCAGTTCCTGAATCTGAGCAACAGTGACATCTTGAC...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAGTCAAGATGTCACTGTaGCTCAGATTCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRVKMSL*LRFRNW
Trigger: CCAGTTCCTGAATCTGAGCAACAGTGACATCTTGAC...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGGTCAAGATGTCACTGTaGCTCAGATTCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLVKMSL*LRFRNW
Trigger: CCAGTTCCTGAATCTGAGCAACAGTGACATCTTGAC...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGTCAAGATGTCACTGTaGCTCAGATTCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSVKMSL*LRFRNW
Trigger: CCAGTTCCTGAATCTGAGCAACAGTGACATCTTGAC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAAGCACAAAACCGGGGTaGCAGGTGTATTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVSTKPG*QVYWMV
Trigger: CACCATCCAATACACCTGCAACCCCGGTTTTGTGCT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTAGCACAAAACCGGGGTaGCAGGTGTATTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSSTKPG*QVYWMV
Trigger: CACCATCCAATACACCTGCAACCCCGGTTTTGTGCT...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248933.11
ENST00000529632.6
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFNVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGTTTTGCTGCCGCGGTTaGCCATTTTGCAAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLFCCRG*PFCKSS
Trigger: GGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAAA...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTTTTTGCTGCCGCGGTTaGCCATTTTGCAAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSFCCRG*PFCKSS
Trigger: GGAAGACTTGCAAAATGGCAAACCGCGGCAGCAAAA...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTTGCTGTTTTGTGTTTTaGCTGCCGCGGTTTGCCATT +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLCCFVF*LPRFAI
Trigger: AATGGCAAACCGCGGCAGCAAAAACACAAAACAGCA...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTACTCCATCTGCTGTTTaGTGTTTTTGCTGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: WMNVSRRLWLSSQVPFSSTPSAV*CFCCRG
Trigger: ACCGCGGCAGCAAAAACACAAAACAGCAGATGGAGT...ACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGCCTTAGCATGGCATaGCTGATGGGAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLSLSMA*LMGETP
Trigger: TGGAGTTTCTCCCATCAGCAATGCCATGCTAAGGCT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAAACGTTTTCTTGTTTaGTCACTGTCCAGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSKRFLV*SLSSEA
Trigger: GGCCTCGCTGGACAGTGACAAAACAAGAAAACGTTT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GAGGGTTCCAAATGCCACTGTGCCCGTCTGTCTGTCCAAGCCATTGACTGTCACTTTGTCTCTGAAAAATaGCCTTTGGTCGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: EGSKCHCARLSVQAIDCHFVSEK*PLVVYH
Trigger: GTGATAAACGACCAAAGGCAATTTTTCAGAGACAAA...GTGACAGTCAATGGCTTGGACAGACAGACGGGCACAGTGGCATTTGGAACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACTACTTGTTATACAACCCTCCTGATTATGCAGATGCTTTGCTTCCTTCTGGGCGCATTAAATGGGGCTTaGGGTCCTGGAAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TTCYTTLLIMQMLCFLLGALNGA*GPGKQP
Trigger: AGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGC...GCCCAGAAGGAAGCAAAGCATCTGCATAATCAGGAGGGTTGTATAACAAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATTTCCTTCTGGGCTGTTaGGCAGTCTTCAAAGCTATC +
Preference number: 5 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYFLLGC*AVFKAI
Trigger: GATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAA...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTTCCTTCTGGGCTGTTaGGCAGTCTTCAAAGCTATC +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLFLLGC*AVFKAI
Trigger: GATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTGGAGAATGCCTACCTTaGGGGGTGCTGAACAACTCA +
Preference number: 5 (lower is better)
Translates to: RNARVTRCGAMESFLNEIGECLP*GVLNNS
Trigger: TGAGTTGTTCAGCACCCCCAAAGGTAGGCATTCTCC...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTGGAGAATGCCTACCTTaGGGGGTGCTGAACAACTCA +
Preference number: 5 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLGECLP*GVLNNS
Trigger: TGAGTTGTTCAGCACCCCCAAAGGTAGGCATTCTCC...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGCGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGCTTCAAATCGGATGTaGAAGGTGGAGGCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSASNRM*KVEAAR
Trigger: CCGGGCGGCCTCCACCTTCAACATCCGATTTGAAGC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAGCAGGAGTCATTCCTaGATACCTCTATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFSRSHS*IPLCSS
Trigger: TGAACTACATAGAGGTATCAAGGAATGACTCCTGCT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTTCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSSLVQD*VSIFRQ
Trigger: CTGCCTGAAAATGGATACCAAATCCTGTACAAGCGA...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLSLVQD*VSIFRQ
Trigger: CTGCCTGAAAATGGATACCAAATCCTGTACAAGCGA...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GFNQVPHGLWMNVSRRLWSLVQD*VSIFRQ
