RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETX (Homo sapiens)

Ensembl gene IDs: ENSG00000107290

Ensembl transcript IDs: ENST00000224140.6, ENST00000436441.5, ENST00000464133.1, ENST00000474172.1, ENST00000477049.1

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCAGGAAGTCACCTaGTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCA +
Preference number: 1 (lower is better)
Translates to: EAVADSGDKALQEVT*SLGFRSIQLTVWTP
Trigger: TGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGGAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp GGCCTGCCCCAGTGGTTCCCAAGCTGCCTGGTGATCAGAATCCCTTaGGAAATGTTGAACACACAGCTTCCCAGGCTTTCTGGAAAACTA +
Preference number: 1 (lower is better)
Translates to: GLPQWFPSCLVIRIP*EMLNTQLPRLSGKL
Trigger: TAGTTTTCCAGAAAGCCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGAACCACTGGGGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR GCA 90 bp CCCGCCCAAAATATTCTATTTGGCCTGCCCCAGTGGTTCCCAAGCTaGCTGGTGATCAGAATCCCTTGGGAAATGTTGAACACACAGCTT +
Preference number: 1 (lower is better)
Translates to: PAQNILFGLPQWFPS*LVIRIPWEMLNTQL
Trigger: AAGCTGTGTGTTCAACATTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGAACCACTGGGGCAGGCCAAATAGAATATTTTGGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR GCA 90 bp CCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTaGGCTGACAGCCACATCAGGAGGGGCCACGGTGAACATAGGAAA +
Preference number: 1 (lower is better)
Translates to: PHFTPCKKNSPVQQR*ADSHIRRGHGEHRK
Trigger: TTTCCTATGTTCACCGTGGCCCCTCCTGATGTGGCTGTCAGCGCAGCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp TGCGCTGACAGCCACATCAGGAGGGGCCACGGTGAACATAGGAAATaGCTTTGGCAAATACTTGTACCAACTGGAACGAGTGAAGTTTCA +
Preference number: 1 (lower is better)
Translates to: CADSHIRRGHGEHRK*LWQILVPTGTSEVS
Trigger: TGAAACTTCACTCGTTCCAGTTGGTACAAGTATTTGCCAAAGCCATTTCCTATGTTCACCGTGGCCCCTCCTGATGTGGCTGTCAGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp GAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTaGACACCAGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAA +
Preference number: 1 (lower is better)
Translates to: EVTCSLGFRSIQLTV*TPVRETQVMKSNAQ
Trigger: TTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp AGATCACAGGAAGTCTACCACTCTCTTCCCAGTTCTGAACTCCTCTaGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAA +
Preference number: 1 (lower is better)
Translates to: RSQEVYHSLPSSELL*LRFILNRVLLSRPK
Trigger: TTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCAGAGGAGTTCAGAACTGGGAAGAGAGTGGTAGACTTCCTGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp CAGGAAAGCAAACTTAAAGTAACGAGATTTCTTCCCAAAGGCACATaGAAGAAGCTGATAGAGCCCTTGACCCAGACAGAATGGGACCCA +
Preference number: 1 (lower is better)
Translates to: QESKLKVTRFLPKGT*KKLIEPLTQTEWDP
Trigger: TGGGTCCCATTCTGTCTGGGTCAAGGGCTCTATCAGCTTCTTCCATGTGCCTTTGGGAAGAAATCTCGTTACTTTAAGTTTGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp GACAGCCACATCAGGAGGGGCCACGGTGAACATAGGAAATGGCTTTaGCAAATACTTGTACCAACTGGAACGAGTGAAGTTTCAAAAGTA +
Preference number: 1 (lower is better)
Translates to: DSHIRRGHGEHRKWL*QILVPTGTSEVSKV
Trigger: TACTTTTGAAACTTCACTCGTTCCAGTTGGTACAAGTATTTGCCAAAGCCATTTCCTATGTTCACCGTGGCCCCTCCTGATGTGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 90 bp GCCATGCCTCCCTTTAGAAGCTTAGGAGTTTGTACATTCCCTAAGTaGTCAGCACTACAAGTGTCTGCTAAAATGGGCACTTCATCAAGA +
Preference number: 1 (lower is better)
Translates to: AMPPFRSLGVCTFPK*SALQVSAKMGTSSR
Trigger: TCTTGATGAAGTGCCCATTTTAGCAGACACTTGTAGTGCTGACCACTTAGGGAATGTACAAACTCCTAAGCTTCTAAAGGGAGGCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 90 bp CAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTaGAAGCTTTTGCAAATGACAGAAAATACTGAAGATGACCAGAGG +
Preference number: 1 (lower is better)
Translates to: QSLTSRTLLRIHNAL*KLLQMTENTEDDQR
Trigger: CCTCTGGTCATCTTCAGTATTTTCTGTCATTTGCAAAAGCTTTCAGAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 90 bp TGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTaGATGATAGCTCAAGAATTATTCTTTCACTCCATATTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: CTSPVTQGSQYAGSI*MIAQELFFHSIFFS
Trigger: AGAGAAGAATATGGAGTGAAAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 90 bp ACACCTATCAGATATTCTAAACAGCATGTATTTTTACCAGGTAGATaGTTTCTGAAGATCACAGGAAGTCTACCACTCTCTTCCCAGTTC +
Preference number: 1 (lower is better)
Translates to: TPIRYSKQHVFLPGR*FLKITGSLPLSSQF
Trigger: GAACTGGGAAGAGAGTGGTAGACTTCCTGTGATCTTCAGAAATCATCTACCTGGTAAAAATACATGCTGTTTAGAATATCTGATAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTTTTGGCCTGCCCCAGTaGTTCCCAAGCTGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSFGLPQ*FPSCLV
Trigger: CACCAGGCAGCTTGGGAACCACTGGGGCAGGCCAAA...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAGAGGAAGCAGTGGCTaGCTCTGGGGACAAAGCACT +
Preference number: 2 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSRGSSG*LWGQST
Trigger: AGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTGCTCTAACAATGGTTaGAAGGACCCGCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSCSNNG*KDPPSS
Trigger: GGAGGAGGGCGGGTCCTTTCAACCATTGTTAGAGCA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCGATTCTTCCACAGCTaGCCCAGCGCTAATCTAGCA +
Preference number: 2 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDRFFHS*PSANLA
Trigger: TGCTAGATTAGCGCTGGGTCAGCTGTGGAAGAATCG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACTTTCCTACCCCCAAATaGGATATGGGGCTGCACAGC +
Preference number: 2 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDFPTPK*DMGLHS
Trigger: GCTGTGCAGCCCCATATCTCATTTGGGGGTAGGAAA...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACAATATGCTGTGGCTaGTGGCCCATGTCACTGGGC +
Preference number: 2 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTICCG*WPMSLG
Trigger: GCCCAGTGACATGGGCCAGCAGCCACAGCATATTGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CAA 90 bp TGGCCTGCCCCAGTGGTTCCCAAGCTGCCTGGTGATCAGAATCCCTaGGGAAATGTTGAACACACAGCTTCCCAGGCTTTCTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: WPAPVVPKLPGDQNP*GNVEHTASQAFWKT
Trigger: AGTTTTCCAGAAAGCCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGAACCACTGGGGCAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCGATTCTTCCACAGCTaGCCCAGCGCTAATCTAGCA +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSRFFHS*PSANLA
Trigger: TGCTAGATTAGCGCTGGGTCAGCTGTGGAAGAATCG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTCCCAAGCTGCCTGGTaGTCAGAATCCCTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSSQAAW*SESLGK
Trigger: TTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCTTCAGTTTACAATATaGTGTGGCTGCTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLQFTI*CGCWPM
Trigger: CATGGGCCAGCAGCCACAGCATATTGTAAACTGAAG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCAGTGGTTCCCAAGCTaGCTGGTGATCAGAATCCCT +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSQWFPS*LVIRIP
Trigger: AGGGATTCTGATCACCAGGCAGCTTGGGAACCACTG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CAA 90 bp GCACTCCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTaGACCGTCTGGACACCAGTGAGGGAGACACAGGTAATGAAATCA +
Preference number: 2 (lower is better)
Translates to: ALQEVTCSLGFRSIQ*TVWTPVRETQVMKS
Trigger: TGATTTCATTACCTGTGTCTCCCTCACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATCCCTTGGGAAATGTTaGACACACAGCTTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SSVRDILTPTFLPCLPLESLGKC*THSFPG
Trigger: GCCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATCCCCCAAATGAGATATaGGGCTGCACAGCATTCACT +
Preference number: 2 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDPPNEI*GCTAFT
Trigger: AGTGAATGCTGTGCAGCCCCATATCTCATTTGGGGG...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTACAAGCTTATCTAGATaGTCCCACGAGCTGGTCATC +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSTSLSR*SHELVI
Trigger: GATGACCAGCTCGTGGGACCATCTAGATAAGCTTGT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATTTGGCCTGCCCCAGTaGTTCCCAAGCTGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKFGLPQ*FPSCLV
Trigger: CACCAGGCAGCTTGGGAACCACTGGGGCAGGCCAAA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCCAAAATATTCTATTTaGCCTGCCCCAGTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSPKYSI*PAPVVP
Trigger: GGGAACCACTGGGGCAGGCCAAATAGAATATTTTGG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCTCCAGTTCACTGCGTaGATATTTGGAAAACTGGAC +
Preference number: 2 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDLQFTA*IFGKLD
Trigger: GTCCAGTTTTCCAAATATCCACGCAGTGAACTGGAG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCACAATATGCTGTGGCTaGTGGCCCATGTCACTGGGC +
Preference number: 2 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRTICCG*WPMSLG
Trigger: GCCCAGTGACATGGGCCAGCAGCCACAGCATATTGT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGATGGTCCCACGAGCTaGTCATCTTCAGTTTACAAT +
Preference number: 2 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDDGPTS*SSSVYN
Trigger: ATTGTAAACTGAAGATGACCAGCTCGTGGGACCATC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACCAAAATATTCTATTTaGCCTGCCCCAGTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEPKYSI*PAPVVP
Trigger: GGGAACCACTGGGGCAGGCCAAATAGAATATTTTGG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGGATATTTGGAAAACTaGACAAAATCAGGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSGYLEN*TKSGSP
Trigger: TGGGCTGCCTGATTTTGTCCAGTTTTCCAAATATCC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACATACACAATGCCCTCTaGAAGCTTTTGCAAATGACA +
Preference number: 2 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDIHNAL*KLLQMT
Trigger: TGTCATTTGCAAAAGCTTTCAGAGGGCATTGTGTAT...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAGAGCCAGAGACACCTaGCCCACCAGCACTAACTCA +
Preference number: 2 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIRARDT*PTSTNS
Trigger: TGAGTTAGTGCTGGTGGGTCAGGTGTCTCTGGCTCT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTATGCTGGGAGCATTTaGATGATAGCTCAAGAATTA +
Preference number: 2 (lower is better)
Translates to: KLSTPTEEAVADSGDKALYAGSI*MIAQEL
Trigger: TAATTCTTGAGCTATCATTCAAATGCTCCCAGCATA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAGAGGAAGCAGTGGCTaGCTCTGGGGACAAAGCACT +
Preference number: 2 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIRGSSG*LWGQST
Trigger: AGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTAATGAGATATGGGGCTaGACAGCATTCACTACAGAT +
Preference number: 2 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSNEIWG*TAFTTD
Trigger: ATCTGTAGTGAATGCTGTGCAGCCCCATATCTCATT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATTGACCCAGACAGAATaGGACCCATCCCTACCCGTC +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKLTQTE*DPSLPV
Trigger: GACGGGTAGGGATGGGTCCCATTCTGTCTGGGTCAA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGATACTCCAGTTCACTaGGTGGATATTTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDDTPVH*VDIWKT
Trigger: AGTTTTCCAAATATCCACGCAGTGAACTGGAGTATC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATAACATTTCCAGTCTCTaGCTTCAAGGACATTATTAC +
Preference number: 2 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDNISSL*LQGHYY
Trigger: GTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATGCTCTAACAATGGTTaGAAGGACCCGCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKCSNNG*KDPPSS
Trigger: GGAGGAGGGCGGGTCCTTTCAACCATTGTTAGAGCA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTAGAGCCAGAGACACCTaGCCCACCAGCACTAACTCA +
Preference number: 2 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIRARDT*PTSTNS
Trigger: TGAGTTAGTGCTGGTGGGTCAGGTGTCTCTGGCTCT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACAGAATCAGATCTGCTaGGTGGTGAACCAACAGGTG +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKQNQIC*VVNQQV
Trigger: CACCTGTTGGTTCACCACTCAGCAGATCTGATTCTG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGTTTACAATATGCTGTaGCTGCTGGCCCATGTCACT +
Preference number: 2 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRVYNML*LLAHVT
Trigger: AGTGACATGGGCCAGCAGCCACAGCATATTGTAAAC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACCCCCAAATGAGATATaGGGCTGCACAGCATTCACT +
Preference number: 2 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIPPNEI*GCTAFT
Trigger: AGTGAATGCTGTGCAGCCCCATATCTCATTTGGGGG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACTGTCGCACACTGCATaGCCAAAGACAAACTCTCCA +
Preference number: 2 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRILSHTA*PKTNSP
Trigger: TGGAGAGTTTGTCTTTGGCCATGCAGTGTGCGACAG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATATGCTGGGAGCATTTaGATGATAGCTCAAGAATTA +
Preference number: 2 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEYAGSI*MIAQEL
Trigger: TAATTCTTGAGCTATCATTCAAATGCTCCCAGCATA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGATGGTCCCACGAGCTaGTCATCTTCAGTTTACAAT +
Preference number: 2 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEDGPTS*SSSVYN
Trigger: ATTGTAAACTGAAGATGACCAGCTCGTGGGACCATC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACCTCTAATAGTAGCTaGAAACACCTATCAGATATT +
Preference number: 2 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTSNSS*KHLSDI
Trigger: AATATCTGATAGGTGTTTCCAGCTACTATTAGAGGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAAGTCACCTGCTCCCTaGGTTTCAGGAGTATTCAGT +
Preference number: 2 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIKSPAP*VSGVFS
Trigger: ACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTTCAGTTTACAATATaGTGTGGCTGCTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLQFTI*CGCWPM
Trigger: CATGGGCCAGCAGCCACAGCATATTGTAAACTGAAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGTTTACAATATGCTGTaGCTGCTGGCCCATGTCACT +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKVYNML*LLAHVT
Trigger: AGTGACATGGGCCAGCAGCCACAGCATATTGTAAAC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAGGCTCACAATATGCTaGGAGCATTTGAATGATAGC +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKRLTIC*EHLNDS
Trigger: GCTATCATTCAAATGCTCCCAGCATATTGTGAGCCT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAATACCCTGGGCCAATaGACTCTATCTAAAAATGCA +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKNTLGQ*TLSKNA
Trigger: TGCATTTTTAGATAGAGTGCATTGGCCCAGGGTATT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGATACTCCAGTTCACTaGGTGGATATTTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIDTPVH*VDIWKT
Trigger: AGTTTTCCAAATATCCACGCAGTGAACTGGAGTATC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCAGAAATATAATACCCTaGGCCAATGCACTCTATCTA +
Preference number: 2 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRRNIIP*ANALYL
Trigger: TAGATAGAGTGCATTGGCCCAGGGTATTATATTTCT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTCCAGTTCACTGCGTaGATATTTGGAAAACTGGAC +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLQFTA*IFGKLD
Trigger: GTCCAGTTTTCCAAATATCCACGCAGTGAACTGGAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CAA 90 bp CTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTaGAATGATAGCTCAAGAATTATTCTTTCACTCCATATTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LYLTSHTRLTICWEH*NDSSRIILSLHILL
Trigger: GAGAAGAATATGGAGTGAAAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAAATGAGATATGGGGCTaGACAGCATTCACTACAGAT +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKNEIWG*TAFTTD
Trigger: ATCTGTAGTGAATGCTGTGCAGCCCCATATCTCATT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATCTACCATTAATTCTTaGAGAATCAGATCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKSTINS*RIRSAE
Trigger: CTCAGCAGATCTGATTCTGCAAGAATTAATGGTAGA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAGAAATATAATACCCTaGGCCAATGCACTCTATCTA +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKRNIIP*ANALYL
Trigger: TAGATAGAGTGCATTGGCCCAGGGTATTATATTTCT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAATACACAATGCCCTCTaGAAGCTTTTGCAAATGACA +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKIHNAL*KLLQMT
Trigger: TGTCATTTGCAAAAGCTTTCAGAGGGCATTGTGTAT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAACAAGGCTCACAATATaGTGGGAGCATTTGAATGAT +
Preference number: 2 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKTRLTI*WEHLND
Trigger: ATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAACCTCTAATAGTAGCTaGAAACACCTATCAGATATT +
Preference number: 2 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKTSNSS*KHLSDI
Trigger: AATATCTGATAGGTGTTTCCAGCTACTATTAGAGGT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTCAGCCCACCCCTCCCTaGTCCCGAGCTTCCTCGATC +
Preference number: 3 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSQPTPP*SRASSI
Trigger: GATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 72 bp AGACAAACTCTCCACCCCCACAGAGGAAGCAGTGGCTaGCTCTGGGGACAAAGCACTCCAGGAAGTCACCTG +
Preference number: 3 (lower is better)
Translates to: RQTLHPHRGSSG*LWGQSTPGSHL
Trigger: CAGGTGACTTCCTGGAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR GCA 72 bp GCTGACTCTGGGGACAAAGCACTCCAGGAAGTCACCTaGTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTC +
Preference number: 3 (lower is better)
Translates to: ADSGDKALQEVT*SLGFRSIQLTV
Trigger: GACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGGAGTGCTTTGTCCCCAGAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp TGGAAGAAGCTGATAGAGCCCTTGACCCAGACAGAATaGGACCCATCCCTACCCGTCCTGAACTGTCGCACA +
Preference number: 3 (lower is better)
Translates to: WKKLIEPLTQTE*DPSLPVLNCRT
Trigger: TGTGCGACAGTTCAGGACGGGTAGGGATGGGTCCCATTCTGTCTGGGTCAAGGGCTCTATCAGCTTCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR GCA 72 bp ACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTaGGCTGACAGCCACATCAGGAGGGGCCACGGTGAA +
Preference number: 3 (lower is better)
Translates to: TPCKKNSPVQQR*ADSHIRRGHGE
Trigger: TTCACCGTGGCCCCTCCTGATGTGGCTGTCAGCGCAGCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp CAGTGGTTCCCAAGCTGCCTGGTGATCAGAATCCCTTaGGAAATGTTGAACACACAGCTTCCCAGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: QWFPSCLVIRIP*EMLNTQLPRLS
Trigger: AGAAAGCCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGAACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp TGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTaGACACCAGTGAGGGAGACACAGGTAATGAAATCA +
Preference number: 3 (lower is better)
Translates to: CSLGFRSIQLTV*TPVRETQVMKS
Trigger: TGATTTCATTACCTGTGTCTCCCTCACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp AGCCACATCAGGAGGGGCCACGGTGAACATAGGAAATaGCTTTGGCAAATACTTGTACCAACTGGAACGAGT +
Preference number: 3 (lower is better)
Translates to: SHIRRGHGEHRK*LWQILVPTGTS
Trigger: ACTCGTTCCAGTTGGTACAAGTATTTGCCAAAGCCATTTCCTATGTTCACCGTGGCCCCTCCTGATGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCATATGCTGGGAGCATTaGAATGATAGCTCAAGAATT +
Preference number: 3 (lower is better)
Translates to: KLSTPTEEAVADSGDKALICWEH*NDSSRI
Trigger: AATTCTTGAGCTATCATTCAAATGCTCCCAGCATAT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 72 bp CTGACAATCTGTAAGCTGAGGCGATTCTTCCACAGCTaGCCCAGCGCTAATCTAGCATTTGGCAACCAAATG +
Preference number: 3 (lower is better)
Translates to: LTICKLRRFFHS*PSANLAFGNQM
Trigger: CATTTGGTTGCCAAATGCTAGATTAGCGCTGGGTCAGCTGTGGAAGAATCGCCTCAGCTTACAGATTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR GCA 72 bp AATATTCTATTTGGCCTGCCCCAGTGGTTCCCAAGCTaGCTGGTGATCAGAATCCCTTGGGAAATGTTGAAC +
Preference number: 3 (lower is better)
Translates to: NILFGLPQWFPS*LVIRIPWEMLN
Trigger: GTTCAACATTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGAACCACTGGGGCAGGCCAAATAGAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTTCAGGAGTATTCAGTaGACCGTCTGGACACCAGTG +
Preference number: 3 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRFRSIQ*TVWTPV
Trigger: CACTGGTGTCCAGACGGTCAACTGAATACTCCTGAA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAATCCCTTGGGAAATGTaGAACACACAGCTTCCCAGG +
Preference number: 3 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKIPWEM*NTQLPR
Trigger: CCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGAT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACCCAAAATATTCTATTaGGCCTGCCCCAGTGGTTCC +
Preference number: 3 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKPKIFY*ACPSGS
