RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEZ6 (Homo sapiens)

Ensembl gene IDs: ENSG00000063015

Ensembl transcript IDs: ENST00000317338.17, ENST00000335960.10, ENST00000360295.13, ENST00000442608.7, ENST00000535262.1, ENST00000539265.1, ENST00000540419.5, ENST00000540632.6, ENST00000544224.2, ENST00000585644.1

Found 1410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGTGCCGTGCACTAGCTCAGGCTGCGATGGGCTCTTCCAGCCATTaGGGATCTCAGGCAGCTCCGGACATGTGTCATTGCGGGGCACCT +
Preference number: 1 (lower is better)
Translates to: RCRALAQAAMGSSSH*GSQAAPDMCHCGAP
Trigger: AGGTGCCCCGCAATGACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCACGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp AGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAACCTGAGGTGGGGGTAGGGTCCCCC +
Preference number: 1 (lower is better)
Translates to: RVVSGKWRVLLWCGA*VPREAQPEVGVGSP
Trigger: GGGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR GCA 90 bp GTGGCCCCCACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCGTGGCAGGAAGTCACCCTCTGGCAT +
Preference number: 1 (lower is better)
Translates to: VAPTGNLGLDMRRRL*STSPGSWQEVTLWH
Trigger: ATGCCAGAGGGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 90 bp CCTGGCCCTTCAGCACATAGCCAGGGGCACACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCTGCTTCTCAGGACTTCGGGCACCAT +
Preference number: 1 (lower is better)
Translates to: PGPSAHSQGHTRSGW*PLLGVAASQDFGHH
Trigger: ATGGTGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGGGGCCACCATCCACTTCTCGTGTGCCCCTGGCTATGTGCTGAAGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp GGACACTGGATCCCACTACCTGGTAGCCAGGGTAGCACTGGTAAGTaGCCACGGTGCCGTGCACTAGCTCAGGCTGCGATGGGCTCTTCC +
Preference number: 1 (lower is better)
Translates to: GHWIPLPGSQGSTGK*PRCRALAQAAMGSS
Trigger: GGAAGAGCCCATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCACTTACCAGTGCTACCCTGGCTACCAGGTAGTGGGATCCAGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR GCA 90 bp CCAGTGGCAAGAAGATGGCAGCTGCAATGTGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCTTGGCAACATCCAGGCTGCGACTGT +
Preference number: 1 (lower is better)
Translates to: PVARRWQLQCGQHPG*WRQQVPWQHPGCDC
Trigger: ACAGTCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp CCCGGTCACTCCACTTGGGGCTGCCAGCCTGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCAGCACAAAACCCTGGTCACAGATAT +
Preference number: 1 (lower is better)
Translates to: PGHSTWGCQPGDHGR*GWSCPSAQNPGHRY
Trigger: ATATCTGTGACCAGGGTTTTGTGCTGATGGGCAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 90 bp GTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGC +
Preference number: 1 (lower is better)
Translates to: VGIAGGEGHNFLRAW*HLLLGGIYRRWRDS
Trigger: GCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp GCGTCTCCCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTaGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCCCCT +
Preference number: 1 (lower is better)
Translates to: ASPWGSPTTCSMPNS*VLGPLLLSRICPPP
Trigger: AGGGGGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGGGAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp AGGAGACATTTAGGGGCCCGGTCACTCCACTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGGATGGAGCTGCCCATCAGCACAAAA +
Preference number: 1 (lower is better)
Translates to: RRHLGARSLHLGLPA*RSWQVRMELPISTK
Trigger: TTTTGTGCTGATGGGCAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGCCCCTAAATGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp GACATCAGCCATGGAGGTAAAGAGCTTGAAGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCGGGCCGTCAGGTCATCCCCATCATA +
Preference number: 1 (lower is better)
Translates to: DISHGGKELEVATGP*VLAQNPGRQVIPII
Trigger: TATGATGGGGATGACCTGACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCATGGCTGATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp AGATATATTGCACGGTGGCCCCCACGGGAAACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: RYIARWPPRETWGWI*GVGCAPHLQDRGRK
Trigger: CTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR GCA 90 bp TTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTaGAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: FIPLDHRAWVQAEVS*KAVVGIPDPKRGAG
Trigger: CCCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR CCA 90 bp AACAACACCATCGCCACCAGTGGCAAGAAGATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTGGAGGCAGCAGGTGCCTTGGCAACA +
Preference number: 1 (lower is better)
Translates to: NNTIATSGKKMAAAM*AASRVLEAAGALAT
Trigger: TGTTGCCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTGTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp TTCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCC +
Preference number: 1 (lower is better)
Translates to: FQAGPGHEEAQDAGC*CLCSSYVLPTGRCP
Trigger: GGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR TCA 90 bp CAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTC +
Preference number: 1 (lower is better)
Translates to: QDYPEVTVERSFGHW*WRCEEYPGAVPTMV
Trigger: GACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp GAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACCTAGAT +
Preference number: 1 (lower is better)
Translates to: EVEGQQEARSLAAGL*CKSELTSLDCPHLD
Trigger: ATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000540419.5
3UTR CCA 90 bp TGCTTCTCAGGACTTCGGGCACCATTCTCAGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCCAGGAGACATTTAGGGGCCCGGTCA +
Preference number: 1 (lower is better)
Translates to: CFSGLRAPFSGALRP*HGLSCSRRHLGARS
Trigger: TGACCGGGCCCCTAAATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCCTGAGAATGGTGCCCGAAGTCCTGAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 90 bp GATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAG +
Preference number: 1 (lower is better)
Translates to: DACAPAMFFPQVDAP*HGPNEGPQVGNDTK
Trigger: CTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp TTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGT +
Preference number: 1 (lower is better)
Translates to: LRAWWHLLLGGIYRR*RDSRKQGALLLDCG
Trigger: ACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTACTCCTGCTCTGCTAGTGTGTTCCAG +
Preference number: 1 (lower is better)
Translates to: GQVNPAAGCHARAGW*SCGERYSCSASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp CCTCTCCAGAATATGCCCACCCCCTCCCCTTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGAGGAGGGA +
Preference number: 1 (lower is better)
Translates to: PLQNMPTPSPYPITQ*SRGEPDKWLELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGGGGAGGGGGTGGGCATATTCTGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR TCA 90 bp ACAGCAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTGCCCCCACCTAGATGGAGACTTCAT +
Preference number: 1 (lower is better)
Translates to: TAGSKEPCCWTVVQV*VDFPRLPPPRWRLH
Trigger: ATGAAGTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 90 bp CATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATaGTGGTCATGTGGAGAAAGGTACTCCTGCTCTGCTAGTGTGTTC +
Preference number: 1 (lower is better)
Translates to: HGQVNPAAGCHARAG*WSCGERYSCSASVF
Trigger: GAACACACTAGCAGAGCAGGAGTACCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 90 bp ATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTaGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTT +
Preference number: 1 (lower is better)
Translates to: ITCTKWLSASSWASP*GSPTTCSMPNSWVL
Trigger: AAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR GCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGT +
Preference number: 1 (lower is better)
Translates to: LAAGLWCKSELTSLD*PHLDGDFIFSRLSS
Trigger: ACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 90 bp TGCTTTTCAAAATCTGGAGAATTTATTCCCTTGGACCATAGGGCCTaGGTCCAGGCAGAGGTTTCCTGCAAAGCTGTGGTAGGGATCCCG +
Preference number: 1 (lower is better)
Translates to: CFSKSGEFIPLDHRA*VQAEVSCKAVVGIP
Trigger: CGGGATCCCTACCACAGCTTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAGATTTTGAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CAA 90 bp ACGGTGCCGTGCACTAGCTCAGGCTGCGATGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCCGGACATGTGTCATTGCGGGGCACC +
Preference number: 2 (lower is better)
Translates to: TVPCTSSGCDGLFQP*GISGSSGHVSLRGT
Trigger: GGTGCCCCGCAATGACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCACGGCACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 90 bp GGCTTGAGCTGTTCCAGGAGACATTTAGGGGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGATCATGGCAGGTGAGGATGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GLSCSRRHLGARSLH*GLPAWRSWQVRMEL
Trigger: CAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGCCCCTAAATGTCTCCTGGAACAGCTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp AAACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 2 (lower is better)
Translates to: KLGAGYEASAVLHISRIVVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...CACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 2 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAACTGGTAGCCCAGCACTaGGGTCCCGGGGTCCGACTG +
Preference number: 2 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKLVAQH*GPGVRL
Trigger: CAGTCGGACCCCGGGACCTCAGTGCTGGGCTACCAG...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR GCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 2 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 2 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 2 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: HGGHRRRGRAQLLEG*VASPPRWYIQEVEG
Trigger: TCCCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 2 (lower is better)
Translates to: KMACPALVWSMSAQGSPTQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 2 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp ACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGACTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: TGNLGLDMRRRLCSTSPGLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...TCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 90 bp AAACCCTGGTCACAGATATATTGCACGGTGGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: KPWSQIYCTVAPTGN*GLDMRRRLCSTSPG
Trigger: TCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCTGTGACCAGGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 2 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR GCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 2 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR CCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GQWKMACPALVWSMSAQGQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: GGQWKMACPALVWSMSAQARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTC +
Preference number: 2 (lower is better)
Translates to: CWHARTTQRSPLRGV*AIGDGAVRSTLVQF
Trigger: GAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: GQWKMACPALVWSMSAQGKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 2 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: MLACQDYPEVTVERSFGHLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: QEARSLAAGLWCKSELTSLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGAAAGGCCTAAGTACTGAGTaGGCAGGGGCTGACTTGGAA +
Preference number: 2 (lower is better)
Translates to: VSCKAVVGIPDPKRGAGKGLSTE*AGADLE
Trigger: TTCCAAGTCAGCCCCTGCTCACTCAGTACTTAGGCC...TTTCCCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR-3UTR GCA 90 bp ATATATTGCACGGTGGCCCCCACGGGAAACTTGGGGCTGGATATGAGGCGTCGGTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: IYCTVAPTGNLGLDMRRRLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...CCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCACCGTGCAATATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR GCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 2 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: PQGIGWSVENGVSCFGVELPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAACTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 2 (lower is better)
Translates to: FRELETSQEADVGMPGLPCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 2 (lower is better)
Translates to: MLACQDYPEVTVERSFGHNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: KMACPALVWSMSAQGSPTRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGCCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: QEARSLAAGLWCKSELTSARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GGQWKMACPALVWSMSAQGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCACAGGAAGTCACCCTCTaGCATGAGGGCAGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPQEVTL*HEGRSS
Trigger: TGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: FRELETSQEADVGMPGLPLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 2 (lower is better)
Translates to: GGQWKMACPALVWSMSAQVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 2 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR GCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 2 (lower is better)
Translates to: KMACPALVWSMSAQGSPTFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: IGWSVENGVSCFGVEHECENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 2 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 2 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 2 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: FRELETSQEADVGMPGLPLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 2 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000540419.5
3UTR-3UTR GCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 2 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 2 (lower is better)
Translates to: VQNFRELETSQEADVGMPNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 2 (lower is better)
Translates to: GGQWKMACPALVWSMSAQENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: GGQWKMACPALVWSMSAQLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 2 (lower is better)
Translates to: GQWKMACPALVWSMSAQGLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: KMACPALVWSMSAQGSPTASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GQWKMACPALVWSMSAQGASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: KMACPALVWSMSAQGSPTNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: GRVPLNPLGSPRITASTGNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: MLACQDYPEVTVERSFGHGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 2 (lower is better)
Translates to: QEARSLAAGLWCKSELTSRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR CCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 2 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCCCACCTAGATGGAGACTTCATATTC +
Preference number: 2 (lower is better)
Translates to: QEARSLAAGLWCKSE*TSLDCPHLDGDFIF
Trigger: GAATATGAAGTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 2 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 2 (lower is better)
Translates to: CWHARTTQRSPLRGVLAISFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: QEARSLAAGLWCKSELTSLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 2 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 2 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 2 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: PYPITQWSRGEPDKWLELGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: FRELETSQEADVGMPGLPTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TGCCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGTCTCGTAAGTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: CPHLDGDFIFSRLSSLVSQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...ACTTACGAGACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR TCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCATTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 2 (lower is better)
Translates to: VQNFRELETSQEADVGMPFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: IGWSVENGVSCFGVEHECMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: VQNFRELETSQEADVGMPGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 2 (lower is better)
Translates to: GRTVQNFRELETSQEADVQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TTTGCTTTTCAAAATCTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCGAAGGAGTGACAGCATaGAGGCAGAGAGGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: FAFQNLENLFPWTIGPGSEGVTA*RQRGVG
Trigger: CCCTACCCCTCTCTGCCTCCATGCTGTCACTCCTTC...GGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAGATTTTGAAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR-3UTR TCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 2 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 2 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR GCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVALTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000540419.5
3UTR-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 2 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR TCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 2 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp TTAGGGGCCCGGTCACTCCACTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGGATGGAGCTGCCCATC +
Preference number: 3 (lower is better)
Translates to: LGARSLHLGLPA*RSWQVRMELPI
Trigger: GATGGGCAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGCCCCTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 72 bp GCACGGTGGCCCCCACGGGAAACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCACATCTCCAGGATCGT +
Preference number: 3 (lower is better)
Translates to: ARWPPRETWGWI*GVGCAPHLQDR
Trigger: ACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCACCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 72 bp GTAGAACCCATCCAGAGAGGCAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGAGGGGTGCCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: VEPIQRGSPTDG*GVTPMRGVPRH
Trigger: GTGCCTGGGCACCCCTCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCTGCCTCTCTGGATGGGTTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 72 bp ATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTaGCAGGAAGTCACCCTCTGGCATGAGGGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: MRRRLCSTSPGS*QEVTLWHEGRS
Trigger: GGACCTGCCCTCATGCCAGAGGGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 72 bp CATGGAGGTAAAGAGCTTGAAGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCGGGCCGTCAGGTCATC +
Preference number: 3 (lower is better)
Translates to: HGGKELEVATGP*VLAQNPGRQVI
Trigger: GATGACCTGACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 72 bp TCCACTTGGGGCTGCCAGCCTGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCAGCACAAAACCCTGGT +
Preference number: 3 (lower is better)
Translates to: STWGCQPGDHGR*GWSCPSAQNPG
Trigger: ACCAGGGTTTTGTGCTGATGGGCAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR GCA 72 bp GGGCGTCTCCCTGGGGCTCTCCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: GRLPGALLPPVP*QIPGSLDLCSS
Trigger: AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGGGAGACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR GCA 72 bp CACGAGAAGTGGATGGTGGCCCCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCACCATTCTCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: HEKWMVAPAGCS*FSGLRAPFSGA
Trigger: TGCCCCTGAGAATGGTGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGGGGCCACCATCCACTTCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 72 bp GTAAAGAGCTTGAAGTGGCTACGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTCAGGTCATCCCCATCA +
Preference number: 3 (lower is better)
Translates to: VKSLKWLRGPEY*PRTRAVRSSPS
Trigger: TGATGGGGATGACCTGACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR CAA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 3 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 3 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR TCA 72 bp ATCCCACTACCTGGTAGCCAGGGTAGCACTGGTAAGTaGCCACGGTGCCGTGCACTAGCTCAGGCTGCGATG +
Preference number: 3 (lower is better)
Translates to: IPLPGSQGSTGK*PRCRALAQAAM
Trigger: CATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCACTTACCAGTGCTACCCTGGCTACCAGGTAGTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR GCA 72 bp ACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCGTGGCAGGAAGTCACC +
Preference number: 3 (lower is better)
Translates to: TGNLGLDMRRRL*STSPGSWQEVT
Trigger: GGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 72 bp TCGGGCACCATTCTCAGGGGCACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAGACATTTAGGGGCCCG +
Preference number: 3 (lower is better)
Translates to: SGTILRGTETMA*LELFQETFRGP
Trigger: CGGGCCCCTAAATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCCTGAGAATGGTGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 72 bp TCAGCACATAGCCAGGGGCACACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCTGCTTCTCAGGACTTC +
Preference number: 3 (lower is better)
Translates to: SAHSQGHTRSGW*PLLGVAASQDF
Trigger: GAAGTCCTGAGAAGCAGCTACACCCAGCAGGGGCCACCATCCACTTCTCGTGTGCCCCTGGCTATGTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR CAA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 3 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: GQWKMACPALVWSMSAQGRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: GRVPLNPLGSPRITASTGRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 3 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 72 bp GCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGGCCCCAAGTGGGCAAT +
Preference number: 3 (lower is better)
Translates to: APAMFFPQVDAP*HGPNEGPQVGN
Trigger: ATTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR TCA 72 bp CCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCC +
Preference number: 3 (lower is better)
Translates to: PEVTVERSFGHW*WRCEEYPGAVP
Trigger: GGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR TCA 72 bp AGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAACCTGAGGTGGGGGTA +
Preference number: 3 (lower is better)
Translates to: SGKWRVLLWCGA*VPREAQPEVGV
Trigger: TACCCCCACCTCAGGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR GCA 72 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: QGIGWSVENGVS*FGVEHECPGKP
Trigger: GGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR GCA 72 bp TTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTaGAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: LDHRAWVQAEVS*KAVVGIPDPKR
Trigger: TCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR CCA 72 bp GCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGTATATACAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: AGGEGHNFLRAW*HLLLGGIYRRW
Trigger: CCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp ACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTaGGGCTCTCCTACCACCTGTTCCATGCCAAATTCC +
Preference number: 3 (lower is better)
Translates to: TKWLSASSWASP*GSPTTCSMPNS
Trigger: GGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp ATGGTGACATCAGCCATGGAGGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTACTGGCCCAGAACCCGG +
Preference number: 3 (lower is better)
Translates to: MVTSAMEVKSLK*LRGPEYWPRTR
Trigger: CCGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCATGGCTGATGTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR TCA 72 bp AGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTGCCCCCACCTAGATGG +
Preference number: 3 (lower is better)
Translates to: SKEPCCWTVVQV*VDFPRLPPPRW
Trigger: CCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000540419.5
3UTR CCA 72 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTACTCCTGCTCTGCTAGT +
Preference number: 3 (lower is better)
Translates to: NPAAGCHARAGW*SCGERYSCSAS
Trigger: ACTAGCAGAGCAGGAGTACCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp GTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATaGTGGTCATGTGGAGAAAGGTACTCCTGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: VNPAAGCHARAG*WSCGERYSCSA
Trigger: AGCAGAGCAGGAGTACCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: MLACQDYPEVTVERSFGHRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 3 (lower is better)
Translates to: QEARSLAAGLWCKSELTSEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR TCA 72 bp CGTCTCTCCAGTCTCGTAAGTTGGATTGTCAAACGCTaGCTCTATGGTAATGCGGTTGTAGGGGCGGGGGCG +
Preference number: 3 (lower is better)
Translates to: RLSSLVSWIVKR*LYGNAVVGAGA
Trigger: CGCCCCCGCCCCTACAACCGCATTACCATAGAGTCAGCGTTTGACAATCCAACTTACGAGACTGGAGAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR GCA 72 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGGTGGTCATGTGGAGAA +
Preference number: 3 (lower is better)
Translates to: SSHHGQVNPAAG*HARAGWWSCGE
Trigger: TTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp TGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTaGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGC +
Preference number: 3 (lower is better)
Translates to: WGSPTTCSMPNS*VLGPLLLSRIC
Trigger: GCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp TACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTaGGCGTCTCCCTGGGGCTCTCCTACCACCTGTTCC +
Preference number: 3 (lower is better)
Translates to: YITCTKWLSASS*ASPWGSPTTCS
Trigger: GGAACAGGTGGTAGGAGAGCCCCAGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 3 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 3 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 3 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 3 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 3 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPRPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CCA 72 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTG +
Preference number: 3 (lower is better)
Translates to: IGGKSPFPQGIG*SVENGVSCFGV
Trigger: CACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp AATATGCCCACCCCCTCCCCTTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTG +
Preference number: 3 (lower is better)
Translates to: NMPTPSPYPITQ*SRGEPDKWLEL
Trigger: CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGGGGAGGGGGTGGGCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 3 (lower is better)
Translates to: RTVQNFRELETSQEADVGWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 3 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENSGHVS*RGTSKK
Trigger: CTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR GCA 72 bp GGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGACTTCATATTCTCTCGT +
Preference number: 3 (lower is better)
Translates to: GLWCKSELTSLD*PHLDGDFIFSR