Trigger: CTGCCTGAAAATGGATACCAAATCCTGTACAAGCGA...CCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLNVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp TGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: WSLDECLEEIVVEFTSPLNVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...AAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGGCTGTAACATGAATTaGGCTGAGGCCGCGAAACAT +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVGCNMN*AEAAKH
Trigger: ATGTTTCGCGGCCTCAGCCAAATTCATGTTACAGCC...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAACTCCATCTGCTGTTTaGTGTTTTTGCTGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVTPSAV*CFCCRG
Trigger: ACCGCGGCAGCAAAAACACAAAACAGCAGATGGAGT...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TATGCAGATGCTTTGCTTCCTTCTGGGCTGTTTGGCAGTCTTCAAAGCTATCAGAAACGTTTTCTTGTTTaGTCACTGTCCAGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: YADALLPSGLFGSLQSYQKRFLV*SLSSEA
Trigger: GGCCTCGCTGGACAGTGACAAAACAAGAAAACGTTT...CTGATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAAGCAAAGCATCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCAGAGAATCAGTGCACTaGAGTCTCCTCTATTTTGAG +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFRESVH*SLLYFE
Trigger: CTCAAAATAGAGGAGACTCAAGTGCACTGATTCTCT...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTGTCTGTCCAAGCCATaGACTGTCACCACCATGTCA +
Preference number: 5 (lower is better)
Translates to: RNARVTRCGAMESFLNEICLSKP*TVTTMS
Trigger: TGACATGGTGGTGACAGTCAATGGCTTGGACAGACA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCTTAGACCCCCAAGATaGAAGTCTGAGTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLLRPPR*KSEFLL
Trigger: CAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAAG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGACACCAGTTAGTTaGGGGAGATTTAGGACCTTC +
Preference number: 5 (lower is better)
Translates to: SLDECLEEIVVEFTSPLLKTPVS*GRFRTF
Trigger: GAAGGTCCTAAATCTCCCCAAACTAACTGGTGTCTT...GAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS CCA 90 bp AATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTaGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTTTAGA +
Preference number: 5 (lower is better)
Translates to: NQVPHGLWMNVSRRL*LSSQVPFSSVALFR
Trigger: TCTAAAGAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSSEGGD*QGCGCC
Trigger: ACAACACCCGCACCCCTGCAAATCTCCCCCTTCACT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAATGTACCCCTCAGGATaGGAGAAGCTCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATMYPSG*EKLTLQ
Trigger: CTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACAT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAGTGCACTCCAGAAAGTaGTTGAGGGGCAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSVHSRK*LRGSSG
Trigger: CCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCAC...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTACGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTCGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGCAGGAGTCATTCCTaGATACCTCTATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LWMNVSRRLWLSSQVPFSSRSHS*IPLCSS
Trigger: TGAACTACATAGAGGTATCAAGGAATGACTCCTGCT...TGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCAGCAGGAGTCATTCCTaGATACCTCTATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: TWSLDECLEEIVVEFTSPSRSHS*IPLCSS
Trigger: TGAACTACATAGAGGTATCAAGGAATGACTCCTGCT...GGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCTTTCCAACCTAATCTaGGGACTTAGATTTGTACTG +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFLSNLI*GLRFVL
Trigger: CAGTACAAATCTAAGTCCCAAGATTAGGTTGGAAAG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTAGAGAATCAGTGCACTaGAGTCTCCTCTATTTTGAG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSRESVH*SLLYFE
Trigger: CTCAAAATAGAGGAGACTCAAGTGCACTGATTCTCT...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGCATTAAATGGGGCTTaGGGTCCTGGAAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATALNGA*GPGKQP
Trigger: AGGCTGCTTTCCAGGACCCAAAGCCCCATTTAATGC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTGCCAAATCACTACTaGTTATACAACCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: HGLWMNVSRRLWLSSQVPLPNHY*LYNPPD
Trigger: ATCAGGAGGGTTGTATAACAAGTAGTGATTTGGCAA...GGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTAAGACACCAGTTAGTTaGGGGAGATTTAGGACCTTC +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAKTPVS*GRFRTF
Trigger: GAAGGTCCTAAATCTCCCCAAACTAACTGGTGTCTT...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS CCA 90 bp TGTCACATGCCAGGGACTCCTCCGTTAGTAAATGATGGACGGTGGTaGTGTTTAATTATGAAATCTTCTTCTTGCTTTTCACCTGACACC +
Preference number: 5 (lower is better)
Translates to: CHMPGTPPLVNDGRW*CLIMKSSSCFSPDT
Trigger: GGTGTCAGGTGAAAAGCAAGAAGAAGATTTCATAATTAAACACCACCACCGTCCATCATTTACTAACGGAGGAGTCCCTGGCATGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVSLVQD*VSIFRQ
Trigger: CTGCCTGAAAATGGATACCAAATCCTGTACAAGCGA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: IPLPNDPPHPILHWNSQINVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCGGCTGTAACATGAATTaGGCTGAGGCCGCGAAACAT +
Preference number: 5 (lower is better)
Translates to: GKYILKMTPFRESVHLSLGCNMN*AEAAKH
Trigger: ATGTTTCGCGGCCTCAGCCAAATTCATGTTACAGCC...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTGTTTATATAACACCTTaGCTACCTTCAGAAGAACCG +