Trigger: GGAACCACTGGGGCAGGCCAAATAGAATATTTTGGG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATATTCAGGAGTATTCAGTaGACCGTCTGGACACCAGTG +
Preference number: 3 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIFRSIQ*TVWTPV
Trigger: CACTGGTGTCCAGACGGTCAACTGAATACTCCTGAA...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp ATCAGGAGGGGCCACGGTGAACATAGGAAATGGCTTTaGCAAATACTTGTACCAACTGGAACGAGTGAAGTT +
Preference number: 3 (lower is better)
Translates to: IRRGHGEHRKWL*QILVPTGTSEV
Trigger: AACTTCACTCGTTCCAGTTGGTACAAGTATTTGCCAAAGCCATTTCCTATGTTCACCGTGGCCCCTCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp CCCTTTAGAAGCTTAGGAGTTTGTACATTCCCTAAGTaGTCAGCACTACAAGTGTCTGCTAAAATGGGCACT +
Preference number: 3 (lower is better)
Translates to: PFRSLGVCTFPK*SALQVSAKMGT
Trigger: AGTGCCCATTTTAGCAGACACTTGTAGTGCTGACCACTTAGGGAATGTACAAACTCCTAAGCTTCTAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CCA 72 bp TACATTCTCATGTTTAGGATACTCCAGTTCACTGCGTaGATATTTGGAAAACTGGACAAAATCAGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: YILMFRILQFTA*IFGKLDKIRQP
Trigger: GGGCTGCCTGATTTTGTCCAGTTTTCCAAATATCCACGCAGTGAACTGGAGTATCCTAAACATGAGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCATATGCTGGGAGCATTaGAATGATAGCTCAAGAATT +
Preference number: 3 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRICWEH*NDSSRI
Trigger: AATTCTTGAGCTATCATTCAAATGCTCCCAGCATAT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR-3UTR CAA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACAAATGCTCAAACTTTaGGCAACCGAAAGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIQMLKL*ATESCF
Trigger: AAAACAACTTTCGGTTGCCAAAAGTTTGAGCATTTG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 72 bp CCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTaGATGATAGCTCAAGAATTATTCTTTCACTCCATA +
Preference number: 3 (lower is better)
Translates to: PVTQGSQYAGSI*MIAQELFFHSI
Trigger: TATGGAGTGAAAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR TCA 72 bp CTAAACAGCATGTATTTTTACCAGGTAGATGATTTCTaGAGATCACAGGAAGTCTACCACTCTCTTCCCAGT +
Preference number: 3 (lower is better)
Translates to: LNSMYFYQVDDF*RSQEVYHSLPS
Trigger: ACTGGGAAGAGAGTGGTAGACTTCCTGTGATCTTCAGAAATCATCTACCTGGTAAAAATACATGCTGTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACTGGCCTCTCTCCTGTaGCAGAGCTCCTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQLASLL*QSSSSG
Trigger: CCCGGAAGAGGAGCTCTGTCACAGGAGAGAGGCCAG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATTGGCTCAGGTCCTGGTaGACGACAGGGAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDWLRSW*TTGKPG
Trigger: GCCGGGCTTCCCTGTCGTTCACCAGGACCTGAGCCA...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAATGTCTAGCTTGCTGCTaGGCAAACCACCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQCLACC*ANHPGV
Trigger: GACCCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACA...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTTTGGCCTGCCCCAGTaGTTCCCAAGCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALFGLPQ*FPSCLV
Trigger: CACCAGGCAGCTTGGGAACCACTGGGGCAGGCCAAA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTCGGCATAGAGCTCGCTaGCGGGAAAGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSRHRAR*RESSSS
Trigger: GCTGGATGAGCTTTCCCGGCAGCGAGCTCTATGCCG...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAACTACAGCAGCGGGCTaGTGTATATGGCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQTTAAG*CIWLRS
Trigger: GGACCTGAGCCATATACAGCAGCCCGCTGCTGTAGT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTATTTCGCTCTCTGGCTaGCGTCGGCCTCTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSISLSG*RRPLAH
Trigger: GTGGGCTAGAGGCCGACGCCAGCCAGAGAGCGAAAT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCGCACGGGAGGTTTGTaGCTGCTCAGAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDRTGGL*LLRAAT
Trigger: AGTGGCTGCTCTGAGCAGCCACAAACCTCCCGTGCG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATGGAAGCCTCGGGACTaGCAGCTGGAGGTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEWKPRD*QLEVRP
Trigger: GGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAATTTGCTCTGACACGTaGAAGCCTCGGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQICSDT*KPRDWQ
Trigger: CTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAAT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTCACCAACTGGCTTCTaGGCTATGAGGGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSPTGF*AMRGTG
Trigger: GCCAGTTCCCCTCATAGCTCAGAAGCCAGTTGGTGA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACGATTCTTCCACAGCTaGCCCAGCGCTAATCTAGCA +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQRFFHS*PSANLA
Trigger: TGCTAGATTAGCGCTGGGTCAGCTGTGGAAGAATCG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAATCCCTTGGGAAATGTTaGACACACAGCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQSLGKC*THSFPG
Trigger: GCCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGA...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAATCCCAAGCTGCCTGGTaGTCAGAATCCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQSQAAW*SESLGK
Trigger: TTTCCCAAGGGATTCTGATCACCAGGCAGCTTGGGA...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAAGGGGACACCCCCTTaGCCACGGAAAGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSKGTPP*PRKADS
Trigger: TGAGTCTGCTTTCCGTGGGCAAGGGGGTGTCCCCTT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACTGCCGACCCTGGAATaGATCCACAGTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQLPTLE*IHSVYF
Trigger: GAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCACAATATGCTGTGGCTaGTGGCCCATGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALTICCG*WPMSLG
Trigger: GCCCAGTGACATGGGCCAGCAGCCACAGCATATTGT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAGGGTCTGGACCCCTCTaGGGCTATGGTAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEGSGPL*GYGRRV
Trigger: CACCCTCCTACCATAGCCCCAGAGGGGTCCAGACCC...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCTCGGGACTGGCAGCTaGAGGTTCGCCCCGCACGGG +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRLGTGS*RFAPHG
Trigger: CCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACTCGGGACTGGCAGCTaGAGGTTCGCCCCGCACGGG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFELGTGS*RFAPHG
Trigger: CCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTTGACCCAGACAGAATaGGACCCATCCCTACCCGTC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLTQTE*DPSLPV
Trigger: GACGGGTAGGGATGGGTCCCATTCTGTCTGGGTCAA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGTTGGCTCAGGACACTaGCGAAATTTCTTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALVGSGH*RNFFGG
Trigger: GCCGCCAAAGAAATTTCGTCAGTGTCCTGAGCCAAC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGCTATGGTAGGAGGGTaGGTGAGACTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDAMVGG*VRLLCS
Trigger: GCTGCAGAGAAGTCTCACTCACCCTCCTACCATAGC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTTGCTCTAACAATGGTTaGAAGGACCCGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSCSNNG*KDPPSS
Trigger: GGAGGAGGGCGGGTCCTTTCAACCATTGTTAGAGCA...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATAAGGGGACACCCCCTTaGCCACGGAAAGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDKGTPP*PRKADS
Trigger: TGAGTCTGCTTTCCGTGGGCAAGGGGGTGTCCCCTT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCTCCAGGAAGTCACCTaGTCCCTGGGTTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDLQEVT*SLGFRS
Trigger: ACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGGAG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGAACATTTCGCTCTCTaGCTGGCGTCGGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDEHFAL*LASASS
Trigger: GCTAGAGGCCGACGCCAGCCAGAGAGCGAAATGTTC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAGTTGCTCCAGGATGCTaGGGGCTCGAGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEVAPGC*GLEGCG
Trigger: TCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAAC...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAGCTCATGGGTTTCCTaGCTAGTCAACTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSSWVS*LVNCQP
Trigger: AGGTTGGCAGTTGACTAGTCAGGAAACCCATGAGCT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAGAATGGGCAGCCTGCTaGTCATGTTGTGTTCTACAT +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQEWAAC*SCCVLH
Trigger: ATGTAGAACACAACATGATCAGCAGGCTGCCCATTC...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTGGCTCAGGTCCTGGTaGACGACAGGGAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRWLRSW*TTGKPG
Trigger: GCCGGGCTTCCCTGTCGTTCACCAGGACCTGAGCCA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTTCCCTTGGGAAATGTTaGACACACAGCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSSLGKC*THSFPG
Trigger: GCCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGA...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAACTGTTGAAACGTGCTaGTCTGGATGTTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQTVETC*SGCSLS
Trigger: TGAGAGGGAACATCCAGAGCAGCACGTTTCAACAGT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACATCTCTATATGACGTaGTGTTGGATCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQHLYMT*CWITST
Trigger: GGTGGAGGTGATCCAACAGCACGTCATATAGAGATG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTCTGCCGACCCTGGAATaGATCCACAGTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSLPTLE*IHSVYF
Trigger: GAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAG...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTATCCACTGTCTAGCTTaGTGCTGGGCAAACCACCCT +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSIHCLA*CWANHP
Trigger: AGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGAT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTACAATATGCTGTGGCTaGTGGCCCATGTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSTICCG*WPMSLG
Trigger: GCCCAGTGACATGGGCCAGCAGCCACAGCATATTGT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCTGGGCAAACCACCCTaGGGTCTGGACCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRLGKPP*GLDPSG
Trigger: CCCAGAGGGGTCCAGACCCCAGGGTGGTTTGCCCAG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAGAGTCAGAGGGTGTGTaGTATAGAGAAGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQESEGV*YREAAT
Trigger: TGTTGCTGCTTCTCTATACCACACACCCTCTGACTC...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCCTCTTCAGCAGTCGTaGGTCCTGAAGTTGGTCATG +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDPLQQS*VLKLVM
Trigger: CATGACCAACTTCAGGACCCACGACTGCTGAAGAGG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTATTTGCTCTGACACGTaGAAGCCTCGGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSICSDT*KPRDWQ
Trigger: CTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAAT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCCCCCAAATGAGATATaGGGCTGCACAGCATTCACT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALPPNEI*GCTAFT
Trigger: AGTGAATGCTGTGCAGCCCCATATCTCATTTGGGGG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTTGACCCAGACAGAATaGGACCCATCCCTACCCGTC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSLTQTE*DPSLPV
Trigger: GACGGGTAGGGATGGGTCCCATTCTGTCTGGGTCAA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CAA 72 bp GAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTaGACCGTCTGGACACCAGTGAGGGAGACACAGGTA +
Preference number: 4 (lower is better)
Translates to: EVTCSLGFRSIQ*TVWTPVRETQV
Trigger: TACCTGTGTCTCCCTCACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTACTGGCCCTCATTTCTaGCAGAAGATGAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSTGPHF*QKMKAS
Trigger: TGAGGCCTTCATCTTCTGTCAGAAATGAGGGCCAGT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCATTGGAGTTTTCGTCTaGATGCCCCTTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALIGVFV*MPLPLV
Trigger: AACCAGAGGAAGGGGCATTCAGACGAAAACTCCAAT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGAAGCGAGCCATCATTaGCTGGTCGTAGCCATACTC +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDEASHH*LVVAIL
Trigger: GAGTATGGCTACGACCAGTCAATGATGGCTCGCTTC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTTTCCTACCCCCAAATaGGATATGGGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSFPTPK*DMGLHS
Trigger: GCTGTGCAGCCCCATATCTCATTTGGGGGTAGGAAA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACTGTCGGAGGGAGCTaGTTAGGATCTCCTACTAGG +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTVGGS*LGSPTR
Trigger: CCTAGTAGGAGATCCTAAGCAGCTCCCTCCGACAGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGCTTTAGGAAGTCAATaGTGGAAGCACCACCTGGCG +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDALGSQ*WKHHLA
Trigger: CGCCAGGTGGTGCTTCCACCATTGACTTCCTAAAGC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGAATGCCCCTTCCTCTaGTTCTCTGTCAGTAGACGA +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDECPFL*FSVSRR
Trigger: TCGTCTACTGACAGAGAACCAGAGGAAGGGGCATTC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGGGTCTGGACCCCTCTaGGGCTATGGTAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRGSGPL*GYGRRV
Trigger: CACCCTCCTACCATAGCCCCAGAGGGGTCCAGACCC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGGGGCTCGAGGGTTGTaGATCCCAAAGGAATATTCC +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDGARGL*IPKEYS
Trigger: GGAATATTCCTTTGGGATCCACAACCCTCGAGCCCC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCCAAAATATTCTATTTaGCCTGCCCCAGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALPKYSI*PAPVVP
Trigger: GGGAACCACTGGGGCAGGCCAAATAGAATATTTTGG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTATTCAGTTGACCGTCTaGACACCAGTGAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSIQLTV*TPVRET
Trigger: TGTCTCCCTCACTGGTGTCCAGACGGTCAACTGAAT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCCCATTACGCATGACTaGCGTGCGGCGAAATTTATG +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSPITHD*RAAKFM
Trigger: CATAAATTTCGCCGCACGTCAGTCATGCGTAATGGG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATCCCATTACGCATGACTaGCGTGCGGCGAAATTTATG +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDPITHD*RAAKFM
Trigger: CATAAATTTCGCCGCACGTCAGTCATGCGTAATGGG...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAGCCAACAATAGTTTTTaGTTTTCCTGTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQANNSF*FSCSRW
Trigger: CCACCTGGAACAGGAAAATCAAAAACTATTGTTGGC...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACTTGGCTGTCCAAACTaGACTTTAGAACCTCACTAT +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQLGCPN*TLEPHY
Trigger: ATAGTGAGGTTCTAAAGTTCAGTTTGGACAGCCAAG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTGCCAGGAATCCAATTaGACCTTGGATGCTATTTGC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALCQESN*TLDAIC
Trigger: GCAAATAGCATCCAAGGTTCAATTGGATTCCTGGCA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTCAAATGTCCGAGGATaGAGAGGCTGTACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSSNVRG*RGCTWL
Trigger: GAGCCAAGTACAGCCTCTTCATCCTCGGACATTTGA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGGAATATTCCTCCTTTaGCCTCAATGCCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDGIFLL*PQCPSS
Trigger: AGAGGATGGGCATTGAGGTCAAAGGAGGAATATTCC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGAGTTTTCGTCTGAATaGCCCTTCCTCTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSEFSSE*PFLWFS
Trigger: AGAGAACCAGAGGAAGGGGCATTCAGACGAAAACTC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGAGTTCATCAACAGCTaGATTGGAAGGTGCACACAC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSEFINS*IGRCTH
Trigger: GTGTGTGCACCTTCCAATGCAGCTGTTGATGAACTC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAGTAGCCATACTCCTGTaGTTTCATAGAGATGACTGT +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQVAILL*FHRDDC
Trigger: ACAGTCATCTCTATGAAAGCACAGGAGTATGGCTAC...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACCGGGTCATCACATTTaGTCTGACACGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEPGHHI*SDTWKP
Trigger: AGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAGAACCACACTTCTCCTaGTCCCCTTCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEEPHFS*SPSLKA
Trigger: GGCTTTCAGTGAAGGGGAGCAGGAGAAGTGTGGTTC...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACAGTGGTTCCCAAGCTaGCTGGTGATCAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEQWFPS*LVIRIP
Trigger: AGGGATTCTGATCACCAGGCAGCTTGGGAACCACTG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTTAGGAAGTCAATGGTaGAAGCACCACCTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSLGSQW*KHHLAY
Trigger: GTACGCCAGGTGGTGCTTCCACCATTGACTTCCTAA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGAAGTCCATAGGGTTTaGATTCAGAACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALEVHRV*IQNSSS
Trigger: GCTAGAGCTGTTCTGAATCCAAACCCTATGGACTTC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGCAGCGATGGATGAGTaGAGTAAGAGTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALAAMDE*SKSLNF
Trigger: GAAATTGAGACTCTTACTCCACTCATCCATCGCTGC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAGCTTATTGCAGCGATaGATGAGTGGAGTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSLLQR*MSGVRV
Trigger: GACTCTTACTCCACTCATCCATCGCTGCAATAAGCT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTGGAAGCCTCGGGACTaGCAGCTGGAGGTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALWKPRD*QLEVRP
Trigger: GGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCTCCAGTTCACTGCGTaGATATTTGGAAAACTGGAC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLQFTA*IFGKLD
Trigger: GTCCAGTTTTCCAAATATCCACGCAGTGAACTGGAG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATATTCAGTTGACCGTCTaGACACCAGTGAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDIQLTV*TPVRET
Trigger: TGTCTCCCTCACTGGTGTCCAGACGGTCAACTGAAT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACATTTCTGACAGAAGATaGAGGCCTCACAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDISDRR*RPHRIF
Trigger: GAAGATCCTGTGAGGCCTTCATCTTCTGTCAGAAAT...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACCGTAGTGGCTCTCTaGATACGTGAATTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTVVAL*IRELGV
Trigger: AACTCCCAATTCACGTATTCAGAGAGCCACTACGGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGGAATATTCCTCCTTTaGCCTCAATGCCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDGIFLL*PQCPSS
Trigger: AGAGGATGGGCATTGAGGTCAAAGGAGGAATATTCC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCCTGCTCCCCTTCACTaGAAGCCCTGGCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALPAPLH*KPWPLS
Trigger: GGAGAGAGGCCAGGGCTTTCAGTGAAGGGGAGCAGG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCAGGTAGATGATTTCTaGAGATCACAGGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALQVDDF*RSQEVY
Trigger: GTAGACTTCCTGTGATCTTCAGAAATCATCTACCTG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACAGAATCAGATCTGCTaGGTGGTGAACCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEQNQIC*VVNQQV
Trigger: CACCTGTTGGTTCACCACTCAGCAGATCTGATTCTG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACTTTCCCCAAGTTTCTTaGAGTCAAGATAGCCCAACG +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDFPQVS*SQDSPT
Trigger: CGTTGGGCTATCTTGACTGCAAGAAACTTGGGGAAA...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACTACTCCAACAGTTTTaGCATGATCACGTAATTGAG +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQLLQQF*HDHVIE
Trigger: CTCAATTACGTGATCATGGCAAAACTGTTGGAGTAG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGGACTGACAAAGACTTaGAGGGGGCCCACACTGACC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEGLTKT*RGPTLT
Trigger: GGTCAGTGTGGGCCCCCTGCAAGTCTTTGTCAGTCC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGAGTTCATCAACAGCTaGATTGGAAGGTGCACACAC +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDEFINS*IGRCTH
Trigger: GTGTGTGCACCTTCCAATGCAGCTGTTGATGAACTC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACGGGAGGTTTGTGGCTaGTCAGAGCAGCCACTACAG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEREVCG*SEQPLQ
Trigger: CTGTAGTGGCTGCTCTGAGCAGCCACAAACCTCCCG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATCTTCAGTTTACAATATaGTGTGGCTGCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDLQFTI*CGCWPM
Trigger: CATGGGCCAGCAGCCACAGCATATTGTAAACTGAAG...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCTTCAGTTTACAATATaGTGTGGCTGCTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSLQFTI*CGCWPM