Trigger: ACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR-3UTR CAA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 3 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: GRTVQNFRELETSQEADVTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR CCA 72 bp AAATCTGGAGAATTTATTCCCTTGGACCATAGGGCCTaGGTCCAGGCAGAGGTTTCCTGCAAAGCTGTGGTA +
Preference number: 3 (lower is better)
Translates to: KSGEFIPLDHRA*VQAEVSCKAVV
Trigger: TACCACAGCTTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR-3UTR CAA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 3 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR-3UTR CAA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTAGCCGTCACCGCCGCTaGCGCCGCCAGCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPSRHRR*RRQRLT
Trigger: TGTCAGGCGCTGGCGGCGGCAGCGGCGGTGACGGCT...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR GCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGCCGTCACCGCCGCTaGCGCCGCCAGCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPSRHRR*RRQRLT
Trigger: TGTCAGGCGCTGGCGGCGGCAGCGGCGGTGACGGCT...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTACCGGGCGCATGGTaGTGGTTGCGGCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLLPGAW*WLRPRP
Trigger: AGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGGCGGCTGTCCTGGTTaGCCAGGCGGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPGGCPG*PGGEGD
Trigger: GTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCACCCCTGGGCCTAGGGTaGGCACTGCCATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVAPLGLG*ALPCWA
Trigger: GGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGG...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGCCAGGGCCAGCCGGTaGCGGGAGGCTCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASARASR*REALEP
Trigger: AGGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGCGCATGGTGCTGGTTaGGGCCGCGCCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERAHGAG*GRALGW
Trigger: CCAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAGGGCTACCGGGCGCATaGTGCTGGTTGCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSGLPGA*CWLRPR
Trigger: GCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCC...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAACAGGGCGGCTGTCCTaGTTGGCCAGGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVATGRLS*LARRGR
Trigger: CCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGT...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGGTGGGGCTGCGGATaGCTTGGCCCCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGWGCG*LGPAAG
Trigger: TCCTGCTGCGGGGCCAAGTCATCCGCAGCCCCACCC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTGCGATGGGCTCTTCCAGCCATTGGGGATCTCAGGCAGCTCCGGACATGTGTCCTGGTAGCCCAGCACTaGGGTCCCGGGGTCCGACTG +
Preference number: 4 (lower is better)
Translates to: LRWALPAIGDLRQLRTCVLVAQH*GPGVRL
Trigger: CAGTCGGACCCCGGGACCTCAGTGCTGGGCTACCAG...GACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTCTACCGGGCGCATGGTaGTGGTTGCGGCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACLPGAW*WLRPRP
Trigger: AGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAG...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAGGCCGGTGGTGGCATTaGGGATCACCCCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVAGRWWH*GSPLGT
Trigger: AGTGCCCAGGGGTGATCCGCAATGCCACCACCGGCC...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLGQHPG*WRQQVP
Trigger: AGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGGGCTACCGGGCGCATaGTGCTGGTTGCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGGLPGA*CWLRPR
Trigger: GCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAGGGCTACCGGGCGCATaGTGCTGGTTGCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPGLPGA*CWLRPR
Trigger: GCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCC...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAGGCGGCTGTCCTGGTTaGCCAGGCGGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSGGCPG*PGGEGD
Trigger: GTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCC...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTCCCCTGGGCCTAGGGTaGGCACTGCCATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGPLGLG*ALPCWA
Trigger: GGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGG...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCTCAGGGCCGCTTGGTaGGTGGGGCTGCGGATGACT +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASLRAAW*VGLRMT
Trigger: AGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAG...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTGGTGGCGGGAGGCTCTaGAACCTCAGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPGGGRL*NLRAAW
Trigger: CCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACC...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGGCCAGGGCCAGCCGGTaGCGGGAGGCTCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWARASR*REALEP
Trigger: AGGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGC...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGCCAGGGCCAGCCGGTaGCGGGAGGCTCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWARASR*REALEP
Trigger: AGGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGGGTGGGGCTGCGGATaGCTTGGCCCCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGGWGCG*LGPAAG
Trigger: TCCTGCTGCGGGGCCAAGTCATCCGCAGCCCCACCC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGGTGGGGCTGCGGATaGCTTGGCCCCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGWGCG*LGPAAG
Trigger: TCCTGCTGCGGGGCCAAGTCATCCGCAGCCCCACCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTAGCCGTCACCGCCGCTaGCGCCGCCAGCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSSRHRR*RRQRLT
Trigger: TGTCAGGCGCTGGCGGCGGCAGCGGCGGTGACGGCT...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR GCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCGCGCATGGTGCTGGTTaGGGCCGCGCCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAAHGAG*GRALGW
Trigger: CCAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGC...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGGGGCTACCGGGCGCATaGTGCTGGTTGCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLGLPGA*CWLRPR
Trigger: GCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCC...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGCGGCTGTCCTGGTTaGCCAGGCGGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCGGCPG*PGGEGD
Trigger: GTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCCCCCTGGGCCTAGGGTaGGCACTGCCATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAPLGLG*ALPCWA
Trigger: GGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGG...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPPIPAP*DTTSAT
Trigger: GGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGTGGCGGGAGGCTCTaGAACCTCAGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGGGRL*NLRAAW
Trigger: CCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVACRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGCGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACCGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTCGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCAGCATCCAGGGTGCTaGAGGCAGCAGGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASQHPGC*RQQVPW
Trigger: CCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTG...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCAAGCATAGGGGACTCTaGCTCCGGACTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLKHRGL*LRTPGS
Trigger: GGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTT...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGGGTGGGGCTGCGGATaGCTTGGCCCCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPGWGCG*LGPAAG
Trigger: TCCTGCTGCGGGGCCAAGTCATCCGCAGCCCCACCC...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTGGGTGGGGCTGCGGATaGCTTGGCCCCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSGWGCG*LGPAAG
Trigger: TCCTGCTGCGGGGCCAAGTCATCCGCAGCCCCACCC...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGCGCCAGCCGAGTCTGTaGTCTCCCCGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQRQPSL*SPRCTR
Trigger: CCGTGTGCAGCGGGGAGATCACAGACTCGGCTGGCG...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGACGCCAGCCGAGTCTGTaGTCTCCCCGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGRQPSL*SPRCTR
Trigger: CCGTGTGCAGCGGGGAGATCACAGACTCGGCTGGCG...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASGDHGR*GWSCPS
Trigger: TGATGGGCAGCTCCATCCTCACCTGCCATGATCGCC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTCTACCGGGCGCATGGTaGTGGTTGCGGCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSLPGAW*WLRPRP
Trigger: AGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAG...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGGGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NLGLDMRRRLCSTSPGSWGQHPG*WRQQVP
Trigger: AGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCC...CCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWGQHPG*WRQQVP
Trigger: AGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CGGTCACTCCACTTGGGGCTGCCAGCCTGGCGATCATGGCAGGTGAGGATGGAGCGCCGCAAGCAGCGATaGAGACGGGCTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RSLHLGLPAWRSWQVRMERRKQR*RRAPLN
Trigger: ATTCAAAGGAGCCCGTCTGCATCGCTGCTTGCGGCG...CTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp AGAGGTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: RGFLQSCGRDPGPKERGRGRWWH*GSLRRK
Trigger: CTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCC...CCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCGTGGACGCCTCGTTCTaGCTGCTCAGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLVDASF*LLRCGG
Trigger: GCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCAC...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCACAGGGCGGCTGTCCTaGTTGGCCAGGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHATGRLS*LARRGR
Trigger: CCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCACAGGGCGGCTGTCCTaGTTGGCCAGGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTTGRLS*LARRGR
Trigger: CCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGT...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLNLRAA*WVGLRM
Trigger: CATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTT...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRNLRAA*WVGLRM
Trigger: CATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTT...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGTGGCGGGAGGCTCTaGAACCTCAGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQGGGRL*NLRAAW
Trigger: CCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGCCAGGGCCAGCCGGTaGCGGGAGGCTCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHARASR*REALEP
Trigger: AGGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCAGTTP*VEAGDS
Trigger: ACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGC...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGGCTCTTCCAGCCATTaGGGATCTCAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPGSSSH*GSQAAP
Trigger: CGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGAAGTGGCTACGGGGCCCTGAGTACTGGCCCAGAACCCGGGCCGTCAGGTCAAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGA +
Preference number: 4 (lower is better)
Translates to: LKWLRGPEYWPRTRAVRSSPTDG*GVTPMR
Trigger: TCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCT...TGACCTGACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCACTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTCGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACRCGRW*HCGSLR
Trigger: GCGGAGTGATCCGCAATGCCACCACCGGCCGCATCG...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGC +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWRCGRW*HCGSLR
Trigger: GCGGAGTGATCCGCAATGCCACCACCGGCCGCATCG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CAA 72 bp TGTTCCAGGAGACATTTAGGGGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSRRHLGARSLH*GLPAWRSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGCCCCTAAATGTCTCCTGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGAAGGGGACTTGGGGTaGAGGGTGCAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACEGDLG*RVQVGQ
Trigger: CTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGAAGGGGACTTGGGGTaGAGGGTGCAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGEREGDLG*RVQVGQ
Trigger: CTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACCGCCAGCCGAGTCTGTaGTCTCCCCGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHRQPSL*SPRCTR
Trigger: CCGTGTGCAGCGGGGAGATCACAGACTCGGCTGGCG...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTCGCCAGCCGAGTCTGTaGTCTCCCCGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: PPRWYIQEVEGQQEARSLRQPSL*SPRCTR
Trigger: CCGTGTGCAGCGGGGAGATCACAGACTCGGCTGGCG...AAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCTGGTAGCCCAGCACTaGGGTCCCGGGGTCCGACTG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVELVAQH*GPGVRL
Trigger: CAGTCGGACCCCGGGACCTCAGTGCTGGGCTACCAG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCTGGTAGCCCAGCACTaGGGTCCCGGGGTCCGACTG +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLLVAQH*GPGVRL
Trigger: CAGTCGGACCCCGGGACCTCAGTGCTGGGCTACCAG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCCTGGTAGCCCAGCACTaGGGTCCCGGGGTCCGACTG +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPLVAQH*GPGVRL
Trigger: CAGTCGGACCCCGGGACCTCAGTGCTGGGCTACCAG...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGGTAGCACTGGTAAGTaGCCACGGTGCCGTGCACTA +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASGSTGK*PRCRAL
Trigger: TAGTGCACGGCACCGTGGTCACTTACCAGTGCTACC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGCCCAGGCACACACTTaGTGCTGGCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWAQAHT*CWPGPS
Trigger: TGAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGGGCCCAGGCACACACTTaGTGCTGGCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NLGLDMRRRLCSTSPGSWAQAHT*CWPGPS
Trigger: TGAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGC...CCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR TCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCCTGGATCCCGATCCCTaGGCCCTGGGACACAACCTC +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLLDPDP*ALGHNL
Trigger: GAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGGCAGGAAGTCACCCTGGATCCCGATCCCTaGGCCCTGGGACACAACCTC +
Preference number: 4 (lower is better)
Translates to: DMRRRLCSTSPGSWQEVTLDPDP*ALGHNL
Trigger: GAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG...GGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTTGAGACAGGTGAGATaGCTGGCGCCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLLRQVR*LAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAA...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTGCGATGGGCTCTTCCAGCCATTGGGGATCTCAGGCAGCTCCGGACATGTGTCGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LRWALPAIGDLRQLRTCVVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...GACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCG +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPMRRRL*STSPGS
Trigger: CGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCACTCCAATGCGAGGGGTaGCCAGGCACACACTTGATG +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVALQCEG*PGTHLM
Trigger: CATCAAGTGTGTGCCTGGGCACCCCTCGCATTGGAG...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVGRWWH*GSLRRK
Trigger: CTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCC...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPGRWWH*GSLRRK
Trigger: CTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCC...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATACAGGGCGGCTGTCCTaGTTGGCCAGGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHTGRLS*LARRGR
Trigger: CCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGT...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACAGGGCGGCTGTCCTaGTTGGCCAGGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSTGRLS*LARRGR
Trigger: CCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGT...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCCCCTGGGCCTAGGGTaGGCACTGCCATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLPLGLG*ALPCWA
Trigger: GGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLPIPAP*DTTSAT
Trigger: GGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGG...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAEVMVP*IPIPAP
Trigger: GGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGCGCAGCAGGAAAGACTaGTTGGCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERRSRKD*LARGSG
Trigger: CCCACTGCCCCTGGCCAACCAGTCTTTCCTGCTGCG...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCGCAGCAGGAAAGACTaGTTGGCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWRSRKD*LARGSG
Trigger: CCCACTGCCCCTGGCCAACCAGTCTTTCCTGCTGCG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGACTCAGGGCCGCTTGGTaGGTGGGGCTGCGGATGACT +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGLRAAW*VGLRMT
Trigger: AGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAG...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCTCAGGGCCGCTTGGTaGGTGGGGCTGCGGATGACT +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLRAAW*VGLRMT
Trigger: AGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGNLRAA*WVGLRM
Trigger: CATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGGTGGCGGGAGGCTCTaGAACCTCAGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHGGGRL*NLRAAW
Trigger: CCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCGGTGGCGGGAGGCTCTaGAACCTCAGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAGGGRL*NLRAAW
Trigger: CCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACC...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAAGTTP*VEAGDS
Trigger: ACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGC...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGAAAGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VSCKAVVGIPDPKRGAGKVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...TTTCCCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTACGACCGTAGGGCTCTaGCCAGTTGGGAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPTTVGL*PVGREY
Trigger: GTACTCTCTCCCAACTGGCCAGAGCCCTACGGTCGT...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGLGLPA*RSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAA...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVAGALRP*HGLSCS
Trigger: GGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCC...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTCAGCATCCAGGGTGCTaGAGGCAGCAGGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGQHPGC*RQQVPW
Trigger: CCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTG...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVAMAAAM*AASRVL
Trigger: CAGCACCCTGGATGCTGCCCACATTGCAGCTGCCAT...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGCAGCGGGTGGTGGTTaGGCAGCTTCAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHAAGGG*AASRWG
Trigger: CCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTAAGCATAGGGGACTCTaGCTCCGGACTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACKHRGL*LRTPGS
Trigger: GGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTT...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGAAGCTGTGGAGGAGGTaGTGGTCCCCTGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWKLWRR*WSPGSR
Trigger: TCGGGATCCAGGGGACCATCACCTCCTCCACAGCTT...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGGGTGGGGCTGCGGATaGCTTGGCCCCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIGWGCG*LGPAAG
Trigger: TCCTGCTGCGGGGCCAAGTCATCCGCAGCCCCACCC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCGCCAGCCGAGTCTGTaGTCTCCCCGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVRQPSL*SPRCTR
Trigger: CCGTGTGCAGCGGGGAGATCACAGACTCGGCTGGCG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRTWGWI*GVGCAP
Trigger: TGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGT...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCGCCCAGGCACACACTTaGTGCTGGCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAAQAHT*CWPGPS
Trigger: TGAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGC...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GCTGCGATGGGCTCTTCCAGCCATTGGGGATCTCAGGCAGCTCCGGACATGTGTCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: AAMGSSSHWGSQAAPDMCLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...ACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCTACCGGGCGCATGGTaGTGGTTGCGGCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRLPGAW*WLRPRP
Trigger: AGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCTGGATCCCGATCCCTaGGCCCTGGGACACAACCTC +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVLDPDP*ALGHNL
Trigger: GAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACTGGATCCCGATCCCTaGGCCCTGGGACACAACCTC +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGLDPDP*ALGHNL
Trigger: GAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCTGGATCCCGATCCCTaGGCCCTGGGACACAACCTC +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVLDPDP*ALGHNL
Trigger: GAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGAAACCTTCTCAAAGTaGAGGTGTAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASETFSK*RCSRWP
Trigger: GGGCCAGCGGCTACACCTGCACTTTGAGAAGGTTTC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTCAGGCTGCGATGGGCTCTTCCAGCCATTGGGGATCTCAGGCAGCTCCGGACATGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: LRLRWALPAIGDLRQLRTWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...TGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACACTCCACTTGGGGCTaGCAGCCTGGCGATCATGGC +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGHSTWG*QPGDHG
Trigger: GCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGCACTCCACTTGGGGCTaGCAGCCTGGCGATCATGGC +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGHSTWG*QPGDHG
Trigger: GCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTG...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPGQHPG*WRQQVP
Trigger: AGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCC...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWACCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTCCTCTCCAGAATATaGCCACCCCCTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPLLSRI*PPPPLI
Trigger: GATAAGGGGAGGGGGTGGGCATATTCTGGAGAGGAG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAGRWWH*GSLRRK
Trigger: CTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCC...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCGRWWH*GSLRRK
Trigger: CTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCC...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCTGGCTGCTCAGGTGTaGGGGCTGCTGTCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLLAAQV*GLLSAR
Trigger: GCGAGCTGACAGCAGCCCCCACACCTGAGCAGCCAG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGCTGTTGTGACAAAGTaGACGCCTCGTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASAVVTK*TPRSGC
Trigger: GCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAGCTGTTGTGACAAAGTaGACGCCTCGTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVAAVVTK*TPRSGC
Trigger: GCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGC...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTTGGACTGGGGCTGAGTaGGTACCGCAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCWTGAE*VPQPWL
Trigger: CAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCA...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGACTGGGGCTGAGTaGGTACCGCAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGWTGAE*VPQPWL
Trigger: CAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCA...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACCCCTGGGCCTAGGGTaGGCACTGCCATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIPLGLG*ALPCWA
Trigger: GGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGG...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCAGGACCCTCTTGGGTTaGTGTCCAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGRTLLG*CPGSAG
Trigger: CCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCT...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTAGGACCCTCTTGGGTTaGTGTCCAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACRTLLG*CPGSAG
Trigger: CCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCT...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAEVMVP*IPIPAP
Trigger: GGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCEVMVP*IPIPAP
Trigger: GGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCGCAGCAGGAAAGACTaGTTGGCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTRSRKD*LARGSG
Trigger: CCCACTGCCCCTGGCCAACCAGTCTTTCCTGCTGCG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCGGGCTGCGGATGACTTaGCCCCGCAGCAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAGLRMT*PRSRKD
Trigger: GTCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCC...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGGCTGCGGATGACTTaGCCCCGCAGCAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGLRMT*PRSRKD
Trigger: GTCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGCTCAGGGCCGCTTGGTaGGTGGGGCTGCGGATGACT +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQLRAAW*VGLRMT
Trigger: AGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAG...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAGGTGGCGGGAGGCTCTaGAACCTCAGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPGGGRL*NLRAAW
Trigger: CCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACC...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGCCAGGGCCAGCCGGTaGCGGGAGGCTCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIARASR*REALEP
Trigger: AGGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGACGATGCGGCCGGTaGTGGCATTGCGGATCACCC +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHARRCGR*WHCGSP
Trigger: GGGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGTGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQCRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GCTGCGATGGGCTCTTCCAGCCATTGGGGATCTCAGGCAGCTCCGGACATGTGTGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AAMGSSSHWGSQAAPDMCGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...ACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGTCTCATTCCACTaGGGGTCGTGGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVASVSFH*GSWGST
Trigger: TGTTGACCCCCACGACCCCCAGTGGAATGAGACAGA...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCCACGGCTCGGCAGGCTaGCTCTGTCTCATTCCACTG +
Preference number: 4 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCHGSAG*LCLIPL
Trigger: CAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTG...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGCACGGCTCGGCAGGCTaGCTCTGTCTCATTCCACTG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERHGSAG*LCLIPL