Preference number: 5 (lower is better)
Translates to: CLEEIVVEFTSPLLKCSSVYITP*LPSEEP
Trigger: CGGTTCTTCTGAAGGTAGCAAAGGTGTTATATAAAC...AGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCTGAAAAATTGCCTTaGGTCGTTTATCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFSEKLP*VVYHLS
Trigger: AGAAAGGTGATAAACGACCAAAGGCAATTTTTCAGA...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTCACCCAATTCTTCATaGGAACTCTCAAATCTCTCA +
Preference number: 5 (lower is better)
Translates to: WGFNQVPHGLWMNVSRRLSPNSS*ELSNLS
Trigger: TGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTGA...CAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCCACGCTCTTTCATCATaGAAAGAGTGTCAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: GLWMNVSRRLWLSSQVPFHALSS*KECQRK
Trigger: TTTTCTTTGACACTCTTTCAATGATGAAAGAGCGTG...GAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTGTCTGTCCAAGCCATaGACTGTCACCACCATGTCA +
Preference number: 5 (lower is better)
Translates to: DKESKQKTVDILGFQSSACLSKP*TVTTMS
Trigger: TGACATGGTGGTGACAGTCAATGGCTTGGACAGACA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCCTTAGACCCCCAAGATaGAAGTCTGAGTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: DKESKQKTVDILGFQSSALRPPR*KSEFLL
Trigger: CAGCAGGAACTCAGACTTCAATCTTGGGGGTCTAAG...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTCTCCAAACATGACATaGTCCACTAATGGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVASPNMT*STNGLE
Trigger: TTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAATGTACCCCTCAGGATaGGAGAAGCTCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSMYPSG*EKLTLQ
Trigger: CTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACAT...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTATGTACCCCTCAGGATaGGAGAAGCTCACACTGCAG +
Preference number: 5 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGMYPSG*EKLTLQ
Trigger: CTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACAT...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACACGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATRPDAE*APICVF
Trigger: GAAAACACAAATGGGAGCCAATTCTGCATCTGGACG...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTAGGGACACTCTCGGTTaGAAGGGAGTCGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGRDTLG*KGVVEK
Trigger: CTTCTCTACGACTCCCTTCAAACCGAGAGTGTCCCT...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATATGGGTCCCGCACATaGATGCATTCGATGATGGCC +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSYGSRT*MHSMMA
Trigger: GGCCATCATCGAATGCATCAATGTGCGGGACCCATA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAGTCAAGATGTCACTGTaGCTCAGATTCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATVKMSL*LRFRNW
Trigger: CCAGTTCCTGAATCTGAGCAACAGTGACATCTTGAC...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCTGGGGTTTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGAATGTTCAAAACTGTCTaGATTAACTTTACACACGGG +
Preference number: 5 (lower is better)
Translates to: FWGFNQVPHGLWMNVSRRMFKTV*INFTHG
Trigger: CCCGTGTGTAAAGTTAATCAAGACAGTTTTGAACAT...TCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAAACCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATGCTGTTTTGTGTTTTaGCTGCCGCGGTTTGCCATT +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATCCFVF*LPRFAI
Trigger: AATGGCAAACCGCGGCAGCAAAAACACAAAACAGCA...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTCTTTCCAACCTAATCTaGGGACTTAGATTTGTACTG +
Preference number: 5 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCLSNLI*GLRFVL
Trigger: CAGTACAAATCTAAGTCCCAAGATTAGGTTGGAAAG...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTTCACCCAATTCTTCATaGGAACTCTCAAATCTCTCA +
Preference number: 5 (lower is better)
Translates to: DECLEEIVVEFTSPLLKCSPNSS*ELSNLS
Trigger: TGAGAGATTTGAGAGTTCCAATGAAGAATTGGGTGA...ACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCACGCTCTTTCATCATaGAAAGAGTGTCAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: ATWSLDECLEEIVVEFTSHALSS*KECQRK
Trigger: TTTTCTTTGACACTCTTTCAATGATGAAAGAGCGTG...ACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATCACGCTCTTTCATCATaGAAAGAGTGTCAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYHALSS*KECQRK
Trigger: TTTTCTTTGACACTCTTTCAATGATGAAAGAGCGTG...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GCAGCCTTTAGCTATTTCTTGCCATGGACCACACACTCATGCCTTCAGGAGTATTCAACTTTCCCTATCTaGCTTAAGATGTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: AAFSYFLPWTTHSCLQEYSTFPI*LKMFPM
Trigger: CATTGGAAACATCTTAAGCAAGATAGGGAAAGTTGA...ATACTCCTGAAGGCATGAGTGTGTGGTCCATGGCAAGAAATAGCTAAAGGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp CTGACCTCAAATGACTCGTCATGCCTAGTCAAGGACATAGGAAGATCATGCCCTTCAACTTTCCCTATCTaGCTTAAGATGTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: LTSNDSSCLVKDIGRSCPSTFPI*LKMFPM
Trigger: CATTGGAAACATCTTAAGCAAGATAGGGAAAGTTGA...AGGGCATGATCTTCCTATGTCCTTGACTAGGCATGACGAGTCATTTGAGGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACATTCCTTCTGGGCTGTTaGGCAGTCTTCAAAGCTATC +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATFLLGC*AVFKAI