Trigger: CATGGGCCAGCAGCCACAGCATATTGTAAACTGAAG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTGACCCAGCTAAGAGATaGTCCTCTAGTTTCACATCC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSDPAKR*SSSFTS
Trigger: GGATGTGAAACTAGAGGACCATCTCTTAGCTGGGTC...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTTTTCCTGTTCCAGGTaGTCCATGAATCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALFSCSR*SMNQAD
Trigger: ATCTGCTTGATTCATGGACCACCTGGAACAGGAAAA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACATCAACAGCTGCATTaGAAGGTGCACACACGAGGA +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEHQQLH*KVHTRG
Trigger: TCCTCGTGTGTGCACCTTCCAATGCAGCTGTTGATG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTGGGCAAACCACCCTaGGGTCTGGACCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLGKPP*GLDPSG
Trigger: CCCAGAGGGGTCCAGACCCCAGGGTGGTTTGCCCAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGTCTAGCTTGCTGCTaGGCAAACCACCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFECLACC*ANHPGV
Trigger: GACCCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGTTGCTCCAGGATGCTaGGGGCTCGAGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIVAPGC*GLEGCG
Trigger: TCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAAC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGATGGTCCCACGAGCTaGTCATCTTCAGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSDGPTS*SSSVYN
Trigger: ATTGTAAACTGAAGATGACCAGCTCGTGGGACCATC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTAAGTCACCTGCTCCCTaGGTTTCAGGAGTATTCAGT +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSKSPAP*VSGVFS
Trigger: ACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTCATCTCCTCATCTCTTaGTTCAGGTACAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSHLLIS*FRYSHK
Trigger: CTTATGACTGTACCTGAATCAAGAGATGAGGAGATG...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAAACTGGAACTTTCCTaGTGGGTTCTGTACAAGTAC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSKLELS*WVLYKY
Trigger: GTACTTGTACAGAACCCATCAGGAAAGTTCCAGTTT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGGTCTTGAGATGGACTaGCAAAGACTTGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRGLEMD*QRLAGG
Trigger: GCCCCCTGCAAGTCTTTGTCAGTCCATCTCAAGACC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACTCTATTTGGAGAGTTaGGCCATTCTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLELYLES*AILVPL
Trigger: CAGTGGCACAAGAATGGCTCAACTCTCCAAATAGAG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGCCAACAATAGTTTTTaGTTTTCCTGTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDANNSF*FSCSRW
Trigger: CCACCTGGAACAGGAAAATCAAAAACTATTGTTGGC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAGAATGGGCAGCCTGCTaGTCATGTTGTGTTCTACAT +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEEWAAC*SCCVLH
Trigger: ATGTAGAACACAACATGATCAGCAGGCTGCCCATTC...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCATTATCCCGTCTTTCTaGACCATCTCCAACATCAAA +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALIIPSF*TISNIK
Trigger: TTTGATGTTGGAGATGGTTCAGAAAGACGGGATAAT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGCTATGGTAGGAGGGTaGGTGAGACTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRAMVGG*VRLLCS
Trigger: GCTGCAGAGAAGTCTCACTCACCCTCCTACCATAGC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTCTGGCCTCTCTCCTGTaGCAGAGCTCCTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRILASLL*QSSSSG
Trigger: CCCGGAAGAGGAGCTCTGTCACAGGAGAGAGGCCAG...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCAACTGCATTCCGCTGTaGAAGGCCGTCACAGGACAC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRNCIPL*KAVTGH
Trigger: GTGTCCTGTGACGGCCTTTCACAGCGGAATGCAGTT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAATGTTTTTACTACTCTaGTTTAAGCATGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQMFLLL*FKHDPA
Trigger: AGCTGGGTCATGCTTAAAGCAGAGTAGTAAAAACAT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAGCAAGCATCATCAGTTaGTGGAGACCCATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEASIIS*WRPMFC
Trigger: GCAAAACATGGGTCTCCAGCAACTGATGATGCTTGC...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCACCTTGGATGCTATTTaGTCTGACACACGTAACAAT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALTLDAI*SDTRNN
Trigger: ATTGTTACGTGTGTCAGAGCAAATAGCATCCAAGGT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCACTACAGCAGCGGGCTaGTGTATATGGCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRTTAAG*CIWLRS
Trigger: GGACCTGAGCCATATACAGCAGCCCGCTGCTGTAGT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCTCCAGGAAGTCACCTaGTCCCTGGGTTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRLQEVT*SLGFRS
Trigger: ACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGGAG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACCTGTTCAACAACGCTaGGCTGACAGCCACATCAGG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEPVQQR*ADSHIR
Trigger: CCTGATGTGGCTGTCAGCGCAGCGTTGTTGAACAGG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGACAACAGGGCTGTTTaGCAAATCGCAGCTATTAAT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDDNRAV*QIAAIN
Trigger: ATTAATAGCTGCGATTTGGCAAACAGCCCTGTTGTC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACAACAGGGAATCCATaGCTTGTTCCTCAAGAATGG +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTTGNP*LVPQEW
Trigger: CCATTCTTGAGGAACAAGCCATGGATTCCCTGTTGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCACACAGCATCTGTTTaGTTGAGGACTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDHTASV*LRTSLT
Trigger: AGTCAAAGAAGTCCTCAACCAAACAGATGCTGTGTG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCACTTCAGAGTGTTTTaGGCAGTATTCACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSHFRVF*AVFTLV
Trigger: AACCAGGGTGAATACTGCCCAAAACACTCTGAAGTG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAGCTATGAGGGGAACTaGCTGTGGTACTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSSYEGN*LWYFQN
Trigger: ATTTTGAAAGTACCACAGCCAGTTCCCCTCATAGCT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACAAATCGTTTTCCTTTaGATAAAGCTGTTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQQIVFL*IKLFSQ
Trigger: CTGGCTAAACAGCTTTATCCAAAGGAAAACGATTTG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTGAAGAGGCATATGTCTaGATGCATCCTGTACTGAAC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSEEAYV*MHPVLN
Trigger: GTTCAGTACAGGATGCATCCAGACATATGCCTCTTC...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAAATCCAATTGAACCTTaGATGCTATTTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: QPTPPLSRASSISIHHDQNPIEP*MLFALT
Trigger: TGTCAGAGCAAATAGCATCCAAGGTTCAATTGGATT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCGCACGGGAGGTTTGTaGCTGCTCAGAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALRTGGL*LLRAAT
Trigger: AGTGGCTGCTCTGAGCAGCCACAAACCTCCCGTGCG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATCTTCGTCGGCTGTTTaGAATTCACCGGACGGAGTG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFESSSAV*NSPDGV
Trigger: CACTCCGTCCGGTGAATTTCAAACAGCCGACGAAGA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTCAGATTCCTCAAACTaGAAAAGAGTCTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSDSSN*KRVSVF
Trigger: AAAGACAGAGACTCTTTTTCAGTTTGAGGAATCTGA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATCTTGGCTGTCCAAACTaGACTTTAGAACCTCACTAT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDLGCPN*TLEPHY
Trigger: ATAGTGAGGTTCTAAAGTTCAGTTTGGACAGCCAAG...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGAAGCGAGCCATCATTaGCTGGTCGTAGCCATACTC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEEASHH*LVVAIL
Trigger: GAGTATGGCTACGACCAGTCAATGATGGCTCGCTTC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATCCTGTACTGAACAGTaGGCTGTAGAATGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFESCTEQ*AVEWAA
Trigger: GGCTGCCCATTCTACAGCTCACTGTTCAGTACAGGA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTCTTTCAGGGTCCTTTaGAGTAACAGTAAGAGTAAT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSFRVL*SNSKSN
Trigger: ATTACTCTTACTGTTACTTCAAAGGACCCTGAAAGA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTCCTGCTCCCCTTCACTaGAAGCCCTGGCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIPAPLH*KPWPLS
Trigger: GGAGAGAGGCCAGGGCTTTCAGTGAAGGGGAGCAGG...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTATACACAATGCCCTCTaGAAGCTTTTGCAAATGACA +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSIHNAL*KLLQMT
Trigger: TGTCATTTGCAAAAGCTTTCAGAGGGCATTGTGTAT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAGAGCCAGAGACACCTaGCCCACCAGCACTAACTCA +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKRARDT*PTSTNS
Trigger: TGAGTTAGTGCTGGTGGGTCAGGTGTCTCTGGCTCT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCGATTCTTCCACAGCTaGCCCAGCGCTAATCTAGCA +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRRFFHS*PSANLA
Trigger: TGCTAGATTAGCGCTGGGTCAGCTGTGGAAGAATCG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAGAGGAAGCAGTGGCTaGCTCTGGGGACAAAGCACT +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKRGSSG*LWGQST
Trigger: AGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAACTGCATTCCGCTGTaGAAGGCCGTCACAGGACAC +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRINCIPL*KAVTGH
Trigger: GTGTCCTGTGACGGCCTTTCACAGCGGAATGCAGTT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATTGTATACGATCTGGCTaGAAGTCACCATATCATCCA +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDCIRSG*KSPYHP
Trigger: TGGATGATATGGTGACTTGCAGCCAGATCGTATACA...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAACGGCTTCCACCCATTaGTGGGAACTTACCCACAGC +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKTASTH*WELTHS
Trigger: GCTGTGGGTAAGTTCCCAGCAATGGGTGGAAGCCGT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAGGAGAGATTTTACATaGAGAAGTCAGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALRRDFT*RSQIHK
Trigger: TTTGTGGATCTGACTTCTGCATGTAAAATCTCTCCT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACTGGGACAACTCATATaGCTTACGAGGACCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLELGQLI*LTRTLF
Trigger: AAAAAGGGTCCTCGTAAGGCATATGAGTTGTCCCAG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCAGCTGCATTGGAAGGTaGACACACGAGGACACGGTT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRSCIGR*THEDTV
Trigger: AACCGTGTCCTCGTGTGTGCACCTTCCAATGCAGCT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCACTGTCGGAGGGAGCTaGTTAGGATCTCCTACTAGG +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRTVGGS*LGSPTR
Trigger: CCTAGTAGGAGATCCTAAGCAGCTCCCTCCGACAGT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCACTGTCTAGCTTGCTaGTGGGCAAACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALHCLAC*WANHPG
Trigger: CCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCATCCACTGTCTAGCTTaGTGCTGGGCAAACCACCCT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRIHCLA*CWANHP
Trigger: AGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGAT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGAACCACACTTCTCCTaGTCCCCTTCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQREPHFS*SPSLKA
Trigger: GGCTTTCAGTGAAGGGGAGCAGGAGAAGTGTGGTTC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGATACTCCAGTTCACTaGGTGGATATTTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDDTPVH*VDIWKT
Trigger: AGTTTTCCAAATATCCACGCAGTGAACTGGAGTATC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTGCTCATTCTGTACCTaGACAAATGGCCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSCSFCT*TNGLQK
Trigger: TTTCTGTAGGCCATTTGTCCAGGTACAGAATGAGCA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGGTGGAAGCACCACCTaGCGTACACCAACAACATGT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRGGSTT*RTPTTC
Trigger: ACATGTTGTTGGTGTACGCCAGGTGGTGCTTCCACC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACACCGGACGGAGTGTTaGAAGCATAGCGCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEHRTEC*KHSALG
Trigger: TCCTAAAGCGCTATGCTTCCAACACTCCGTCCGGTG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCTTGTTCCTCAAGAATaGTCAGCAACATGCAAATAC +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDLVPQE*SATCKY
Trigger: GTATTTGCATGTTGCTGACCATTCTTGAGGAACAAG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGTTAGGACAATAATCTaGGCAAATGGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDVRTII*ANGCSP
Trigger: TGGAGAACAGCCATTTGCCCAGATTATTGTCCTAAC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAAGGGGTCTTAGAAACTaGAACTTTCCTGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLERGLRN*NFPDGF
Trigger: GAACCCATCAGGAAAGTTCCAGTTTCTAAGACCCCT...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATGCAACCTTGCCTGTTaGAATTATTCGGAGACTGAG +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLECNLAC*NYSETE
Trigger: CTCAGTCTCCGAATAATTCCAACAGGCAAGGTTGCA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACTTTGCTTTCACCAAATaGAACTTTGCAACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDFAFTK*NFATLP
Trigger: AGGCAAGGTTGCAAAGTTCCATTTGGTGAAAGCAAA...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGAAATTCTCTCTATTTaGAGAGTTGAGCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALEILSI*RVEPFL
Trigger: CAAGAATGGCTCAACTCTCCAAATAGAGAGAATTTC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATTACCCAACAGAGACATaGCTTTCAACTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDYPTET*LSTSFV
Trigger: CACAAAGGAAGTTGAAAGCCATGTCTCTGTTGGGTA...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTACCCAACAGAGACATaGCTTTCAACTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSYPTET*LSTSFV
Trigger: CACAAAGGAAGTTGAAAGCCATGTCTCTGTTGGGTA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAGAAGTCCATAGGGTTTaGATTCAGAACAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEEVHRV*IQNSSS
Trigger: GCTAGAGCTGTTCTGAATCCAAACCCTATGGACTTC...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTCCTTCTGCCGACCCTaGAATGCATCCACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRSFCRP*NASTVS
Trigger: AGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTAGGCTCACAATATGCTaGGAGCATTTGAATGATAGC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSRLTIC*EHLNDS
Trigger: GCTATCATTCAAATGCTCCCAGCATATTGTGAGCCT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTGTACATTCCCTAAGTaGTCAGCACTACAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSCTFPK*SALQVS
Trigger: AGACACTTGTAGTGCTGACCACTTAGGGAATGTACA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTAAACCATCTCCTTTCTaGACTCCTGTATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSKPSPF*TPVSFL
Trigger: AAGGAAAGATACAGGAGTTCAGAAAGGAGATGGTTT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACTCAAACTCAAAACACTaGGAATCAGATTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDSNSKH*ESDSSN
Trigger: GTTTGAGGAATCTGATTCTCAGTGTTTTGAGTTTGA...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGCAGGGGGCCCACACTaGCCAAAGTTCAAAAACATT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEAGGPH*PKFKNI
Trigger: AATGTTTTTGAACTTTGGTCAGTGTGGGCCCCCTGC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGACAGGCACAGGTCTTaGGATGGACTGACAAAGACT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEDRHRS*DGLTKT
Trigger: AGTCTTTGTCAGTCCATCTCAAGACCTGTGCCTGTC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTGCTCTAACAATGGTTaGAAGGACCCGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALCSNNG*KDPPSS
Trigger: GGAGGAGGGCGGGTCCTTTCAACCATTGTTAGAGCA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATACACCAACAACATGTaGTCATTCTGTACCTGGACA +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEYTNNM*SFCTWT
Trigger: TGTCCAGGTACAGAATGAGCACATGTTGTTGGTGTA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACGAAGCTTCCAAACAATaGATATCTTTTCTAGACGTC +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDEASKQ*ISFLDV
Trigger: GACGTCTAGAAAAGATATGCATTGTTTGGAAGCTTC...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTCGGGAGGTTTGTGGCTaGTCAGAGCAGCCACTACAG +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIREVCG*SEQPLQ
Trigger: CTGTAGTGGCTGCTCTGAGCAGCCACAAACCTCCCG...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACAAGGCTCACAATATaGTGGGAGCATTTGAATGAT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTRLTI*WEHLND
Trigger: ATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACTCTACCATTAATTCTTaGAGAATCAGATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDSTINS*RIRSAE
Trigger: CTCAGCAGATCTGATTCTGCAAGAATTAATGGTAGA...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCAACTCAACAAACTGTaGACAATAAATCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDQLNKL*TINPRQ
Trigger: TTGCCTTGGATTTATTGTGCACAGTTTGTTGAGTTG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACAACAGAAATACTCCGTaGTCTTGTGTGTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDNRNTP*SCVFFN
Trigger: ATTGAAGAACACACAAGACCACGGAGTATTTCTGTT...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCAAATCGTTTTCCTTTaGATAAAGCTGTTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDQIVFL*IKLFSQ
Trigger: CTGGCTAAACAGCTTTATCCAAAGGAAAACGATTTG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATTCTCTTGAGTCTGGATaGAAAGGTAACACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDSLESG*KGNTQF
Trigger: AAACTGAGTGTTACCTTTCCATCCAGACTCAAGAGA...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGAATCAAGCAGATTTTaGCAACTGATGGTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDESSRF*QLMVSV
Trigger: AACACTCACCATCAGTTGCCAAAATCTGCTTGATTC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTGAATCAAGCAGATTTTaGCAACTGATGGTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSESSRF*QLMVSV
Trigger: AACACTCACCATCAGTTGCCAAAATCTGCTTGATTC...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGAATGCCCCTTCCTCTaGTTCTCTGTCAGTAGACGA +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRECPFL*FSVSRR
Trigger: TCGTCTACTGACAGAGAACCAGAGGAAGGGGCATTC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATCCTTCTGCCGACCCTaGAATGCATCCACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKSFCRP*NASTVS
Trigger: AGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAGTTCTGAACTCCTCTaGTTACGCTTCATTTTAAAT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSSELL*LRFILN
Trigger: ATTTAAAATGAAGCGTAACCAGAGGAGTTCAGAACT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACTGTCGCACACTGCATaGCCAAAGACAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFELSHTA*PKTNSP
Trigger: TGGAGAGTTTGTCTTTGGCCATGCAGTGTGCGACAG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAAGTGTCTGCTAAAATaGGCACTTCATCAAGATAAC +
Preference number: 4 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSKCLLK*ALHQDN
Trigger: GTTATCTTGATGAAGTGCCCATTTTAGCAGACACTT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCATATTGTTCAGTGTGTaGCGGCAAAATATGCATTTT +
Preference number: 4 (lower is better)
Translates to: KLSTPTEEAVADSGDKALILFSV*RQNMHF
Trigger: AAAATGCATATTTTGCCGCCACACACTGAACAATAT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACAAAGTCTTGCCCAGTaGTGTCAAACAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEQSLAQ*CQTVAS
Trigger: AGATGCCACTGTTTGACATCACTGGGCAAGACTTTG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATTTGTTGATAATGGTTTaGAATGCCACAATAGGATCC +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDLLIMV*NATIGS
Trigger: GGATCCTATTGTGGCATTTCAAACCATTATCAACAA...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAAAGTTTCTCAGCTGTTaGAGTTGGCTCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEKFLSC*SWLRTL
Trigger: CAGTGTCCTGAGCCAACTTCAACAGCTGAGAAACTT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTGGCTTCTGAGCTATaGGGGGAACTGGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLASEL*GELAVV
Trigger: TACCACAGCCAGTTCCCCTCATAGCTCAGAAGCCAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGTTCCAGGTGGTCCATaGATCAAGCAGATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRVPGGP*IKQILA
Trigger: TGCCAAAATCTGCTTGATTCATGGACCACCTGGAAC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGTTCCAGGTGGTCCATaGATCAAGCAGATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEVPGGP*IKQILA
Trigger: TGCCAAAATCTGCTTGATTCATGGACCACCTGGAAC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCATTGGAGTTTTCGTCTaGATGCCCCTTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRIGVFV*MPLPLV