Trigger: CAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTG...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTCACGGCTCGGCAGGCTaGCTCTGTCTCATTCCACTG +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGHGSAG*LCLIPL
Trigger: CAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTG...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGAGGGCTCTGGCCAGTTaGGAGAGAGTACCACGCCAG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWRALAS*ERVPRQ
Trigger: CTGGCGTGGTACTCTCTCCCAACTGGCCAGAGCCCT...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACGGGGCCCTGAGTACTaGCCCAGAACCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIRGPEY*PRTRAV
Trigger: GACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCG...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGGTCACTCCACTTGGGGCTGCCAGCCTGGCGATCATGGCAGGTGAGGATGGAGGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: RSLHLGLPAWRSWQVRMEVKSLK*LRGPEY
Trigger: GTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC...CTCCATCCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGCTCTTCCAGCCATTaGGGATCTCAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLGSSSH*GSQAAP
Trigger: CGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCC...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTCCAGCCTGGCGATCATaGCAGGTGAGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRPAWRS*QVRMEL
Trigger: CAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGG...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLGLPA*RSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAA...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACAGCATCCAGGGTGCTaGAGGCAGCAGGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPQHPGC*RQQVPW
Trigger: CCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTG...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGCGATGGGCTCTTCCAGCCATTGGGGATCTCAGGCAGCTCCGGACATGTGTCCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRWALPAIGDLRQLRTCVHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...GACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGC +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSRCGRW*HCGSLR
Trigger: GCGGAGTGATCCGCAATGCCACCACCGGCCGCATCG...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTCGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGC +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSRCGRW*HCGSLR
Trigger: GCGGAGTGATCCGCAATGCCACCACCGGCCGCATCG...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTC +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSRRCGR*WHCGSL
Trigger: GAGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTC +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGRRCGR*WHCGSL
Trigger: GAGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACRRCGR*WHCGSL
Trigger: GAGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGCAGCGGGTGGTGGTTaGGCAGCTTCAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQAAGGG*AASRWG
Trigger: CCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGC...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGTCCTTGGACTGGGGCTaGGTGGGTACCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLSLDWG*VGTAAM
Trigger: CATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGA...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGTCCTTGGACTGGGGCTaGGTGGGTACCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVESLDWG*VGTAAM
Trigger: CATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGA...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGAAGCATAGGGGACTCTaGCTCCGGACTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVKHRGL*LRTPGS
Trigger: GGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTT...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACAAGCATAGGGGACTCTaGCTCCGGACTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHKHRGL*LRTPGS
Trigger: GGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTT...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTCCTCATCATCTCCTaGAGCTGTGGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLLLIIS*SCGGGD
Trigger: ATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHADGLL*IPEGLG
Trigger: ACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGC...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAGGTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: RGFLQSCGRDPGPKERGRSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...CCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR TCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGTGGCTACGGGGCCCTaGGTACTGGCCCAGAACCCG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRVATGP*VLAQNP
Trigger: CGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCAC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGGTAGCACTGGTAAGTaGCCACGGTGCCGTGCACTA +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERGSTGK*PRCRAL
Trigger: TAGTGCACGGCACCGTGGTCACTTACCAGTGCTACC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGAGTCACCCTCTGGCATaGGGGCAGGTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQSHPLA*GQVLTP
Trigger: TGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACT...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHATWGWI*GVGCAP
Trigger: TGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVTWGWI*GVGCAP
Trigger: TGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGT...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLTWGWI*GVGCAP
Trigger: TGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGT...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPGDHGR*GWSCPS
Trigger: TGATGGGCAGCTCCATCCTCACCTGCCATGATCGCC...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGGCCCAGGCACACACTTaGTGCTGGCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGAQAHT*CWPGPS
Trigger: TGAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGC...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCATTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTACTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCCTCAGGTGTGGGGGCTaGTGTCAGCTCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWALRCGG*CQLAIC
Trigger: ACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAG...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTCTCAGGTGTGGGGGCTaGTGTCAGCTCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCLRCGG*CQLAIC
Trigger: ACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAG...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACACGCCTCGTTCTGGCTaGTCAGGTGTGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHTPRSG*SGVGAA
Trigger: AGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGT...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCACTGGGACACAACCTCTaGAACCCACGGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSLGHNL*NPRPSH
Trigger: ATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAG...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATATATTGCACGGTGGCCCCCACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGGGACACAACCTCTaGAACCCACGGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: IYCTVAPTGNLGLDMRRRLGHNL*NPRPSH
Trigger: ATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAG...CCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCACCGTGCAATATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTTGAGACAGGTGAGATaGCTGGCGCCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWLRQVR*LAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAA...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGCACTAGCTCAGGCTaGGATGGGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRCTSSG*DGLFQP
Trigger: TGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTGCACTAGCTCAGGCTaGGATGGGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGCTSSG*DGLFQP
Trigger: TGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCG +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGMRRRL*STSPGS
Trigger: CGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERMRRRL*STSPGS
Trigger: CGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCACTCCACTTGGGGCTaGCAGCCTGGCGATCATGGC +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHHSTWG*QPGDHG
Trigger: GCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGCCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWPAGCS*FSGLRA
Trigger: TGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGG...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCGCCGCAAGCAGCGATaGAGACGGGCTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWRRKQR*RRAPLN
Trigger: ATTCAAAGGAGCCCGTCTGCATCGCTGCTTGCGGCG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGTGGACGCCTCGTTCTaGCTGCTCAGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVVDASF*LLRCGG
Trigger: GCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCAC...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCGTGGACGCCTCGTTCTaGCTGCTCAGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECVDASF*LLRCGG
Trigger: GCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCAC...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGGCGGCTGTCCTGGTTaGCCAGGCGGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELGGCPG*PGGEGD
Trigger: GTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACTGGACTGGGGCTGAGTaGGTACCGCAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHWTGAE*VPQPWL
Trigger: CAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCA...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGGACTGGGGCTGAGTaGGTACCGCAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPWTGAE*VPQPWL
Trigger: CAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCA...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTAGGACCCTCTTGGGTTaGTGTCCAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVRTLLG*CPGSAG
Trigger: CCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCT...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCAGGACCCTCTTGGGTTaGTGTCCAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTRTLLG*CPGSAG
Trigger: CCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCT...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHEVMVP*IPIPAP
Trigger: GGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTGGGCTGCGGATGACTTaGCCCCGCAGCAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSGLRMT*PRSRKD
Trigger: GTCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCC...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGGGGCTGCGGATGACTTaGCCCCGCAGCAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLGLRMT*PRSRKD
Trigger: GTCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCC...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTGGGCTGCGGATGACTTaGCCCCGCAGCAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSGLRMT*PRSRKD
Trigger: GTCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCC...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGCTCAGGGCCGCTTGGTaGGTGGGGCTGCGGATGACT +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQLRAAW*VGLRMT
Trigger: AGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAG...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQNLRAA*WVGLRM
Trigger: CATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTT...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGNLRAA*WVGLRM
Trigger: CATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTT...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQNLRAA*WVGLRM
Trigger: CATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTT...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCACATCTCCATAAGCTaGACGACGGGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPHISIS*TTGKVA
Trigger: TGCCACTTTCCCCGTCGTCCAGCTTATGGAGATGTG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHAGTTP*VEAGDS
Trigger: ACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNAGTTP*VEAGDS
Trigger: ACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGC...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTTCAGCTGGTAGCCAGTaGCACAATGGAAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGSAGSQ*HNGSGH
Trigger: GTGCCCGCTTCCATTGTGCCACTGGCTACCAGCTGA...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTGAATCCCAGAAGGGCTaGGTGGCATTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPESQKG*VALRQV
Trigger: CACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTC...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATCGATGCGGCCGGTGGTaGCATTGCGGATCACCCCTG +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHRCGRW*HCGSPL
Trigger: CAGGGGTGATCCGCAATGCCACCACCGGCCGCATCG...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPVAREA*RDDAAG
Trigger: ACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAAC...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAATGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKCRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAGGTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGFLQSCGRDPGPKERGRGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...CCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACACGGCTCGGCAGGCTaGCTCTGTCTCATTCCACTG +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGHGSAG*LCLIPL
Trigger: CAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTAGGGCTCTGGCCAGTTaGGAGAGAGTACCACGCCAG +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCRALAS*ERVPRQ
Trigger: CTGGCGTGGTACTCTCTCCCAACTGGCCAGAGCCCT...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAGGCTCTTCCAGCCATTaGGGATCTCAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGGSSSH*GSQAAP
Trigger: CGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCC...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACCCAGCCTGGCGATCATaGCAGGTGAGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHPAWRS*QVRMEL
Trigger: CAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGG...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGACCAGCCTGGCGATCATaGCAGGTGAGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGPAWRS*QVRMEL
Trigger: CAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGG...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTACACACGAGAAGTGGATaGTGGCCCCTGCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLHTRSG*WPLLGV
Trigger: TACACCCAGCAGGGGCCACCATCCACTTCTCGTGTG...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGCAGCATCCAGGGTGCTaGAGGCAGCAGGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGQHPGC*RQQVPW
Trigger: CCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTG...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSMAAAM*AASRVL
Trigger: CAGCACCCTGGATGCTGCCCACATTGCAGCTGCCAT...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTC +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHRRCGR*WHCGSL
Trigger: GAGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGAGGCAGCAGGTGCCTTaGCAACAGCCCTACAGATGG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERRQQVP*QQPYRW
Trigger: CCATCTGTAGGGCTGTTGCCAAGGCACCTGCTGCCT...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442608.7
CDS-3UTR TCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACTCTAAAGAGAGTCCGTaGGCCAGGAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHSKESP*ARSASS
Trigger: GCTGCTGGCGCTCCTGGCTCACGGACTCTCTTTAGA...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGCAGCGGGTGGTGGTTaGGCAGCTTCAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGAAGGG*AASRWG
Trigger: CCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGAAGGGGACTTGGGGTaGAGGGTGCAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQEGDLG*RVQVGQ
Trigger: CTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTCCTTGGACTGGGGCTaGGTGGGTACCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLSLDWG*VGTAAM
Trigger: CATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGA...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCAAGCTGTGGAGGAGGTaGTGGTCCCCTGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTKLWRR*WSPGSR
Trigger: TCGGGATCCAGGGGACCATCACCTCCTCCACAGCTT...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGAAGCTGTGGAGGAGGTaGTGGTCCCCTGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEKLWRR*WSPGSR
Trigger: TCGGGATCCAGGGGACCATCACCTCCTCCACAGCTT...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWLGGGW*QSHLHK
Trigger: CTTATGGAGATGTGACTGTCACCAGCCTCCACCCAG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGADGLL*IPEGLG
Trigger: ACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGC...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKADGLL*IPEGLG
Trigger: ACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGC...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGAAAGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSCKAVVGIPDPKRGAGKASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...TTTCCCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR TCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCGCCAGCCGAGTCTGTaGTCTCCCCGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELRQPSL*SPRCTR
Trigger: CCGTGTGCAGCGGGGAGATCACAGACTCGGCTGGCG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCCCTCAAAGAAGTGGATaGCGAAGCCCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCPQRSG*RSPAGS
Trigger: GCTACCAGCAGGGCTTCGTCATCCACTTCTTTGAGG...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTACCTCAAAGAAGTGGATaGCGAAGCCCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLPQRSG*RSPAGS
Trigger: GCTACCAGCAGGGCTTCGTCATCCACTTCTTTGAGG...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGTAGCACTGGTAAGTaGCCACGGTGCCGTGCACTA +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCGSTGK*PRCRAL
Trigger: TAGTGCACGGCACCGTGGTCACTTACCAGTGCTACC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQTWGWI*GVGCAP
Trigger: TGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGT...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHGDHGR*GWSCPS
Trigger: TGATGGGCAGCTCCATCCTCACCTGCCATGATCGCC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTGACCATGGCATGGCTTaGGCTGTTCCAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPDHGMA*AVPGDI
Trigger: AATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTC...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGGCCCAGGCACACACTTaGTGCTGGCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRAQAHT*CWPGPS
Trigger: TGAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGC...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTACGCCTCGTTCTGGCTaGTCAGGTGTGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVTPRSG*SGVGAA
Trigger: AGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGT...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCTGGGACACAACCTCTaGAACCCACGGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLGHNL*NPRPSH
Trigger: ATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHNGNGR*QGQPVA
Trigger: CGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATT...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTNGNGR*QGQPVA
Trigger: CGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATT...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGNGNGR*QGQPVA
Trigger: CGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATT...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSNGNGR*QGQPVA
Trigger: CGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATT...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGATTGAGACAGGTGAGATaGCTGGCGCCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGLRQVR*LAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAA...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTGAAACCTTCTCAAAGTaGAGGTGTAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRETFSK*RCSRWP
Trigger: GGGCCAGCGGCTACACCTGCACTTTGAGAAGGTTTC...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCTGCACTAGCTCAGGCTaGGATGGGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLCTSSG*DGLFQP
Trigger: TGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCTGCACTAGCTCAGGCTaGGATGGGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTCTSSG*DGLFQP
Trigger: TGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGTGACCACGGTGCCGTaGACTAGCTCAGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTVTTVP*TSSGCD
Trigger: ATCGCAGCCTGAGCTAGTGCACGGCACCGTGGTCAC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCG +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQMRRRL*STSPGS
Trigger: CGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCG +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCMRRRL*STSPGS
Trigger: CGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPPAGCS*FSGLRA
Trigger: TGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGG...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCTCCAATGCGAGGGGTaGCCAGGCACACACTTGATG +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLQCEG*PGTHLM
Trigger: CATCAAGTGTGTGCCTGGGCACCCCTCGCATTGGAG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRGQHPG*WRQQVP
Trigger: AGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVGQHPG*WRQQVP
Trigger: AGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWALPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGCTCCTCTCCAGAATATaGCCACCCCCTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWLLSRI*PPPPLI
Trigger: GATAAGGGGAGGGGGTGGGCATATTCTGGAGAGGAG...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGGACGCCTCGTTCTaGCTGCTCAGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGVDASF*LLRCGG
Trigger: GCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCAC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGGCTGTCCTGGTTaGCCAGGCGGGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENGGCPG*PGGEGD
Trigger: GTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGTACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGYRSHG*SGAGKD
Trigger: GTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTA...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAAGGACCCTCTTGGGTTaGTGTCCAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKRTLLG*CPGSAG
Trigger: CCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCT...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQPIPAP*DTTSAT
Trigger: GGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGG...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGEVMVP*IPIPAP
Trigger: GGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGCAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGQGPGV*TVVMVV
Trigger: CACCACCATCACCACAGTCCAGACACCAGGCCCTTG...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCGGAGGCTGATATTCTaGACCTTGATTTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLRRLIF*TLISTP
Trigger: TGGCGTGGAAATCAAGGTCCAGAATATCAGCCTCCG...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GATGGAGCTGCCCATCAGCACAAAACCCTGGTCACAGATATATTGCACGGTGGCCGCAGCAGGAAAGACTaGTTGGCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DGAAHQHKTLVTDILHGGRSRKD*LARGSG
Trigger: CCCACTGCCCCTGGCCAACCAGTCTTTCCTGCTGCG...GCCACCGTGCAATATATCTGTGACCAGGGTTTTGTGCTGATGGGCAGCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVAGTTP*VEAGDS
Trigger: ACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGTCAGCTGGTAGCCAGTaGCACAATGGAAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVSAGSQ*HNGSGH
Trigger: GTGCCCGCTTCCATTGTGCCACTGGCTACCAGCTGA...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCATCAGCTGGTAGCCAGTaGCACAATGGAAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPSAGSQ*HNGSGH
Trigger: GTGCCCGCTTCCATTGTGCCACTGGCTACCAGCTGA...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGAATCCCAGAAGGGCTaGGTGGCATTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWESQKG*VALRQV
Trigger: CACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCATGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: ENLFPWTIGPGSRQRFPACRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...TGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGATTCCACTGGGGGTCGTaGGGGTCAACACACTCGATG +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGFHWGS*GSTHSM
Trigger: CATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAA...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCTTCCACTGGGGGTCGTaGGGGTCAACACACTCGATG +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAFHWGS*GSTHSM
Trigger: CATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAA...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGTCTGTCTCATTCCACTaGGGGTCGTGGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERSVSFH*GSWGST
Trigger: TGTTGACCCCCACGACCCCCAGTGGAATGAGACAGA...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGAAGTCACCCTCTGGCATGAGGGCAGGTCCTCACTCCAAGTTAGGTCCCACTCTGTCTCATTCCACTaGGGGTCGTGGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: QEVTLWHEGRSSLQVRSHSVSFH*GSWGST
Trigger: TGTTGACCCCCACGACCCCCAGTGGAATGAGACAGA...GTGGGACCTAACTTGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCACGGCTCGGCAGGCTaGCTCTGTCTCATTCCACTG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEHGSAG*LCLIPL
Trigger: CAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCACGGCTCGGCAGGCTaGCTCTGTCTCATTCCACTG +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSHGSAG*LCLIPL
Trigger: CAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTG...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAACGACCGTAGGGCTCTaGCCAGTTGGGAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGTTVGL*PVGREY
Trigger: GTACTCTCTCCCAACTGGCCAGAGCCCTACGGTCGT...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTGGCTCTTCCAGCCATTaGGGATCTCAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSGSSSH*GSQAAP
Trigger: CGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCC...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCAAGTTAGGTCCCACTaGCACATGAGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPQVRSH*HMRTLD
Trigger: ATCCAGTGTCCTCATGTGCCAGTGGGACCTAACTTG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHLGLPA*RSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAA...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLLGLPA*RSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAA...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGALRP*HGLSCS
Trigger: GGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAGALRP*HGLSCS
Trigger: GGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCC...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCACACGAGAAGTGGATaGTGGCCCCTGCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVHTRSG*WPLLGV
Trigger: TACACCCAGCAGGGGCCACCATCCACTTCTCGTGTG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGA +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGSPTDG*GVTPMR