Trigger: GATAGCTTTGAAGACTGCCAAACAGCCCAGAAGGAA...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSCGLEA*MHVSIL
Trigger: TAAGATGCTGACATGCATCAATGCCTCCAAGCCGCA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATTGTGGTTGATGTTCAAAACTGTCTaGATTAACTTTACACACGGG +
Preference number: 5 (lower is better)
Translates to: FNQVPHGLWMNVSRRLWLMFKTV*INFTHG
Trigger: CCCGTGTGTAAAGTTAATCAAGACAGTTTTGAACAT...CAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: DKESKQKTVDILGFQSSANVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTC +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATNVSRR*WLSSQV
Trigger: GACTTGTGAACTCAACCACAATCTCCTCGAGACATT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTTTTGTCTCTGAAAAATaGCCTTTGGTCGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: NVSRRLWLSSQVPFSSVAFVSEK*PLVVYH
Trigger: GTGATAAACGACCAAAGGCAATTTTTCAGAGACAAA...AGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTCAGCTTGAGAGTGGCTaGCTGAACATGGTGATCGAT +
Preference number: 5 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGQLESG*LNMVID
Trigger: ATCGATCACCATGTTCAGCAAGCCACTCTCAAGCTG...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTTCACACTGTACATTGTaGAACTCGTATGATCTGTCT +
Preference number: 5 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLSHCTL*NSYDLS
Trigger: AGACAGATCATACGAGTTCAACAATGTACAGTGTGA...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp TTAAAACACGGTTACGGGTGTGGTACTACTAAGACAGAACTGAGACACTGGTCTTCACACTGTACATTGTaGAACTCGTATGATCTGTCT +
Preference number: 5 (lower is better)
Translates to: LKHGYGCGTTKTELRHWSSHCTL*NSYDLS
Trigger: AGACAGATCATACGAGTTCAACAATGTACAGTGTGA...AGACCAGTGTCTCAGTTCTGTCTTAGTAGTACCACACCCGTAACCGTGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATTCCCTTACCCAATGATCCCCCTCACCCAATTCTTCATTGGAACTCTCAAATCCAATCACACTGTACATaGTTGAACTCGTATGATCTG +
Preference number: 5 (lower is better)
Translates to: IPLPNDPPHPILHWNSQIQSHCT*LNSYDL
Trigger: CAGATCATACGAGTTCAACAATGTACAGTGTGATTG...GATTTGAGAGTTCCAATGAAGAATTGGGTGAGGGGGATCATTGGGTAAGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ATGAATGTCTCGAGGAGATTGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTATTGCCAAATCACTACTaGTTATACAACCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: MNVSRRLWLSSQVPFSSVLPNHY*LYNPPD
Trigger: ATCAGGAGGGTTGTATAACAAGTAGTGATTTGGCAA...TACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS TCA 90 bp ACGGTGGTGGTGTTTAATTATGAAATCTTCTTCTTGCTTTTCACCTaGCACCTAACCTGCGCATCCATTATGACTACGTCTTGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TVVVFNYEIFFLLFT*HLTCASIMTTSCLS
Trigger: TGAAAGACAAGACGTAGTCATAATGGATGCGCAGGTTAGGTGTCAGGTGAAAAGCAAGAAGAAGATTTCATAATTAAACACCACCACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS-3UTR CAA 90 bp AAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCACAAGCAGGAGTCATTCCTaGATACCTCTATGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: KESKQKTVDILGFQSSATSRSHS*IPLCSS
Trigger: TGAACTACATAGAGGTATCAAGGAATGACTCCTGCT...TGTGGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACAGTAAACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTAAACGTTTTCTTGTTTaGTCACTGTCCAGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: NSKPLIKSLNKRQSTFWGKRFLV*SLSSEA
Trigger: GGCCTCGCTGGACAGTGACAAAACAAGAAAACGTTT...ACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGTTTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GTTCCTGCTGTCAAGGAGGGTACATGTGTGCCTAAAATCAACTTTCCCTATCTTTTTGTCTCTGAAAAATaGCCTTTGGTCGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: VPAVKEGTCVPKINFPYLFVSEK*PLVVYH
Trigger: GTGATAAACGACCAAAGGCAATTTTTCAGAGACAAA...AAGATAGGGAAAGTTGATTTTAGGCACACATGTACCCTCCTTGACAGCAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AGGAATGCCCGTGTGACTAGATGTGGGGCTATGGAATCCTTTCTGAATGAAATTTCAACTTTCCCTATCTaGCTTAAGATGTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: RNARVTRCGAMESFLNEISTFPI*LKMFPM
Trigger: CATTGGAAACATCTTAAGCAAGATAGGGAAAGTTGA...AATTTCATTCAGAAAGGATTCCATAGCCCCACATCTAGTCACACGGGCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCTCTCCAAACATGACATaGTCCACTAATGGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: GKYILKMTPFRESVHLSLSPNMT*STNGLE
Trigger: TTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGA...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSSLVQD*VSIFRQ
Trigger: CTGCCTGAAAATGGATACCAAATCCTGTACAAGCGA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATAGAGAATCAGTGCACTaGAGTCTCCTCTATTTTGAG +
Preference number: 5 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHRESVH*SLLYFE
Trigger: CTCAAAATAGAGGAGACTCAAGTGCACTGATTCTCT...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp AACATGGTGATCGATTCTGGCACTTGTAGCATAAATTACACGCTCTTTCATCATTCTCCAAACATGACATaGTCCACTAATGGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: NMVIDSGTCSINYTLFHHSPNMT*STNGLE
Trigger: TTCTAGGCCATTAGTGGACAATGTCATGTTTGGAGA...ATGATGAAAGAGCGTGTAATTTATGCTACAAGTGCCAGAATCGATCACCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp GGCAAGTATATTCTGAAGATGACACCTTTTAGAGAATCAGTGCACTTGAGTCTCATGTTCAAAACTGTCTaGATTAACTTTACACACGGG +
Preference number: 5 (lower is better)