Trigger: AACCAGAGGAAGGGGCATTCAGACGAAAACTCCAAT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTCCTGTACTGAACAGTaGGCTGTAGAATGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALSCTEQ*AVEWAA
Trigger: GGCTGCCCATTCTACAGCTCACTGTTCAGTACAGGA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTGAAACTTTTTATATCTaGATTGCACAAATCCCCACC +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSETFYI*IAQIPT
Trigger: GGTGGGGATTTGTGCAATTCAGATATAAAAAGTTTC...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAATGATTAACAACCTGTaGTATGTAAGCCACACCCAA +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEMINNL*YVSHTQ
Trigger: TTGGGTGTGGCTTACATAGCACAGGTTGTTAATCAT...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCGGCATAGAGCTCGCTaGCGGGAAAGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILRHRAR*RESSSS
Trigger: GCTGGATGAGCTTTCCCGGCAGCGAGCTCTATGCCG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTTTTTCATCTAATTCTTaGCTCTGTATTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSFSSNS*LCISRP
Trigger: TGGACGGGAAATACAGAGGCAAGAATTAGATGAAAA...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAACAAGGCTCACAATATaGTGGGAGCATTTGAATGAT +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLETRLTI*WEHLND
Trigger: ATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCTTCCACCCATTGCTaGGAACTTACCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIASTHC*ELTHSK
Trigger: TTTGCTGTGGGTAAGTTCCCAGCAATGGGTGGAAGC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATATATGACGTGCTGTTaGATCACCTCCACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKYMTCC*ITSTQR
Trigger: CCTCTGGGTGGAGGTGATCCAACAGCACGTCATATA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACATCAACAGCTGCATTaGAAGGTGCACACACGAGGA +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIHQQLH*KVHTRG
Trigger: TCCTCGTGTGTGCACCTTCCAATGCAGCTGTTGATG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCCTCTTCAGCAGTCGTaGGTCCTGAAGTTGGTCATG +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALPLQQS*VLKLVM
Trigger: CATGACCAACTTCAGGACCCACGACTGCTGAAGAGG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTTTTGGCCTGCCCCAGTaGTTCCCAAGCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILFGLPQ*FPSCLV
Trigger: CACCAGGCAGCTTGGGAACCACTGGGGCAGGCCAAA...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATGGTGAACATAGGAAATaGCTTTGGCAAATACTTGTA +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDGEHRK*LWQILV
Trigger: TACAAGTATTTGCCAAAGCCATTTCCTATGTTCACC...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAATAGGATCCATAAGTTaGCCCCAGACCTTAGATCCA +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEIGSIS*PQTLDP
Trigger: TGGATCTAAGGTCTGGGGTCAACTTATGGATCCTAT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGAAGCTTGGCACATTTaGCGACGGCTTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIEAWHI*RRLPPI
Trigger: AATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAACCCAGAGGGTCTTCTaGAGTGGAGACAATTACTTC +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKTQRVF*SGDNYF
Trigger: GAAGTAATTGTCTCCACTTCAGAAGACCCTCTGGGT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTGCCAGGAATCCAATTaGACCTTGGATGCTATTTGC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRCQESN*TLDAIC
Trigger: GCAAATAGCATCCAAGGTTCAATTGGATTCCTGGCA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTTCATCACATTTGCTCTaGCACGTGGAAGCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRISSHLL*HVEASG
Trigger: TCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGA...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATCATCACATTTGCTCTaGCACGTGGAAGCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKSSHLL*HVEASG
Trigger: TCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTAGAGCCAGAGACACCTaGCCCACCAGCACTAACTCA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIRARDT*PTSTNS
Trigger: TGAGTTAGTGCTGGTGGGTCAGGTGTCTCTGGCTCT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAACTTGGGTTCTGGGCTaGAAAAAGGCGAATGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKTWVLG*KKANGS
Trigger: TGAACCATTCGCCTTTTTTCAGCCCAGAACCCAAGT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436441.5
CDS-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATATCCCAGAATCGCTTaGAAAGAGACTGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKYPRIA*KETAAQ
Trigger: TTGGGCAGCAGTCTCTTTGCAAGCGATTCTGGGATA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTCTCAAAGGTTTAGATaGAGGAGGAGGCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALSQRFR*RRRQAR
Trigger: CCTGGCTTGCCTCCTCCTGCATCTAAACCTTTGAGA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTAGCTGCATTGGAAGGTaGACACACGAGGACACGGTT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRISCIGR*THEDTV
Trigger: AACCGTGTCCTCGTGTGTGCACCTTCCAATGCAGCT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAATAACACAATCCTTCTaGCGACCCTGGAATGCATCC +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIITQSF*RPWNAS
Trigger: GGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTAT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCACTGTCTAGCTTGCTaGTGGGCAAACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILHCLAC*WANHPG
Trigger: CCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACCGGGTCATCACATTTaGTCTGACACGTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKPGHHI*SDTWKP
Trigger: AGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTCAGTGGTTCCCAAGCTaGCTGGTGATCAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIQWFPS*LVIRIP
Trigger: AGGGATTCTGATCACCAGGCAGCTTGGGAACCACTG...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAACTCCGGTTCTAACTTaGTCCTTACAGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKTPVLT*SLQSCS
Trigger: GGAACAGCTCTGTAAGGACCAAGTTAGAACCGGAGT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCTGACGAAATTTCTTTaGCGGCACTATAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRLTKFL*RHYSRS
Trigger: ACTCCTGCTATAGTGCCGCCAAAGAAATTTCGTCAG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGGGGCTCGAGGGTTGTaGATCCCAAAGGAATATTCC +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKGARGL*IPKEYS
Trigger: GGAATATTCCTTTGGGATCCACAACCCTCGAGCCCC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGATGGTCCCACGAGCTaGTCATCTTCAGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRDGPTS*SSSVYN
Trigger: ATTGTAAACTGAAGATGACCAGCTCGTGGGACCATC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACCAAAATATTCTATTTaGCCTGCCCCAGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKPKYSI*PAPVVP
Trigger: GGGAACCACTGGGGCAGGCCAAATAGAATATTTTGG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATAGTTCTGAACTCCTCTaGTTACGCTTCATTTTAAAT +
Preference number: 4 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDSSELL*LRFILN
Trigger: ATTTAAAATGAAGCGTAACCAGAGGAGTTCAGAACT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCTGTCGCACACTGCATaGCCAAAGACAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALLSHTA*PKTNSP
Trigger: TGGAGAGTTTGTCTTTGGCCATGCAGTGTGCGACAG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTTGGCCTACAGAAAAGTaGTCGTCTCAGCTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIWPTEK*SSQLGL
Trigger: TAAGCCCAGCTGAGACGATCACTTTTCTGTAGGCCA...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTAGCTGCGATGAGTTCTaGGGTGAATCGGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSISCDEF*GESDGN
Trigger: GTTCCCATCCGATTCACCTCAGAACTCATCGCAGCT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATTTGTGATTTGGGTCTaGTCTGCCTTTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEFVIWV*SAFASE
Trigger: TTCAGATGCAAAGGCAGATCAGACCCAAATCACAAA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCATTCTGTGCTGTATGTaGCCCTGCTCTTTTAACATC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRILCCM*PCSFNI
Trigger: GATGTTAAAAGAGCAGGGTCACATACAGCACAGAAT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTTGTCCAAATCCTTCTaGATCATCGTCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALLSKSF*IIVFWA
Trigger: GGCCCAGAAGACGATGATTCAGAAGGATTTGGACAA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACAGGTAGATGATTTCTaGAGATCACAGGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEQVDDF*RSQEVY
Trigger: GTAGACTTCCTGTGATCTTCAGAAATCATCTACCTG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTAGAGGAAGCAGTGGCTaGCTCTGGGGACAAAGCACT +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILRGSSG*LWGQST
Trigger: AGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGTTTCAAAAGTAATGTaGGGTACAACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEVSKVM*GTTAFR
Trigger: GCGGAATGCAGTTGTACCTCACATTACTTTTGAAAC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAATGCTGGTTTTCCTTaGGAGCCCAGTGTAGATACT +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKNAGFP*EPSVDT
Trigger: AGTATCTACACTGGGCTCTCAAGGAAAACCAGCATT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436441.5
CDS-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATTAACTGTTGAAACGTaGTGCTCTGGATGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKLTVET*CSGCSL
Trigger: GAGGGAACATCCAGAGCAGCACGTTTCAACAGTTAA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACTGGTTCAGAAGGCATaGATTTTATTAACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSVRDILTPTFLPCLPLELVQKA*ILLTVF
Trigger: GAAAACAGTTAATAAAATGCATGCCTTCTGAACCAG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCCTGTTCAACAACGCTaGGCTGACAGCCACATCAGG +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILPVQQR*ADSHIR
Trigger: CCTGATGTGGCTGTCAGCGCAGCGTTGTTGAACAGG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGACAACAGGGCTGTTTaGCAAATCGCAGCTATTAAT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEDNRAV*QIAAIN
Trigger: ATTAATAGCTGCGATTTGGCAAACAGCCCTGTTGTC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACCTGAAAGGAGCAATTaGCTTGTTCCATCCGACAAA +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIPERSN*LVPSDK
Trigger: TTTGTCGGATGGAACAAGCCAATTGCTCCTTTCAGG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAGATCCATGAGGGACTaGACAAAAGGGATGAACCAT +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIRSMRD*TKGMNH
Trigger: ATGGTTCATCCCTTTTGTCCAGTCCCTCATGGATCT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCAGCATCATCAGTTGCTaGAGACCCATGTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRSIISC*RPMFCF
Trigger: AAAGCAAAACATGGGTCTCCAGCAACTGATGATGCT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTACAGCTCTAGCCAGTTaGTTCCGACTACCCAACAGA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRITALAS*FRLPNR
Trigger: TCTGTTGGGTAGTCGGAACCAACTGGCTAGAGCTGT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGAAGAGGCATATGTCTaGATGCATCCTGTACTGAAC +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIEEAYV*MHPVLN
Trigger: GTTCAGTACAGGATGCATCCAGACATATGCCTCTTC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCACAAGCTTATCTAGATaGTCCCACGAGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALTSLSR*SHELVI
Trigger: GATGACCAGCTCGTGGGACCATCTAGATAAGCTTGT...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAAGGCTCACAATATGCTaGGAGCATTTGAATGATAGC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFERLTIC*EHLNDS
Trigger: GCTATCATTCAAATGCTCCCAGCATATTGTGAGCCT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTGTTTATCAAACACCTaGAAGGAGCAATTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRCLSNT*KEQLAC
Trigger: ACAAGCCAATTGCTCCTTTCAGGTGTTTGATAAACA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACTGACAGACAGGTTCTaGGGAGAAATTAATTTAGTC +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFELTDRF*GEINLV
Trigger: GACTAAATTAATTTCTCCTCAGAACCTGTCTGTCAG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGCTGCCATCTCTATATaGCGTGCTGTTGGATCACCT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIAAISI*RAVGSP
Trigger: AGGTGATCCAACAGCACGTCATATAGAGATGGCAGC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACATAATTGTGAAATCTaGCAGGCACAGGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKHNCEI*QAQVLR
Trigger: TCTCAAGACCTGTGCCTGTCAGATTTCACAATTATG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAGGACACGGTTTTGTTTaGTTTTGGCATTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEGHGFV*FWHWSF
Trigger: AAAACTCCAATGCCAAAATCAAACAAAACCGTGTCC...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGGATGCATCCTGTACTaGACAGTGAGCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIGCILY*TVSCRM
Trigger: CATTCTACAGCTCACTGTTCAGTACAGGATGCATCC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATTGTCCAAATCCTTCTaGATCATCGTCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLSKSF*IIVFWA
Trigger: GGCCCAGAAGACGATGATTCAGAAGGATTTGGACAA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTCAGAATCAGATCTGCTaGGTGGTGAACCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIQNQIC*VVNQQV
Trigger: CACCTGTTGGTTCACCACTCAGCAGATCTGATTCTG...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCTTCCTCTGCATCACTaGTGGAGTCAGGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILLPLHH*WSQALL
Trigger: AAGGAGAGCCTGACTCCAGCAGTGATGCAGAGGAAG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAGTGACATTCAATCTCTaGAAACTTGCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKVTFNL*KLARNP
Trigger: TGGATTCCTGGCAAGTTTGCAGAGATTGAATGTCAC...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTATATGCCCAGACTCTaGCCCCAAAAGAACATTTCG +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALYMPRL*PQKNIS
Trigger: CGAAATGTTCTTTTGGGGCCAGAGTCTGGGCATATA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCAGTGATGTCAAACAGTaGCATCTCTCCATTATTGTC +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRSDVKQ*HLSIIV
Trigger: GACAATAATGGAGAGATGCCACTGTTTGACATCACT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGAGGGTCTTCTGAAGTaGAGACAATTACTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQREGLLK*RQLLHL
Trigger: CAAATGAAGTAATTGTCTCCACTTCAGAAGACCCTC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGAGGGGAACTGGCTGTaGTACTTTCAAAATCGACTG +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIEGNWL*YFQNRL
Trigger: CAGTCGATTTTGAAAGTACCACAGCCAGTTCCCCTC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGCACAGGTCTTGAGATaGACTGACAAAGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKAQVLR*TDKDLQ
Trigger: CTGCAAGTCTTTGTCAGTCCATCTCAAGACCTGTGC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGTGCAGCAGATGATATaGGACTCTAAGATGATGATA +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRVQQMI*DSKMMI
Trigger: TATCATCATCTTAGAGTCCCATATCATCTGCTGCAC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCAGCTTATTGCAGCGATaGATGAGTGGAGTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALSLLQR*MSGVRV
Trigger: GACTCTTACTCCACTCATCCATCGCTGCAATAAGCT...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGTTTACAATATGCTGTaGCTGCTGGCCCATGTCACT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIVYNML*LLAHVT
Trigger: AGTGACATGGGCCAGCAGCCACAGCATATTGTAAAC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATGTACATTCCCTAAGTaGTCAGCACTACAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKCTFPK*SALQVS
Trigger: AGACACTTGTAGTGCTGACCACTTAGGGAATGTACA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATTTCTTTTAATGCCATaGCAAAGACGAAGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEFLLMP*QRRSEE
Trigger: CTCTTCGCTTCGTCTTTGCCATGGCATTAAAAGAAA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAAGGTCTCTGTCTATCTaGGAATCCGTTAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKRSLSI*ESVKVS
Trigger: TGACACCTTAACGGATTCTCAGATAGACAGAGACCT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTCAAAGATTCCAACTaGGGCCGACTTACAGAATCT +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLKDSN*GRLTES
Trigger: AGATTCTGTAAGTCGGCCTCAGTTGGAATCTTTGAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGGACACGGTTTTGTTTaGTTTTGGCATTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIGHGFV*FWHWSF
Trigger: AAAACTCCAATGCCAAAATCAAACAAAACCGTGTCC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGGATGCATCCTGTACTaGACAGTGAGCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIGCILY*TVSCRM
Trigger: CATTCTACAGCTCACTGTTCAGTACAGGATGCATCC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTTCAAATGTCCGAGGATaGAGAGGCTGTACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILSNVRG*RGCTWL
Trigger: GAGCCAAGTACAGCCTCTTCATCCTCGGACATTTGA...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTCTTTCAGGGTCCTTTaGAGTAACAGTAAGAGTAAT +
Preference number: 4 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRSFRVL*SNSKSN
Trigger: ATTACTCTTACTGTTACTTCAAAGGACCCTGAAAGA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAACCAACTGGAACGAGTaGAGTTTCAAAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKTNWNE*SFKSNV
Trigger: CACATTACTTTTGAAACTTCACTCGTTCCAGTTGGT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACACACTATCATCATCTaGTTCCCTCTCCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKHTIII*FPLHSV
Trigger: CACACTATGGAGAGGGAAGCAGATGATGATAGTGTG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTCCTTCTTTCAAAGCTaGCATCTCTATATGACGTGC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALSFFQS*HLYMTC
Trigger: GCACGTCATATAGAGATGGCAGCTTTGAAAGAAGGA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGAGTTTTCGTCTGAATaGCCCTTCCTCTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIEFSSE*PFLWFS
Trigger: AGAGAACCAGAGGAAGGGGCATTCAGACGAAAACTC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAACCTTGGATGCTATTTaGTCTGACACACGTAACAAT +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRITLDAI*SDTRNN
Trigger: ATTGTTACGTGTGTCAGAGCAAATAGCATCCAAGGT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATCTACCATTAATTCTTaGAGAATCAGATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFESTINS*RIRSAE
Trigger: CTCAGCAGATCTGATTCTGCAAGAATTAATGGTAGA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAAACCTCATGCAAGAATaGCAATTCATCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFENLMQE*QFISCF
Trigger: AAAGCAAGAGATGAATTGCCATTCTTGCATGAGGTT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAATAATCTGGGCAAATaGCTGTTCTCCATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRINNLGK*LFSIQN
Trigger: ATTCTGGATGGAGAACAGCCATTTGCCCAGATTATT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCGTTTTCTGTTACTGTTaGCAAGTACCTCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALVFCYC*QVPQFL
Trigger: GAGGAACTGAGGTACTTGCCAACAGTAACAGAAAAC...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCACTACAGAATCACACTaGTTCAAAGGGCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALTTESH*FKGQAS
Trigger: TGATGCTTGCCCTTTGAACCAGTGTGATTCTGTAGT...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACAAGTTCGTTTAAATTaGCCGGAAAGTTCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIQVRLN*PESSLE
Trigger: CTCAAGAGAACTTTCCGGCCAATTTAAACGAACTTG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTACAGCTCTAGCCAGTTaGTTCCGACTACCCAACAGA +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILTALAS*FRLPNR
Trigger: TCTGTTGGGTAGTCGGAACCAACTGGCTAGAGCTGT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGCAGCGATGGATGAGTaGAGTAAGAGTCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIAAMDE*SKSLNF
Trigger: GAAATTGAGACTCTTACTCCACTCATCCATCGCTGC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGAGTCAGAGGGTGTGTaGTATAGAGAAGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIESEGV*YREAAT
Trigger: TGTTGCTGCTTCTCTATACCACACACCCTCTGACTC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTACAAGCTTATCTAGATaGTCCCACGAGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSITSLSR*SHELVI
Trigger: GATGACCAGCTCGTGGGACCATCTAGATAAGCTTGT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACATAGGAAATGGCTTTaGCAAATACTTGTACCAACT +
Preference number: 4 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEHRKWL*QILVPT
Trigger: AGTTGGTACAAGTATTTGCCAAAGCCATTTCCTATG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGGAGCAATTTCCAGATaGTTTCTCAGAACTCCGTGT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIGAISR*FLRTPC
Trigger: ACACGGAGTTCTGAGAAATCATCTGGAAATTGCTCC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTTGGCAATTCATCTCTTaGTTTGTGGTACTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIWQFIS*FVVLSH