Trigger: TCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTAGGCAGCAGGTGCCTTaGCAACCATCCAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSRQQVP*QPSRLR
Trigger: TCGCAGCCTGGATGGTTGCCAAGGCACCTGCTGCCT...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCAGCATCCAGGGTGCTaGAGGCAGCAGGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNQHPGC*RQQVPW
Trigger: CCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTG...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCAAACGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGC +
Preference number: 4 (lower is better)
Translates to: EFIPLDHRAWVQAEVSCKRCGRW*HCGSLR
Trigger: GCGGAGTGATCCGCAATGCCACCACCGGCCGCATCG...TTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGAGGCAGCAGGTGCCTTaGCAACATCCAGGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVERQQVP*QHPGCD
Trigger: GTCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCT...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGAAAGAAGGAGTGACAGCATaGAGGCAGAGAGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VSCKAVVGIPDPKRGAGKEGVTA*RQRGVG
Trigger: CCCTACCCCTCTCTGCCTCCATGCTGTCACTCCTTC...TTTCCCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR CAA 72 bp ATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATA +
Preference number: 4 (lower is better)
Translates to: MVGIAGGEGHNF*RAWWHLLLGGI
Trigger: TATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
3UTR CAA 72 bp GCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: ARTTQRSPLRGV*AIGDGAVRSTL
Trigger: CAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
3UTR CAA 72 bp CCATTGGGGATCTCAGGCAGCTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAGTGGATGACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PLGISGSSGHVS*RGTSKKWMTKP
Trigger: GGGCTTCGTCATCCACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGAGCTGCCTGAGATCCCCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 72 bp TGCACTAGCTCAGGCTGCGATGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCCGGACATGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: CTSSGCDGLFQP*GISGSSGHVSL
Trigger: CAATGACACATGTCCGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
3UTR CAA 72 bp TCACAGATATATTGCACGGTGGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SQIYCTVAPTGN*GLDMRRRLCST
Trigger: TGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTTCTAAAGAGAGTCCGTaGGCCAGGAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGSKESP*ARSASS
Trigger: GCTGCTGGCGCTCCTGGCTCACGGACTCTCTTTAGA...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCATCTAAAGAGAGTCCGTaGGCCAGGAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPSKESP*ARSASS
Trigger: GCTGCTGGCGCTCCTGGCTCACGGACTCTCTTTAGA...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR TCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGTCTAAAGAGAGTCCGTaGGCCAGGAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQSKESP*ARSASS
Trigger: GCTGCTGGCGCTCCTGGCTCACGGACTCTCTTTAGA...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAAGGGGACTTGGGGTaGAGGGTGCAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVEGDLG*RVQVGQ
Trigger: CTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATAAGCATAGGGGACTCTaGCTCCGGACTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNKHRGL*LRTPGS
Trigger: GGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTT...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540632.6
CDS-3UTR TCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGAAGCTGTGGAGGAGGTaGTGGTCCCCTGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRKLWRR*WSPGSR
Trigger: TCGGGATCCAGGGGACCATCACCTCCTCCACAGCTT...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATAAGCTGTGGAGGAGGTaGTGGTCCCCTGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHKLWRR*WSPGSR
Trigger: TCGGGATCCAGGGGACCATCACCTCCTCCACAGCTT...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCTCCTCATCATCTCCTaGAGCTGTGGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWLLIIS*SCGGGD
Trigger: ATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTCTCCTCATCATCTCCTaGAGCTGTGGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGLLIIS*SCGGGD
Trigger: ATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAG...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGCTCCTCATCATCTCCTaGAGCTGTGGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERLLIIS*SCGGGD
Trigger: ATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAG...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLRALWA*EIPATR
Trigger: CCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCT...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTCTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCLGGGW*QSHLHK
Trigger: CTTATGGAGATGTGACTGTCACCAGCCTCCACCCAG...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPLGGGW*QSHLHK
Trigger: CTTATGGAGATGTGACTGTCACCAGCCTCCACCCAG...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHADGLL*IPEGLG
Trigger: ACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGC...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTLGCPA*CACPLP
Trigger: TGGAAGAGGACAAGCGCATCATGCTGGACATCCGAG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTCTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCLGCPA*CACPLP
Trigger: TGGAAGAGGACAAGCGCATCATGCTGGACATCCGAG...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTAGTCACCCTCTGGCATaGGGGCAGGTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVSHPLA*GQVLTP
Trigger: TGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACT...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCACTTGGGGCTGGATATaGGGCGTCGGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECTWGWI*GVGCAP
Trigger: TGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGT...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVGDHGR*GWSCPS
Trigger: TGATGGGCAGCTCCATCCTCACCTGCCATGATCGCC...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGCCCAGGCACACACTTaGTGCTGGCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGAQAHT*CWPGPS
Trigger: TGAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAILTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTCAGGGAAGCCCAACCTaGGGTGGGGGTAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GRTVQNFRELETSQEADVQGSPT*GGGRVP
Trigger: GGGGACCCTACCCCCACCTCAGGTTGGGCTTCCCTG...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GACTTGGAAGGAGTGACAGCATGGAGGCAGAGAGGGGTAGGGTGTGGGAGAAAGGGCCTAAGTACTGAGTaGGCAGGGGCTGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: DLEGVTAWRQRGVGCGRKGLSTE*AGADLE
Trigger: TTCCAAGTCAGCCCCTGCTCACTCAGTACTTAGGCC...CTTTCTCCCACACCCTACCCCTCTCTGCCTCCATGCTGTCACTCCTTCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR GCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCATCTGTCTCCTCGATaGCTGGGGCTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVHLSPR*LGLVLS
Trigger: GGAAAGGACAAGCCCCAGGCATCGAGGAGACAGATG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCTCAGGTGTGGGGGCTaGTGTCAGCTCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVLRCGG*CQLAIC
Trigger: ACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCACGCCTCGTTCTGGCTaGTCAGGTGTGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGTPRSG*SGVGAA
Trigger: AGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGT...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGACGCCTCGTTCTGGCTaGTCAGGTGTGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRTPRSG*SGVGAA
Trigger: AGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACTGGATCCCGATCCCTaGGCCCTGGGACACAACCTC +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYILDPDP*ALGHNL
Trigger: GAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVNGNGR*QGQPVA
Trigger: CGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATT...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GACTTGGAAGGAGTGACAGCATGGAGGCAGAGAGGGGTAGGGTGTGGGAGAAAGGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: DLEGVTAWRQRGVGCGRKGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...CTTTCTCCCACACCCTACCCCTCTCTGCCTCCATGCTGTCACTCCTTCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR GCA 90 bp GAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCAAAGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: EFIPLDHRAWVQAEVSCKGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...TTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR GCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTTTGTCCTCTTCCACATaGACACCCCAGATACAATCC +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPLSSST*TPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAA...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCACCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTTGCACTAGCTCAGGCTaGGATGGGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSCTSSG*DGLFQP
Trigger: TGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTTGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAPAGCS*FSGLRA
Trigger: TGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGG...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCTCCAATGCGAGGGGTaGCCAGGCACACACTTGATG +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCLQCEG*PGTHLM
Trigger: CATCAAGTGTGTGCCTGGGCACCCCTCGCATTGGAG...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGGCAACCATCCAGGCTaGGACTGTTGTAGAACCATC +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWGNHPG*DCCRTI
Trigger: GATGGTTCTACAACAGTCGCAGCCTGGATGGTTGCC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR GCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGCTGGAGGCAGCAGGTaGCTTGGCAACCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIAGGSR*LGNHPG
Trigger: GCCTGGATGGTTGCCAAGGCACCTGCTGCCTCCAGC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR GCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTCTTCCCACAGGTAGATaGCCCCTGACATGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLLPTGR*PLTWAQ
Trigger: TTGGGCCCATGTCAGGGGGCATCTACCTGTGGGAAG...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCTGCTGCAGGTTGCCATaGCAGGGCGGGATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGCCRLP*QGGMVV
Trigger: GACCACCATCCCGCCCTGGCATGGCAACCTGCAGCA...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGCTCCTCTCCAGAATATaGCCACCCCCTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQLLSRI*PPPPLI
Trigger: GATAAGGGGAGGGGGTGGGCATATTCTGGAGAGGAG...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCGCCGCAAGCAGCGATaGAGACGGGCTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCRRKQR*RRAPLN
Trigger: ATTCAAAGGAGCCCGTCTGCATCGCTGCTTGCGGCG...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTTCAAGCAGCGGGTGGTaGTTGAGCAGCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVSSSGW*LSSFKV
Trigger: CACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGA...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGTCCTCAAGCAGCGGGTaGTGGTTGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGSSSSG*WLSSFK
Trigger: CTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGA...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATTACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHYRSHG*SGAGKD
Trigger: GTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTA...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATAGGACCCTCTTGGGTTaGTGTCCAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHRTLLG*CPGSAG
Trigger: CCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCT...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWPIPAP*DTTSAT
Trigger: GGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGCAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGQGPGV*TVVMVV
Trigger: CACCACCATCACCACAGTCCAGACACCAGGCCCTTG...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCGCAGCAGGAAAGACTaGTTGGCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRRSRKD*LARGSG
Trigger: CCCACTGCCCCTGGCCAACCAGTCTTTCCTGCTGCG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELAGTTP*VEAGDS
Trigger: ACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCATCAGCTGGTAGCCAGTaGCACAATGGAAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPSAGSQ*HNGSGH
Trigger: GTGCCCGCTTCCATTGTGCCACTGGCTACCAGCTGA...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTTGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFCRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCTGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPCRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATAGGGCTCTGGCCAGTTaGGAGAGAGTACCACGCCAG +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHRALAS*ERVPRQ
Trigger: CTGGCGTGGTACTCTCTCCCAACTGGCCAGAGCCCT...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGAGGGCTCTGGCCAGTTaGGAGAGAGTACCACGCCAG +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQRALAS*ERVPRQ
Trigger: CTGGCGTGGTACTCTCTCCCAACTGGCCAGAGCCCT...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAAGGGCTCTGGCCAGTTaGGAGAGAGTACCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPRALAS*ERVPRQ
Trigger: CTGGCGTGGTACTCTCTCCCAACTGGCCAGAGCCCT...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCAGGAAGTCACCCTCTaGCATGAGGGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAQEVTL*HEGRSS
Trigger: TGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGAAGTCACCCTCTaGCATGAGGGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLQEVTL*HEGRSS
Trigger: TGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCAGGAAGTCACCCTCTaGCATGAGGGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHQEVTL*HEGRSS
Trigger: TGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAACAGGAAGTCACCCTCTaGCATGAGGGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKQEVTL*HEGRSS
Trigger: TGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCCAGCCTGGCGATCATaGCAGGTGAGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNPAWRS*QVRMEL
Trigger: CAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGG...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERTETMA*LELFQE
Trigger: CTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGT...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWTETMA*LELFQE
Trigger: CTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGT...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPGALRP*HGLSCS
Trigger: GGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCC...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCACACGAGAAGTGGATaGTGGCCCCTGCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLHTRSG*WPLLGV
Trigger: TACACCCAGCAGGGGCCACCATCCACTTCTCGTGTG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGA +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLSPTDG*GVTPMR
Trigger: TCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCT...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLMAAAM*AASRVL
Trigger: CAGCACCCTGGATGCTGCCCACATTGCAGCTGCCAT...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGACCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGC +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELRCGRW*HCGSLR
Trigger: GCGGAGTGATCCGCAATGCCACCACCGGCCGCATCG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTC +
Preference number: 4 (lower is better)
Translates to: LENLFPWTIGPGSRQRFPRRCGR*WHCGSL
Trigger: GAGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...AGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGAGGCAGCAGGTGCCTTaGCAACATCCAGGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRRQQVP*QHPGCD
Trigger: GTCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCT...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCAGAGAGGGGTAGGGTGTaGGAGAAAGACCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: ENLFPWTIGPGSRQRFPAERGRV*EKDPRP
Trigger: GGGCCTAGGGTCTTTCTCCCACACCCTACCCCTCTC...TGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
3UTR CAA 72 bp AGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSLAAGLWCKSE*TSLDCPHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000540419.5
3UTR CAA 72 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGGTGGTATATACAGGAG +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEG*VASPPRWYIQE
Trigger: CTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGCAGCGGGTGGTGGTTaGGCAGCTTCAAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENAAGGG*AASRWG
Trigger: CCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGAAGCTGTGGAGGAGGTaGTGGTCCCCTGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVKLWRR*WSPGSR
Trigger: TCGGGATCCAGGGGACCATCACCTCCTCCACAGCTT...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSRALWA*EIPATR
Trigger: CCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCT...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVELGGGW*QSHLHK
Trigger: CTTATGGAGATGTGACTGTCACCAGCCTCCACCCAG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTCTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLLGGGW*QSHLHK
Trigger: CTTATGGAGATGTGACTGTCACCAGCCTCCACCCAG...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGADGLL*IPEGLG
Trigger: ACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCLGCPA*CACPLP
Trigger: TGGAAGAGGACAAGCGCATCATGCTGGACATCCGAG...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVELGCPA*CACPLP
Trigger: TGGAAGAGGACAAGCGCATCATGCTGGACATCCGAG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCCTCAAAGAAGTGGATaGCGAAGCCCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHPQRSG*RSPAGS
Trigger: GCTACCAGCAGGGCTTCGTCATCCACTTCTTTGAGG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTAGTCACCCTCTGGCATaGGGGCAGGTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFSHPLA*GQVLTP
Trigger: TGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACT...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGAGTCACCCTCTGGCATaGGGGCAGGTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVSHPLA*GQVLTP
Trigger: TGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACT...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCGGCGATCATGGCAGGTaGGGATGGAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPGDHGR*GWSCPS
Trigger: TGATGGGCAGCTCCATCCTCACCTGCCATGATCGCC...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCAGGTAGATGCCCCCTaGCATGGGCCCAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRQVDAP*HGPNEG
Trigger: CCCTTCATTGGGCCCATGTCAGGGGGCATCTACCTG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCGGCTGGTCCAGGGCATaGGGAGGCTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGGWSRA*GGSGCW
Trigger: CCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCC...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATCTGTCTCCTCGATaGCTGGGGCTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCHLSPR*LGLVLS
Trigger: GGAAAGGACAAGCCCCAGGCATCGAGGAGACAGATG...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCTCAGGTGTGGGGGCTaGTGTCAGCTCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGLRCGG*CQLAIC
Trigger: ACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAG...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGCTGGGACACAACCTCTaGAACCCACGGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQLGHNL*NPRPSH
Trigger: ATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAG...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGAAGATGGCAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EVYTSYQQHHRHQWQEDGNGNGR*QGQPVA
Trigger: CGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATT...GCCATCTTCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATGGTGACATCAGCCATGGAGGTAAAGAGCTTGAAGTGGCTACGGGGCCCTGAGGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: MVTSAMEVKSLKWLRGPEGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...CTCAGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCATGGCTGATGTCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGGAAACCTTCTCAAAGTaGAGGTGTAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEETFSK*RCSRWP
Trigger: GGGCCAGCGGCTACACCTGCACTTTGAGAAGGTTTC...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELGHACS*PAAVST
Trigger: AGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCCCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTTGCACTAGCTCAGGCTaGGATGGGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVCTSSG*DGLFQP
Trigger: TGGCTGGAAGAGCCCATCGCAGCCTGAGCTAGTGCA...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCG +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIMRRRL*STSPGS
Trigger: CGATCCTGGAGATGTGGAGCACAGCCGACGCCTCAT...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCTGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCTGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCACACTCCACTTGGGGCTaGCAGCCTGGCGATCATGGC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPHSTWG*QPGDHG
Trigger: GCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTG...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGCCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQPAGCS*FSGLRA
Trigger: TGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGG...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GATGGAGCTGCCCATCAGCACAAAACCCTGGTCACAGATATATTGCACGGTGGCCCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: DGAAHQHKTLVTDILHGGPAGCS*FSGLRA
Trigger: TGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGG...GCCACCGTGCAATATATCTGTGACCAGGGTTTTGTGCTGATGGGCAGCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCTCCAATGCGAGGGGTaGCCAGGCACACACTTGATG +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVLQCEG*PGTHLM
Trigger: CATCAAGTGTGTGCCTGGGCACCCCTCGCATTGGAG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCTCCAATGCGAGGGGTaGCCAGGCACACACTTGATG +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNLQCEG*PGTHLM
Trigger: CATCAAGTGTGTGCCTGGGCACCCCTCGCATTGGAG...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWALTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NPAAGCHARAGWWSCGERGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGCGCCGCAAGCAGCGATaGAGACGGGCTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQRRKQR*RRAPLN
Trigger: ATTCAAAGGAGCCCGTCTGCATCGCTGCTTGCGGCG...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGGCTGTTGTGACAAAGTaGACGCCTCGTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLAVVTK*TPRSGC
Trigger: GCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGC...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGTCAAGCAGCGGGTGGTaGTTGAGCAGCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVESSSGW*LSSFKV
Trigger: CACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGA...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTTCCTCAAGCAGCGGGTaGTGGTTGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSSSSSG*WLSSFK
Trigger: CTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGA...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR CCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCTCCTCAAGCAGCGGGTaGTGGTTGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTSSSSG*WLSSFK
Trigger: CTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGA...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS-3UTR CCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTTACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVYRSHG*SGAGKD
Trigger: GTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTA...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGEVMVP*IPIPAP
Trigger: GGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLQGPGV*TVVMVV
Trigger: CACCACCATCACCACAGTCCAGACACCAGGCCCTTG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCGCAGCAGGAAAGACTaGTTGGCCAGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELRSRKD*LARGSG
Trigger: CCCACTGCCCCTGGCCAACCAGTCTTTCCTGCTGCG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACACATCTCCATAAGCTaGACGACGGGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPHISIS*TTGKVA
Trigger: TGCCACTTTCCCCGTCGTCCAGCTTATGGAGATGTG...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGTCAGCTGGTAGCCAGTaGCACAATGGAAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQSAGSQ*HNGSGH
Trigger: GTGCCCGCTTCCATTGTGCCACTGGCTACCAGCTGA...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GATGGAGCTGCCCATCAGCACAAAACCCTGGTCACAGATATATTGCACGGTGGCTCAGCTGGTAGCCAGTaGCACAATGGAAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: DGAAHQHKTLVTDILHGGSAGSQ*HNGSGH
Trigger: GTGCCCGCTTCCATTGTGCCACTGGCTACCAGCTGA...GCCACCGTGCAATATATCTGTGACCAGGGTTTTGTGCTGATGGGCAGCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGAATCCCAGAAGGGCTaGGTGGCATTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKESQKG*VALRQV
Trigger: CACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTC...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCCCAGAAGGGCTaGGTGGCATTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPESQKG*VALRQV
Trigger: CACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTC...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTGAATCCCAGAAGGGCTaGGTGGCATTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSESQKG*VALRQV
Trigger: CACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTC...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTATTGCGGATCACCCCTaGGCACTCACCGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVIADHP*ALTDAD
Trigger: GTCTGCATCGGTGAGTGCCCAGGGGTGATCCGCAAT...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAGGTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: RGFLQSCGRDPGPKERGRIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...CCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATTTCCACTGGGGGTCGTaGGGGTCAACACACTCGATG +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHFHWGS*GSTHSM
Trigger: CATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAA...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGTCTGTCTCATTCCACTaGGGGTCGTGGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGSVSFH*GSWGST
Trigger: TGTTGACCCCCACGACCCCCAGTGGAATGAGACAGA...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGTCTGTCTCATTCCACTaGGGGTCGTGGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLSVSFH*GSWGST
Trigger: TGTTGACCCCCACGACCCCCAGTGGAATGAGACAGA...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTCTGTCTCATTCCACTaGGGGTCGTGGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPSVSFH*GSWGST
Trigger: TGTTGACCCCCACGACCCCCAGTGGAATGAGACAGA...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATACGACCGTAGGGCTCTaGCCAGTTGGGAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNTTVGL*PVGREY
Trigger: GTACTCTCTCCCAACTGGCCAGAGCCCTACGGTCGT...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTACGACCGTAGGGCTCTaGCCAGTTGGGAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLTTVGL*PVGREY