Translates to: GKYILKMTPFRESVHLSLMFKTV*INFTHG
Trigger: CCCGTGTGTAAAGTTAATCAAGACAGTTTTGAACAT...GAGACTCAAGTGCACTGATTCTCTAAAAGGTGTCATCTTCAGAATATACTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248933.11
CDS-3UTR CAA 90 bp GATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCAAGTGCCTCTGAAAAATTGCCTTaGGTCGTTTATCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: DKESKQKTVDILGFQSSASEKLP*VVYHLS
Trigger: AGAAAGGTGATAAACGACCAAAGGCAATTTTTCAGA...GGCACTTGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCATCACACTGTACATTGTaGAACTCGTATGATCTGTCT +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSSHCTL*NSYDLS
Trigger: AGACAGATCATACGAGTTCAACAATGTACAGTGTGA...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS-3UTR CAA 90 bp ACCTTTGATAAAGAGTCTAAACAAAAGACAGTCGACATTCTGGGGTTTCAATCACAATCACACTGTACATaGTTGAACTCGTATGATCTG +
Preference number: 5 (lower is better)
Translates to: TFDKESKQKTVDILGFQSQSHCT*LNSYDL
Trigger: CAGATCATACGAGTTCAACAATGTACAGTGTGATTG...TGATTGAAACCCCAGAATGTCGACTGTCTTTTGTTTAGACTCTTTATCAAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000529632.6
CDS CCA 72 bp CTCCTCGGAGGCCACGATGGGGTCCGGGTCCCCCGGTaGGCCAGGCTTCTCCGTGGAGGAGGAGAGGAGATC +
Preference number: 6 (lower is better)
Translates to: LLGGHDGVRVPR*ARLLRGGGEEI
Trigger: GATCTCCTCTCCTCCTCCACGGAGAAGCCTGGCCCACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp AAAGGGGCACTTCTGATGCCTCCTCGGAGGCCACGATaGGGTCCGGGTCCCCCGGTGGGCCAGGCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: KGALLMPPRRPR*GPGPPVGQASP
Trigger: CGGAGAAGCCTGGCCCACCGGGGGACCCGGACCCCATCGTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp GGGCTTCGGATTACCTGCCCCTCCACCAGGAGTGTCTaGTTGGCCAGGACGGTCAGGGTAGGGCCGTCCACC +
Preference number: 6 (lower is better)
Translates to: GLRITCPSTRSV*LARTVRVGPST
Trigger: GGTGGACGGCCCTACCCTGACCGTCCTGGCCAACCAGACACTCCTGGTGGAGGGGCAGGTAATCCGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp CGCACTCTCCTTTCGGTCCAGCCAAAGGGGCACTTCTaGTGCCTCCTCGGAGGCCACGATGGGGTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: RTLLSVQPKGHF*CLLGGHDGVRV
Trigger: GACCCGGACCCCATCGTGGCCTCCGAGGAGGCATCAGAAGTGCCCCTTTGGCTGGACCGAAAGGAGAGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp TCCCGCACATTGATGCATTCGATGATGGCCGGGCCCTaGTCCAGGGAGTGGCCGGGGTCGCAGGTGAACTCC +
Preference number: 6 (lower is better)
Translates to: SRTLMHSMMAGP*SREWPGSQVNS
Trigger: GGAGTTCACCTGCGACCCCGGCCACTCCCTGGAGCAGGGCCCGGCCATCATCGAATGCATCAATGTGCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp GGCTTCTCCGTGGAGGAGGAGAGGAGATCTAGGCCCTaGGACGCTGGCTGGGACCCTGCCCTTTGGACAGTG +
Preference number: 6 (lower is better)
Translates to: GFSVEEERRSRP*DAGWDPALWTV
Trigger: CACTGTCCAAAGGGCAGGGTCCCAGCCAGCGTCCCAGGGCCTAGATCTCCTCTCCTCCTCCACGGAGAAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp TCCTCTGGAAGCAGCGGTGACAGGGCTGGGATGTCGTaGTGTGCAGAGGGTGCGGTCCCATCCAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: SSGSSGDRAGMS*CAEGAVPSSTS
Trigger: GCTGGTGCTGGATGGGACCGCACCCTCTGCACATCACGACATCCCAGCCCTGTCACCGCTGCTTCCAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp GGGGCGCTGTTACCACTCTCTCTTCAGGGTGCTCTTTaGCAGGACTGCCTCTCTCCGGGGCTCCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: GALLPLSLQGAL*QDCLSPGLLRA
Trigger: TGCCCTCAGGAGCCCCGGAGAGAGGCAGTCCTGGCAAAGAGCACCCTGAAGAGAGAGTGGTAACAGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp GCCGCTTCTTTACACACGGGCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATGCAGCGGATGGTCACT +
Preference number: 6 (lower is better)
Translates to: AASLHTGRGPFQ*DGCPRMQRMVT
Trigger: AGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529632.6
CDS CCA 72 bp GGCCGTCGTCCTGGAAGGTCCGGAAGTAGACGGAGATaGTGTTGGTGGGGCTTCGGATTACCTGCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: GRRPGRSGSRRR*CWWGFGLPAPP
Trigger: TGGAGGGGCAGGTAATCCGAAGCCCCACCAACACCATCTCCGTCTACTTCCGGACCTTCCAGGACGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp TGCTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACC +
Preference number: 6 (lower is better)
Translates to: CFTHGQGPVPVG*LSQDAADGHFT
Trigger: GGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS CCA 72 bp GCTTCTGCTTTACACACGGGCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATGCAGCGGATGGTCACT +
Preference number: 6 (lower is better)
Translates to: ASALHTGRGPFQ*DGCPRMQRMVT
Trigger: AGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS CAA 72 bp GTGGGCCACATAGGGCTGCGAAGTGAAGGGGGAGATTaGCAGGGGTGCGGGTGTTGTAGGGACCGCACTCTC +
Preference number: 6 (lower is better)
Translates to: VGHIGLRSEGGD*QGCGCCRDRTL
Trigger: GAGAGTGCGGTCCCTACAACACCCGCACCCCTGCAAATCTCCCCCTTCACTTCGCAGCCCTATGTGGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp ATAGCCCAGGTGGCAGTGAAAGTGGGCCACCCCACCTaGGTGCAGGTCCATCACCGTGACATCCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: IAQVAVKVGHPT*VQVHHRDIPRV
Trigger: GACTCTGGGGATGTCACGGTGATGGACCTGCACTCAGGTGGGGTGGCCCACTTTCACTGCCACCTGGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp TTTCAGGGTAACTTGGGGAGAGGACGCGGCCGATGGTaGCATTGTGCACTGCCCCTCCACAAGGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: FQGNLGRGRGRW*HCALPLHKELS