Trigger: GTGGCTGAGTACCACAAAGCAAGAGATGAATTGCCA...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACTCTCTATTGTAGCTTaGGTTGTTGATAATGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKLSIVA*VVDNGL
Trigger: CAAACCATTATCAACAACGCAAGCTACAATAGAGAG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATATACATCTTCATCTGCTaGTTTCACTTCAGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIYIFIC*FHFRVF
Trigger: AAACACTCTGAAGTGAAAGCAGCAGATGAAGATGTA...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGTTGAGCCATTCTTGTaGCACTGTTTCAAAAGTATT +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIVEPFL*HCFKSI
Trigger: AATACTTTTGAAACAGTGGCACAAGAATGGCTCAAC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTATAACACAATCCTTCTaGCGACCCTGGAATGCATCC +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILITQSF*RPWNAS
Trigger: GGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTAT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTAATGAGATATGGGGCTaGACAGCATTCACTACAGAT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRINEIWG*TAFTTD
Trigger: ATCTGTAGTGAATGCTGTGCAGCCCCATATCTCATT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTCTCCTAGGAAGAAGTTaGATCAGGGTCCTCAAATGT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSILLGRS*IRVLKC
Trigger: ACATTTGAGGACCCTGATGCAACTTCTTCCTAGGAG...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436441.5
CDS-3UTR CCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTTCATCTCTTGCTTTGTaGTACTCAGCCACACACTCC +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILSSLAL*YSATHS
Trigger: GGAGTGTGTGGCTGAGTACCACAAAGCAAGAGATGA...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGAAATTCTCTCTATTTaGAGAGTTGAGCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIEILSI*RVEPFL
Trigger: CAAGAATGGCTCAACTCTCCAAATAGAGAGAATTTC...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGGATATTTGGAAAACTaGACAAAATCAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIGYLEN*TKSGSP
Trigger: TGGGCTGCCTGATTTTGTCCAGTTTTCCAAATATCC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGGATATTTGGAAAACTaGACAAAATCAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKGYLEN*TKSGSP
Trigger: TGGGCTGCCTGATTTTGTCCAGTTTTCCAAATATCC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAAAGTGTCTGCTAAAATaGGCACTTCATCAAGATAAC +
Preference number: 4 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIKCLLK*ALHQDN
Trigger: GTTATCTTGATGAAGTGCCCATTTTAGCAGACACTT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAAGTATCATACATGTGTaGGGGCAGAAGAATCAGTTT +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKSIIHV*GQKNQF
Trigger: AAACTGATTCTTCTGCCCTCACACATGTATGATACT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTATCATTTTGTTTGTCTaGGCCCAACAACAGGGAATC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIIILFV*AQQQGI
Trigger: GATTCCCTGTTGTTGGGCTCAGACAAACAAAATGAT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATCCCTCTCCATAGTGTaGAGTATCGATTGCATAAAA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKSLSIV*SIDCIK
Trigger: TTTTATGCAATCGATACTTCACACTATGGAGAGGGA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTTTCTGGACCATTTCTTaGAGTACAGTCCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIFWTIS*STVLWC
Trigger: ACACCAAAGGACTGTACTTCAAGAAATGGTCCAGAA...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTCACCATCTTGAACTaGATTATTATCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLTILN*IIIVWM
Trigger: CATCCAGACGATAATAATTCAGTTCAAGATGGTGAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGTTTCAAAAGTAATGTaGGGTACAACTGCATTCCGC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIVSKVM*GTTAFR
Trigger: GCGGAATGCAGTTGTACCTCACATTACTTTTGAAAC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTACCAACTGGAACGAGTaGAGTTTCAAAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRITNWNE*SFKSNV
Trigger: CACATTACTTTTGAAACTTCACTCGTTCCAGTTGGT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGAATGGTCAGCAACATaGAAATACCTAACCAATAGC +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIEWSAT*KYLTNS
Trigger: GCTATTGGTTAGGTATTTGCATGTTGCTGACCATTC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTTGGAGACCCATGTTTTaGTTTTATGGTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIWRPMF*FYGFWF
Trigger: GAACCAGAAACCATAAAAGCAAAACATGGGTCTCCA...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGTAGCCATACTCCTGTaGTTTCATAGAGATGACTGT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIVAILL*FHRDDC
Trigger: ACAGTCATCTCTATGAAAGCACAGGAGTATGGCTAC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGTGACATTCAATCTCTaGAAACTTGCCAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIVTFNL*KLARNP
Trigger: TGGATTCCTGGCAAGTTTGCAGAGATTGAATGTCAC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTAATACCCTGGGCCAATaGACTCTATCTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRINTLGQ*TLSKNA
Trigger: TGCATTTTTAGATAGAGTGCATTGGCCCAGGGTATT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACAAGTTCGTTTAAATTaGCCGGAAAGTTCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKQVRLN*PESSLE
Trigger: CTCAAGAGAACTTTCCGGCCAATTTAAACGAACTTG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCATTCTGTGGTTTACTTaGCTGTCCAAACTGAACTTT +
Preference number: 4 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALILWFT*LSKLNF
Trigger: AAAGTTCAGTTTGGACAGCCAAGTAAACCACAGAAT...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGTGCAGCAGATGATATaGGACTCTAAGATGATGATA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKVQQMI*DSKMMI
Trigger: TATCATCATCTTAGAGTCCCATATCATCTGCTGCAC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTTTTCTTTTAATGCCATaGCAAAGACGAAGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIFLLMP*QRRSEE
Trigger: CTCTTCGCTTCGTCTTTGCCATGGCATTAAAAGAAA...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
3UTR CAA 72 bp ACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTaGAATGATAGCTCAAGAATTATTCTTTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: TSHTRLTICWEH*NDSSRIILSLH
Trigger: ATGGAGTGAAAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTACTTCAGAGTACAGATaGTTAACAACCTGTGCTATG +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSITSEYR*LTTCAM
Trigger: CATAGCACAGGTTGTTAATCATCTGTACTCTGAAGT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTAGTCAACAAACGTGTTaGTACTATTATTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRISQQTC*YYYSSV
Trigger: GACAGAGGAATAATAGTATCAACACGTTTGTTGACT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCTTACTATTAACTGTTaGAACGTGCTGCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILLTINC*NVLLWM
Trigger: CATCCAGAGCAGCACGTTTCAACAGTTAATAGTAAG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATTATTATCGTCTGGATaGTCTTGCCAAACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLLSSG*SCQTEN
Trigger: GTTTTCAGTTTGGCAAGATCATCCAGACGATAATAA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTATTATCCCGTCTTTCTaGACCATCTCCAACATCAAA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIIIPSF*TISNIK
Trigger: TTTGATGTTGGAGATGGTTCAGAAAGACGGGATAAT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTATACACAATGCCCTCTaGAAGCTTTTGCAAATGACA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIIHNAL*KLLQMT
Trigger: TGTCATTTGCAAAAGCTTTCAGAGGGCATTGTGTAT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATTAGATGGCATGGAATaGAATGACAGTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLDGME*NDSEDI
Trigger: GATATCTTCACTGTCATTGCATTCCATGCCATCTAA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATGTACTTACACTTTGTaGCACTCAAAGATTCCAACT +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKCTYTL*HSKIPT
Trigger: AGTTGGAATCTTTGAGTGGCACAAAGTGTAAGTACA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAAAATACATCTTCATCTaGTGCTTTCACTTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKKYIFI*CFHFRV
Trigger: CACTCTGAAGTGAAAGCAGCAGATGAAGATGTATTT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR GCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTTTTTCATCTAATTCTTaGCTCTGTATTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIFSSNS*LCISRP
Trigger: TGGACGGGAAATACAGAGGCAAGAATTAGATGAAAA...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACAACTCAACAAACTGTaGACAATAAATCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKQLNKL*TINPRQ
Trigger: TTGCCTTGGATTTATTGTGCACAGTTTGTTGAGTTG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATTCTTTAGAAAATGTTaGGCTGGAAGCTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKFFRKC*AGSFQT
Trigger: TGTTTGGAAGCTTCCAGCCCAACATTTTCTAAAGAA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTAGGATCTTCAGCCATTaGTTTTTCAGATCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIRIFSH*FFRSFS
Trigger: AGAAAACGATCTGAAAAACCAATGGCTGAAGATCCT...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATTATTAGTATCAGACTaGCCCTCATTTCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLLVSD*PSFLTE
Trigger: TTCTGTCAGAAATGAGGGCCAGTCTGATACTAATAA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTTCTGAATACGTGAATTaGGAGTTGAAGTCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRISEYVN*ELKSFY
Trigger: ATAGAAGGACTTCAACTCCCAATTCACGTATTCAGA...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTTCTCTTGAGTCTGGATaGAAAGGTAACACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSISLESG*KGNTQF
Trigger: AAACTGAGTGTTACCTTTCCATCCAGACTCAAGAGA...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGGTGAACATAGGAAATaGCTTTGGCAAATACTTGTA +
Preference number: 4 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIGEHRK*LWQILV
Trigger: TACAAGTATTTGCCAAAGCCATTTCCTATGTTCACC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGTCCTTTGGTGTATATaGAGAGATCTCTTTTACAGA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIVLWCI*RDLFYR
Trigger: TCTGTAAAAGAGATCTCTTCATATACACCAAAGGAC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR TCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTAACATTTCCAGTCTCTaGCTTCAAGGACATTATTAC +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSINISSL*LQGHYY
Trigger: GTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTGATACTCCAGTTCACTaGGTGGATATTTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILDTPVH*VDIWKT
Trigger: AGTTTTCCAAATATCCACGCAGTGAACTGGAGTATC...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGCCGAACCATTTCATTaGGATGGACTAAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIAEPFH*DGLKTN
Trigger: ATTTGTTTTTAGTCCATCCCAATGAAATGGTTCGGC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAAATCTTCATTCGATGTaGACACTTTTTCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKNLHSM*TLFPKH
Trigger: ATGCTTTGGAAAAAGTGTCCACATCGAATGAAGATT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTAATCCAATTGAACCTTaGATGCTATTTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSINPIEP*MLFALT
Trigger: TGTCAGAGCAAATAGCATCCAAGGTTCAATTGGATT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAACCTCTAATAGTAGCTaGAAACACCTATCAGATATT +
Preference number: 4 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKTSNSS*KHLSDI
Trigger: AATATCTGATAGGTGTTTCCAGCTACTATTAGAGGT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR TCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTTATGCTGGGAGCATTTaGATGATAGCTCAAGAATTA +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILYAGSI*MIAQEL
Trigger: TAATTCTTGAGCTATCATTCAAATGCTCCCAGCATA...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR GCA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGATAATGGTTTGAAATaGCACAATAGGATCCATAAG +
Preference number: 4 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIDNGLK*HNRIHK
Trigger: CTTATGGATCCTATTGTGGCATTTCAAACCATTATC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTTCATTGCTGTTCCTTTaGAGCAATTTCCAGATGATT +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILSLLFL*SNFQMI
Trigger: AATCATCTGGAAATTGCTCCAAAGGAACAGCAATGA...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTATTCTGTGGTTTACTTaGCTGTCCAAACTGAACTTT +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILILWFT*LSKLNF
Trigger: AAAGTTCAGTTTGGACAGCCAAGTAAACCACAGAAT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CCA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCATAGGAAATGGCTTTaGCAAATACTTGTACCAACT +
Preference number: 4 (lower is better)
Translates to: TRLTICWEHLNDSSRIILHRKWL*QILVPT
Trigger: AGTTGGTACAAGTATTTGCCAAAGCCATTTCCTATG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CCA 90 bp GCCTCGGGACTGGCAGCTGGAGGTTCGCCCCGCACGGGAGGTTTGTaGCTGCTCAGAGCAGCCACTACAGCAGCGGGCTGCTGTATATGG +
Preference number: 5 (lower is better)
Translates to: ASGLAAGGSPRTGGL*LLRAATTAAGCCIW
Trigger: CCATATACAGCAGCCCGCTGCTGTAGTGGCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 90 bp CGGGACTGGCAGCTGGAGGTTCGCCCCGCACGGGAGGTTTGTGGCTaGTCAGAGCAGCCACTACAGCAGCGGGCTGCTGTATATGGCTCA +
Preference number: 5 (lower is better)
Translates to: RDWQLEVRPAREVCG*SEQPLQQRAAVYGS
Trigger: TGAGCCATATACAGCAGCCCGCTGCTGTAGTGGCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS TCA 90 bp GCAGCCACTACAGCAGCGGGCTGCTGTATATGGCTCAGGTCCTGGTaGACGACAGGGAAGCCCGGCTCGCCCGTAGGAGGTGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: AATTAAGCCIWLRSW*TTGKPGSPVGGVAP
Trigger: TGGAGCAACACCTCCTACGGGCGAGCCGGGCTTCCCTGTCGTTCACCAGGACCTGAGCCATATACAGCAGCCCGCTGCTGTAGTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 90 bp GTCCTGGTGAACGACAGGGAAGCCCGGCTCGCCCGTAGGAGGTGTTaGTCCAGGATGCTGGGGGCTCGAGGGTTGTGGATCCCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: VLVNDREARLARRRC*SRMLGARGLWIPKE
Trigger: TTCCTTTGGGATCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAACACCTCCTACGGGCGAGCCGGGCTTCCCTGTCGTTCACCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACCCCGCACGGGAGGTTaGTGGCTGCTCAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQPRTGG*WLLRAA
Trigger: GGCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CCA 90 bp GTCATCACATTTGCTCTGACACGTGGAAGCCTCGGGACTGGCAGCTaGAGGTTCGCCCCGCACGGGAGGTTTGTGGCTGCTCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VITFALTRGSLGTGS*RFAPHGRFVAAQSS
Trigger: GCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 90 bp CTTCCGGGTCATCACATTTGCTCTGACACGTGGAAGCCTCGGGACTaGCAGCTGGAGGTTCGCCCCGCACGGGAGGTTTGTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LPGHHICSDTWKPRD*QLEVRPAREVCGCS
Trigger: TGAGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 90 bp TGTGACAGAGCTCCTCTTCCGGGTCATCACATTTGCTCTGACACGTaGAAGCCTCGGGACTGGCAGCTGGAGGTTCGCCCCGCACGGGAG +
Preference number: 5 (lower is better)
Translates to: CDRAPLPGHHICSDT*KPRDWQLEVRPARE
Trigger: CTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGGAAGAGGAGCTCTGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACAGCCCACCCCTCCCTaGTCCCGAGCTTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQQPTPP*SRASSI
Trigger: GATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS GCA 90 bp ACGACAGGGAAGCCCGGCTCGCCCGTAGGAGGTGTTGCTCCAGGATaGTGGGGGCTCGAGGGTTGTGGATCCCAAAGGAATATTCCTCCT +
Preference number: 5 (lower is better)
Translates to: TTGKPGSPVGGVAPG*WGLEGCGSQRNIPP
Trigger: AGGAGGAATATTCCTTTGGGATCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAACACCTCCTACGGGCGAGCCGGGCTTCCCTGTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 90 bp TGGCCTCTCTCCTGTGACAGAGCTCCTCTTCCGGGTCATCACATTTaGTCTGACACGTGGAAGCCTCGGGACTGGCAGCTGGAGGTTCGC +
Preference number: 5 (lower is better)
Translates to: WPLSCDRAPLPGHHI*SDTWKPRDWQLEVR
Trigger: GCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGGAAGAGGAGCTCTGTCACAGGAGAGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 90 bp ACAGGGAAGCCCGGCTCGCCCGTAGGAGGTGTTGCTCCAGGATGCTaGGGGCTCGAGGGTTGTGGATCCCAAAGGAATATTCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TGKPGSPVGGVAPGC*GLEGCGSQRNIPPL
Trigger: CAAAGGAGGAATATTCCTTTGGGATCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAACACCTCCTACGGGCGAGCCGGGCTTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGAAGGGGACACCCCCTaGCCCACGGAAAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALEGDTP*PTESRL
Trigger: GAGTCTGCTTTCCGTGGGCAAGGGGGTGTCCCCTTC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCCCCGCACGGGAGGTTaGTGGCTGCTCAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSPRTGG*WLLRAA
Trigger: GGCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAATCCACTGTCTAGCTaGCTGCTGGGCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALNPLSS*LLGKPP
Trigger: GGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGGAAGCTTGGCACATTaGACGACGGCTTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSGSLAH*TTASTH
Trigger: ATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTCC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAATGAAGAGGCTGTACTaGGCTCGTGTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQMKRLY*ARVMVT
Trigger: TGTCACCATCACACGAGCCAAGTACAGCCTCTTCAT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACCCAAAATATTCTATTaGGCCTGCCCCAGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQPKIFY*ACPSGS
Trigger: GGAACCACTGGGGCAGGCCAAATAGAATATTTTGGG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAATTCAGGAGTATTCAGTaGACCGTCTGGACACCAGTG +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQFRSIQ*TVWTPV
Trigger: CACTGGTGTCCAGACGGTCAACTGAATACTCCTGAA...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp GCTGGGGGCTCGAGGGTTGTGGATCCCAAAGGAATATTCCTCCTTTaGCCTCAATGCCCATCCTCTTCAGCAGTCGTGGGTCCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: AGGSRVVDPKGIFLL*PQCPSSSAVVGPEV
Trigger: AACTTCAGGACCCACGACTGCTGAAGAGGATGGGCATTGAGGTCAAAGGAGGAATATTCCTTTGGGATCCACAACCCTCGAGCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTTATCCCAGAATCGCTaGCAAAGAGACTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLSQNR*QRDCCP
Trigger: TGGGCAGCAGTCTCTTTGCAAGCGATTCTGGGATAA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTCTCAGCTGTTGAAGTaGGCTCAGGACACTGACGAA +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALSQLLK*AQDTDE
Trigger: TTCGTCAGTGTCCTGAGCCAACTTCAACAGCTGAGA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGGCCGGAAAGTTCTCTaGAGTCTGGATGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALGRKVL*SLDGKV
Trigger: TACCTTTCCATCCAGACTCAAGAGAACTTTCCGGCC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAACAGCTCTAGCCAGTaGGTTCCGACTACCCAACAG +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSNSSSQ*VPTTQQ
Trigger: CTGTTGGGTAGTCGGAACCAACTGGCTAGAGCTGTT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGTAGTAAACCACCACTaGTGCTCAACGTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALVVNHH*CSTCSR
Trigger: TCTGCTGCACGTTGAGCACAAGTGGTGGTTTACTAC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAGAAGCGAGCCATCATaGACTGGTCGTAGCCATACT +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALRSEPS*TGRSHT
Trigger: AGTATGGCTACGACCAGTCAATGATGGCTCGCTTCT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAACAGCCCACCCCTCCCTaGTCCCGAGCTTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEQPTPP*SRASSI
Trigger: GATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp CCAGGAAGTAACCTGTCTACCCAGGAGCCACACAGCACAAGTCTATaGAAGCCAGCAGCATCCCAGCTTCCTCGTGCCGTATCACCAATT +
Preference number: 5 (lower is better)
Translates to: PGSNLSTQEPHSTSL*KPAASQLPRAVSPI
Trigger: AATTGGTGATACGGCACGAGGAAGCTGGGATGCTGCTGGCTTTCATAGACTTGTGCTGTGTGGCTCCTGGGTAGACAGGTTACTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS CCA 90 bp TGGAGTCAGAGGGTGTGTGGTATAGAGAAGCAGCAACAGATGTCTTaGCAAATCCACTGTCTAGCTTGCTGCTGGGCAAACCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: WSQRVCGIEKQQQMS*QIHCLACCWANHPG
Trigger: CCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATTTGCCAAGACATCTGTTGCTGCTTCTCTATACCACACACCCTCTGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGCTCCTAGGAAGAAGTaGCATCAGGGTCCTCAAATG +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSAPRKK*HQGPQM
Trigger: CATTTGAGGACCCTGATGCAACTTCTTCCTAGGAGC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436441.5
CDS GCA 90 bp TTCCTCTGCATCACTGCTGGAGTCAGGCTCTCCTTCTTTCAAAGCTaGCATCTCTATATGACGTGCTGTTGGATCACCTCCACCCAGAGG +