Trigger: GTACTCTCTCCCAACTGGCCAGAGCCCTACGGTCGT...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCVKSLK*LRGPEY
Trigger: GTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCCAAGTTAGGTCCCACTaGCACATGAGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCQVRSH*HMRTLD
Trigger: ATCCAGTGTCCTCATGTGCCAGTGGGACCTAACTTG...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGACAAGTTAGGTCCCACTaGCACATGAGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: TGNLGLDMRRRLCSTSPGQVRSH*HMRTLD
Trigger: ATCCAGTGTCCTCATGTGCCAGTGGGACCTAACTTG...TCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHGALRP*HGLSCS
Trigger: GGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCC...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATCACACGAGAAGTGGATaGTGGCCCCTGCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHHTRSG*WPLLGV
Trigger: TACACCCAGCAGGGGCCACCATCCACTTCTCGTGTG...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGA +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHSPTDG*GVTPMR
Trigger: TCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCT...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGA +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHSPTDG*GVTPMR
Trigger: TCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCT...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHMAAAM*AASRVL
Trigger: CAGCACCCTGGATGCTGCCCACATTGCAGCTGCCAT...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTCCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCACCATCGCCACCAGTaGCAAGAAGATGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLHHRHQ*QEDGSC
Trigger: GCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGATTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCATGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAATGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVACPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGGTGACATCAGCCATGGAGGTAAAGAGCTTGAAGTGGCTACGGGGCCCTGAGGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: MVTSAMEVKSLKWLRGPEGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...CTCAGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCATGGCTGATGTCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGATCCATGCCAAATTCCTaGGTCCTTGGACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGSMPNS*VLGPLL
Trigger: GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTC +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWRRCGR*WHCGSL
Trigger: GAGTGATCCGCAATGCCACCACCGGCCGCATCGTCT...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAAGGCAGCAGGTGCCTTaGCAACATCCAGGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIRQQVP*QHPGCD
Trigger: GTCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCT...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCATTGGACCATAGGGCCTaGGTCCAGGCAGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ENLFPWTIGPGSRQRFPALDHRA*VQAEVS
Trigger: GGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAA...TGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR TCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTCCTTGGACTGGGGCTaGGTGGGTACCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENSLDWG*VGTAAM
Trigger: CATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTCCTCATCATCTCCTaGAGCTGTGGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSLLIIS*SCGGGD
Trigger: ATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAG...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRRALWA*EIPATR
Trigger: CCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCT...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCCGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLRCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTCGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACRCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTCTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGLGCPA*CACPLP
Trigger: TGGAAGAGGACAAGCGCATCATGCTGGACATCCGAG...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTGACCATGGCATGGCTTaGGCTGTTCCAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: PPRWYIQEVEGQQEARSLDHGMA*AVPGDI
Trigger: AATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTC...AAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGGACCATGGCATGGCTTaGGCTGTTCCAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGDHGMA*AVPGDI
Trigger: AATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTC...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHATVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCTTTGGTGTGGAGCATaGGTGCCCAGGGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRLWCGA*VPREAQ
Trigger: TTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGTTGAGACAGGTGAGATaGCTGGCGCCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVLRQVR*LAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAA...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGACTGCCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGTCTCGTTTGAGACAGGTGAGATaGCTGGCGCCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLPPPRWRLHILSSLQSRLRQVR*LAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAA...ACGAGACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCTGGGCACTCACCGATaGAGACGGGCTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNLGTHR*RRAPLN
Trigger: ATTCAAAGGAGCCCGTCTGCATCGGTGAGTGCCCAG...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR GCA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTTTGTCCTCTTCCACATaGACACCCCAGATACAATCC +
Preference number: 4 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACLSSST*TPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAA...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTTGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATCACTCCACTTGGGGCTaGCAGCCTGGCGATCATGGC +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENHSTWG*QPGDHG
Trigger: GCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTG...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACTCCAATGCGAGGGGTaGCCAGGCACACACTTGATG +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYILQCEG*PGTHLM
Trigger: CATCAAGTGTGTGCCTGGGCACCCCTCGCATTGGAG...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCATTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: LPPVPCQIPGSLDLCSSPLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...TGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: GQWKMACPALVWSMSAQGENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGCTCCTCTCCAGAATATaGCCACCCCCTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRLLSRI*PPPPLI
Trigger: GATAAGGGGAGGGGGTGGGCATATTCTGGAGAGGAG...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCGCCGCAAGCAGCGATaGAGACGGGCTCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRRRKQR*RRAPLN
Trigger: ATTCAAAGGAGCCCGTCTGCATCGCTGCTTGCGGCG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCTGGCAACATCCAGGCTaGGACTGTTGTAGAACCCAT +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAWQHPG*DCCRTH
Trigger: ATGGGTTCTACAACAGTCGCAGCCTGGATGTTGCCA...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGCTGTTGTGACAAAGTaGACGCCTCGTTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIAVVTK*TPRSGC
Trigger: GCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGC...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTCAAGCAGCGGGTGGTaGTTGAGCAGCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHSSSGW*LSSFKV
Trigger: CACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGA...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGTACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVYRSHG*SGAGKD
Trigger: GTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTA...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTGGACTGGGGCTGAGTaGGTACCGCAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENWTGAE*VPQPWL
Trigger: CAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGPIPAP*DTTSAT
Trigger: GGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGG...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRQGPGV*TVVMVV
Trigger: CACCACCATCACCACAGTCCAGACACCAGGCCCTTG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCTCAGGGCCGCTTGGTaGGTGGGGCTGCGGATGACT +
Preference number: 4 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLLRAAW*VGLRMT
Trigger: AGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAATCCCAGAAGGGCTaGGTGGCATTGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHESQKG*VALRQV
Trigger: CACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTTTCCACTGGGGGTCGTaGGGGTCAACACACTCGATG +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFFHWGS*GSTHSM
Trigger: CATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAA...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGACGACCGTAGGGCTCTaGCCAGTTGGGAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRTTVGL*PVGREY
Trigger: GTACTCTCTCCCAACTGGCCAGAGCCCTACGGTCGT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSVKSLK*LRGPEY
Trigger: GTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCAAGTTAGGTCCCACTaGCACATGAGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVQVRSH*HMRTLD
Trigger: ATCCAGTGTCCTCATGTGCCAGTGGGACCTAACTTG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGAAGATGGCCAGGAAGTCACCCTCTaGCATGAGGGCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EVYTSYQQHHRHQWQEDGQEVTL*HEGRSS
Trigger: TGAGGACCTGCCCTCATGCCAGAGGGTGACTTCCTG...GCCATCTTCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHTETMA*LELFQE
Trigger: CTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGT...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHTETMA*LELFQE
Trigger: CTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGT...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGGAGGCTCAGGATGCTaGCTGTTGATGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHGGSGC*LLMLVL
Trigger: GAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QEARSLAAGLWCKSELTSGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGTGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCATGTCCTGCTTTGGTGTaGAGCATGAGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPCPALV*SMSAQG
Trigger: TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACA...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: KMACPALVWSMSAQGSPTSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: GGQWKMACPALVWSMSAQSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTCCATGCCAAATTCCTaGGTCCTTGGACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPSMPNS*VLGPLL
Trigger: GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTATTACATGTACAAAGTaGCTTTCAGCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPITCTK*LSASSW
Trigger: CCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAAT...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAAGGCAGCAGGTGCCTTaGCAACATCCAGGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPRQQVP*QHPGCD
Trigger: GTCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCT...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGTCCTTGGACTGGGGCTaGGTGGGTACCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVSLDWG*VGTAAM
Trigger: CATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGA...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATCTCCTCATCATCTCCTaGAGCTGTGGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHLLIIS*SCGGGD
Trigger: ATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAG...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWRALWA*EIPATR
Trigger: CCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCT...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGACTGCCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGTCTCGTAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGG +
Preference number: 4 (lower is better)
Translates to: RLPPPRWRLHILSSLQSRRALWA*EIPATR
Trigger: CCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCT...ACGAGACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR TCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRLGGGW*QSHLHK
Trigger: CTTATGGAGATGTGACTGTCACCAGCCTCCACCCAG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGADGLL*IPEGLG
Trigger: ACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGC...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCAAAGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: EFIPLDHRAWVQAEVSCKAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...TTTGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR TCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGCCTCAAGCAGCCAGTaGCAGGTGAGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELASSSQ*QVRLLL
Trigger: CAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAAGTGTTTGCCAGAGCTaGGCAGGCCCTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPSVCQS*AGPQWA
Trigger: TGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACT...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCTCAAAGAAGTGGATaGCGAAGCCCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWPQRSG*RSPAGS
Trigger: GCTACCAGCAGGGCTTCGTCATCCACTTCTTTGAGG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGGTAGCACTGGTAAGTaGCCACGGTGCCGTGCACTA +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELGSTGK*PRCRAL
Trigger: TAGTGCACGGCACCGTGGTCACTTACCAGTGCTACC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATAGTCACCCTCTGGCATaGGGGCAGGTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENSHPLA*GQVLTP
Trigger: TGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCAGTCACCCTCTGGCATaGGGGCAGGTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGSHPLA*GQVLTP
Trigger: TGGAGTGAGGACCTGCCCTCATGCCAGAGGGTGACT...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTCTCAGGGGCACTGAGACCATGGCATGGCTTGAGCTGTTCCAGGAGACATTTAAAGGGCACAACTTCTTaGGGGCTTGGTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: FSGALRPWHGLSCSRRHLKGTTS*GLGGIS
Trigger: GGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTT...TAAATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR TCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCAGGATGCTGGCTGTTaGTGCTTGTGCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVQDAGC*CLCSSY
Trigger: ATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCCATCTGTCTCCTCGATaGCTGGGGCTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPHLSPR*LGLVLS
Trigger: GGAAAGGACAAGCCCCAGGCATCGAGGAGACAGATG...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCTGGGACACAACCTCTaGAACCCACGGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELLGHNL*NPRPSH
Trigger: ATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCATTGAGACAGGTGAGATaGCTGGCGCCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPLRQVR*LAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAA...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGAAACCTTCTCAAAGTaGAGGTGTAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGETFSK*RCSRWP
Trigger: GGGCCAGCGGCTACACCTGCACTTTGAGAAGGTTTC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AAACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGTTGTCCTCTTCCACATaGACACCCCAGATACAATCC +
Preference number: 4 (lower is better)
Translates to: KLGAGYEASAVLHISRIVLSSST*TPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAA...CACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCTGGTCACAGATATATTaGACGGTGGCCCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGWSQIY*TVAPTG
Trigger: TCCCGTGGGGGCCACCGTGCAATATATCTGTGACCA...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGCACTCCACTTGGGGCTaGCAGCCTGGCGATCATGGC +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVHSTWG*QPGDHG
Trigger: GCCATGATCGCCAGGCTGGCAGCCCCAAGTGGAGTG...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCCTGCTGGGTGTAGCTaGTTCTCAGGACTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELPAGCS*FSGLRA
Trigger: TGCCCGAAGTCCTGAGAAGCAGCTACACCCAGCAGG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGAGCAAGGAGCCTTGCTaGTGGACTGTGGTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRSKEPC*WTVVQV
Trigger: GACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGGAAGCAAGGAGCCTTaGTGCTGGACTGTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVGSKEP*CWTVVQ
Trigger: TTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTCAAGCAGCGGGTGGTaGTTGAGCAGCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRSSSGW*LSSFKV
Trigger: CACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGA...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCTCCTCAAGCAGCGGGTaGTGGTTGAGCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPSSSSG*WLSSFK
Trigger: CTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGA...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCATACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPYRSHG*SGAGKD
Trigger: GTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTA...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGCGGAGGCTGATATTCTaGACCTTGATTTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGRRLIF*TLISTP
Trigger: TGGCGTGGAAATCAAGGTCCAGAATATCAGCCTCCG...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCGGGCTGCGGATGACTTaGCCCCGCAGCAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLGLRMT*PRSRKD
Trigger: GTCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCC...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCACATCTCCATAAGCTaGACGACGGGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECHISIS*TTGKVA
Trigger: TGCCACTTTCCCCGTCGTCCAGCTTATGGAGATGTG...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGCACATCTCCATAAGCTaGACGACGGGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQHISIS*TTGKVA
Trigger: TGCCACTTTCCCCGTCGTCCAGCTTATGGAGATGTG...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQVKSLK*LRGPEY
Trigger: GTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQVKSLK*LRGPEY
Trigger: GTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGGCACCTCAAAGAAGTaGATGACGAAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVGTSKK*MTKPCW
Trigger: CCAGCAGGGCTTCGTCATCCACTTCTTTGAGGTGCC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCAAGTTAGGTCCCACTaGCACATGAGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHQVRSH*HMRTLD
Trigger: ATCCAGTGTCCTCATGTGCCAGTGGGACCTAACTTG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAAGTTAGGTCCCACTaGCACATGAGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLQVRSH*HMRTLD
Trigger: ATCCAGTGTCCTCATGTGCCAGTGGGACCTAACTTG...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVLGLPA*RSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAA...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQTETMA*LELFQE
Trigger: CTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGT...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTACTGAGACCATGGCATaGCTTGAGCTGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAITETMA*LELFQE
Trigger: CTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGT...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTCAGCATCCAGGGTGCTaGAGGCAGCAGGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAQHPGC*RQQVPW
Trigger: CCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTG...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGLAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCTTGCTGCTGGACTGTaGTGCAAGTCTGAGTTGACT +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVALAAGL*CKSELT
Trigger: AGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GRVPLNPLGSPRITASTGMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCTCCATGCCAAATTCCTaGGTCCTTGGACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECSMPNS*VLGPLL
Trigger: GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAINFLRA*WHLLLE
Trigger: CTCCAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535262.1
CDS-3UTR TCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATAGGTGGGGGCTGTTGTaGCAAAGTGGACGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENRWGLL*QSGRLV
Trigger: AACGAGGCGTCCACTTTGTCACAACAGCCCCCACCT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR TCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGGAAGGGGACTTGGGGTaGAGGGTGCAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGEGDLG*RVQVGQ
Trigger: CTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTC...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR TCA 90 bp CTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLPPVPCQIPGSLDLCSSRCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...AGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVARCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCACCTCAAAGAAGTGGATaGCGAAGCCCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPPQRSG*RSPAGS
Trigger: GCTACCAGCAGGGCTTCGTCATCCACTTCTTTGAGG...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGACCATGGCATGGCTTaGGCTGTTCCAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIDHGMA*AVPGDI
Trigger: AATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGACCATGGCATGGCTTaGGCTGTTCCAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRDHGMA*AVPGDI
Trigger: AATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TTCTCAGGGGCACTGAGACCATGGCATGGCTTGAGCTGTTCCAGGAGACATTTAGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: FSGALRPWHGLSCSRRHLAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...TAAATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR TCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTCTGACATGGGCCCAATaGAGGGCCCCAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPLTWAQ*RAPSGQ
Trigger: TTGCCCACTTGGGGCCCTTCATTGGGCCCATGTCAG...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCTTGGTGATGGCGCTGTaGGGAGTACCCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGLVMAL*GVPWCS
Trigger: ACTGCACCAGGGTACTCCTCACAGCGCCATCACCAA...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTAGTTTTGGCCATTGGTaGTGGCGCTGTGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFSFGHW*WRCEEY
Trigger: GTACTCCTCACAGCGCCATCACCAATGGCCAAAACT...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAAGTAGAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGAGACCTCCCAAGAGGCTaGTGTTGGCATGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: RSRSIHLLPTTPSPPVARDLPRG*CWHART
Trigger: AGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTC...TCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTCTACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCACATCTGTCTCCTCGATaGCTGGGGCTTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPHLSPR*LGLVLS
Trigger: GGAAAGGACAAGCCCCAGGCATCGAGGAGACAGATG...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGAAACCTTCTCAAAGTaGAGGTGTAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPETFSK*RCSRWP
Trigger: GGGCCAGCGGCTACACCTGCACTTTGAGAAGGTTTC...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCGGACATGTGTCATTaGGGGGCACCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWPDMCH*GAPQRS
Trigger: ACTTCTTTGAGGTGCCCCGCAATGACACATGTCCGG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGAATCCTGCTGCAGGTTaGCATGCCAGGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVNPAAG*HARAGW
Trigger: CCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAAGGCTGATGTTGGCATaGCAGGACTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPRLMLA*QDYPEV
Trigger: GACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCT...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCACTCCTCTCCAGAATATaGCCACCCCCTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPLLSRI*PPPPLI
Trigger: GATAAGGGGAGGGGGTGGGCATATTCTGGAGAGGAG...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTTGGCAACATCCAGGCTaGGACTGTTGTAGAACCCAT +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVWQHPG*DCCRTH
Trigger: ATGGGTTCTACAACAGTCGCAGCCTGGATGTTGCCA...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGPIPAP*DTTSAT
Trigger: GGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAAGTAGAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGACAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RSRSIHLLPTTPSPPVARQGPGV*TVVMVV
Trigger: CACCACCATCACCACAGTCCAGACACCAGGCCCTTG...TCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTCTACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACGGAGGCTGATATTCTaGACCTTGATTTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPRRLIF*TLISTP
Trigger: TGGCGTGGAAATCAAGGTCCAGAATATCAGCCTCCG...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTGCAGGTGTAGCCGCTaGCCCTCAGGAGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGCRCSR*PSGASS
Trigger: GCTTGAGGCTCCTGAGGGCCAGCGGCTACACCTGCA...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGTAAAGAGCTTGAAGTaGCTACGGGGCCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRVKSLK*LRGPEY
Trigger: GTACTCAGGGCCCCGTAGCCACTTCAAGCTCTTTAC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGGCTCTTCCAGCCATTaGGGATCTCAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVGSSSH*GSQAAP
Trigger: CGGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCC...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAAGATATATTGCACGGTaGCCCCCACGGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIRYIAR*PPRETW
Trigger: CCAAGTTTCCCGTGGGGGCCACCGTGCAATATATCT...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 4 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCAGCCTGGCGATCATaGCAGGTGAGGATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLPAWRS*QVRMEL
Trigger: CAGCTCCATCCTCACCTGCCATGATCGCCAGGCTGG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTTGGGGCTGCCAGCCTaGCGATCATGGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGLGLPA*RSWQVR
Trigger: CCTCACCTGCCATGATCGCCAGGCTGGCAGCCCCAA...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCACGAGAAGTGGATGGTaGCCCCTGCTGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGTRSGW*PLLGVA
Trigger: AGCTACACCCAGCAGGGGCCACCATCCACTTCTCGT...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGA +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGSPTDG*GVTPMR
Trigger: TCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCT...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENMAAAM*AASRVL
Trigger: CAGCACCCTGGATGCTGCCCACATTGCAGCTGCCAT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGGCAGCAGGTGCCTTGGCAACATCCAGGCTGCGACTGTTGTAGAACCCATCTTTTTCCCTGGAGCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: GGSRCLGNIQAATVVEPIFFPGA*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGCTCCAGGGAAAAA...GATGGGTTCTACAACAGTCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCATTTTTCCCTGGAGCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSFFPGA*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGCTCCAGGGAAAAA...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGAAAATAGGCCATGGTaGGCATCGCAGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENENRPW*ASQAGK