Trigger: GCTCAGCTCCTTGTGGAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp TCAAATCGGATGTTGAAGGTGGAGGCCGCCCGGGCCTaGTCGGACGTGAACTCGATGCGGATGGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: SNRMLKVEAARA*SDVNSMRMVLP
Trigger: AGGCAACACCATCCGCATCGAGTTCACGTCCGACCAGGCCCGGGCGGCCTCCACCTTCAACATCCGATTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp AACTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACC +
Preference number: 6 (lower is better)
Translates to: NFTHGQGPVPVG*LSQDAADGHFT
Trigger: GGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
CDS CCA 72 bp TACTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACC +
Preference number: 6 (lower is better)
Translates to: YFTHGQGPVPVG*LSQDAADGHFT
Trigger: GGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS CCA 72 bp TCTGCTACTTTACACACGGGCAGGGGCCCGTTCCAGTaGGATGGCTGTCCCAGGATGCAGCGGATGGTCACT +
Preference number: 6 (lower is better)
Translates to: SATLHTGRGPFQ*DGCPRMQRMVT
Trigger: AGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGTAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360929.7
ENST00000629590.2
CDS CCA 72 bp TTCTTTACACACGGGCAGGGGCCCGTTCCAGTGGGATaGCTGTCCCAGGATGCAGCGGATGGTCACTTCACC +
Preference number: 6 (lower is better)
Translates to: FFTHGQGPVPVG*LSQDAADGHFT
Trigger: GGTGAAGTGACCATCCGCTGCATCCTGGGACAGCCATCCCACTGGAACGGGCCCCTGCCCGTGTGTAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529632.6
CDS CAA 72 bp GCTGAGCAGATGGGCTCCTGGCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTCAGCATCTTAGCGCCC +
Preference number: 6 (lower is better)
Translates to: AEQMGSWLLQCG*EALMHVSILAP
Trigger: GGGCGCTAAGATGCTGACATGCATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp CCACAAGGAGCTGAGCAGATGGGCTCCTGGCTGCTCCAGTGCGGCTaGGAGGCATTGATGCATGTCAGCATCTTAGCGCCCTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PQGAEQMGSWLLQCG*EALMHVSILAPWSS
Trigger: TGAGCTCCAGGGCGCTAAGATGCTGACATGCATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCATCTGCTCAGCTCCTTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp TTACCACTCTCTCTTCAGGGTGCTCTTTGCCAGGACTaGCTCTCTCCGGGGCTCCTGAGGGCAGGAGGTAAG +
Preference number: 6 (lower is better)
Translates to: LPLSLQGALCQD*LSPGLLRAGGK
Trigger: CTTACCTCCTGCCCTCAGGAGCCCCGGAGAGAGGCAGTCCTGGCAAAGAGCACCCTGAAGAGAGAGTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp GAGTACAGTTTCTGGGGGCCACTGTTCCCAAGGTACTaGCCCAAGATGTGGGGCATGACCTCGTCGCCATCG +
Preference number: 6 (lower is better)
Translates to: EYSFWGPLFPRY*PKMWGMTSSPS
Trigger: CGATGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTACCTTGGGAACAGTGGCCCCCAGAAACTGTACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp TTGGTATCCATTTTCAGGCAGCCCTGGGTTGTCACATaGCAGGGACTCCTCCGAAACGCAGTGGGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LVSIFRQPWVVT*QGLLRNAVGQA
Trigger: CGCCTGCCCCACTGCGTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp CCCCTCAGGATTGGAGAAGCTCACACTGCAGAGAGCTaGTGCCTGCTCGGTGGTGATGACCGTGGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: PLRIGEAHTAES*CLLGGDDRGGD
Trigger: ATCACCACCACGGTCATCACCACCGAGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCAATCCTGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 72 bp ATGGGCTCCTGGCTGCTCCAGTGCGGCTTGGAGGCATaGATGCATGTCAGCATCTTAGCGCCCTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: MGSWLLQCGLEA*MHVSILAPWSS
Trigger: TGAGCTCCAGGGCGCTAAGATGCTGACATGCATCAATGCCTCCAAGCCGCACTGGAGCAGCCAGGAGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp ACAATCTTCACCTTCCACGTAGGGCTCGGGCCAGTTTaGGGACAATACCACCCCAGCCACAGCAGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: TIFTFHVGLGPV*GQYHPSHSREL
Trigger: GAGCTCTCTGCTGTGGCTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCTACGTGGAAGGTGAAGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp GGCCCTCTGGAGCTTCAATCGTCCAGATGCAGAATTGGCTCCCATTaGTGTTTTCAGGGTAACTTGGGGAGAGGACGCGGCCGATGGTGG +
Preference number: 6 (lower is better)
Translates to: GPLELQSSRCRIGSH*CFQGNLGRGRGRWW
Trigger: CCACCATCGGCCGCGTCCTCTCCCCAAGTTACCCTGAAAACACAAATGGGAGCCAATTCTGCATCTGGACGATTGAAGCTCCAGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp AGTCGCTTGTACAGGATTTGGTATCCATTTTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCCTCCGAAACGCAGTGGGGCAGGCGA +
Preference number: 6 (lower is better)
Translates to: SRLYRIWYPFSGSPG*SHARDSSETQWGRR
Trigger: TCGCCTGCCCCACTGCGTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTACAAGCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp GTGGGTAGTCGCTGGAGTCAATGTACCCCTCAGGATTaGAGAAGCTCACACTGCAGAGAGCTGGTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: VGSRWSQCTPQD*RSSHCRELVPA
Trigger: AGCAGGCACCAGCTCTCTGCAGTGTGAGCTTCTCCAATCCTGAGGGGTACATTGACTCCAGCGACTACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp GGGGCCCAATTCATTAAACAGGACTCACAAACGCAGTaGGGCAGGCGAGACGTCCAGATGGGAGTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: GAQFIKQDSQTQ*GRRDVQMGVPV
Trigger: AACAGGGACTCCCATCTGGACGTCTCGCCTGCCCCACTGCGTTTGTGAGTCCTGTTTAATGAATTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483291.1