Preference number: 5 (lower is better)
Translates to: FLCITAGVRLSFFQS*HLYMTCCWITSTQR
Trigger: CCTCTGGGTGGAGGTGATCCAACAGCACGTCATATAGAGATGGCAGCTTTGAAAGAAGGAGAGCCTGACTCCAGCAGTGATGCAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp CACCGGACGGAGTGTTGGAAGCATAGCGCTTTAGGAAGTCAATGGTaGAAGCACCACCTGGCGTACACCAACAACATGTGCTCATTCTGT +
Preference number: 5 (lower is better)
Translates to: HRTECWKHSALGSQW*KHHLAYTNNMCSFC
Trigger: ACAGAATGAGCACATGTTGTTGGTGTACGCCAGGTGGTGCTTCCACCATTGACTTCCTAAAGCGCTATGCTTCCAACACTCCGTCCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp AGCAGAGGTCTTCGTCGGCTGTTTGAAATTCACCGGACGGAGTGTTaGAAGCATAGCGCTTTAGGAAGTCAATGGTGGAAGCACCACCTG +
Preference number: 5 (lower is better)
Translates to: SRGLRRLFEIHRTEC*KHSALGSQWWKHHL
Trigger: CAGGTGGTGCTTCCACCATTGACTTCCTAAAGCGCTATGCTTCCAACACTCCGTCCGGTGAATTTCAAACAGCCGACGAAGACCTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAACTGGAGACCCATGTTTaGCTTTTATGGTTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQLETHV*LLWFLV
Trigger: AACCAGAAACCATAAAAGCAAAACATGGGTCTCCAG...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTGGCCGGAAAGTTCTCTaGAGTCTGGATGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSGRKVL*SLDGKV
Trigger: TACCTTTCCATCCAGACTCAAGAGAACTTTCCGGCC...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCACGAGGACACGGTTTaGTTTGATTTTGGCATTGGA +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALHEDTV*FDFGIG
Trigger: TCCAATGCCAAAATCAAACAAAACCGTGTCCTCGTG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATCGTGGGTCCTGAAGTaGGTCATGAACAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLESWVLK*VMNRRS
Trigger: AGACCTCCTGTTCATGACCAACTTCAGGACCCACGA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCAAAAGCTTTCTTTTCTaGGAACTGCTGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALKSFLF*ELLSSC
Trigger: GCAGGAGGACAGCAGTTCCAAGAAAAGAAAGCTTTT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCTGACCCCAACGTTTTaGCCATGCCTCCCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSLTPTF*PCLPLE
Trigger: TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CCA 90 bp ATTCACCGGACGGAGTGTTGGAAGCATAGCGCTTTAGGAAGTCAATaGTGGAAGCACCACCTGGCGTACACCAACAACATGTGCTCATTC +
Preference number: 5 (lower is better)
Translates to: IHRTECWKHSALGSQ*WKHHLAYTNNMCSF
Trigger: GAATGAGCACATGTTGTTGGTGTACGCCAGGTGGTGCTTCCACCATTGACTTCCTAAAGCGCTATGCTTCCAACACTCCGTCCGGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACATGGCAATTCATCTCTaGCTTTGTGGTACTCAGCCA +
Preference number: 5 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDMAIHL*LCGTQP
Trigger: TGGCTGAGTACCACAAAGCAAGAGATGAATTGCCAT...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTCCTCTAAGGAATAAGTaGAGCTTATCCCAGAATCGC +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSPLRNK*SLSQNR
Trigger: GCGATTCTGGGATAAGCTCAACTTATTCCTTAGAGG...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAATGTTTGATTTTGGCATaGGAGTTTTCGTCTGAATGC +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQCLILA*EFSSEC
Trigger: GCATTCAGACGAAAACTCCAATGCCAAAATCAAACA...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATACTAGGATGAGCTTATaGCAGCGATGGATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDTRMSL*QRWMSG
Trigger: TCCACTCATCCATCGCTGCAATAAGCTCATCCTAGT...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACAGCCTGCTGATCATGTaGTGTTCTACATTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDSLLIM*CSTFSS
Trigger: GGAAGAGAATGTAGAACACAACATGATCAGCAGGCT...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp GCATTCCGCTGTGAAAGGCCGTCACAGGACACAGGCTCGTCTGTTAGAAAGGATCTCTGCAGCACAGGCTaGAGTTTCAGAATCTTCACT +
Preference number: 5 (lower is better)
Translates to: AFRCERPSQDTGSSVRKDLCSTG*SFRIFT
Trigger: AGTGAAGATTCTGAAACTCAAGCCTGTGCTGCAGAG...ATCCTTTCTAACAGACGAGCCTGTGTCCTGTGACGGCCTTTCACAGCGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTAAAAGCTTTCTTTTCTaGGAACTGCTGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSKSFLF*ELLSSC
Trigger: GCAGGAGGACAGCAGTTCCAAGAAAAGAAAGCTTTT...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS GCA 90 bp ACACAGCACAAGTCTATGAAAGCCAGCAGCATCCCAGCTTCCTCGTaGCGTATCACCAATTTGCACAGACCACTCCTTAAGAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: TQHKSMKASSIPASS*RITNLHRPLLKSFP
Trigger: AGGGAAACTCTTAAGGAGTGGTCTGTGCAAATTGGTGATACGGCACGAGGAAGCTGGGATGCTGCTGGCTTTCATAGACTTGTGCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS CCA 90 bp GAATATTCCTCCTTTGACCTCAATGCCCATCCTCTTCAGCAGTCGTaGGTCCTGAAGTTGGTCATGAACAGGAGGTCTTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: EYSSFDLNAHPLQQS*VLKLVMNRRSFRVL
Trigger: AAGGACCCTGAAAGACCTCCTGTTCATGACCAACTTCAGGACCCACGACTGCTGAAGAGGATGGGCATTGAGGTCAAAGGAGGAATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCACAGTGAAGATATCATaGCTGTTCCTTTGGAGCAAT +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALTVKIS*LFLWSN
Trigger: ATTGCTCCAAAGGAACAGCAATGATATCTTCACTGT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCCTCTCAAGGCATATTTaGTCCTGTTTAGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLSRHI*SCLVSF
Trigger: GAAACTCACTAAACAGGACAAAATATGCCTTGAGAG...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAATTCACCCTGGTTTTTaGTGGTTTCAAGACAATCTT +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQIHPGF*WFQDNL
Trigger: AAGATTGTCTTGAAACCACAAAAAACCAGGGTGAAT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATATGGACTGACAAAGACTaGCAGGGGGCCCACACTGAC +
Preference number: 5 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIWTDKD*QGAHTD
Trigger: GTCAGTGTGGGCCCCCTGCAAGTCTTTGTCAGTCCA...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAGCCCACCCCTCCCTTGTCCCGAGCTTCCTCGATCTCCATTCACCATGACCAAATATTCGTGGAGATCTaGTATGTCATTTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: QPTPPLSRASSISIHHDQIFVEI*YVISLC
Trigger: ACAGAGAGAAATGACATACAAGATCTCCACGAATAT...TTGGTCATGGTGAATGGAGATCGAGGAAGCTCGGGACAAGGGAGGGGTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTGGCTTTCAACTTCCTTaGTGTAGTTACCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSGFQLP*CSYQRT
Trigger: AGTTCTCTGGTAACTACACAAAGGAAGTTGAAAGCC...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTTTGCCAGGAATCCAATaGAACCTTGGATGCTATTTG +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSLPGIQ*NLGCYL
Trigger: CAAATAGCATCCAAGGTTCAATTGGATTCCTGGCAA...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CCCATCCCTACCCGTCCTGAACTGTCGCACACTGCATGGCCAAAGACAAACTCTTCAATCTCTGCAAACTaGCCAGGAATCCAATTGAAC +
Preference number: 5 (lower is better)
Translates to: PIPTRPELSHTAWPKTNSSISAN*PGIQLN
Trigger: GTTCAATTGGATTCCTGGCAAGTTTGCAGAGATTGA...AGAGTTTGTCTTTGGCCATGCAGTGTGCGACAGTTCAGGACGGGTAGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACTCTGCAGCACAGGCTaGAGTTTCAGAATCTTCACT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLELCSTG*SFRIFT
Trigger: AGTGAAGATTCTGAAACTCAAGCCTGTGCTGCAGAG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCTGGGGGCTCGAGGGTaGTGGATCCCAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRLGARG*WIPKEY
Trigger: ATATTCCTTTGGGATCCACAACCCTCGAGCCCCCAG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp AGACCTGGCAAGTTTCTTAGTCAATTCCACTGCCAAGGAGAATGTTaGCATTCCAACTGCCAGGAAGTAACCTGTCTACCCAGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RPGKFLSQFHCQGEC*HSNCQEVTCLPRSH
Trigger: GTGGCTCCTGGGTAGACAGGTTACTTCCTGGCAGTTGGAATGTCAACATTCTCCTTGGCAGTGGAATTGACTAAGAAACTTGCCAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS CCA 90 bp GGGAGCTGCTTAGGATCTCCTACTAGGATGAGCTTATTGCAGCGATaGATGAGTGGAGTAAGAGTCTCAATTTCACAAGACTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSCLGSPTRMSLLQR*MSGVRVSISQDCPA
Trigger: GGCTGGACAGTCTTGTGAAATTGAGACTCTTACTCCACTCATCCATCGCTGCAATAAGCTCATCCTAGTAGGAGATCCTAAGCAGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCATAAAATCATTTTGTTaGTCTGAGCCCAACAACAGG +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALIKSFC*SEPNNR
Trigger: CCTGTTGTTGGGCTCAGACAAACAAAATGATTTTAT...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTACAGCATCTGTTTGGTaGAGGACTTCTTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSTASVW*RTSLTS
Trigger: TGAAGTCAAAGAAGTCCTCAACCAAACAGATGCTGT...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCGACGGCTTCCACCCATaGCTGGGAACTTACCCACAG +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALDGFHP*LGTYPQ
Trigger: CTGTGGGTAAGTTCCCAGCAATGGGTGGAAGCCGTC...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTTGAAGTACAGTCCTTaGGTGTATATGAAGAGATCT +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLKYSP*VYMKRS
Trigger: AGATCTCTTCATATACACCAAAGGACTGTACTTCAA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACTTCTTCTCTGAAGCATaGGTCATTTCTGTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDFFSEA*VISVKG
Trigger: CCCTTTTACAGAAATGACCAATGCTTCAGAGAAGAA...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCTTGCATCTGAAGTTCTaGACTAGTCAGAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALLHLKF*TSQKFL
Trigger: AAGAAACTTCTGACTAGTCAAGAACTTCAGATGCAA...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CCAGGAAGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACCTTTGTACTTACACTTaGTGCCACTCAAAGATTCCA +
Preference number: 5 (lower is better)
Translates to: PGSHLLPGFQEYSVDRLDLCTYT*CHSKIP
Trigger: TGGAATCTTTGAGTGGCACAAAGTGTAAGTACAAAG...GTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AAACTCTCCACCCCCACAGAGGAAGCAGTGGCTGACTCTGGGGACAAAGCACTCGTTTCAAGACAATCTTaGTACTTACACTTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: KLSTPTEEAVADSGDKALVSRQS*YLHFVP
Trigger: TGGCACAAAGTGTAAGTACAAAGATTGTCTTGAAAC...GAGTGCTTTGTCCCCAGAGTCAGCCACTGCTTCCTCTGTGGGGGTGGAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATCATCAACAGCTGCATaGGAAGGTGCACACACGAGG +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFESSTAA*EGAHTR
Trigger: CCTCGTGTGTGCACCTTCCAATGCAGCTGTTGATGA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATGCTCCAGTGTCCTCTaGTCCCACCTAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKCSSVL*SHLEFL
Trigger: GAGGAACTCTAGGTGGGACAAGAGGACACTGGAGCA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp GTGTTCTACATTCTCTTCCAGCAGTCTGCAGAAGCGAGCCATCATTaGCTGGTCGTAGCCATACTCCTGTGCTTTCATAGAGATGACTGT +
Preference number: 5 (lower is better)
Translates to: VFYILFQQSAEASHH*LVVAILLCFHRDDC
Trigger: ACAGTCATCTCTATGAAAGCACAGGAGTATGGCTACGACCAGTCAATGATGGCTCGCTTCTGCAGACTGCTGGAAGAGAATGTAGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS GCA 90 bp TGGATGCTATTTGCTCTGACACACGTAACAATAACACAATCCTTCTaGCGACCCTGGAATGCATCCACAGTGTCTACTTCTGCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: WMLFALTHVTITQSF*RPWNASTVSTSAGP
Trigger: AGGACCAGCAGAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTATTGTTACGTGTGTCAGAGCAAATAGCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 90 bp GTCCCACGAGCTGGTCATCTTCAGTTTACAATATGCTGTGGCTGCTaGCCCATGTCACTGGGCTTTCCTATAAAAGCTTTCTTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VPRAGHLQFTICCGC*PMSLGFPIKAFFSW
Trigger: CCAAGAAAAGAAAGCTTTTATAGGAAAGCCCAGTGACATGGGCCAGCAGCCACAGCATATTGTAAACTGAAGATGACCAGCTCGTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp AGTCACCTGCTCCCTGGGTTTCAGGAGTATTCAGTTGACCGTCTGGACACCAGTCTTATTTTCAAAGTCTaGCCCAGTGATGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: SHLLPGFQEYSVDRLDTSLIFKV*PSDVKQ
Trigger: CTGTTTGACATCACTGGGCAAGACTTTGAAAATAAG...ACTGGTGTCCAGACGGTCAACTGAATACTCCTGAAACCCAGGGAGCAGGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCAGGGAATCCATGGCTaGTTCCTCAAGAATGGTCAG +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRQGIHG*FLKNGQ
Trigger: CTGACCATTCTTGAGGAACAAGCCATGGATTCCCTG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCGCAGTGGTAGGAAGCTaGGCACATTTGACGACGGCT +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALAVVGS*AHLTTA
Trigger: AGCCGTCGTCAAATGTGCCAAGCTTCCTACCACTGC...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTGAAGGGGACACCCCCTaGCCCACGGAAAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: TRLTICWEHLNDSSRIILEGDTP*PTESRL
Trigger: GAGTCTGCTTTCCGTGGGCAAGGGGGTGTCCCCTTC...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCATGAAGAGGCTGTACTaGGCTCGTGTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRMKRLY*ARVMVT
Trigger: TGTCACCATCACACGAGCCAAGTACAGCCTCTTCAT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCATCCCTTGGGAAATGTaGAACACACAGCTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRIPWEM*NTQLPR
Trigger: CCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGAT...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp ATATGCCTTACGAGGACCCTTTTTCAGGCCAAGTTTCTCAGCTGTTaGAGTTGGCTCAGGACACTGACGAAATTTCTTTGGCGGCACTAT +
Preference number: 5 (lower is better)
Translates to: ICLTRTLFQAKFLSC*SWLRTLTKFLWRHY
Trigger: ATAGTGCCGCCAAAGAAATTTCGTCAGTGTCCTGAGCCAACTTCAACAGCTGAGAAACTTGGCCTGAAAAAGGGTCCTCGTAAGGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 90 bp AGATGCAGGAGGAGGCAAGCCAGGTTTACGAAATACATCTTCATCTaGTGCTTTCACTTCAGAGTGTTTTGGGCAGTATTCACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: RCRRRQARFTKYIFI*CFHFRVFWAVFTLV
Trigger: AACCAGGGTGAATACTGCCCAAAACACTCTGAAGTGAAAGCAGCAGATGAAGATGTATTTCGTAAACCTGGCTTGCCTCCTCCTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 90 bp TCTGACACACGTAACAATAACACAATCCTTCTGCCGACCCTGGAATaGATCCACAGTGTCTACTTCTGCTGGTCCTTTTCTATCGAACTC +
Preference number: 5 (lower is better)
Translates to: SDTRNNNTILLPTLE*IHSVYFCWSFSIEL
Trigger: GAGTTCGATAGAAAAGGACCAGCAGAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTATTGTTACGTGTGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 90 bp ATGGTCCCACGAGCTGGTCATCTTCAGTTTACAATATGCTGTGGCTaGTGGCCCATGTCACTGGGCTTTCCTATAAAAGCTTTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: MVPRAGHLQFTICCG*WPMSLGFPIKAFFS
Trigger: AGAAAAGAAAGCTTTTATAGGAAAGCCCAGTGACATGGGCCAGCAGCCACAGCATATTGTAAACTGAAGATGACCAGCTCGTGGGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 90 bp TTTGCTCTGACACACGTAACAATAACACAATCCTTCTGCCGACCCTaGAATGCATCCACAGTGTCTACTTCTGCTGGTCCTTTTCTATCG +
Preference number: 5 (lower is better)
Translates to: FALTHVTITQSFCRP*NASTVSTSAGPFLS
Trigger: CGATAGAAAAGGACCAGCAGAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTATTGTTACGTGTGTCAGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAATCATTGCTGTTCCTTaGGAGCAATTTCCAGATGAT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEIIAVP*EQFPDD
Trigger: ATCATCTGGAAATTGCTCCAAAGGAACAGCAATGAT...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATACGTGAATTGGGAGTaGAAGTCCTTCTATCAATAC +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEYVNWE*KSFYQY
Trigger: GTATTGATAGAAGGACTTCAACTCCCAATTCACGTA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAATTTCTGTGGGCGTCCTaGAACCTCTTTAATTTTAGA +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEFLWAS*NLFNFR
Trigger: TCTAAAATTAAAGAGGTTCAAGGACGCCCACAGAAA...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATGCTCCAGTGTCCTCTaGTCCCACCTAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKCSSVL*SHLEFL
Trigger: GAGGAACTCTAGGTGGGACAAGAGGACACTGGAGCA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAATTCAGGAGTATTCAGTaGACCGTCTGGACACCAGTG +
Preference number: 5 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKFRSIQ*TVWTPV
Trigger: CACTGGTGTCCAGACGGTCAACTGAATACTCCTGAA...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCAATGCTGGTTTTCCTaGAGAGCCCAGTGTAGATAC +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRQCWFS*RAQCRY
Trigger: GTATCTACACTGGGCTCTCAAGGAAAACCAGCATTG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436441.5
CDS TCA 90 bp CAACATGTGCTCATTCTGTACCTGGACAAATGGCCTACAGAAAAGTaGTCGTCTCAGCTGGGCTTAGTTGTGAACAAACACGGATTTGCA +
Preference number: 5 (lower is better)
Translates to: QHVLILYLDKWPTEK*SSQLGLVVNKHGFA
Trigger: TGCAAATCCGTGTTTGTTCACAACTAAGCCCAGCTGAGACGATCACTTTTCTGTAGGCCATTTGTCCAGGTACAGAATGAGCACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 90 bp TGCAGGAGGAGGCAAGCCAGGTTTACGAAATACATCTTCATCTGCTaGTTTCACTTCAGAGTGTTTTGGGCAGTATTCACCCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: CRRRQARFTKYIFIC*FHFRVFWAVFTLVF
Trigger: AAAAACCAGGGTGAATACTGCCCAAAACACTCTGAAGTGAAAGCAGCAGATGAAGATGTATTTCGTAAACCTGGCTTGCCTCCTCCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp TCAAGTAGTAAACCACCACTTGTGCTCAACGTGCAGCAGATGATATaGGACTCTAAGATGATGATACTCTGTGTTTTCTGTGGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: SSSKPPLVLNVQQMI*DSKMMILCVFCGRP
Trigger: AGGACGCCCACAGAAAACACAGAGTATCATCATCTTAGAGTCCCATATCATCTGCTGCACGTTGAGCACAAGTGGTGGTTTACTACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000474172.1
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGTCTTCGTCGGCTGTTaGAAATTCACCGGACGGAGT +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKVFVGC*KFTGRS
Trigger: ACTCCGTCCGGTGAATTTCAAACAGCCGACGAAGAC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAAATAGGATCCATAAGTaGACCCCAGACCTTAGATCC +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFENRIHK*TPDLRS
Trigger: GGATCTAAGGTCTGGGGTCAACTTATGGATCCTATT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAACACACAGCATCTGTTaGGTTGAGGACTTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFETHSIC*VEDFFD
Trigger: GTCAAAGAAGTCCTCAACCAAACAGATGCTGTGTGT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACAGTCAACAAACGTGTaGATACTATTATTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEQSTNV*ILLFLC
Trigger: ACAGAGGAATAATAGTATCAACACGTTTGTTGACTG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCTCTCTATTTGGAGAGTaGAGCCATTCTTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRSLFGE*SHSCAT
Trigger: AGTGGCACAAGAATGGCTCAACTCTCCAAATAGAGA...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAAGCCTGCTGATCATGTaGTGTTCTACATTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFESLLIM*CSTFSS
Trigger: GGAAGAGAATGTAGAACACAACATGATCAGCAGGCT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTAATCCACTGTCTAGCTaGCTGCTGGGCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: WLRFILNRVLLSRPKYSINPLSS*LLGKPP
Trigger: GGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATT...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAGGAATATTCCTCCTTaGACCTCAATGCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKRNIPP*TSMPIL
Trigger: GAGGATGGGCATTGAGGTCAAAGGAGGAATATTCCT...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTCTGGGGGCTCGAGGGTaGTGGATCCCAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: WLRFILNRVLLSRPKYSILGARG*WIPKEY
Trigger: ATATTCCTTTGGGATCCACAACCCTCGAGCCCCCAG...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAAATATGCTGGGAGCATTaGAATGATAGCTCAAGAATT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEICWEH*NDSSRI
Trigger: AATTCTTGAGCTATCATTCAAATGCTCCCAGCATAT...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACAAATGCTCAAACTTTaGGCAACCGAAAGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLEQMLKL*ATESCF
Trigger: AAAACAACTTTCGGTTGCCAAAAGTTTGAGCATTTG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGCAGCGTGAGAGACATCCTGACCCCAACGTTTTTGCCATGCCTCCCTTTAGAACTTTTTATATCTGAATaGCACAAATCCCCACCAAGT +
Preference number: 5 (lower is better)
Translates to: SSVRDILTPTFLPCLPLELFISE*HKSPPS
Trigger: ACTTGGTGGGGATTTGTGCAATTCAGATATAAAAAG...TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAGGATGTCTCTCACGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp TTTTTCAGGCCAAGTTTCTCAGCTGTTGAAGTTGGCTCAGGACACTaGCGAAATTTCTTTGGCGGCACTATAGCAGGAGTTGTTCTACAA +
Preference number: 5 (lower is better)
Translates to: FFRPSFSAVEVGSGH*RNFFGGTIAGVVLQ
Trigger: TTGTAGAACAACTCCTGCTATAGTGCCGCCAAAGAAATTTCGTCAGTGTCCTGAGCCAACTTCAACAGCTGAGAAACTTGGCCTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 90 bp TCCCGTCTTTCTGAACCATCTCCAACATCAAACACAAGGTATGGCTaGAATGGCCAATCTGATGAACATCGAATGGCTTCTGTCTGTCTA +
Preference number: 5 (lower is better)
Translates to: SRLSEPSPTSNTRYG*NGQSDEHRMASVCL
Trigger: TAGACAGACAGAAGCCATTCGATGTTCATCAGATTGGCCATTTCAGCCATACCTTGTGTTTGATGTTGGAGATGGTTCAGAAAGACGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000464133.1
CDS CCA 90 bp CACTACAGAATCACACTGGTTCAAAGGGCAAGCATCATCAGTTGCTaGAGACCCATGTTTTGCTTTTATGGTTTCTGGTTCAGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: HYRITLVQRASIISC*RPMFCFYGFWFRRH