Trigger: CTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PPRWYIQEVEGQQEARSLMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...AAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CEEYPGAVPTMVKLILLQVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...CTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGAGAGCCTGACAAGTaGCTGGAATTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPGEPDK*LELEEG
Trigger: TCCCTCCTCCAATTCCAGCCACTTGTCAGGCTCTCC...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCTCCATGCCAAATTCCTaGGTCCTTGGACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGSMPNS*VLGPLL
Trigger: GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTATTACATGTACAAAGTaGCTTTCAGCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVITCTK*LSASSW
Trigger: CCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAAT...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCATTACATGTACAAAGTaGCTTTCAGCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAITCTK*LSASSW
Trigger: CCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAAT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTACCCACAGGGTAGGTaGGTGTGCTGCCTCATAGCG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENYPQGR*VCCLIA
Trigger: CGCTATGAGGCAGCACACCCACCTACCCTGTGGGTA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGGGTGGCATCTCCTCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLGGISS*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGAGGAGATGCCACC...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535262.1
CDS-3UTR CCA 90 bp CTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGAGAATTTATTCCCTTaGACCATAGGGCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LENLFPWTIGPGSRQRFPENLFP*TIGPGS
Trigger: GGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTC...AGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR TCA 90 bp GAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCACGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ENLFPWTIGPGSRQRFPARCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...TGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR TCA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: IGWSVENGVSCFGVEHECRCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTGGTCCCACTGGCACATaGGGACACTGGATCCCACTA +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAGPTGT*GHWIPL
Trigger: TAGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACC...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGACTGTGGTGCAAGTCTaGGTTGACTTCCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRTVVQV*VDFPRL
Trigger: CAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGTCAAGAGGAGAGCCTaGCAAGTGGCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELVKRRA*QVAGIG
Trigger: TCCAATTCCAGCCACTTGTCAGGCTCTCCTCTTGAC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGCTGGGACACAACCTCTaGAACCCACGGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVLGHNL*NPRPSH
Trigger: ATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAG...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGTTGTTGCTGTAGTTaGCCGGGAAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENGCCCS*PGSLER
Trigger: TCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCATTGTCCTCTTCCACATaGACACCCCAGATACAATCC +
Preference number: 4 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPLSSST*TPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAA...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGCCTGGAGAAGTAGAAGTATACACCTCCTACCAACAACACCATCGCCACCAGGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EPGEVEVYTSYQQHHRHQGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...CTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTCTACTTCTCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp GAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGAAGATGGCGAAAATGGCGTGTCCTaGTTTGGTGTGGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: EVYTSYQQHHRHQWQEDGENGVS*FGVEHE
Trigger: CTCATGCTCCACACCAAAGCAGGACACGCCATTTTC...GCCATCTTCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR GCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTCTACCACCTGTTCCATaGCAAATTCCTGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFLPPVP*QIPGSL
Trigger: CAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAG...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGTGGCAACATCCAGGCTaGGACTGTTGTAGAACCCAT +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVWQHPG*DCCRTH
Trigger: ATGGGTTCTACAACAGTCGCAGCCTGGATGTTGCCA...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCACATCTCCATAAGCTaGACGACGGGGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELHISIS*TTGKVA
Trigger: TGCCACTTTCCCCGTCGTCCAGCTTATGGAGATGTG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAGIIHW*GLHVVP
Trigger: GGGGACAACGTGGAGGCCCCACCAGTGTATGATTCC...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 4 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 4 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCGGGGCACTGAGACCATaGCATGGCTTGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLGALRP*HGLSCS
Trigger: GGAACAGCTCAAGCCATGCCATGGTCTCAGTGCCCC...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTCACACGAGAAGTGGATaGTGGCCCCTGCTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAHTRSG*WPLLGV
Trigger: TACACCCAGCAGGGGCCACCATCCACTTCTCGTGTG...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPMAAAM*AASRVL
Trigger: CAGCACCCTGGATGCTGCCCACATTGCAGCTGCCAT...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCTTTTTCCCTGGAGCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: GSPTTCSMPNSWVLGPLLFFPGA*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGCTCCAGGGAAAAA...GAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCATTTTTCCCTGGAGCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPFFPGA*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGCTCCAGGGAAAAA...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGGTATATACAGGAGGTaGAGGGACAGCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIGIYRR*RDSRKQ
Trigger: TTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: FRELETSQEADVGMPGLPNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGACTGCCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGTCTCGTAACTTCTTGAGGGCTTaGTGGCATCTCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: RLPPPRWRLHILSSLQSRNFLRA*WHLLLG
Trigger: ACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTT...ACGAGACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGATGAAGGGCCCCAAGTaGGCAATGACACCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRMKGPK*AMTPRK
Trigger: TTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCAT...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGCCAGGGCGGGATGGTaGTCATGTGGAGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVARAGW*SCGERY
Trigger: GTACCTTTCTCCACATGACCACCATCCCGCCCTGGC...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGCCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGTCTCGTAAGTCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: CPHLDGDFIFSRLSSLVSPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...ACTTACGAGACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTATTACATGTACAAAGTaGCTTTCAGCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPRWYIQEVEGQQEARSLITCTK*LSASSW
Trigger: CCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAAT...AAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTCTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVALGCPA*CACPLP
Trigger: TGGAAGAGGACAAGCGCATCATGCTGGACATCCGAG...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTGGGTCCGACTGGAACTaGATGGTGACATCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAGSDWN*MVTSAM
Trigger: CATGGCTGATGTCACCATTCAGTTCCAGTCGGACCC...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTCCTCAAAGAAGTGGATaGCGAAGCCCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAPQRSG*RSPAGS
Trigger: GCTACCAGCAGGGCTTCGTCATCCACTTCTTTGAGG...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGCCCCAAGTGGGCAATaGCACCAAGAAAATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRTVQNFRELETSQEADVAPSGQ*HQENRP
Trigger: TGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGC...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGTTGTCCTCTTCCACATaGACACCCCAGATACAATCC +
Preference number: 4 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVLSSST*TPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAA...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCTATTCTCTCGTCTCCTaGAAAGGAAAGAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: EYPGAVPTMVKLILLQVAYSLVS*KGKRSS
Trigger: ACTGGATCTCTTTCCTTTGCAGGAGACGAGAGAATA...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317338.17
ENST00000335960.10
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGQGPGV*TVVMVV
Trigger: CACCACCATCACCACAGTCCAGACACCAGGCCCTTG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTTCCACTGGGGGTCGTaGGGGTCAACACACTCGATG +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGFHWGS*GSTHSM
Trigger: CATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAA...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGACGACCGTAGGGCTCTaGCCAGTTGGGAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGTTVGL*PVGREY
Trigger: GTACTCTCTCCCAACTGGCCAGAGCCCTACGGTCGT...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 4 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGGCATCTCCTCCTAGGTaGTATATACAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELASPPR*YIQEVE
Trigger: CTCCACCTCCTGTATATACCACCTAGGAGGAGATGC...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCAAGAAAATAGGCCATaGTGGGCATCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGQENRP*WASQAG
Trigger: CCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCCCTCAGGGTATAGGGTaGTCAGTGGAAAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGPQGIG*SVENGV
Trigger: CACGCCATTTTCCACTGACCACCCTATACCCTGAGG...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATATATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGAASDR*GCCCSC
Trigger: GCAACTACAGCAACAACCTCACCTGTCACTGGCTGC...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TTTGCTTTTCAAAATCTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCGAAACCTTCTCAAAGTaGAGGTGTAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FAFQNLENLFPWTIGPGSETFSK*RCSRWP
Trigger: GGGCCAGCGGCTACACCTGCACTTTGAGAAGGTTTC...GGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAGATTTTGAAAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR GCA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCATTGTCCTCTTCCACATaGACACCCCAGATACAATCC +
Preference number: 4 (lower is better)
Translates to: VQNFRELETSQEADVGMPLSSST*TPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAA...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTCAAGAAGATGGCAGCTaGAATGTGGGCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPQEDGS*NVGSIQ
Trigger: CTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTG...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPLTSLD*PHLDGD
Trigger: GTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAA...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCGGAGAAAGGTACTCCTaGTCTGCTAGTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RTVQNFRELETSQEADVGGERYS*SASVFQ
Trigger: CTGGAACACACTAGCAGAGCAGGAGTACCTTTCTCC...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTGGCAACATCCAGGCTaGGACTGTTGTAGAACCCAT +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENWQHPG*DCCRTH
Trigger: ATGGGTTCTACAACAGTCGCAGCCTGGATGTTGCCA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCCAGTGGCAAGAAGATaGCAGCTGCAATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGPVARR*QLQCGQ
Trigger: CTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTTTTTCCCTGGAGCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: MLACQDYPEVTVERSFGHFFPGA*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGCTCCAGGGAAAAA...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTTTCTTGAGGGCTTGGTaGCATCTCCTCCTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAFLRAW*HLLLGG
Trigger: ACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGTGGTCAGTGGAAAATaGCGTGTCCTGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRTVQNFRELETSQEADVVVSGK*RVLLWC
Trigger: ACACCAAAGCAGGACACGCCATTTTCCACTGACCAC...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGAAGTAGAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGAAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: RSRSIHLLPTTPSPPVARSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...TCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTCTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGATTACATGTACAAAGTaGCTTTCAGCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWITCTK*LSASSW
Trigger: CCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAAT...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGGACCATGGCATGGCTTaGGCTGTTCCAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGDHGMA*AVPGDI
Trigger: AATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTC...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR GCA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGTATTCTCTCGTCTCCTaGAAAGGAAAGAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWYSLVS*KGKRSS
Trigger: ACTGGATCTCTTTCCTTTGCAGGAGACGAGAGAATA...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317338.17
ENST00000335960.10
CDS-3UTR GCA 90 bp TTTGCTTTTCAAAATCTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCCAGGCAGAGGTTTCCTaGAAAGCTGTGGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: FAFQNLENLFPWTIGPGSQAEVS*KAVVGI
Trigger: GATCCCTACCACAGCTTTGCAGGAAACCTCTGCCTG...GGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAGATTTTGAAAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CCA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTCGGAGGCTGATATTCTaGACCTTGATTTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPRRLIF*TLISTP
Trigger: TGGCGTGGAAATCAAGGTCCAGAATATCAGCCTCCG...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGCGGAGGCTGATATTCTaGACCTTGATTTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVRRLIF*TLISTP
Trigger: TGGCGTGGAAATCAAGGTCCAGAATATCAGCCTCCG...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTATAGGAATCATACACTaGTGGGGCCTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAIGIIH*WGLHVV
Trigger: GACAACGTGGAGGCCCCACCAGTGTATGATTCCTAT...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTTTTTCCCTGGAGCCTaGAGAAGTAGAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRFFPGA*RSRSIH
Trigger: GTGTATACTTCTACTTCTCCAGGCTCCAGGGAAAAA...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGGGGATGGTGGTCATGTaGAGAAAGGTACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGGMVVM*RKVLLL
Trigger: GAGCAGGAGTACCTTTCTCCACATGACCACCATCCC...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTTATCCCATAACACAGTaGTCAAGAGGAGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GRTVQNFRELETSQEADVYPITQ*SRGEPD
Trigger: GTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATA...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR TCA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGCGCTGCTGTCAGTACTaGGCTCAACAAAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVRCCQY*AQQRSV
Trigger: AACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCG...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGCGGAGGCTGATATTCTaGACCTTGATTTCCACGCCA +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGRRLIF*TLISTP
Trigger: TGGCGTGGAAATCAAGGTCCAGAATATCAGCCTCCG...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 4 (lower is better)
Translates to: PYPITQWSRGEPDKWLELISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGAGCCTGACAAGTGGCTaGAATTGGAGGAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGSLTSG*NWRRDY
Trigger: ATAGTCCCTCCTCCAATTCCAGCCACTTGTCAGGCT...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CCA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATATCAGCACAAAACCCTaGTCACAGATATATTGCACG +
Preference number: 4 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENISTKP*SQIYCT
Trigger: CGTGCAATATATCTGTGACCAGGGTTTTGTGCTGAT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 90 bp GGGTCCCTCCTTGGACTGGGGCTGAGTGGGTACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGACAGGGCGGCTGTCCTGGTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: GSLLGLGLSGYRSHG*SGAGKDRAAVLVGQ
Trigger: CTGGCCAACCAGGACAGCCGCCCTGTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGAGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
ENST00000585644.1
CDS-3UTR CAA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGGCGCATGGTGCTGGTaGCGGCCGCGCCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACGAWCW*RPRPGL
Trigger: CAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCGGCGCATGGTGCTGGTaGCGGCCGCGCCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGGAWCW*RPRPGL
Trigger: CAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCC...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLARSLH*GLPAWR
Trigger: TCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGC...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGGGCCCTGAGTACTGGCCCAGAACCCGGGCCGTCAGGTCATCCCCATCATAGACGGCCGGTGGTGGCATaGCGGATCACTCCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: GALSTGPEPGPSGHPHHRRPVVA*RITPPQ
Trigger: TTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCG...TCTATGATGGGGATGACCTGACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS GCA 90 bp AGTTGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAGCAGCGATGCAGACGGGCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SCPGSLERRCGRWWH*GSLRRKQRCRRAPL
Trigger: CAAAGGAGCCCGTCTGCATCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 90 bp TGCTGTAGTTGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGCCGCAAGCAGCGATGCAGACGGGCT +
Preference number: 5 (lower is better)
Translates to: CCSCPGSLERRCGRW*HCGSLRRKQRCRRA
Trigger: AGCCCGTCTGCATCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACTACAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGGCGCATGGTGCTGGTaGCGGCCGCGCCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVGAWCW*RPRPGL
Trigger: CAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGGGGCGGCTGTCCTGGTaGGCCAGGCGGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: NPAAGCHARAGWWSCGERGRLSW*ARRGRG
Trigger: TCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCC...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGCGGCTGTCCTGGTaGGCCAGGCGGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGGRLSW*ARRGRG
Trigger: TCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCC...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS GCA 90 bp GATGGTCCCCTGGATCCCGATCCCTGCGCCCTGGGACACAACCTCTaGAACCCACGGCCTTCCCATGTCTCCAGGACCCTCTTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: DGPLDPDPCALGHNL*NPRPSHVSRTLLGW
Trigger: CCAACCCAAGAGGGTCCTGGAGACATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 90 bp GCTGTGGAGGAGGTGATGGTCCCCTGGATCCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACCCACGGCCTTCCCATGTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: AVEEVMVPWIPIPAP*DTTSATHGLPMSPG
Trigger: TCCTGGAGACATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTCCTCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 90 bp TGTTGCTGTAGTTGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTCCGCCGCAAGCAGCGATGCAGACGG +
Preference number: 5 (lower is better)
Translates to: CCCSCPGSLERRCGR*WHCGSLRRKQRCRR
Trigger: CCGTCTGCATCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACTACAGCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGCGCATGGTGCTGGTaGCGGCCGCGCCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKGAWCW*RPRPGL
Trigger: CAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCC...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS CCA 90 bp CAGCCAGTGACAGGTGAGGTTGTTGCTGTAGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGTGGTGGCATTGCGGATCACCCCTGG +
Preference number: 5 (lower is better)
Translates to: QPVTGEVVAVVAREA*RDDAAGGGIADHPW
Trigger: CCAGGGGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACCTCACCTGTCACTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS CCA 90 bp CACACGGCTCGGCAGGCTGGCTCTGTCTCATTCCACTGGGGGTCGTaGGGGTCAACACACTCGATGATGATGGAGCCCTGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: HTARQAGSVSFHWGS*GSTHSMMMEPCSRV
Trigger: CACCCTGGAGCAGGGCTCCATCATCATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAATGAGACAGAGCCAGCCTGCCGAGCCGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 90 bp CAGCCAGTGACAGGTGAGGTTGTTGCTGTAGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGTGGTGGCATTGCGGATCACTCCGCC +
Preference number: 5 (lower is better)
Translates to: QPVTGEVVAVVAREA*RDDAAGGGIADHSA
Trigger: GGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACCTCACCTGTCACTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGGGCGGCTGTCCTGGTaGGCCAGGCGGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: QEARSLAAGLWCKSELTSGRLSW*ARRGRG
Trigger: TCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGGGCGGCTGTCCTGGTaGGCCAGGCGGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHGRLSW*ARRGRG
Trigger: TCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGGGCGGCTGTCCTGGTaGGCCAGGCGGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHGRLSW*ARRGRG
Trigger: TCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CAA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTGCCCAGGCACACACTaGATGCTGGCCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLCPGTH*MLAWPF
Trigger: GAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGCA...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTTGCCCAGGCACACACTaGATGCTGGCCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASCPGTH*MLAWPF
Trigger: GAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGCA...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 90 bp GGTGTAGCCGCTGGCCCTCAGGAGCCTCAAGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGCCCGGGAAGCCTGGAGAGACGATGC +
Preference number: 5 (lower is better)
Translates to: GVAAGPQEPQAASDR*GCCCSCPGSLERRC
Trigger: GCATCGTCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGCTCCTGAGGGCCAGCGGCTACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS GCA 90 bp CCAGTGGCAAGAAGATGGCAGCTGCAATGTGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCTTGGCAACCATCCAGGCTGCGACTG +
Preference number: 5 (lower is better)
Translates to: PVARRWQLQCGQHPG*WRQQVPWQPSRLRL
Trigger: CAGTCGCAGCCTGGATGGTTGCCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS GCA 90 bp GGCCCCAGCAGGCTCACCCTCATAGCGCAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAAGTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: GPSRLTLIAQGHACS*PAAVSTELNKEVFA
Trigger: GGCAAACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGGTGAGCCTGCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS CCA 90 bp GGGTGGTGGTTGAGCAGCTTCAAGGTGGGGGCTGTTGTGACAAAGTaGACGCCTCGTTCTGGCTGCTCAGGTGTGGGGGCTGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GWWLSSFKVGAVVTK*TPRSGCSGVGAAVS
Trigger: GCTGACAGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACCTTGAAGCTGCTCAACCACCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS-3UTR CAA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTGTCTCCAGGACCCTCTaGGGTTGGTGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASVSRTL*GWCPGS
Trigger: AGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGAC...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTARSLH*GLPAWR
Trigger: TCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSARSLH*GLPAWR
Trigger: TCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGC...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGAGGCAGCAGGTGCCTaGGCAACCATCCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGEAAGA*ATIQAA
Trigger: CGCAGCCTGGATGGTTGCCAAGGCACCTGCTGCCTC...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CAA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCGGCCGGTGGTGGCATaGCGGATCACTCCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVRPVVA*RITPPQ
Trigger: TTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 90 bp TTCAAGGTGGGGGCTGTTGTGACAAAGTGGACGCCTCGTTCTGGCTaGTCAGGTGTGGGGGCTGCTGTCAGCTCGCCATCTGTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FKVGAVVTKWTPRSG*SGVGAAVSSPSVSS
Trigger: CGAGGAGACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS GCA 90 bp CCAGTGGCAAGAAGATGGCAGCTGCAATGTGGGCAGCATCCAGGGTaGTGGAGGCAGCAGGTGCCTTGGCAACAGCCCTACAGATGGGTG +
Preference number: 5 (lower is better)
Translates to: PVARRWQLQCGQHPG*WRQQVPWQQPYRWV
Trigger: CACCCATCTGTAGGGCTGTTGCCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442608.7
CDS GCA 90 bp CCACAGGGTAGGTGGGTGTGCTGCCTCATAGCGCAGGGCCATGCCTaGAGCTGCCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAAGTG +
Preference number: 5 (lower is better)
Translates to: PQGRWVCCLIAQGHA*SCPAAVSTELNKEV
Trigger: CACTTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGCAGCACACCCACCTACCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS GCA 90 bp GTGGCCCCCACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCGTGGCAGGAAGTCACTATGGGTAGG +
Preference number: 5 (lower is better)
Translates to: VAPTGNLGLDMRRRL*STSPGSWQEVTMGR
Trigger: CCTACCCATAGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544224.2
CDS CCA 90 bp CAGCTTCAAGGTGGGGGCTGTTGTGACAAAGTGGACGCCTCGTTCTaGCTGCTCAGGTGTGGGGGCTGCTGTCAGCTCGCCATCTGTCTC +
Preference number: 5 (lower is better)
Translates to: QLQGGGCCDKVDASF*LLRCGGCCQLAICL
Trigger: GAGACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACCTTGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS CCA 90 bp GTCTCCTCATCATCTCCTGAAGCTGTGGAGGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCCTGGGACACAACCTCTGCAACCCAC +
Preference number: 5 (lower is better)
Translates to: VSSSSPEAVEEVMVP*IPIPAPWDTTSATH
Trigger: GTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGGGGCTGCGGATGACTaGGCCCCGCAGCAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: GQWKMACPALVWSMSAQGGAADD*APQQER
Trigger: TCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCCC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGGGCTGCGGATGACTaGGCCCCGCAGCAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCGAADD*APQQER