CDS CAA 72 bp TACAATCTTCACCTTCCACGTAGGGCTCGGGCCAGTTaGGGGACAATACCACCCCAGCCACAGCAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: YNLHLPRRARAS*GTIPPQPQQRA
Trigger: AGCTCTCTGCTGTGGCTGGGGTGGTATTGTCCCCAAACTGGCCCGAGCCCTACGTGGAAGGTGAAGATTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp CACTGTTCCCAAGGTACTGCCCCAAGATGTGGGGCATaGCCTCGTCGCCATCGTAGATGGTCAAGATGTCAC +
Preference number: 6 (lower is better)
Translates to: HCSQGTAPRCGA*PRRHRRWSRCH
Trigger: GTGACATCTTGACCATCTACGATGGCGACGAGGTCATGCCCCACATCTTGGGGCAGTACCTTGGGAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp ACACCAGTTAGTTTGGGGAGATTTAGGACCTTCACCTaGTGTCAGACTCTGAGGGTGGCCCTCCTAAGGGCG +
Preference number: 6 (lower is better)
Translates to: TPVSLGRFRTFT*CQTLRVALLRA
Trigger: CGCCCTTAGGAGGGCCACCCTCAGAGTCTGACAGCAGGTGAAGGTCCTAAATCTCCCCAAACTAACTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS CCA 72 bp TGGATGGTTAAGTCTGGCGTGGAGGAGTACAGTTTCTaGGGGCCACTGTTCCCAAGGTACTGCCCCAAGATG +
Preference number: 6 (lower is better)
Translates to: WMVKSGVEEYSF*GPLFPRYCPKM
Trigger: CATCTTGGGGCAGTACCTTGGGAACAGTGGCCCCCAGAAACTGTACTCCTCCACGCCAGACTTAACCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp CAGGGTCCGAATGGAACTGGATGGTTAAGTCTGGCGTaGAGGAGTACAGTTTCTGGGGGCCACTGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: QGPNGTGWLSLA*RSTVSGGHCSQ
Trigger: TTGGGAACAGTGGCCCCCAGAAACTGTACTCCTCCACGCCAGACTTAACCATCCAGTTCCATTCGGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp TGGCCCTTTCCAAAGATGAGGCCAGCAGGGTCCGAATaGAACTGGATGGTTAAGTCTGGCGTGGAGGAGTAC +
Preference number: 6 (lower is better)
Translates to: WPFPKMRPAGSE*NWMVKSGVEEY
Trigger: GTACTCCTCCACGCCAGACTTAACCATCCAGTTCCATTCGGACCCTGCTGGCCTCATCTTTGGAAAGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp GTGCAGCTTCTGGCCCTCTGGAGCTTCAATCGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTCAGGGTAACTTGGGGAGAGGACGCG +
Preference number: 6 (lower is better)
Translates to: VQLLALWSFNRPDAE*APICVFRVTWGEDA
Trigger: CGCGTCCTCTCCCCAAGTTACCCTGAAAACACAAATGGGAGCCAATTCTGCATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp GAAGGTGAGGGACTCTCCTGGCAGGTAGAGTCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAGCCCTGGGTTGTCACATGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: EGEGLSWQVESLVQD*VSIFRQPWVVTCQG
Trigger: TCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000494013.1
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp GACACTCTCGGTTTGAAGGGAGTCGTAGAGAAGAGCTaGCTTGTTGGTCTGCCCGCTGTGAACCGTCATCCT +
Preference number: 6 (lower is better)
Translates to: DTLGLKGVVEKS*LVGLPAVNRHP
Trigger: AGGATGACGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGACTCCCTTCAAACCGAGAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp ACCAGCAGCACAGGATCCGAAATTAAGCGGGTCGAGTaGTCCACCTCTCCGGGGTCGGTGCAGTACATAATT +
Preference number: 6 (lower is better)
Translates to: TSSTGSEIKRVE*STSPGSVQYII
Trigger: AATTATGTACTGCACCGACCCCGGAGAGGTGGATCACTCGACCCGCTTAATTTCGGATCCTGTGCTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000483291.1
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp ATCCTGTCCTTGTCATGCAGCAACAGCCTCTCAAAGTaGAGGTGCAGCTTCTGGCCCTCTGGAGCTTCAATC +
Preference number: 6 (lower is better)
Translates to: ILSLSCSNSLSK*RCSFWPSGASI
Trigger: GATTGAAGCTCCAGAGGGCCAGAAGCTGCACCTGCACTTTGAGAGGCTGTTGCTGCATGACAAGGACAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp CGGTTTGAAGGGAGTCGTAGAGAAGAGCTGACTTGTTaGTCTGCCCGCTGTGAACCGTCATCCTGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: RFEGSRREELTC*SARCEPSSCPC
Trigger: ACAAGGACAGGATGACGGTTCACAGCGGGCAGACCAACAAGTCAGCTCTTCTCTACGACTCCCTTCAAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 72 bp TACAGGATTTGGTATCCATTTTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCCTCCGAAACGCAGTGG +
Preference number: 6 (lower is better)
Translates to: YRIWYPFSGSPG*SHARDSSETQW
Trigger: CCACTGCGTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS TCA 72 bp TCTCGTAAATGGGGTTGTCAAACTCGGTTTCCACGGTaGTCTGGCTGTAGGGGTGGGAGTACATCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SRKWGCQTRFPR*SGCRGGSTSEA
Trigger: TGCCTCTGATGTACTCCCACCCCTACAGCCAGATCACCGTGGAAACCGAGTTTGACAACCCCATTTACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp GTATGTGCACTCCAGAAAGTTGTTGAGGGGCAGCAGTaGGTAGTCGCTGGAGTCAATGTACCCCTCAGGATT +
Preference number: 6 (lower is better)
Translates to: VCALQKVVEGQQ*VVAGVNVPLRI
Trigger: AATCCTGAGGGGTACATTGACTCCAGCGACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp CTTGTACAGGATTTGGTATCCATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGACTCCTCCGAAACGCA +
Preference number: 6 (lower is better)
Translates to: LVQDLVSIFRQP*VVTCQGLLRNA
Trigger: TGCGTTTCGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248933.11
ENST00000402979.1
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 72 bp GAGCTTCAATCGTCCAGATGCAGAATTGGCTCCCATTaGTGTTTTCAGGGTAACTTGGGGAGAGGACGCGGC +
Preference number: 6 (lower is better)
Translates to: ELQSSRCRIGSH*CFQGNLGRGRG