Trigger: ATGCCTTCTGAACCAGAAACCATAAAAGCAAAACATGGGTCTCCAGCAACTGATGATGCTTGCCCTTTGAACCAGTGTGATTCTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGTTTTCTGTTACTGTaGGCAAGTACCTCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFECFLLL*ASTSVP
Trigger: AGGAACTGAGGTACTTGCCAACAGTAACAGAAAACA...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGGCAAGCATCATCAGTaGCTGGAGACCCATGTTTTG +
Preference number: 5 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIGKHHQ*LETHVL
Trigger: CAAAACATGGGTCTCCAGCAACTGATGATGCTTGCC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTCTATATGACGTGCTGTaGGATCACCTCCACCCAGAG +
Preference number: 5 (lower is better)
Translates to: WLRFILNRVLLSRPKYSILYDVL*DHLHPE
Trigger: CTCTGGGTGGAGGTGATCCAACAGCACGTCATATAG...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTCACTTCAGAGTGTTTaGGGCAGTATTCACCCTGGT +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALSLQSV*GSIHPG
Trigger: ACCAGGGTGAATACTGCCCAAAACACTCTGAAGTGA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTTCATCAACAGCTGCATaGGAAGGTGCACACACGAGG +
Preference number: 5 (lower is better)
Translates to: WLRFILNRVLLSRPKYSISSTAA*EGAHTR
Trigger: CCTCGTGTGTGCACCTTCCAATGCAGCTGTTGATGA...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTGTAGTAAACCACCACTaGTGCTCAACGTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SHTRLTICWEHLNDSSRIVVNHH*CSTCSR
Trigger: TCTGCTGCACGTTGAGCACAAGTGGTGGTTTACTAC...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCACTAGGATGAGCTTATaGCAGCGATGGATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALTRMSL*QRWMSG
Trigger: TCCACTCATCCATCGCTGCAATAAGCTCATCCTAGT...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAAGAAGCGAGCCATCATaGACTGGTCGTAGCCATACT +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKRSEPS*TGRSHT
Trigger: AGTATGGCTACGACCAGTCAATGATGGCTCGCTTCT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAATCCCTTGGGAAATGTaGAACACACAGCTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKIPWEM*NTQLPR
Trigger: CCTGGGAAGCTGTGTGTTCAACATTTCCCAAGGGAT...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACTGACCCCAACGTTTTaGCCATGCCTCCCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKLTPTF*PCLPLE
Trigger: TTCTAAAGGGAGGCATGGCAAAAACGTTGGGGTCAG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp ATTAAAATAATCTCCATAATTGTGAAATCTGACAGGCACAGGTCTTaGGATGGACTGACAAAGACTTGCAGGGGGCCCACACTGACCAAA +
Preference number: 5 (lower is better)
Translates to: IKIISIIVKSDRHRS*DGLTKTCRGPTLTK
Trigger: TTTGGTCAGTGTGGGCCCCCTGCAAGTCTTTGTCAGTCCATCTCAAGACCTGTGCCTGTCAGATTTCACAATTATGGAGATTATTTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp AGACTGAGGATGAAGAACATTGCACGAATTCTTCATTTCACCAACTaGCTTCTGAGCTATGAGGGGAACTGGCTGTGGTACTTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: RLRMKNIARILHFTN*LLSYEGNWLWYFQN
Trigger: ATTTTGAAAGTACCACAGCCAGTTCCCCTCATAGCTCAGAAGCCAGTTGGTGAAATGAAGAATTCGTGCAATGTTCTTCATCCTCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACGCCGAACCATTTCATaGGGATGGACTAAAAACAAA +
Preference number: 5 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKRRTIS*GWTKNK
Trigger: TTTGTTTTTAGTCCATCCCAATGAAATGGTTCGGCG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp TGGTTACGCTTCATTTTAAATCGGGTGCTTCTTTCCCGCCCAAAATATTCTATTGACTCCGGTTCTAACTaGGTCCTTACAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WLRFILNRVLLSRPKYSIDSGSN*VLTELF
Trigger: GAACAGCTCTGTAAGGACCAAGTTAGAACCGGAGTC...AATAGAATATTTTGGGCGGGAAAGAAGCACCCGATTTAAAATGAAGCGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATATTTCTGGACCATTTCTaGAAGTACAGTCCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIFLDHF*KYSPLV
Trigger: CACCAAAGGACTGTACTTCAAGAAATGGTCCAGAAA...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTCACCAAATGGAACTTaGCAACCTTGCCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALSPNGT*QPCLLE
Trigger: TTCCAACAGGCAAGGTTGCAAAGTTCCATTTGGTGA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTAACAGCTCTAGCCAGTaGGTTCCGACTACCCAACAG +
Preference number: 5 (lower is better)
Translates to: TRLTICWEHLNDSSRIILNSSSQ*VPTTQQ
Trigger: CTGTTGGGTAGTCGGAACCAACTGGCTAGAGCTGTT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCACGAGGACACGGTTTaGTTTGATTTTGGCATTGGA +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALHEDTV*FDFGIG
Trigger: TCCAATGCCAAAATCAAACAAAACCGTGTCCTCGTG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp ATCTCTCTTATTAGTATCAGACTGGCCCTCATTTCTGACAGAAGATaGAGGCCTCACAGGATCTTCAGCCATTGGTTTTTCAGATCGTTT +
Preference number: 5 (lower is better)
Translates to: ISLISIRLALISDRR*RPHRIFSHWFFRSF
Trigger: AAACGATCTGAAAAACCAATGGCTGAAGATCCTGTGAGGCCTTCATCTTCTGTCAGAAATGAGGGCCAGTCTGATACTAATAAGAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 90 bp TCGGATCTCTCTATTGTAGCTTGCGTTGTTGATAATGGTTTGAAATaGCACAATAGGATCCATAAGTTGACCCCAGACCTTAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: SDLSIVACVVDNGLK*HNRIHKLTPDLRSK
Trigger: CTTGGATCTAAGGTCTGGGGTCAACTTATGGATCCTATTGTGGCATTTCAAACCATTATCAACAACGCAAGCTACAATAGAGAGATCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCGTTGTTGATAATGGTTaGAAATGCCACAATAGGATC +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRVVDNG*KCHNRI
Trigger: GATCCTATTGTGGCATTTCAAACCATTATCAACAAC...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ATGTCTGTACCTCACCAGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAAATAGTGTTATCTGCTTaGATCAATACACTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: MSVPHQSHKAHNMLGAFEIVLSA*INTLSC
Trigger: GCAAGACAGTGTATTGATCAAAGCAGATAACACTAT...TTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACTGGTGAGGTACAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAGCCCTGTTCAACAACGCCTCCTGTATCTTTCCTaGAATAGAAACTCTCAATGT +
Preference number: 5 (lower is better)
Translates to: SEEPHFTPCKKNSPVQQRLLYLS*NRNSQC
Trigger: ACATTGAGAGTTTCTATTCAAGGAAAGATACAGGAG...GCGTTGTTGAACAGGGCTATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATACGGTTTTGTTTGATTTaGGCATTGGAGTTTTCGTCT +
Preference number: 5 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIRFCLI*ALEFSS
Trigger: AGACGAAAACTCCAATGCCAAAATCAAACAAAACCG...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCATTCTGTGGTTTACTaGGCTGTCCAAACTGAACTT +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALHSVVY*AVQTEL
Trigger: AAGTTCAGTTTGGACAGCCAAGTAAACCACAGAATG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCTTGCCAGGAATCCAATaGAACCTTGGATGCTATTTG +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALLPGIQ*NLGCYL
Trigger: CAAATAGCATCCAAGGTTCAATTGGATTCCTGGCAA...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp CTCCATAGTGTGAAGTATCGATTGCATAAAATCATTTTGTTTGTCTaGGCCCAACAACAGGGAATCCATGGCTTGTTCCTCAAGAATGGT +
Preference number: 5 (lower is better)
Translates to: LHSVKYRLHKIILFV*AQQQGIHGLFLKNG
Trigger: ACCATTCTTGAGGAACAAGCCATGGATTCCCTGTTGTTGGGCTCAGACAAACAAAATGATTTTATGCAATCGATACTTCACACTATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 90 bp ATCACTCAATTCTCTGGTATCTCCTGCTCCATCTCTTTTGTCTTCTaGCTCTACGTTCTGACAAACAGTACGTACCCAATAAATGTTTGC +
Preference number: 5 (lower is better)
Translates to: ITQFSGISCSISFVF*LYVLTNSTYPINVC
Trigger: GCAAACATTTATTGGGTACGTACTGTTTGTCAGAACGTAGAGTCAGAAGACAAAAGAGATGGAGCAGGAGATACCAGAGAATTGAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474172.1
CDS GCA 90 bp CCTTACAGAGCTGTTCCGTATATGTCGGATCTCTCTATTGTAGCTTaGGTTGTTGATAATGGTTTGAAATGCCACAATAGGATCCATAAG +
Preference number: 5 (lower is better)
Translates to: PYRAVPYMSDLSIVA*VVDNGLKCHNRIHK
Trigger: CTTATGGATCCTATTGTGGCATTTCAAACCATTATCAACAACGCAAGCTACAATAGAGAGATCCGACATATACGGAACAGCTCTGTAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTAAAGGAGCAATTGGCTaGTTCCATCCGACAAAGTGC +
Preference number: 5 (lower is better)
Translates to: TRLTICWEHLNDSSRIILKGAIG*FHPTKC
Trigger: GCACTTTGTCGGATGGAACAAGCCAATTGCTCCTTT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGTCACACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTCTGCACATAAGCAAGTaGTACAGAGTTAGATGGCAT +
Preference number: 5 (lower is better)
Translates to: SHTRLTICWEHLNDSSRILHISK*YRVRWH
Trigger: ATGCCATCTAACTCTGTACAACTTGCTTATGTGCAG...AATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGTGTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTAGGAATATTCCTCCTTaGACCTCAATGCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: TRLTICWEHLNDSSRIILRNIPP*TSMPIL
Trigger: GAGGATGGGCATTGAGGTCAAAGGAGGAATATTCCT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp TGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAAAAGAATAATATGCTGGGAGCATTaGAATGATAGCTCAAGAATT +
Preference number: 5 (lower is better)
Translates to: CHGKDEAKSHTSHLVKRIICWEH*NDSSRI
Trigger: AATTCTTGAGCTATCATTCAAATGCTCCCAGCATAT...TATTCTTTTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CTTTTAATGCCATGGCAAAGACGAAGCGAAGAGCCACACTTCACACCTTGTAAACTTTTTATATCTGAATaGCACAAATCCCCACCAAGT +
Preference number: 5 (lower is better)
Translates to: LLMPWQRRSEEPHFTPCKLFISE*HKSPPS
Trigger: ACTTGGTGGGGATTTGTGCAATTCAGATATAAAAAG...TTTACAAGGTGTGAAGTGTGGCTCTTCGCTTCGTCTTTGCCATGGCATTAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp CACTTTTTCCAAAGCATCAGTGCTAGAATCAGTCAACAAACGTGTTaGTACTATTATTCCTCTGTCACATCCCCTTTCTGGACCATTTCT +
Preference number: 5 (lower is better)
Translates to: HFFQSISARISQQTC*YYYSSVTSPFWTIS
Trigger: AGAAATGGTCCAGAAAGGGGATGTGACAGAGGAATAATAGTATCAACACGTTTGTTGACTGATTCTAGCACTGATGCTTTGGAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAAGGGTCTAAAGAAAGATaGTGTATGAAACCATCTCCT +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKGSKER*CMKPSP
Trigger: AGGAGATGGTTTCATACACAATCTTTCTTTAGACCC...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCATATTCGTGGAGATCTaGTATGTCATTTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALIFVEI*YVISLC
Trigger: ACAGAGAGAAATGACATACAAGATCTCCACGAATAT...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATGTTTGATTTTGGCATaGGAGTTTTCGTCTGAATGC +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKCLILA*EFSSEC
Trigger: GCATTCAGACGAAAACTCCAATGCCAAAATCAAACA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAACGGTTTTGTTTGATTTaGGCATTGGAGTTTTCGTCT +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKRFCLI*ALEFSS
Trigger: AGACGAAAACTCCAATGCCAAAATCAAACAAAACCG...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp AGTGAGGGAGACACAGGTAATGAAATCAAATGCTCAAACTTTTGGCAACCGAAATTTCTGTGGGCGTCCTaGAACCTCTTTAATTTTAGA +
Preference number: 5 (lower is better)
Translates to: SEGDTGNEIKCSNFWQPKFLWAS*NLFNFR
Trigger: TCTAAAATTAAAGAGGTTCAAGGACGCCCACAGAAA...TTTCGGTTGCCAAAAGTTTGAGCATTTGATTTCATTACCTGTGTCTCCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS-3UTR CAA 90 bp CAACATTTCCAGTCTCTGACTTCAAGGACATTATTACGGATACACAATGCCCTCCAAATGCTCAAACTTTaGGCAACCGAAAGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: QHFQSLTSRTLLRIHNALQMLKL*ATESCF
Trigger: AAAACAACTTTCGGTTGCCAAAAGTTTGAGCATTTG...GAGGGCATTGTGTATCCGTAATAATGTCCTTGAAGTCAGAGACTGGAAATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp AGACAATCTTTGTACTTACACTTTGTGCCACTCAAAGATTCCAACTaGGGCCGACTTACAGAATCTTCTTCAACCTCAACTGTATCTTTT +
Preference number: 5 (lower is better)
Translates to: RQSLYLHFVPLKDSN*GRLTESSSTSTVSF
Trigger: AAAAGATACAGTTGAGGTTGAAGAAGATTCTGTAAGTCGGCCTCAGTTGGAATCTTTGAGTGGCACAAAGTGTAAGTACAAAGATTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 90 bp AATCCTTTTTGGTCTTTTCAGGATTATAATTGTATACGATCTGGCTaGAAGTCACCATATCATCCAAATAGGACTCCGGTTCTAACTTGG +
Preference number: 5 (lower is better)
Translates to: NPFWSFQDYNCIRSG*KSPYHPNRTPVLTW
Trigger: CCAAGTTAGAACCGGAGTCCTATTTGGATGATATGGTGACTTGCAGCCAGATCGTATACAATTATAATCCTGAAAAGACCAAAAAGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp GAAAATATTTGCTTTCACCAAATGGAACTTTGCAACCTTGCCTGTTaGAATTATTCGGAGACTGAGGATGAAGAACATTGCACGAATTCT +
Preference number: 5 (lower is better)
Translates to: ENICFHQMELCNLAC*NYSETEDEEHCTNS
Trigger: AGAATTCGTGCAATGTTCTTCATCCTCAGTCTCCGAATAATTCCAACAGGCAAGGTTGCAAAGTTCCATTTGGTGAAAGCAAATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTAGAGTTGAGCCATTCTaGTGCCACTGTTTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: TRLTICWEHLNDSSRIILRVEPF*CHCFKS
Trigger: ACTTTTGAAACAGTGGCACAAGAATGGCTCAACTCT...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS-3UTR CAA 90 bp ACAAGGCTCACAATATGCTGGGAGCATTTGAATGATAGCTCAAGAATTATTCTTCATTCTGTGGTTTACTaGGCTGTCCAAACTGAACTT +
Preference number: 5 (lower is better)
Translates to: TRLTICWEHLNDSSRIILHSVVY*AVQTEL
Trigger: AAGTTCAGTTTGGACAGCCAAGTAAACCACAGAATG...AAGAATAATTCTTGAGCTATCATTCAAATGCTCCCAGCATATTGTGAGCCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 90 bp GTACAAAGCTTTGAAGACTTCTTTTGTGAAACCGTAGTGGCTCTCTaGATACGTGAATTGGGAGTTGAAGTCCTTCTATCAATACTTTTA +
Preference number: 5 (lower is better)
Translates to: VQSFEDFFCETVVAL*IRELGVEVLLSILL
Trigger: TAAAAGTATTGATAGAAGGACTTCAACTCCCAATTCACGTATTCAGAGAGCCACTACGGTTTCACAAAAGAAGTCTTCAAAGCTTTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 90 bp CCTATCAGATTCTGGTACAAATATGTCAGAATTCTGTGCTGTATGTaGCCCTGCTCTTTTAACATCTGTACTTTCACAATCAGAAAGTCT +
Preference number: 5 (lower is better)
Translates to: PIRFWYKYVRILCCM*PCSFNICTFTIRKS
Trigger: AGACTTTCTGATTGTGAAAGTACAGATGTTAAAAGAGCAGGGTCACATACAGCACAGAATTCTGACATATTTGTACCAGAATCTGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp GATCAATACACTGTCTTGCACTTTCATTGGTTCTTTAGAAAATGTTaGGCTGGAAGCTTCCAAACAATGCATATCTTTTCTAGACGTCTT +
Preference number: 5 (lower is better)
Translates to: DQYTVLHFHWFFRKC*AGSFQTMHIFSRRL
Trigger: AAGACGTCTAGAAAAGATATGCATTGTTTGGAAGCTTCCAGCCCAACATTTTCTAAAGAACCAATGAAAGTGCAAGACAGTGTATTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 90 bp TATAGTGTTATCTGCTTTGATCAATACACTGTCTTGCACTTTCATTaGTTCTTTAGAAAATGTTGGGCTGGAAGCTTCCAAACAATGCAT +
Preference number: 5 (lower is better)
Translates to: YSVICFDQYTVLHFH*FFRKCWAGSFQTMH
Trigger: ATGCATTGTTTGGAAGCTTCCAGCCCAACATTTTCTAAAGAACCAATGAAAGTGCAAGACAGTGTATTGATCAAAGCAGATAACACTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 90 bp TTTCTAATAATTTGCTTTAAGCAACTTTGTAGCTCATGGGTTTCCTaGCTAGTCAACTGCCAACCTAGAGATAAATTTCCTCTAAGGAAT +
Preference number: 5 (lower is better)
Translates to: FLIICFKQLCSSWVS*LVNCQPRDKFPLRN
Trigger: ATTCCTTAGAGGAAATTTATCTCTAGGTTGGCAGTTGACTAGTCAGGAAACCCATGAGCTACAAAGTTGCTTAAAGCAAATTATTAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 90 bp TTTCTCAAGACTCAGGATTCTTTCATCATCATCATCATCAGAATCTaGAATAATAATAACCTGTCCACGGGAGGTATCTCCAACATTATT +
Preference number: 5 (lower is better)
Translates to: FLKTQDSFIIIIIRI*NNNNLSTGGISNII
Trigger: AATAATGTTGGAGATACCTCCCGTGGACAGGTTATTATTATTTCAGATTCTGATGATGATGATGATGAAAGAATCCTGAGTCTTGAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp CTGGCAGCTGGAGGTTCGCCCCGCACGGGAGGTTTGTaGCTGCTCAGAGCAGCCACTACAGCAGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LAAGGSPRTGGL*LLRAATTAAGC
Trigger: GCAGCCCGCTGCTGTAGTGGCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 72 bp AACGACAGGGAAGCCCGGCTCGCCCGTAGGAGGTGTTaGTCCAGGATGCTGGGGGCTCGAGGGTTGTGGATC +
Preference number: 6 (lower is better)
Translates to: NDREARLARRRC*SRMLGARGLWI
Trigger: GATCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAACACCTCCTACGGGCGAGCCGGGCTTCCCTGTCGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 72 bp CAGCTGGAGGTTCGCCCCGCACGGGAGGTTTGTGGCTaGTCAGAGCAGCCACTACAGCAGCGGGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: QLEVRPAREVCG*SEQPLQQRAAV
Trigger: TACAGCAGCCCGCTGCTGTAGTGGCTGCTCTGAGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS TCA 72 bp ACAGCAGCGGGCTGCTGTATATGGCTCAGGTCCTGGTaGACGACAGGGAAGCCCGGCTCGCCCGTAGGAGGT +
Preference number: 6 (lower is better)
Translates to: TAAGCCIWLRSW*TTGKPGSPVGG
Trigger: ACCTCCTACGGGCGAGCCGGGCTTCCCTGTCGTTCACCAGGACCTGAGCCATATACAGCAGCCCGCTGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp TTTGCTCTGACACGTGGAAGCCTCGGGACTGGCAGCTaGAGGTTCGCCCCGCACGGGAGGTTTGTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: FALTRGSLGTGS*RFAPHGRFVAA
Trigger: AGCAGCCACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp GCTGCTGGGCAAACCACCCTGGGGTCTGGACCCCTCTaGGGCTATGGTAGGAGGGTGAGTGAGACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: AAGQTTLGSGPL*GYGRRVSETSL
Trigger: CAGAGAAGTCTCACTCACCCTCCTACCATAGCCCCAGAGGGGTCCAGACCCCAGGGTGGTTTGCCCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp GCTCCTCTTCCGGGTCATCACATTTGCTCTGACACGTaGAAGCCTCGGGACTGGCAGCTGGAGGTTCGCCCC +
Preference number: 6 (lower is better)
Translates to: APLPGHHICSDT*KPRDWQLEVRP
Trigger: GGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGGAAGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp AATCCACTGTCTAGCTTGCTGCTGGGCAAACCACCCTaGGGTCTGGACCCCTCTGGGGCTATGGTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: NPLSSLLLGKPP*GLDPSGAMVGG
Trigger: CCCTCCTACCATAGCCCCAGAGGGGTCCAGACCCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp CCCGGCTCGCCCGTAGGAGGTGTTGCTCCAGGATGCTaGGGGCTCGAGGGTTGTGGATCCCAAAGGAATATT +
Preference number: 6 (lower is better)
Translates to: PGSPVGGVAPGC*GLEGCGSQRNI
Trigger: AATATTCCTTTGGGATCCACAACCCTCGAGCCCCCAGCATCCTGGAGCAACACCTCCTACGGGCGAGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp CATCACATTTGCTCTGACACGTGGAAGCCTCGGGACTaGCAGCTGGAGGTTCGCCCCGCACGGGAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: HHICSDTWKPRD*QLEVRPAREVC
Trigger: ACAAACCTCCCGTGCGGGGCGAACCTCCAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 72 bp TCCTGTGACAGAGCTCCTCTTCCGGGTCATCACATTTaGTCTGACACGTGGAAGCCTCGGGACTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SCDRAPLPGHHI*SDTWKPRDWQL
Trigger: CAGCTGCCAGTCCCGAGGCTTCCACGTGTCAGAGCAAATGTGATGACCCGGAAGAGGAGCTCTGTCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 72 bp GCAGCAACAGATGTCTTGGCAAATCCACTGTCTAGCTaGCTGCTGGGCAAACCACCCTGGGGTCTGGACCCC +
Preference number: 6 (lower is better)
Translates to: AATDVLANPLSS*LLGKPPWGLDP
Trigger: GGGGTCCAGACCCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATTTGCCAAGACATCTGTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 72 bp CAGCAACAGATGTCTTGGCAAATCCACTGTCTAGCTTaGTGCTGGGCAAACCACCCTGGGGTCTGGACCCCT +
Preference number: 6 (lower is better)
Translates to: QQQMSWQIHCLA*CWANHPGVWTP
Trigger: AGGGGTCCAGACCCCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATTTGCCAAGACATCTGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS TCA 72 bp AACCTGTCTACCCAGGAGCCACACAGCACAAGTCTATaGAAGCCAGCAGCATCCCAGCTTCCTCGTGCCGTA +
Preference number: 6 (lower is better)
Translates to: NLSTQEPHSTSL*KPAASQLPRAV
Trigger: TACGGCACGAGGAAGCTGGGATGCTGCTGGCTTTCATAGACTTGTGCTGTGTGGCTCCTGGGTAGACAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS CAA 72 bp CTCCGTGTAAACGCAGTGGTAGGAAGCTTGGCACATTaGACGACGGCTTCCACCCATTGCTGGGAACTTACC +
Preference number: 6 (lower is better)
Translates to: LRVNAVVGSLAH*TTASTHCWELT
Trigger: GGTAAGTTCCCAGCAATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTCCTACCACTGCGTTTACACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp ACACTCCAAGCAGTAGCAGAGGTCTTCGTCGGCTGTTaGAAATTCACCGGACGGAGTGTTGGAAGCATAGCG +
Preference number: 6 (lower is better)
Translates to: TLQAVAEVFVGC*KFTGRSVGSIA
Trigger: CGCTATGCTTCCAACACTCCGTCCGGTGAATTTCAAACAGCCGACGAAGACCTCTGCTACTGCTTGGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp TTCTCAGAACTCCGTGTAAACGCAGTGGTAGGAAGCTaGGCACATTTGACGACGGCTTCCACCCATTGCTGG +
Preference number: 6 (lower is better)
Translates to: FSELRVNAVVGS*AHLTTASTHCW
Trigger: CCAGCAATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTCCTACCACTGCGTTTACACGGAGTTCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TTGGAGTCAGAGGGTGTGTGGTATAGAGAAGCAGCAACAGATGTCTaGGCAAATCCACTGTCTAGCTTGCTGCTGGGCAAACCACCCTGG +
Preference number: 6 (lower is better)
Translates to: LESEGVWYREAATDV*ANPLSSLLLGKPPW
Trigger: CCAGGGTGGTTTGCCCAGCAGCAAGCTAGACAGTGGATTTGCCAAGACATCTGTTGCTGCTTCTCTATACCACACACCCTCTGACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 90 bp TTCTCAGAACTCCGTGTAAACGCAGTGGTAGGAAGCTTGGCACATTaGACGACGGCTTCCACCCATTGCTGGGAACTTACCCACAGCAAA +
Preference number: 6 (lower is better)
Translates to: FSELRVNAVVGSLAH*TTASTHCWELTHSK