Trigger: TCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCCC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCGGGGCTGCGGATGACTaGGCCCCGCAGCAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAGAADD*APQQER
Trigger: TCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCCC...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: HRRRGRAQLLEGLVASPPGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...AGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWGLFQP*GISGSS
Trigger: GGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCC...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGT +
Preference number: 5 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSAPTGN*GLDMRR
Trigger: ACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGC...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: RLRMLAVDACAPAMFFPQARSLH*GLPAWR
Trigger: TCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGC...CTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNARSLH*GLPAWR
Trigger: TCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGC...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGCCCAGGCACACACTaGATGCTGGCCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRCPGTH*MLAWPF
Trigger: GAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGCA...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTGCCCAGGCACACACTaGATGCTGGCCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: KIGHGGHRRRGRAQLLEGCPGTH*MLAWPF
Trigger: GAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGCA...GCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGAAGTGGCTACGGGGCCCTGAGTACTGGCCCAGAACCCGGGCCGTCAGGTCAGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: LKWLRGPEYWPRTRAVRSEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...TGACCTGACGGCCCGGGTTCTGGGCCAGTACTCAGGGCCCCGTAGCCACTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CAA 90 bp GAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCCGGCCGGTGGTGGCATaGCGGATCACTCCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: EYPGAVPTMVKLILLQVARPVVA*RITPPQ
Trigger: TTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCG...GGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAACGGCCGGTGGTGGCATaGCGGATCACTCCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: LILLQVAMPGRDGGHVEKRPVVA*RITPPQ
Trigger: TTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCG...TTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 90 bp GGGGGAGCTGAGGTCTGTAGGGGAGTCCAGAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGGGCCTGGTGTCTGGACTGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: GGAEVCRGVQRALWA*EIPATRAWCLDCGD
Trigger: ATCACCACAGTCCAGACACCAGGCCCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCTCTGGACTCCCCTACAGACCTCAGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 90 bp ATGGCCCTGCTGGAAGGCCTCATAGCGCAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAAGTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: MALLEGLIAQGHACS*PAAVSTELNKEVFA
Trigger: GGCAAACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGCCTTCCAGCAGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS GCA 90 bp GGTAGGTGGGTGTGCTGCCTCATAGCGCAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAAGTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: GRWVCCLIAQGHACS*PAAVSTELNKEVFA
Trigger: GGCAAACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGCAGCACACCCACCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS CCA 90 bp AACAACACCATCGCCACCAGTGGCAAGAAGATGGCAGCTGCAATGTaGGCAGCATCCAGGGTGCTGGAGGCAGCAGGTGCCTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: NNTIATSGKKMAAAM*AASRVLEAAGALAT
Trigger: GGTTGCCAAGGCACCTGCTGCCTCCAGCACCCTGGATGCTGCCCACATTGCAGCTGCCATCTTCTTGCCACTGGTGGCGATGGTGTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CAA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCTCGATGCCTGGGGCTaGTCCTTTCCCCACGGTTGG +
Preference number: 5 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVLDAWG*SFPHGW
Trigger: CCAACCGTGGGGAAAGGACAAGCCCCAGGCATCGAG...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAAGCAGCGGGTGGTGGTaGAGCAGCTTCAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGSSGWW*SSFKVG
Trigger: CCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCT...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCCAGGACCCTCTTGGGTaGGTGTCCAGGCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KMACPALVWSMSAQGSPTQDPLG*VSRLCW
Trigger: CCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTG...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACAGGACCCTCTTGGGTaGGTGTCCAGGCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GQWKMACPALVWSMSAQGQDPLG*VSRLCW
Trigger: CCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGGGGCTGCGGATGACTaGGCCCCGCAGCAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHGAADD*APQQER
Trigger: TCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCCC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGTGCAGACGGGCTCCTTaGAATCCCAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: NPAAGCHARAGWWSCGERCRRAP*NPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCA...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGGCAGGAAGTCACCTGCAGACGGGCTCCTTaGAATCCCAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: DMRRRLCSTSPGSWQEVTCRRAP*NPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCA...GGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CAA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGAGGTTTCCTGCAAAGCTGTGGTAGGGATCCCGGACCCAAAGAGAGGGGCAGGGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: RGFLQSCGRDPGPKERGRGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...CCTGCCCCTCTCTTTGGGTCCGGGATCCCTACCACAGCTTTGCAGGAAACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CAA 90 bp GGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: GALLPPVPCQIPGSLDLCGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...GCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVAMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GGHRRRGRAQLLEGLVASSGHVS*RGTSKK
Trigger: CTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGA...AGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGACATGGGCCGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CLCSSYVLPTGRCPLTWAGLFQP*GISGSS
Trigger: GGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCC...GGCCCATGTCAGGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAGCCCAACCGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KMACPALVWSMSAQGSPTGLFQP*GISGSS
Trigger: GGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCC...GGTTGGGCTTCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCAPTGN*GLDMRR
Trigger: ACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GRVPLNPLGSPRITASTGAPTGN*GLDMRR
Trigger: ACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGC...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCTGGTCACAGATATATaGCACGGTGGCCCCCACGGG +
Preference number: 5 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWLVTDI*HGGPHG
Trigger: CCCGTGGGGGCCACCGTGCAATATATCTGTGACCAG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGCCCGGTCACTCCACTaGGGGCTGCCAGCCTGGCGA +
Preference number: 5 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGARSLH*GLPAWR
Trigger: TCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTGCACGGCCGGTGGTGGCATaGCGGATCACTCCGCCGCAA +
Preference number: 5 (lower is better)
Translates to: ENLFPWTIGPGSRQRFPARPVVA*RITPPQ
Trigger: TTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCG...TGCAGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CAA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACGAGGCAGCAGGTGCCTaGGCAACATCCAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHEAAGA*ATSRLR
Trigger: TCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCTC...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGAGGCAGCAGGTGCCTaGGCAACATCCAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: GGQWKMACPALVWSMSAQEAAGA*ATSRLR
Trigger: TCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCTC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS TCA 90 bp ATTGCGGATCACCCCTGGGCACTCACCGATGCAGACGGGCTCCTTTaGATCCCAGAAGGGCTGGGTGGCATTGAGACAGGTGAGATGCCT +
Preference number: 5 (lower is better)
Translates to: IADHPWALTDADGLL*IPEGLGGIETGEMP
Trigger: AGGCATCTCACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCATCGGTGAGTGCCCAGGGGTGATCCGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS GCA 90 bp ATAGCAATGGCCCTGCTGGAAGGCCTCATAGCGCAGGGCCATGCCTaGAGCTGCCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAAGTG +
Preference number: 5 (lower is better)
Translates to: IAMALLEGLIAQGHA*SCPAAVSTELNKEV
Trigger: CACTTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGCCTTCCAGCAGGGCCATTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS-3UTR CAA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGGTCCTTTCCCCACGGTaGGGGCCTCTAAAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWVLSPR*GPLKRV
Trigger: GACTCTCTTTAGAGGCCCCAACCGTGGGGAAAGGAC...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTCTCGATGCCTGGGGCTaGTCCTTTCCCCACGGTTGG +
Preference number: 5 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLLDAWG*SFPHGW
Trigger: CCAACCGTGGGGAAAGGACAAGCCCCAGGCATCGAG...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTCAGGACCCTCTTGGGTaGGTGTCCAGGCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLQDPLG*VSRLCW
Trigger: CCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTG...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCAGTCTCCAGGACCCTCTaGGGTTGGTGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPVSRTL*GWCPGS
Trigger: AGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGAC...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGTCTCCAGGACCCTCTaGGGTTGGTGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GGQWKMACPALVWSMSAQVSRTL*GWCPGS
Trigger: AGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGAC...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCAGGGGCTGCGGATGACTaGGCCCCGCAGCAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SMPNSWVLGPLLLSRICPGAADD*APQQER
Trigger: TCTTTCCTGCTGCGGGGCCAAGTCATCCGCAGCCCC...TGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTTGCAGACGGGCTCCTTaGAATCCCAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVCRRAP*NPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCA...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGCGGCCGGTGGTGGCATaGCGGATCACCCCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: PYPITQWSRGEPDKWLELRPVVA*RITPGH
Trigger: GTGCCCAGGGGTGATCCGCAATGCCACCACCGGCCG...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS-3UTR CAA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: GQWKMACPALVWSMSAQGGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACA +
Preference number: 5 (lower is better)
Translates to: GIAGGEGHNFLRAWWHLLSSMMR*SSSTCT
Trigger: TGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGA...GAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHGLFQP*GISGSS
Trigger: GGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGT +
Preference number: 5 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLAPTGN*GLDMRR
Trigger: ACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGC...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGACTGGTCACAGATATATaGCACGGTGGCCCCCACGGG +
Preference number: 5 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGLVTDI*HGGPHG
Trigger: CCCGTGGGGGCCACCGTGCAATATATCTGTGACCAG...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCTGGTCACAGATATATaGCACGGTGGCCCCCACGGG +
Preference number: 5 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVLVTDI*HGGPHG
Trigger: CCCGTGGGGGCCACCGTGCAATATATCTGTGACCAG...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACCTGGTCACAGATATATaGCACGGTGGCCCCCACGGG +
Preference number: 5 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHLVTDI*HGGPHG
Trigger: CCCGTGGGGGCCACCGTGCAATATATCTGTGACCAG...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCAAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: HGGHRRRGRAQLLEGLVARPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...TGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATCTCGATGCCTGGGGCTaGTCCTTTCCCCACGGTTGG +
Preference number: 5 (lower is better)
Translates to: QGIGWSVENGVSCFGVEHLDAWG*SFPHGW
Trigger: CCAACCGTGGGGAAAGGACAAGCCCCAGGCATCGAG...ATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTAGCAGCGGGTGGTGGTaGAGCAGCTTCAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGSSGWW*SSFKVG
Trigger: CCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCT...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGTCTCCAGGACCCTCTaGGGTTGGTGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: QEARSLAAGLWCKSELTSVSRTL*GWCPGS
Trigger: AGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGAC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAKGWVA*RQVRCL
Trigger: CAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: GRVPLNPLGSPRITASTGKGWVA*RQVRCL
Trigger: CAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTT...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTTGCAGACGGGCTCCTTaGAATCCCAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPRWYIQEVEGQQEARSLCRRAP*NPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCA...AAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCTGCAGACGGGCTCCTTaGAATCCCAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: QEARSLAAGLWCKSELTSCRRAP*NPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCA...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGGTGGGGCCTCCACGTaGTCCCCATTGCGAATGATG +
Preference number: 5 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHGGAST*SPLRMM
Trigger: CATCATTCGCAATGGGGACAACGTGGAGGCCCCACC...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWSGHVS*RGTSKK
Trigger: CTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGA...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IGWSVENGVSCFGVEHECGLFQP*GISGSS
Trigger: GGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCC...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTGGGCTCTTCCAGCCATaGGGGATCTCAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLGLFQP*GISGSS
Trigger: GGAGCTGCCTGAGATCCCCAATGGCTGGAAGAGCCC...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCTGGTCACAGATATATaGCACGGTGGCCCCCACGGG +
Preference number: 5 (lower is better)
Translates to: PQGIGWSVENGVSCFGVELVTDI*HGGPHG
Trigger: CCCGTGGGGGCCACCGTGCAATATATCTGTGACCAG...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATTGCCCAGGCACACACTaGATGCTGGCCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNCPGTH*MLAWPF
Trigger: GAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGCA...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHARKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: GGQWKMACPALVWSMSAQRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TCCAGGCTGGTCCAGGGCATGAGGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: SRLVQGMRRLRMLAVDACEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...ACAAGCATCAACAGCCAGCATCCTGAGCCTCCTCATGCCCTGGACCAGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTACCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: GQWKMACPALVWSMSAQGMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: GGQWKMACPALVWSMSAQMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...CTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGAGGCAGCAGGTGCCTaGGCAACATCCAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIEAAGA*ATSRLR
Trigger: TCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCTC...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGGAGGCAGCAGGTGCCTaGGCAACAGCCCTACAGATG +
Preference number: 5 (lower is better)
Translates to: LRGVLAIGDGAVRSTLVQEAAGA*ATALQM
Trigger: CATCTGTAGGGCTGTTGCCAAGGCACCTGCTGCCTC...CTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442608.7
CDS-3UTR CAA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCTCGATGCCTGGGGCTaGTCCTTTCCCCACGGTTGG +
Preference number: 5 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWLDAWG*SFPHGW
Trigger: CCAACCGTGGGGAAAGGACAAGCCCCAGGCATCGAG...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTCAGGACCCTCTTGGGTaGGTGTCCAGGCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFQDPLG*VSRLCW
Trigger: CCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTG...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGACCCTCTTGGGTaGGTGTCCAGGCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIQDPLG*VSRLCW
Trigger: CCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTG...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGGCATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTGCTCAGGAGATAGGCTaGGTAATGGAAATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: GHRRRGRAQLLEGLVASPAQEIG*VMEMEG
Trigger: ACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGC...AGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSKGWVA*RQVRCL
Trigger: CAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTT...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHKGWVA*RQVRCL
Trigger: CAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTT...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATCGCAGGCGGGGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTATCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: IAGGEGHNFLRAWWHLLLSTLSP*RMMSLS
Trigger: TGACAGGCTCATCATTCGCAATGGGGACAACGTGGA...TAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCCCCGCCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: HHGQVNPAAGCHARAGWWSTLSP*RMMSLS
Trigger: TGACAGGCTCATCATTCGCAATGGGGACAACGTGGA...CCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCTGGGGCTCTCCTACCACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGALLPPVPCQIPGSLDLSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...GAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACA +
Preference number: 5 (lower is better)
Translates to: ETSQEADVGMPGLPRGHRSSMMR*SSSTCT
Trigger: TGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGA...ACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGAATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SSHHGQVNPAAGCHARAGMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...TCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVSGHVS*RGTSKK
Trigger: CTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGA...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAAGGGCACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATAGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GRAQLLEGLVASPPRWYIAPTGN*GLDMRR
Trigger: ACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGC...TATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAGAAAGGAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: NPAAGCHARAGWWSCGERRPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...CCTTTCTCCACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: LAIGDGAVRSTLVQFPPWRPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...CCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGTGCCCAGGCACACACTaGATGCTGGCCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVCPGTH*MLAWPF
Trigger: GAAGGGCCAGGCCAGCATCAAGTGTGTGCCTGGGCA...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GVLAIGDGAVRSTLVQFPQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...TGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGCCAAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: RPPKRLMLACQDYPEVTVEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...AACGGTGACCTCTGGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: PWCSSHHGQVNPAAGCHAPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...GGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GCCATTGGTGATGGCGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: AIGDGAVRSTLVQFPPWSTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...TGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCGCCATCACCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: PTMVKLILLQVAMPGRDGTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...ACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCATGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGCAGCAGGTGCCTaGGCAACATCCAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVEAAGA*ATSRLR
Trigger: TCGCAGCCTGGATGTTGCCAAGGCACCTGCTGCCTC...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS TCA 90 bp TCCACATCTCCAGGATCGTGGCAGGAAGTCACTATGGGTAGGGGGTaGTGGGGAGAAGTAGCCCAAGGAGAACTAAGCAGAGGCCAATCC +
Preference number: 5 (lower is better)
Translates to: STSPGSWQEVTMGRG*WGEVAQGELSRGQS
Trigger: GGATTGGCCTCTGCTTAGTTCTCCTTGGGCTACTTCTCCCCATCACCCCCTACCCATAGTGACTTCCTGCCACGATCCTGGAGATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544224.2
CDS CCA 90 bp CAGGCCCTCAATGGGCAGGTATTCCACCTCATAGGAATCATACACTaGTGGGGCCTCCACGTTGTCCCCATTGCGAATGATGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QALNGQVFHLIGIIH*WGLHVVPIANDEPV
Trigger: GACAGGCTCATCATTCGCAATGGGGACAACGTGGAGGCCCCACCAGTGTATGATTCCTATGAGGTGGAATACCTGCCCATTGAGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TGCCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCTCCAGTCTCGTAAGTCAGGACCCTCTTGGGTaGGTGTCCAGGCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CPHLDGDFIFSRLSSLVSQDPLG*VSRLCW
Trigger: CCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTG...ACTTACGAGACTGGAGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CAA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGGTCTCCAGGACCCTCTaGGGTTGGTGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRVSRTL*GWCPGS
Trigger: AGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGAC...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCTGCAGACGGGCTCCTTaGAATCCCAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FRELETSQEADVGMPGLPCRRAP*NPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCA...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AAACTTGGGGCTGGATATGAGGCGTCGGCTGTGCTCCACATCTCCAGGATCGTGTCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: KLGAGYEASAVLHISRIVSTLSP*RMMSLS
Trigger: TGACAGGCTCATCATTCGCAATGGGGACAACGTGGA...CACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CAA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRVPLNPLGSPRITASTGSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSSGHVS*RGTSKK
Trigger: CTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGA...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: PQGIGWSVENGVSCFGVEWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...CTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACAGGTAGATGCCCCCTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: LAVDACAPAMFFPQVDAPWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...GGGGGCATCTACCTGTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATATGCCCACCCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: HAKFLGPWTSAPLQNMPTPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...GGTGGGCATATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTAGGGTCCCCCTGAACCCCTTAGGATCTCCTAGAATTACTGCCTCCACTGGGACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: GRVPLNPLGSPRITASTGTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...CCCAGTGGAGGCAGTAATTCTAGGAGATCCTAAGGGGTTCAGGGGGACCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GACTTGGAAGGAGTGACAGCATGGAGGCAGAGAGGGGTAGGGTGTGGGAGAAAGGGAGAATTTATTCCCTaGGACCATAGGGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: DLEGVTAWRQRGVGCGRKGEFIP*DHRAWV
Trigger: GACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCC...CTTTCTCCCACACCCTACCCCTCTCTGCCTCCATGCTGTCACTCCTTCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS CCA 90 bp GCCCTCAATGGGCAGGTATTCCACCTCATAGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCCATTGCGAATGATGAGCCTGTCATC +
Preference number: 5 (lower is better)
Translates to: ALNGQVFHLIGIIHW*GLHVVPIANDEPVI
Trigger: GATGACAGGCTCATCATTCGCAATGGGGACAACGTGGAGGCCCCACCAGTGTATGATTCCTATGAGGTGGAATACCTGCCCATTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCAGCAGCGGGTGGTGGTaGAGCAGCTTCAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RTVQNFRELETSQEADVGSSGWW*SSFKVG
Trigger: CCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCT...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGKGWVA*RQVRCL
Trigger: CAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTT...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ACCAAGAAAATAGGCCATGGTGGGCATCGCAGGCGGGGAAGGGCACAACTTCTTTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACA +
Preference number: 5 (lower is better)
Translates to: TKKIGHGGHRRRGRAQLLSSMMR*SSSTCT
Trigger: TGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGA...AAGAAGTTGTGCCCTTCCCCGCCTGCGATGCCCACCATGGCCTATTTTCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACA +
Preference number: 5 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLSSMMR*SSSTCT
Trigger: TGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGA...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCCAATGAAGGGCCCCAAGTGGGCAATGACACCAAGAAAATAGGCCATGGTGGGTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACA +
Preference number: 5 (lower is better)
Translates to: PNEGPQVGNDTKKIGHGGSSMMR*SSSTCT
Trigger: TGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGA...CCCACCATGGCCTATTTTCTTGGTGTCATTGCCCACTTGGGGCCCTTCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CACCTGTTCCATGCCAAATTCCTGGGTCCTTGGACCTCTGCTCCTCTCCAGAATTCCGGACATGTGTCATaGCGGGGCACCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: HLFHAKFLGPWTSAPLQNSGHVS*RGTSKK
Trigger: CTTCTTTGAGGTGCCCCGCAATGACACATGTCCGGA...ATTCTGGAGAGGAGCAGAGGTCCAAGGACCCAGGAATTTGGCATGGAACAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: HRRKVSLSSGYRVVSGKWRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...CCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CACAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: HNFLRAWWHLLLGGIYRRRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...CCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: VSLSSGYRVVSGKWRVLLQLLEG*VASPPG
Trigger: TCCAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...AAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535262.1
CDS-3UTR CAA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGAGCAGCGGGTGGTGGTaGAGCAGCTTCAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVSSGWW*SSFKVG