Trigger: GCCGCGTCCTCTCCCCAAGTTACCCTGAAAACACAAATGGGAGCCAATTCTGCATCTGGACGATTGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 72 bp GGACTCTCCTGGCAGGTAGAGTCGCTTGTACAGGATTaGGTATCCATTTTCAGGCAGCCCTGGGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: GLSWQVESLVQD*VSIFRQPWVVT
Trigger: TGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTACAAGCGACTCTACCTGCCAGGAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000494013.1
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp CCTCGGGAAGAGCATCTTGGAAGAGGAGAAAAGACACCAGTTAGTTaGGGGAGATTTAGGACCTTCACCTGCTGTCAGACTCTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: PREEHLGRGEKTPVS*GRFRTFTCCQTLRV
Trigger: CACCCTCAGAGTCTGACAGCAGGTGAAGGTCCTAAATCTCCCCAAACTAACTGGTGTCTTTTCTCCTCTTCCAAGATGCTCTTCCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS TCA 72 bp AGACTGTCACGTTGTATGTGCACTCCAGAAAGTTGTTaGGGGGCAGCAGTGGGTAGTCGCTGGAGTCAATGT +
Preference number: 6 (lower is better)
Translates to: RLSRCMCTPESC*GAAVGSRWSQC
Trigger: ACATTGACTCCAGCGACTACCCACTGCTGCCCCTCAACAACTTTCTGGAGTGCACATACAACGTGACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS GCA 72 bp GCAGCTTCTGGCCCTCTGGAGCTTCAATCGTCCAGATaGAGAATTGGCTCCCATTTGTGTTTTCAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: AASGPLELQSSR*RIGSHLCFQGN
Trigger: GTTACCCTGAAAACACAAATGGGAGCCAATTCTGCATCTGGACGATTGAAGCTCCAGAGGGCCAGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp TTTCCAAAGATGAGGCCAGCAGGGTCCGAATGGAACTaGATGGTTAAGTCTGGCGTGGAGGAGTACAGTTTC +
Preference number: 6 (lower is better)
Translates to: FPKMRPAGSEWN*MVKSGVEEYSF
Trigger: GAAACTGTACTCCTCCACGCCAGACTTAACCATCCAGTTCCATTCGGACCCTGCTGGCCTCATCTTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp AAAGCCTTCGTAGCACATGAAGGTGAGGGACTCTCCTaGCAGGTAGAGTCGCTTGTACAGGATTTGGTATCC +
Preference number: 6 (lower is better)
Translates to: KAFVAHEGEGLS*QVESLVQDLVS
Trigger: GGATACCAAATCCTGTACAAGCGACTCTACCTGCCAGGAGAGTCCCTCACCTTCATGTGCTACGAAGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000404234.7
ENST00000494013.1
ENST00000529632.6
ENST00000629590.2
CDS CCA 72 bp CTTGTACAGGATTTGGTATCCATTTTCAGGCAGCCCTaGGTTGTCACATGCCAGGGACTCCTCCGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: LVQDLVSIFRQP*VVTCQGLLRFL
Trigger: GAGAAAACGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360929.7
CDS CAA 72 bp CTGGCCCTCTGGAGCTTCAATCGTCCAGATGCAGAATaGGCTCCCATTTGTGTTTTCAGGGTAACTTGGGGA +
Preference number: 6 (lower is better)
Translates to: LALWSFNRPDAE*APICVFRVTWG
Trigger: TCCCCAAGTTACCCTGAAAACACAAATGGGAGCCAATTCTGCATCTGGACGATTGAAGCTCCAGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248933.11
ENST00000343706.8
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
ENST00000629590.2
CDS CAA 90 bp GAGGTAAGGACCCAAAGGGCTAGCATCTCCCTCGGGAAGAGCATCTaGGAAGAGGAGAAAAGACACCAGTTAGTTTGGGGAGATTTAGGA +
Preference number: 6 (lower is better)
Translates to: EVRTQRASISLGKSI*EEEKRHQLVWGDLG
Trigger: TCCTAAATCTCCCCAAACTAACTGGTGTCTTTTCTCCTCTTCCAAGATGCTCTTCCCGAGGGAGATGCTAGCCCTTTGGGTCCTTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS CAA 72 bp TACAGGATTTGGTATCCATTTTCAGGCAGCCCTGGGTaGTCACATGCCAGGGACTCCTCCGTTTTCTCACAA +
Preference number: 6 (lower is better)
Translates to: YRIWYPFSGSPG*SHARDSSVFSQ
Trigger: TTGTGAGAAAACGGAGGAGTCCCTGGCATGTGACAACCCAGGGCTGCCTGAAAATGGATACCAAATCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360929.7
CDS TCA 72 bp CTAGCAGCCCAGCCTTCCATCATGAACAAGAGAAAGTaGATCTGCTTCTACCTACTGGGGGCCCAATTCATT +
Preference number: 6 (lower is better)
Translates to: LAAQPSIMNKRK*ICFYLLGAQFI
Trigger: AATGAATTGGGCCCCCAGTAGGTAGAAGCAGATTCACTTTCTCTTGTTCATGATGGAAGGCTGGGCTGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483291.1
CDS CCA 72 bp AGCATCTTGGAAGAGGAGAAAAGACACCAGTTAGTTTaGGGAGATTTAGGACCTTCACCTGCTGTCAGACTC +
Preference number: 6 (lower is better)
Translates to: SILEEEKRHQLV*GDLGPSPAVRL
Trigger: GAGTCTGACAGCAGGTGAAGGTCCTAAATCTCCCCAAACTAACTGGTGTCTTTTCTCCTCTTCCAAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402979.1
ENST00000403121.5
CDS CAA 90 bp TTCAATCAAGTGCCACATGGTCTCTGGATGAATGTCTCGAGGAGATaGTGGTTGAGTTCACAAGTCCCCTTCTCAAGTGTAGCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: FNQVPHGLWMNVSRR*WLSSQVPFSSVALF
Trigger: AAAGAGAGCTACACTTGAGAAGGGGACTTGTGAACTCAACCACAATCTCCTCGAGACATTCATCCAGAGACCATGTGGCACTTGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248933.11
ENST00000360929.7
ENST00000402979.1
ENST00000403121.5
ENST00000404234.7
ENST00000529632.6
CDS CAA 90 bp GCTTTTCACCTGACACCTAACCTGCGCATCCATTATGACTACGTCTaGTCTTTCAATACTCAATCTTCATTTCTCCTTCTCCAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: AFHLTPNLRIHYDYV*SFNTQSSFLLLQEA
Trigger: GGCTTCCTGGAGAAGGAGAAATGAAGATTGAGTATTGAAAGACAAGACGTAGTCATAATGGATGCGCAGGTTAGGTGTCAGGTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494013.1
CDS CAA 72 bp CTGACACCTAACCTGCGCATCCATTATGACTACGTCTaGTCTTTCAATACTCAATCTTCATTTCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: LTPNLRIHYDYV*SFNTQSSFLLL
Trigger: GAGAAGGAGAAATGAAGATTGAGTATTGAAAGACAAGACGTAGTCATAATGGATGCGCAGGTTAGGTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494013.1