Trigger: CCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCT...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS-3UTR CAA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTGCCCCCACGCTCAGGAGATAGGCTaGGTAATGGAAATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: LAAGLWCKSELTSLDCPHAQEIG*VMEMEG
Trigger: ACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGC...GTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCTCAGGAGATAGGCTaGGTAATGGAAATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: GQVNPAAGCHARAGWWSCAQEIG*VMEMEG
Trigger: ACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGC...ACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCAGGCAGAGGTTTCCTTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LENLFPWTIGPGSRQRFPSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...AGGAAACCTCTGCCTGGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CAA 90 bp CCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PFPQGIGWSVENGVSCFGSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...ACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACA +
Preference number: 5 (lower is better)
Translates to: MLACQDYPEVTVERSFGHSSMMR*SSSTCT
Trigger: TGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGA...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCCTGCCCCCACGGGAAACTaGGGGCTGGATATGAGGCGT +
Preference number: 5 (lower is better)
Translates to: YNTLHVQSGFQPAPGRLPAPTGN*GLDMRR
Trigger: ACGCCTCATATCCAGCCCCAAGTTTCCCGTGGGGGC...AGGGAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCCTGGTCACAGATATATaGCACGGTGGCCCCCACGGG +
Preference number: 5 (lower is better)
Translates to: RTVQNFRELETSQEADVGLVTDI*HGGPHG
Trigger: CCCGTGGGGGCCACCGTGCAATATATCTGTGACCAG...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: MLACQDYPEVTVERSFGHRPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...ATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TGTTGGCATGCCAGGACTACCCAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: CWHARTTQRSPLRGVLAIRPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGTAGTCCTGGCATGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTAGACCATGGCATGGCTaGAGCTGTTCCAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: EEYPGAVPTMVKLILLQVRPWHG*SCSRRH
Trigger: ATGTCTCCTGGAACAGCTCAAGCCATGCCATGGTCT...AACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCAGGACTACCCTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: FRELETSQEADVGMPGLPWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...GGGTAGTCCTGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAACTTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: QLLEGLVASPPRWYIQEVQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...CACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGAAGGGCACAACTTCTaGAGGGCTTGGTGGCATCTC +
Preference number: 5 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGEGHNF*RAWWHL
Trigger: GAGATGCCACCAAGCCCTCAAGAAGTTGTGCCCTTC...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGACTCCAGTCTCGTAAGTaGGATTGTCAAACGCTGACT +
Preference number: 5 (lower is better)
Translates to: GQWKMACPALVWSMSAQGLQSRK*DCQTLT
Trigger: AGTCAGCGTTTGACAATCCAACTTACGAGACTGGAG...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATGTGCTCCAGTCTCGTAAGTaGGATTGTCAAACGCTGACT +
Preference number: 5 (lower is better)
Translates to: VKLILLQVAMPGRDGGHVLQSRK*DCQTLT
Trigger: AGTCAGCGTTTGACAATCCAACTTACGAGACTGGAG...CACATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 90 bp CTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCCTAGACTaGCCCCACCTAGATGGAGACTTCATATTCTCTCGTCTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LAAGLWCKSELTSLD*PHLDGDFIFSRLLQ
Trigger: TTGCAGGAGACGAGAGAATATGAAGTCTCCATCTAGGTGGGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317338.17
ENST00000335960.10
CDS-3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCGCTCAGGAGATAGGCTaGGTAATGGAAATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: QEARSLAAGLWCKSELTSAQEIG*VMEMEG
Trigger: ACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGC...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CCTCCTAGGTGGTATATACAGGAGGTGGAGGGACAGCAGGAAGCAAGGAGCCTTGCTCAGGAGATAGGCTaGGTAATGGAAATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: PPRWYIQEVEGQQEARSLAQEIG*VMEMEG
Trigger: ACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGC...AAGGCTCCTTGCTTCCTGCTGTCCCTCCACCTCCTGTATATACCACCTAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGGCTCAGGATGCTGGCTGTTGATGCTTGTGCTCCAGCTATGTTCTTCCCACGCTCAGGAGATAGGCTaGGTAATGGAAATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: GGSGCWLLMLVLQLCSSHAQEIG*VMEMEG
Trigger: ACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGC...GTGGGAAGAACATAGCTGGAGCACAAGCATCAACAGCCAGCATCCTGAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: RTVQNFRELETSQEADVGKGWVA*RQVRCL
Trigger: CAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTT...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCTCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: IGGKSPFPQGIGWSVENGSTLSP*RMMSLS
Trigger: TGACAGGCTCATCATTCGCAATGGGGACAACGTGGA...GCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTTCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: SPFPQGIGWSVENGVSCFSTLSP*RMMSLS
Trigger: TGACAGGCTCATCATTCGCAATGGGGACAACGTGGA...AAAGCAGGACACGCCATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GAAGTATACACCTCCTACCAACAACACCATCGCCACCAGTGGCAAGAAGATGGCTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: EVYTSYQQHHRHQWQEDGSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...GCCATCTTCTTGCCACTGGTGGCGATGGTGTTGTTGGTAGGAGGTGTATACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS-3UTR CAA 90 bp CCTTATCCCATAACACAGTGGTCAAGAGGAGAGCCTGACAAGTGGCTGGAATTGATGGAGGTAAAGAGCTaGAAGTGGCTACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PYPITQWSRGEPDKWLELMEVKS*KWLRGP
Trigger: AGGGCCCCGTAGCCACTTCAAGCTCTTTACCTCCAT...CAATTCCAGCCACTTGTCAGGCTCTCCTCTTGACCACTGTGTTATGGGATAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATAGGAAGCAAGGAGCCTaGCTGCTGGACTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENRKQGA*LLDCGA
Trigger: TGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCT...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: RTVQNFRELETSQEADVGMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...GCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATGGTCAAGTTAATCCTGCTGCAGGTTGCCATGCCAGGGCGGGATGGTGGTCATCTCCAGTCTCGTAAGTaGGATTGTCAAACGCTGACT +
Preference number: 5 (lower is better)
Translates to: MVKLILLQVAMPGRDGGHLQSRK*DCQTLT
Trigger: AGTCAGCGTTTGACAATCCAACTTACGAGACTGGAG...ATGACCACCATCCCGCCCTGGCATGGCAACCTGCAGCAGGATTAACTTGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGAGGTCACCGTTGAGAGGAGTTTTGGCCATTGGTGATGGCGCTGTGAGGAGTATCCAGTCTCGTAAGTaGGATTGTCAAACGCTGACT +
Preference number: 5 (lower is better)
Translates to: QRSPLRGVLAIGDGAVRSIQSRK*DCQTLT
Trigger: AGTCAGCGTTTGACAATCCAACTTACGAGACTGGAT...ACTCCTCACAGCGCCATCACCAATGGCCAAAACTCCTCTCAACGGTGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317338.17
ENST00000335960.10
CDS-3UTR CAA 90 bp AACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGGTCAGTGGAAAATTGGTGCAAGTCTGAGTaGACTTCCCTAGACTGCCCC +
Preference number: 5 (lower is better)
Translates to: NIGGKSPFPQGIGWSVENWCKSE*TSLDCP
Trigger: GGGGCAGTCTAGGGAAGTCAACTCAGACTTGCACCA...ATTTTCCACTGACCACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: GRTVQNFRELETSQEADVPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCCCAGGGAAACAGAAATAAAAGATaGTTCTCTGGCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GQWKMACPALVWSMSAQGNRNKR*FSGWSP
Trigger: TGGGCTCCAGCCAGAGAACAATCTTTTATTTCTGTT...TCCCTGGGCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGCAGAACTGTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRTVQNFRELETSQEADVSTKKC*PELSRP
Trigger: GGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGA...AACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGACAGTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTCTTGAGGGCTTGGTGGCATCTCCTCCTAGGTGGTATATACAGGAGGTGGAGGATCCAGTCTCGTAAGTaGGATTGTCAAACGCTGACT +
Preference number: 5 (lower is better)
Translates to: FLRAWWHLLLGGIYRRWRIQSRK*DCQTLT
Trigger: AGTCAGCGTTTGACAATCCAACTTACGAGACTGGAT...CCTCCACCTCCTGTATATACCACCTAGGAGGAGATGCCACCAAGCCCTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317338.17
ENST00000335960.10
CDS-3UTR CAA 90 bp CCATATAATACATTACATGTACAAAGTGGCTTTCAGCCAGCTCCTGGGCGTCTCCAACTTCTTGAGGGCTaGGTGGCATCTCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: PYNTLHVQSGFQPAPGRLQLLEG*VASPPR
Trigger: CCTAGGAGGAGATGCCACCAAGCCCTCAAGAAGTTG...GAGACGCCCAGGAGCTGGCTGAAAGCCACTTTGTACATGTAATGTATTATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTTCTCTGGCTGGAGCCCAGACCCCATATAATACATTACATGTACAAAGTGGCTCCGTTGAGAGGAGTTTaGGCCATTGGTGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: VLWLEPRPHIIHYMYKVAPLRGV*AIGDGA
Trigger: AGCGCCATCACCAATGGCCAAAACTCCTCTCAACGG...AGCCACTTTGTACATGTAATGTATTATATGGGGTCTGGGCTCCAGCCAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGATGGCGTGTCCTGCTTaGGTGTGGAGCATGAGTGCC +
Preference number: 5 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGMACPA*VWSMSA
Trigger: GGCACTCATGCTCCACACCAAAGCAGGACACGCCAT...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CGCTGTGAGGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGAACAGAAATAAAAGATaGTTCTCTGGCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RCEEYPGAVPTMVKLILLNRNKR*FSGWSP
Trigger: TGGGCTCCAGCCAGAGAACAATCTTTTATTTCTGTT...CAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCCTCACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GGAGTACCCTGGTGCAGTTCCCACCATGGTCAAGTTAATCCTGCTGCAGGTTGCAACAGAAATAAAAGATaGTTCTCTGGCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GVPWCSSHHGQVNPAAGCNRNKR*FSGWSP
Trigger: TGGGCTCCAGCCAGAGAACAATCTTTTATTTCTGTT...GCAACCTGCAGCAGGATTAACTTGACCATGGTGGGAACTGCACCAGGGTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAGGAAGCAAGGAGCCTTGCTGCTGGACTGTGGTGCAAGTCTGAGTTGACTTCCAACAGAAATAAAAGATaGTTCTCTGGCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: QEARSLAAGLWCKSELTSNRNKR*FSGWSP
Trigger: TGGGCTCCAGCCAGAGAACAATCTTTTATTTCTGTT...GGAAGTCAACTCAGACTTGCACCACAGTCCAGCAGCAAGGCTCCTTGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp CAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGTATAGGGTGACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: QQLNKHRRKVSLSSGYRVTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...CACCCTATACCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp ATAGGGTGGTCAGTGGAAAATGGCGTGTCCTGCTTTGGTGTGGAGCATGAGTGCAACAGAAATAAAAGATaGTTCTCTGGCTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: IGWSVENGVSCFGVEHECNRNKR*FSGWSP
Trigger: TGGGCTCCAGCCAGAGAACAATCTTTTATTTCTGTT...GCACTCATGCTCCACACCAAAGCAGGACACGCCATTTTCCACTGACCACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp GTCCAGAACTTTAGAGAACTAGAGACCTCCCAAGAGGCTGATGTTGGCATGCCACTCCAGTCTCGTAAGTaGGATTGTCAAACGCTGACT +
Preference number: 5 (lower is better)
Translates to: VQNFRELETSQEADVGMPLQSRK*DCQTLT
Trigger: AGTCAGCGTTTGACAATCCAACTTACGAGACTGGAG...TGGCATGCCAACATCAGCCTCTTGGGAGGTCTCTAGTTCTCTAAAGTTCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS-3UTR CAA 90 bp TTTGCTTTTCAAAATCTGGAGAATTTATTCCCTTGGACCATAGGGCCTGGGTCCTCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: FAFQNLENLFPWTIGPGSSTLSP*RMMSLS
Trigger: TGACAGGCTCATCATTCGCAATGGGGACAACGTGGA...GGACCCAGGCCCTATGGTCCAAGGGAATAAATTCTCCAGATTTTGAAAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS-3UTR CAA 90 bp AGATGTTTGCAACAGCTAAATAAACATCGGAGGAAAGTCTCCCTTTCCTCAGGGACCCAGAGGTCACCGTaGAGAGGAGTTTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: RCLQQLNKHRRKVSLSSGTQRSP*RGVLAI
Trigger: AATGGCCAAAACTCCTCTCAACGGTGACCTCTGGGT...CCCTGAGGAAAGGGAGACTTTCCTCCGATGTTTATTTAGCTGTTGCAAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000535262.1
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp CAGGAGCAGCAGGGCTACCGGGCGCATGGTGCTGGTTaGGGCCGCGCCCTGGGCTGGGACCGCGGCGGGAGG +
Preference number: 6 (lower is better)
Translates to: QEQQGYRAHGAG*GRALGWDRGGR
Trigger: CCTCCCGCCGCGGTCCCAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCCTGCTGCTCCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
CDS GCA 72 bp GCGAGGGCAGGAGCAGCAGGGCTACCGGGCGCATGGTaGTGGTTGCGGCCGCGCCCTGGGCTGGGACCGCGG +
Preference number: 6 (lower is better)
Translates to: ARAGAAGLPGAW*WLRPRPGLGPR
Trigger: CCGCGGTCCCAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCCTGCTGCTCCTGCCCTCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS CCA 72 bp AGGGCAGGAGCAGCAGGGCTACCGGGCGCATGGTGCTaGTTGCGGCCGCGCCCTGGGCTGGGACCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RAGAAGLPGAWC*LRPRPGLGPRR
Trigger: CCGCCGCGGTCCCAGCCCAGGGCGCGGCCGCAACCAGCACCATGCGCCCGGTAGCCCTGCTGCTCCTGCCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
CDS CCA 72 bp GCCGGTGGCGGGAGGCTCTGGAACCTCAGGGCCGCTTaGTGGGTGGGGCTGCGGATGACTTGGCCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: AGGGRLWNLRAA*WVGLRMTWPRS
Trigger: GCTGCGGGGCCAAGTCATCCGCAGCCCCACCCACCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp GACTCCGGACTCCAGGGTCCCTCCTTGGACTGGGGCTaGGTGGGTACCGCAGCCATGGCTGGAGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: DSGLQGPSLDWG*VGTAAMAGVGL
Trigger: CAGCCCCACTCCAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGAGGGACCCTGGAGTCCGGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
ENST00000585644.1
CDS CCA 72 bp TGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTGGTaGCATTGCGGATCACCCCTGGGCACTCACCGATGC +
Preference number: 6 (lower is better)
Translates to: CPGSLERRCGRW*HCGSPLGTHRC
Trigger: GCATCGGTGAGTGCCCAGGGGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS CCA 72 bp TGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTGGTaGCATTGCGGATCACTCCGCCGCAAGCAGCGATGC +
Preference number: 6 (lower is better)
Translates to: CPGSLERRCGRW*HCGSLRRKQRC
Trigger: GCATCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp GGAAGCCTGGAGAGACGATGCGGCCGGTGGTGGCATTaGGGATCACTCCGCCGCAAGCAGCGATGCAGACGG +
Preference number: 6 (lower is better)
Translates to: GSLERRCGRWWH*GSLRRKQRCRR
Trigger: CCGTCTGCATCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp AGTTGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTaGTGGCATTGCGGATCACCCCTGGGCACTCACCGA +
Preference number: 6 (lower is better)
Translates to: SCPGSLERRCGR*WHCGSPLGTHR
Trigger: TCGGTGAGTGCCCAGGGGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS CCA 72 bp AGTTGCCCGGGAAGCCTGGAGAGACGATGCGGCCGGTaGTGGCATTGCGGATCACTCCGCCGCAAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: SCPGSLERRCGR*WHCGSLRRKQR
Trigger: TCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp GGCAGCAGGTGCCTTGGCAACAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGAGGGGTGCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: GSRCLGNSPTDG*GVTPMRGVPRH
Trigger: GTGCCTGGGCACCCCTCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCTGTTGCCAAGGCACCTGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442608.7
CDS CAA 72 bp GGGAAGCCTGGAGAGACGATGCGGCCGGTGGTGGCATaGCGGATCACTCCGCCGCAAGCAGCGATGCAGACG +
Preference number: 6 (lower is better)
Translates to: GKPGETMRPVVA*RITPPQAAMQT
Trigger: CGTCTGCATCGCTGCTTGCGGCGGAGTGATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp CTGGATCCCGATCCCTGCGCCCTGGGACACAACCTCTaGAACCCACGGCCTTCCCATGTCTCCAGGACCCTC +
Preference number: 6 (lower is better)
Translates to: LDPDPCALGHNL*NPRPSHVSRTL
Trigger: GAGGGTCCTGGAGACATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp TGTGGAGGAGGTGATGGTCCCCTGGATCCCGATCCCTaGGCCCTGGGACACAACCTCTGCAACCCACGGCCT +
Preference number: 6 (lower is better)
Translates to: CGGGDGPLDPDP*ALGHNLCNPRP
Trigger: AGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTCCTCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp CCCAGCAGGCTCACCCTCATAGCGCAGGGCCATGCCTaGAGCTGCCCCGCTGCTGTCAGTACTGAGCTCAAC +
Preference number: 6 (lower is better)
Translates to: PSRLTLIAQGHA*SCPAAVSTELN
Trigger: GTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGGTGAGCCTGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS CCA 72 bp GGTGGGGGCTGTTGTGACAAAGTGGACGCCTCGTTCTaGCTGCTCAGGTGTGGGGGCTGCTGTCAGCTCGCC +
Preference number: 6 (lower is better)
Translates to: GGGCCDKVDASF*LLRCGGCCQLA
Trigger: GGCGAGCTGACAGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS CCA 72 bp CTTGGACTGGGGCTGAGTGGGTACCGCAGCCATGGCTaGAGTGGGGCTGGTAAAGACAGGGCGGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LGLGLSGYRSHG*SGAGKDRAAVL
Trigger: CAGGACAGCCGCCCTGTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
ENST00000585644.1
CDS CCA 72 bp GAGGTGATGGTCCCCTGGATCCCGATCCCTGCGCCCTaGGACACAACCTCTGCAACCCACGGCCTTCCCATG +
Preference number: 6 (lower is better)
Translates to: EVMVPWIPIPAP*DTTSATHGLPM
Trigger: CATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp TTGGTAATGGAAATGGAAGGTGCCAGGGCCAGCCGGTaGCGGGAGGCTCTGGAACCTCAGGGCCGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LVMEMEGARASR*REALEPQGRLV
Trigger: CACCAAGCGGCCCTGAGGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATTACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp GCTGGCCCTCAGGAGCCTCAAGCAGCCAGTGACAGGTaGGGTTGTTGCTGTAGTTGCCCGGGAAGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AGPQEPQAASDR*GCCCSCPGSLE
Trigger: CTCCAGGCTTCCCGGGCAACTACAGCAACAACCTCACCTGTCACTGGCTGCTTGAGGCTCCTGAGGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp TGGTGGCATTGCGGATCACCCCTGGGCACTCACCGATaGAGACGGGCTCCTTTGAATCCCAGAAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: WWHCGSPLGTHR*RRAPLNPRRAG
Trigger: CCCAGCCCTTCTGGGATTCAAAGGAGCCCGTCTGCATCGGTGAGTGCCCAGGGGTGATCCGCAATGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS CCA 72 bp CGGCAGGCTGGCTCTGTCTCATTCCACTGGGGGTCGTaGGGGTCAACACACTCGATGATGATGGAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RQAGSVSFHWGS*GSTHSMMMEPC
Trigger: GCAGGGCTCCATCATCATCGAGTGTGTTGACCCCCACGACCCCCAGTGGAATGAGACAGAGCCAGCCTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp TGTAGAACCATCCAGAGAGGCAGCCCTACAGATGGGTaGGGGGTCACTCCAATGCGAGGGGTGCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: CRTIQRGSPTDG*GVTPMRGVPRH
Trigger: GTGCCTGGGCACCCCTCGCATTGGAGTGACCCCCCACCCATCTGTAGGGCTGCCTCTCTGGATGGTTCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335960.10
CDS GCA 72 bp AGCTCAGGAGATAGGCTTGGTAATGGAAATGGAAGGTaGCAGGGCCAGCCGGTGGCGGGAGGCTCTGGAACC +
Preference number: 6 (lower is better)
Translates to: SSGDRLGNGNGR*QGQPVAGGSGT
Trigger: GGTTCCAGAGCCTCCCGCCACCGGCTGGCCCTGGCACCTTCCATTTCCATTACCAAGCCTATCTCCTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp TCATCTCCTGAAGCTGTGGAGGAGGTGATGGTCCCCTaGATCCCGATCCCTGCGCCCTGGGACACAACCTCT +
Preference number: 6 (lower is better)
Translates to: SSPEAVEEVMVP*IPIPAPWDTTS
Trigger: AGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTCCTCCACAGCTTCAGGAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp ACAGGTGAGGTTGTTGCTGTAGTTGCCCGGGAAGCCTaGAGAGACGATGCGGCCGGTGGTGGCATTGCGGAT +
Preference number: 6 (lower is better)
Translates to: TGEVVAVVAREA*RDDAAGGGIAD
Trigger: ATCCGCAATGCCACCACCGGCCGCATCGTCTCTCCAGGCTTCCCGGGCAACTACAGCAACAACCTCACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS CAA 72 bp ACGGGCTCCTTTGAATCCCAGAAGGGCTGGGTGGCATaGAGACAGGTGAGATGCCTGGCGCCCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TGSFESQKGWVA*RQVRCLAPFSW
Trigger: CCAGCTGAAGGGCGCCAGGCATCTCACCTGTCTCAATGCCACCCAGCCCTTCTGGGATTCAAAGGAGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp GAGGTCTGTAGGGGAGTCCAGAGAGCCCTCTGGGCCTaGGAAATTCCAGCTACAAGGGCCTGGTGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: EVCRGVQRALWA*EIPATRAWCLD
Trigger: GTCCAGACACCAGGCCCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCTCTGGACTCCCCTACAGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp AATGGAAGCGGGCACTACCCCCTGGGTGGAGGCTGGTaGCAGTCACATCTCCATAAGCTGGACGACGGGGAA +
Preference number: 6 (lower is better)
Translates to: NGSGHYPLGGGW*QSHLHKLDDGE
Trigger: TTCCCCGTCGTCCAGCTTATGGAGATGTGACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGCTTCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp CACCAGGGCCTATGCGCAGCACTCGGATGTCCAGCATaGTGCGCTTGTCCTCTTCCACATGCACACCCCAGA +
Preference number: 6 (lower is better)
Translates to: HQGLCAALGCPA*CACPLPHAHPR
Trigger: TCTGGGGTGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGACATCCGAGTGCTGCGCATAGGCCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp CTGGAAGGCCTCATAGCGCAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAA +
Preference number: 6 (lower is better)
Translates to: LEGLIAQGHACS*PAAVSTELNKE
Trigger: TTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGCCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540632.6
CDS GCA 72 bp GTGTGCTGCCTCATAGCGCAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAA +
Preference number: 6 (lower is better)
Translates to: VCCLIAQGHACS*PAAVSTELNKE
Trigger: TTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGCAGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540419.5
CDS GCA 72 bp AGGCTCACCCTCATAGCGCAGGGCCATGCCTGCAGCTaGCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAA +
Preference number: 6 (lower is better)
Translates to: RLTLIAQGHACS*PAAVSTELNKE
Trigger: TTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGCAGGCATGGCCCTGCGCTATGAGGGTGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539265.1
CDS CCA 72 bp TTGAGCAGCTTCAAGGTGGGGGCTGTTGTGACAAAGTaGACGCCTCGTTCTGGCTGCTCAGGTGTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: LSSFKVGAVVTK*TPRSGCSGVGA
Trigger: AGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACCTTGAAGCTGCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS CCA 72 bp GTAGCCAGTGGCACAATGGAAGCGGGCACTACCCCCTaGGTGGAGGCTGGTGACAGTCACATCTCCATAAGC +
Preference number: 6 (lower is better)
Translates to: VASGTMEAGTTP*VEAGDSHISIS
Trigger: GCTTATGGAGATGTGACTGTCACCAGCCTCCACCCAGGGGGTAGTGCCCGCTTCCATTGTGCCACTGGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CAA 90 bp TCACCAGGGCCTATGCGCAGCACTCGGATGTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACACCCCAGATACAATCCTGCCCACGA +
Preference number: 6 (lower is better)
Translates to: SPGPMRSTRMSSMMR*SSSTCTPQIQSCPR
Trigger: TCGTGGGCAGGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGACATCCGAGTGCTGCGCATAGGCCCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS GCA 72 bp ACGGGAAACTTGGGGCTGGATATGAGGCGTCGGCTGTaGTCCACATCTCCAGGATCGTGGCAGGAAGTCACT +
Preference number: 6 (lower is better)
Translates to: TGNLGLDMRRRL*STSPGSWQEVT
Trigger: AGTGACTTCCTGCCACGATCCTGGAGATGTGGAGCACAGCCGACGCCTCATATCCAGCCCCAAGTTTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544224.2
CDS CCA 72 bp TCCAGCCCCTCTTGTAGGAATTCCTCAAGCAGCGGGTaGTGGTTGAGCAGCTTCAAGGTGGGGGCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: SSPSCRNSSSSG*WLSSFKVGAVV
Trigger: CACAACAGCCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGAATTCCTACAAGAGGGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS CCA 72 bp TGGGTGGAGGCTGGTGACAGTCACATCTCCATAAGCTaGACGACGGGGAAAGTGGCAGCTCAGGAGATAGGC +
Preference number: 6 (lower is better)
Translates to: WVEAGDSHISIS*TTGKVAAQEIG
Trigger: GCCTATCTCCTGAGCTGCCACTTTCCCCGTCGTCCAGCTTATGGAGATGTGACTGTCACCAGCCTCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CAA 90 bp GCAGCTGCCCCGCTGCTGTCAGTACTGAGCTCAACAAAGAAGTGTTaGCCAGAGCTGAGCAGGCCCTCAATGGGCAGGTATTCCACCTCA +
Preference number: 6 (lower is better)
Translates to: AAAPLLSVLSSTKKC*PELSRPSMGRYSTS
Trigger: TGAGGTGGAATACCTGCCCATTGAGGGCCTGCTCAGCTCTGGCAAACACTTCTTTGTTGAGCTCAGTACTGACAGCAGCGGGGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp AGCCCCTCTTGTAGGAATTCCTCAAGCAGCGGGTGGTaGTTGAGCAGCTTCAAGGTGGGGGCTGTTGTGACA +
Preference number: 6 (lower is better)
Translates to: SPSCRNSSSSGW*LSSFKVGAVVT
Trigger: TGTCACAACAGCCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGAATTCCTACAAGAGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS CCA 72 bp GGGCCTGAGAAATTCCAGCTACAAGGGCCTGGTGTCTaGACTGTGGTGATGGTGGTGGTGATGATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GPEKFQLQGPGV*TVVMVVVMMVV
Trigger: CACCACCATCATCACCACCACCATCACCACAGTCCAGACACCAGGCCCTTGTAGCTGGAATTTCTCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp CCAGGATCGTGGCAGGAAGTCACTATGGGTAGGGGGTaGTGGGGAGAAGTAGCCCAAGGAGAACTAAGCAGA +
Preference number: 6 (lower is better)
Translates to: PGSWQEVTMGRG*WGEVAQGELSR
Trigger: TCTGCTTAGTTCTCCTTGGGCTACTTCTCCCCATCACCCCCTACCCATAGTGACTTCCTGCCACGATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544224.2
CDS CAA 72 bp CCCTCTTGTAGGAATTCCTCAAGCAGCGGGTGGTGGTaGAGCAGCTTCAAGGTGGGGGCTGTTGTGACAAAG +
Preference number: 6 (lower is better)
Translates to: PSCRNSSSSGWW*SSFKVGAVVTK
Trigger: CTTTGTCACAACAGCCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGAATTCCTACAAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000585644.1
CDS CAA 72 bp GAATCATACACTGGTGGGGCCTCCACGTTGTCCCCATaGCGAATGATGAGCCTGTCATCATCCTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: ESYTGGASTLSP*RMMSLSSSSAR
Trigger: CCTGGCAGAGGATGATGACAGGCTCATCATTCGCAATGGGGACAACGTGGAGGCCCCACCAGTGTATGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS CAA 72 bp CCTATGCGCAGCACTCGGATGTCCAGCATGATGCGCTaGTCCTCTTCCACATGCACACCCCAGATACAATCC +
Preference number: 6 (lower is better)
Translates to: PMRSTRMSSMMR*SSSTCTPQIQS
Trigger: GGATTGTATCTGGGGTGTGCATGTGGAAGAGGACAAGCGCATCATGCTGGACATCCGAGTGCTGCGCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000540419.5
ENST00000540632.6
CDS CCA 72 bp GGGCAGGTATTCCACCTCATAGGAATCATACACTGGTaGGGCCTCCACGTTGTCCCCATTGCGAATGATGAG +
Preference number: 6 (lower is better)
Translates to: GQVFHLIGIIHW*GLHVVPIANDE
Trigger: CTCATCATTCGCAATGGGGACAACGTGGAGGCCCCACCAGTGTATGATTCCTATGAGGTGGAATACCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6
CDS TCA 72 bp AAGAGATCCAGTCTCGTAAGTTGGATTGTCAAACGCTaGCTCTATGGTAATGCGGTTGTAGGGGCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: KRSSLVSWIVKR*LYGNAVVGAGA
Trigger: CGCCCCCGCCCCTACAACCGCATTACCATAGAGTCAGCGTTTGACAATCCAACTTACGAGACTGGATCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317338.17
ENST00000335960.10
CDS CCA 72 bp AATGGGCAGGTATTCCACCTCATAGGAATCATACACTaGTGGGGCCTCCACGTTGTCCCCATTGCGAATGAT +
Preference number: 6 (lower is better)
Translates to: NGQVFHLIGIIH*WGLHVVPIAND
Trigger: ATCATTCGCAATGGGGACAACGTGGAGGCCCCACCAGTGTATGATTCCTATGAGGTGGAATACCTGCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317338.17
ENST00000335960.10
ENST00000360295.13
ENST00000442608.7
ENST00000539265.1
ENST00000540419.5
ENST00000540632.6