Trigger: TTTGCTGTGGGTAAGTTCCCAGCAATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTCCTACCACTGCGTTTACACGGAGTTCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp CCAGATGATTTCTCAGAACTCCGTGTAAACGCAGTGGTAGGAAGCTaGGCACATTTGACGACGGCTTCCACCCATTGCTGGGAACTTACC +
Preference number: 6 (lower is better)
Translates to: PDDFSELRVNAVVGS*AHLTTASTHCWELT
Trigger: GGTAAGTTCCCAGCAATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTCCTACCACTGCGTTTACACGGAGTTCTGAGAAATCATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp GAAGGGAAGAGGCATATGTCTGGATGCATCCTGTACTaGACAGTGAGCTGTAGAATGGGCAGCCTGCTGATC +
Preference number: 6 (lower is better)
Translates to: EGKRHMSGCILY*TVSCRMGSLLI
Trigger: GATCAGCAGGCTGCCCATTCTACAGCTCACTGTTCAGTACAGGATGCATCCAGACATATGCCTCTTCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 72 bp TCGAGGGTTGTGGATCCCAAAGGAATATTCCTCCTTTaGCCTCAATGCCCATCCTCTTCAGCAGTCGTGGGT +
Preference number: 6 (lower is better)
Translates to: SRVVDPKGIFLL*PQCPSSSAVVG
Trigger: ACCCACGACTGCTGAAGAGGATGGGCATTGAGGTCAAAGGAGGAATATTCCTTTGGGATCCACAACCCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp GAGTGTTGGAAGCATAGCGCTTTAGGAAGTCAATGGTaGAAGCACCACCTGGCGTACACCAACAACATGTGC +
Preference number: 6 (lower is better)
Translates to: ECWKHSALGSQW*KHHLAYTNNMC
Trigger: GCACATGTTGTTGGTGTACGCCAGGTGGTGCTTCCACCATTGACTTCCTAAAGCGCTATGCTTCCAACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp ACGGAGTGTTGGAAGCATAGCGCTTTAGGAAGTCAATaGTGGAAGCACCACCTGGCGTACACCAACAACATG +
Preference number: 6 (lower is better)
Translates to: TECWKHSALGSQ*WKHHLAYTNNM
Trigger: CATGTTGTTGGTGTACGCCAGGTGGTGCTTCCACCATTGACTTCCTAAAGCGCTATGCTTCCAACACTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp AGTTGCATCAGGGTCCTCAAATGTCCGAGGATGAAGAGGCTGTACTaGGCTCGTGTGATGGTGACATTCAATCTCTGCAAACTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SCIRVLKCPRMKRLY*ARVMVTFNLCKLAR
Trigger: CCTGGCAAGTTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACATTTGAGGACCCTGATGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436441.5
CDS CAA 90 bp CTCATCATCAGGGTCCTCAAATGTCCGAGGATGAAGAGGCTGTACTaGGCTCGTGTGATGGTGACATTCAATCTCTGCAAACTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: LIIRVLKCPRMKRLY*ARVMVTFNLCKLAR
Trigger: CCTGGCAAGTTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACATTTGAGGACCCTGATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477049.1
CDS GCA 72 bp GCAGCATCCCAGCTTCCTCGTGCCGTATCACCAATTTaGACAGACCACTCCTTAAGAGTTTCCCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: AASQLPRAVSPI*TDHSLRVSLFF
Trigger: GAAGAAAAGGGAAACTCTTAAGGAGTGGTCTGTGCAAATTGGTGATACGGCACGAGGAAGCTGGGATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS GCA 72 bp AAGTCTATGAAAGCCAGCAGCATCCCAGCTTCCTCGTaGCGTATCACCAATTTGCACAGACCACTCCTTAAG +
Preference number: 6 (lower is better)
Translates to: KSMKASSIPASS*RITNLHRPLLK
Trigger: CTTAAGGAGTGGTCTGTGCAAATTGGTGATACGGCACGAGGAAGCTGGGATGCTGCTGGCTTTCATAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS CCA 72 bp CTTCGTCGGCTGTTTGAAATTCACCGGACGGAGTGTTaGAAGCATAGCGCTTTAGGAAGTCAATGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LRRLFEIHRTEC*KHSALGSQWWK
Trigger: CTTCCACCATTGACTTCCTAAAGCGCTATGCTTCCAACACTCCGTCCGGTGAATTTCAAACAGCCGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp CTTCTTTCAAAGCTGCCATCTCTATATGACGTGCTGTaGGATCACCTCCACCCAGAGGGTCTTCTGAAGTGG +
Preference number: 6 (lower is better)
Translates to: LLSKLPSLYDVL*DHLHPEGLLKW
Trigger: CCACTTCAGAAGACCCTCTGGGTGGAGGTGATCCAACAGCACGTCATATAGAGATGGCAGCTTTGAAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp GAGGGTGTGTGGTATAGAGAAGCAGCAACAGATGTCTaGGCAAATCCACTGTCTAGCTTGCTGCTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: EGVWYREAATDV*ANPLSSLLLGK
Trigger: TTTGCCCAGCAGCAAGCTAGACAGTGGATTTGCCAAGACATCTGTTGCTGCTTCTCTATACCACACACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 90 bp TTTTCCATCAGGGTCCTCAAATGTCCGAGGATGAAGAGGCTGTACTaGGCTCGTGTGATGGTGACATTCAATCTCTGCAAACTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: FSIRVLKCPRMKRLY*ARVMVTFNLCKLAR
Trigger: CCTGGCAAGTTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACATTTGAGGACCCTGATGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp ATTCTCTTCCAGCAGTCTGCAGAAGCGAGCCATCATTaGCTGGTCGTAGCCATACTCCTGTGCTTTCATAGA +
Preference number: 6 (lower is better)
Translates to: ILFQQSAEASHH*LVVAILLCFHR
Trigger: TCTATGAAAGCACAGGAGTATGGCTACGACCAGTCAATGATGGCTCGCTTCTGCAGACTGCTGGAAGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS GCA 72 bp GGAAGCTTGGCACATTTGACGACGGCTTCCACCCATTaGTGGGAACTTACCCACAGCAAATGCAAACATTTT +
Preference number: 6 (lower is better)
Translates to: GSLAHLTTASTH*WELTHSKCKHF
Trigger: AAAATGTTTGCATTTGCTGTGGGTAAGTTCCCAGCAATGGGTGGAAGCCGTCGTCAAATGTGCCAAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp TCCTGTGCTTTCATAGAGATGACTGTCGGAGGGAGCTaGTTAGGATCTCCTACTAGGATGAGCTTATTGCAG +
Preference number: 6 (lower is better)
Translates to: SCAFIEMTVGGS*LGSPTRMSLLQ
Trigger: CTGCAATAAGCTCATCCTAGTAGGAGATCCTAAGCAGCTCCCTCCGACAGTCATCTCTATGAAAGCACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CCA 72 bp ACACACGTAACAATAACACAATCCTTCTGCCGACCCTaGAATGCATCCACAGTGTCTACTTCTGCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: THVTITQSFCRP*NASTVSTSAGP
Trigger: AGGACCAGCAGAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTATTGTTACGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 72 bp GACCCTTTTTCAGGCCAAGTTTCTCAGCTGTTGAAGTaGGCTCAGGACACTGACGAAATTTCTTTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: DPFSGQVSQLLK*AQDTDEISLAA
Trigger: TGCCGCCAAAGAAATTTCGTCAGTGTCCTGAGCCAACTTCAACAGCTGAGAAACTTGGCCTGAAAAAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp ACAGTGAGCTGTAGAATGGGCAGCCTGCTGATCATGTaGTGTTCTACATTCTCTTCCAGCAGTCTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: TVSCRMGSLLIM*CSTFSSSSLQK
Trigger: CTTCTGCAGACTGCTGGAAGAGAATGTAGAACACAACATGATCAGCAGGCTGCCCATTCTACAGCTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CAA 72 bp AGGGTCCTCAAATGTCCGAGGATGAAGAGGCTGTACTaGGCTCGTGTGATGGTGACATTCAATCTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: RVLKCPRMKRLY*ARVMVTFNLCK
Trigger: TTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAGCCTCTTCATCCTCGGACATTTGAGGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 72 bp AGCAGCATCCCAGCTTCCTCGTGCCGTATCACCAATTaGCACAGACCACTCCTTAAGAGTTTCCCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: SSIPASSCRITN*HRPLLKSFPFL
Trigger: AAGAAAAGGGAAACTCTTAAGGAGTGGTCTGTGCAAATTGGTGATACGGCACGAGGAAGCTGGGATGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS CAA 90 bp CATATGCCTTACGAGGACCCTTTTTCAGGCCAAGTTTCTCAGCTGTaGAAGTTGGCTCAGGACACTGACGAAATTTCTTTGGCGGCACTA +
Preference number: 6 (lower is better)
Translates to: HMPYEDPFSGQVSQL*KLAQDTDEISLAAL
Trigger: TAGTGCCGCCAAAGAAATTTCGTCAGTGTCCTGAGCCAACTTCAACAGCTGAGAAACTTGGCCTGAAAAAGGGTCCTCGTAAGGCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp ACTGTCGGAGGGAGCTGCTTAGGATCTCCTACTAGGATGAGCTTATaGCAGCGATGGATGAGTGGAGTAAGAGTCTCAATTTCACAAGAC +
Preference number: 6 (lower is better)
Translates to: TVGGSCLGSPTRMSL*QRWMSGVRVSISQD
Trigger: GTCTTGTGAAATTGAGACTCTTACTCCACTCATCCATCGCTGCAATAAGCTCATCCTAGTAGGAGATCCTAAGCAGCTCCCTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CAA 90 bp ATGAAAGCCAGCAGCATCCCAGCTTCCTCGTGCCGTATCACCAATTaGCACAGACCACTCCTTAAGAGTTTCCCTTTTCTTCTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: MKASSIPASSCRITN*HRPLLKSFPFLLSF
Trigger: GAAGGAAAGAAGAAAAGGGAAACTCTTAAGGAGTGGTCTGTGCAAATTGGTGATACGGCACGAGGAAGCTGGGATGCTGCTGGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464133.1
CDS TCA 72 bp CCAAGTTTCTCAGCTGTTGAAGTTGGCTCAGGACACTaGCGAAATTTCTTTGGCGGCACTATAGCAGGAGTT +
Preference number: 6 (lower is better)
Translates to: PSFSAVEVGSGH*RNFFGGTIAGV
Trigger: AACTCCTGCTATAGTGCCGCCAAAGAAATTTCGTCAGTGTCCTGAGCCAACTTCAACAGCTGAGAAACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp ACGTGCTGTTGGATCACCTCCACCCAGAGGGTCTTCTaGAGTGGAGACAATTACTTCATTTGTTGGTACTGT +
Preference number: 6 (lower is better)
Translates to: TCCWITSTQRVF*SGDNYFICWYC
Trigger: ACAGTACCAACAAATGAAGTAATTGTCTCCACTTCAGAAGACCCTCTGGGTGGAGGTGATCCAACAGCACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp AGCTACATAATCCAAAGACCGCTGGGACAACTCATATaGCTTACGAGGACCCTTTTTCAGGCCAAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: SYIIQRPLGQLI*LTRTLFQAKFL
Trigger: GAGAAACTTGGCCTGAAAAAGGGTCCTCGTAAGGCATATGAGTTGTCCCAGCGGTCTTTGGATTATGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp GCTGGTCATCTTCAGTTTACAATATGCTGTGGCTGCTaGCCCATGTCACTGGGCTTTCCTATAAAAGCTTTC +
Preference number: 6 (lower is better)
Translates to: AGHLQFTICCGC*PMSLGFPIKAF
Trigger: GAAAGCTTTTATAGGAAAGCCCAGTGACATGGGCCAGCAGCCACAGCATATTGTAAACTGAAGATGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 72 bp GGGAGCTGCTTAGGATCTCCTACTAGGATGAGCTTATaGCAGCGATGGATGAGTGGAGTAAGAGTCTCAATT +
Preference number: 6 (lower is better)
Translates to: GSCLGSPTRMSL*QRWMSGVRVSI
Trigger: AATTGAGACTCTTACTCCACTCATCCATCGCTGCAATAAGCTCATCCTAGTAGGAGATCCTAAGCAGCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS TCA 72 bp CTCATTCTGTACCTGGACAAATGGCCTACAGAAAAGTaGTCGTCTCAGCTGGGCTTAGTTGTGAACAAACAC +
Preference number: 6 (lower is better)
Translates to: LILYLDKWPTEK*SSQLGLVVNKH
Trigger: GTGTTTGTTCACAACTAAGCCCAGCTGAGACGATCACTTTTCTGTAGGCCATTTGTCCAGGTACAGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp TTTGCTCTGACACACGTAACAATAACACAATCCTTCTaGCGACCCTGGAATGCATCCACAGTGTCTACTTCT +
Preference number: 6 (lower is better)
Translates to: FALTHVTITQSF*RPWNASTVSTS
Trigger: AGAAGTAGACACTGTGGATGCATTCCAGGGTCGGCAGAAGGATTGTGTTATTGTTACGTGTGTCAGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS GCA 72 bp CTGTACTTGGCTCGTGTGATGGTGACATTCAATCTCTaGAAACTTGCCAGGAATCCAATTGAACCTTGGATG +
Preference number: 6 (lower is better)
Translates to: LYLARVMVTFNL*KLARNPIEPWM
Trigger: CATCCAAGGTTCAATTGGATTCCTGGCAAGTTTGCAGAGATTGAATGTCACCATCACACGAGCCAAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CAA 90 bp CTAGTCAACTGCCAACCTAGAGATAAATTTCCTCTAAGGAATAAGTaGAGCTTATCCCAGAATCGCTTGCAAAGAGACTGCTGCCCAAGC +
Preference number: 6 (lower is better)
Translates to: LVNCQPRDKFPLRNK*SLSQNRLQRDCCPS
Trigger: GCTTGGGCAGCAGTCTCTTTGCAAGCGATTCTGGGATAAGCTCAACTTATTCCTTAGAGGAAATTTATCTCTAGGTTGGCAGTTGACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TCTTCTTTTACTTTCCTTTGCAGCTGCGATGAGTTCTaGGGTGAATCGGATGGGAACGTAATAACACTGGCT +
Preference number: 6 (lower is better)
Translates to: SSFTFLCSCDEF*GESDGNVITLA
Trigger: AGCCAGTGTTATTACGTTCCCATCCGATTCACCTCAGAACTCATCGCAGCTGCAAAGGAAAGTAAAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp ATTAGTATCAGACTGGCCCTCATTTCTGACAGAAGATaGAGGCCTCACAGGATCTTCAGCCATTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: ISIRLALISDRR*RPHRIFSHWFF
Trigger: GAAAAACCAATGGCTGAAGATCCTGTGAGGCCTTCATCTTCTGTCAGAAATGAGGGCCAGTCTGATACTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp ACGAATTCTTCATTTCACCAACTGGCTTCTGAGCTATaGGGGGAACTGGCTGTGGTACTTTCAAAATCGACT +
Preference number: 6 (lower is better)
Translates to: TNSSFHQLASEL*GELAVVLSKST
Trigger: AGTCGATTTTGAAAGTACCACAGCCAGTTCCCCTCATAGCTCAGAAGCCAGTTGGTGAAATGAAGAATTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TCCTGTACTGTTCATAAAGGTATGTTAGGGAAGCAGTaGGGCTGCACAGTATTTACTTGCTGTGTGACCTTG +
Preference number: 6 (lower is better)
Translates to: SCTVHKGMLGKQ*GCTVFTCCVTL
Trigger: CAAGGTCACACAGCAAGTAAATACTGTGCAGCCTCACTGCTTCCCTAACATACCTTTATGAACAGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477049.1
CDS GCA 72 bp AGAATCACACTGGTTCAAAGGGCAAGCATCATCAGTTaGTGGAGACCCATGTTTTGCTTTTATGGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RITLVQRASIIS*WRPMFCFYGFW
Trigger: CCAGAAACCATAAAAGCAAAACATGGGTCTCCAGCAACTGATGATGCTTGCCCTTTGAACCAGTGTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp AGGCAAGCCAGGTTTACGAAATACATCTTCATCTGCTaGTTTCACTTCAGAGTGTTTTGGGCAGTATTCACC +
Preference number: 6 (lower is better)
Translates to: RQARFTKYIFIC*FHFRVFWAVFT
Trigger: GGTGAATACTGCCCAAAACACTCTGAAGTGAAAGCAGCAGATGAAGATGTATTTCGTAAACCTGGCTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp AGGAGGCAAGCCAGGTTTACGAAATACATCTTCATCTaGTGCTTTCACTTCAGAGTGTTTTGGGCAGTATTC +
Preference number: 6 (lower is better)
Translates to: RRQARFTKYIFI*CFHFRVFWAVF
Trigger: GAATACTGCCCAAAACACTCTGAAGTGAAAGCAGCAGATGAAGATGTATTTCGTAAACCTGGCTTGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp CATTTTGTTTGTCTGAGCCCAACAACAGGGAATCCATaGCTTGTTCCTCAAGAATGGTCAGCAACATGCAAA +
Preference number: 6 (lower is better)
Translates to: HFVCLSPTTGNP*LVPQEWSATCK
Trigger: TTTGCATGTTGCTGACCATTCTTGAGGAACAAGCCATGGATTCCCTGTTGTTGGGCTCAGACAAACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp ATCACACTGGTTCAAAGGGCAAGCATCATCAGTTGCTaGAGACCCATGTTTTGCTTTTATGGTTTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ITLVQRASIISC*RPMFCFYGFWF
Trigger: GAACCAGAAACCATAAAAGCAAAACATGGGTCTCCAGCAACTGATGATGCTTGCCCTTTGAACCAGTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp GTTGGTACTGTTCCATTTAACACTACAGAATCACACTaGTTCAAAGGGCAAGCATCATCAGTTGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: VGTVPFNTTESH*FKGQASSVAGD
Trigger: GTCTCCAGCAACTGATGATGCTTGCCCTTTGAACCAGTGTGATTCTGTAGTGTTAAATGGAACAGTACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TTTCTAATTCCCATAAAACCTCATGCAAGAATGGCAATTCATCTCTaGCTTTGTGGTACTCAGCCACACACTCCAAGCAGTAGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: FLIPIKPHARMAIHL*LCGTQPHTPSSSRG
Trigger: ACCTCTGCTACTGCTTGGAGTGTGTGGCTGAGTACCACAAAGCAAGAGATGAATTGCCATTCTTGCATGAGGTTTTATGGGAATTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TCTGAACCATCTCCAACATCAAACACAAGGTATGGCTaGAATGGCCAATCTGATGAACATCGAATGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SEPSPTSNTRYG*NGQSDEHRMAS
Trigger: AGAAGCCATTCGATGTTCATCAGATTGGCCATTTCAGCCATACCTTGTGTTTGATGTTGGAGATGGTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000464133.1
CDS TCA 72 bp TTCTCTGGTATCTCCTGCTCCATCTCTTTTGTCTTCTaGCTCTACGTTCTGACAAACAGTACGTACCCAATA +
Preference number: 6 (lower is better)
Translates to: FSGISCSISFVF*LYVLTNSTYPI
Trigger: TATTGGGTACGTACTGTTTGTCAGAACGTAGAGTCAGAAGACAAAAGAGATGGAGCAGGAGATACCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474172.1
CDS CCA 72 bp TCCCTGGATGTTTATCAAACACCTGAAAGGAGCAATTaGCTTGTTCCATCCGACAAAGTGCTTCAACACATA +
Preference number: 6 (lower is better)
Translates to: SLDVYQTPERSN*LVPSDKVLQHI
Trigger: TATGTGTTGAAGCACTTTGTCGGATGGAACAAGCCAATTGCTCCTTTCAGGTGTTTGATAAACATCCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp CCAACAACAGGGAATCCATGGCTTGTTCCTCAAGAATaGTCAGCAACATGCAAATACCTAACCAATAGCTTT +
Preference number: 6 (lower is better)
Translates to: PTTGNPWLVPQE*SATCKYLTNSF
Trigger: AAAGCTATTGGTTAGGTATTTGCATGTTGCTGACCATTCTTGAGGAACAAGCCATGGATTCCCTGTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp TCATTTCCCACAAGATCTCTCTTATTAGTATCAGACTaGCCCTCATTTCTGACAGAAGATGAAGGCCTCACA +
Preference number: 6 (lower is better)
Translates to: SFPTRSLLLVSD*PSFLTEDEGLT
Trigger: TGTGAGGCCTTCATCTTCTGTCAGAAATGAGGGCCAGTCTGATACTAATAAGAGAGATCTTGTGGGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp AAACCACCACTTGTGCTCAACGTGCAGCAGATGATATaGGACTCTAAGATGATGATACTCTGTGTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: KPPLVLNVQQMI*DSKMMILCVFC
Trigger: ACAGAAAACACAGAGTATCATCATCTTAGAGTCCCATATCATCTGCTGCACGTTGAGCACAAGTGGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000474172.1
CDS CCA 72 bp TTAGGATCTCCTACTAGGATGAGCTTATTGCAGCGATaGATGAGTGGAGTAAGAGTCTCAATTTCACAAGAC +
Preference number: 6 (lower is better)
Translates to: LGSPTRMSLLQR*MSGVRVSISQD
Trigger: GTCTTGTGAAATTGAGACTCTTACTCCACTCATCCATCGCTGCAATAAGCTCATCCTAGTAGGAGATCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224140.6
ENST00000436441.5
CDS CCA 72 bp ACAGTAAGAGTAATTTCCTTGGAGTCAGAGGGTGTGTaGTATAGAGAAGCAGCAACAGATGTCTTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: TVRVISLESEGV*YREAATDVLAN
Trigger: ATTTGCCAAGACATCTGTTGCTGCTTCTCTATACCACACACCCTCTGACTCCAAGGAAATTACTCTTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224140.6
ENST00000436441.5
ENST00000477049.1
CDS CCA 72 bp AAACCATCAGTCATCCTCAAGACTAACCCCCAATACTaGAAAATCCACTTTCACTATGGAGGGTCATTAAGG +
Preference number: 6 (lower is better)
Translates to: KPSVILKTNPQY*KIHFHYGGSLR
Trigger: CCTTAATGACCCTCCATAGTGAAAGTGGATTTTCCAGTATTGGGGGTTAGTCTTGAGGATGACTGATGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474172.1
CDS CAA 72 bp GATAATGGTTTGAAATGCCACAATAGGATCCATAAGTaGACCCCAGACCTTAGATCCAAGGCGATCCAGAAT +
Preference number: 6 (lower is better)
Translates to: DNGLKCHNRIHK*TPDLRSKAIQN
Trigger: ATTCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAACTTATGGATCCTATTGTGGCATTTCAAACCATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TGCGTTGTTGATAATGGTTTGAAATGCCACAATAGGATCCATAAGTaGACCCCAGACCTTAGATCCAAGGCGATCCAGAATCACCATAAA +
Preference number: 6 (lower is better)
Translates to: CVVDNGLKCHNRIHK*TPDLRSKAIQNHHK
Trigger: TTTATGGTGATTCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAACTTATGGATCCTATTGTGGCATTTCAAACCATTATCAACAACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp GATGGCATGGAATGCAATGACAGTGAAGATATCATTGCTGTTCCTTaGGAGCAATTTCCAGATGATTTCTCAGAACTCCGTGTAAACGCA +
Preference number: 6 (lower is better)
Translates to: DGMECNDSEDIIAVP*EQFPDDFSELRVNA
Trigger: TGCGTTTACACGGAGTTCTGAGAAATCATCTGGAAATTGCTCCAAAGGAACAGCAATGATATCTTCACTGTCATTGCATTCCATGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp CTCTGTCACATCCCCTTTCTGGACCATTTCTTGAAGTACAGTCCTTaGGTGTATATGAAGAGATCTCTTTTACAGACTTCTGCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: LCHIPFLDHFLKYSP*VYMKRSLLQTSASL
Trigger: CAAGGAAGCAGAAGTCTGTAAAAGAGATCTCTTCATATACACCAAAGGACTGTACTTCAAGAAATGGTCCAGAAAGGGGATGTGACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp ACTGTTGAAACGTGCTGCTCTGGATGTTCCCTCTCAAGGCATATTTaGTCCTGTTTAGTGAGTTTCTCAAGACTCAGGATTCTTTCATCA +
Preference number: 6 (lower is better)
Translates to: TVETCCSGCSLSRHI*SCLVSFSRLRILSS
Trigger: TGATGAAAGAATCCTGAGTCTTGAGAAACTCACTAAACAGGACAAAATATGCCTTGAGAGGGAACATCCAGAGCAGCACGTTTCAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp GTGAAGTATCGATTGCATAAAATCATTTTGTTTGTCTaGGCCCAACAACAGGGAATCCATGGCTTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: VKYRLHKIILFV*AQQQGIHGLFL
Trigger: GAGGAACAAGCCATGGATTCCCTGTTGTTGGGCTCAGACAAACAAAATGATTTTATGCAATCGATACTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp CAAAGCATCAGTGCTAGAATCAGTCAACAAACGTGTTaGTACTATTATTCCTCTGTCACATCCCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: QSISARISQQTC*YYYSSVTSPFW
Trigger: CCAGAAAGGGGATGTGACAGAGGAATAATAGTATCAACACGTTTGTTGACTGATTCTAGCACTGATGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TTGTACTTACACTTTGTGCCACTCAAAGATTCCAACTaGGGCCGACTTACAGAATCTTCTTCAACCTCAACT +
Preference number: 6 (lower is better)
Translates to: LYLHFVPLKDSN*GRLTESSSTST
Trigger: AGTTGAGGTTGAAGAAGATTCTGTAAGTCGGCCTCAGTTGGAATCTTTGAGTGGCACAAAGTGTAAGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp GCTGTTCCGTATATGTCGGATCTCTCTATTGTAGCTTaGGTTGTTGATAATGGTTTGAAATGCCACAATAGG +
Preference number: 6 (lower is better)
Translates to: AVPYMSDLSIVA*VVDNGLKCHNR
Trigger: CCTATTGTGGCATTTCAAACCATTATCAACAACGCAAGCTACAATAGAGAGATCCGACATATACGGAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp TTGTGGTTTCAAGACAATCTTTGTACTTACACTTTGTaGCACTCAAAGATTCCAACTGAGGCCGACTTACAG +
Preference number: 6 (lower is better)
Translates to: LWFQDNLCTYTL*HSKIPTEADLQ
Trigger: CTGTAAGTCGGCCTCAGTTGGAATCTTTGAGTGGCACAAAGTGTAAGTACAAAGATTGTCTTGAAACCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp TGCCAACCTAGAGATAAATTTCCTCTAAGGAATAAGTaGAGCTTATCCCAGAATCGCTTGCAAAGAGACTGC +
Preference number: 6 (lower is better)
Translates to: CQPRDKFPLRNK*SLSQNRLQRDC
Trigger: GCAGTCTCTTTGCAAGCGATTCTGGGATAAGCTCAACTTATTCCTTAGAGGAAATTTATCTCTAGGTTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp CTGCTTTCACTTCAGAGTGTTTTGGGCAGTATTCACCCTGGTTTTTaGTGGTTTCAAGACAATCTTTGTACTTACACTTTGTGCCACTCA +
Preference number: 6 (lower is better)
Translates to: LLSLQSVLGSIHPGF*WFQDNLCTYTLCHS
Trigger: TGAGTGGCACAAAGTGTAAGTACAAAGATTGTCTTGAAACCACAAAAAACCAGGGTGAATACTGCCCAAAACACTCTGAAGTGAAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TATATGTCGGATCTCTCTATTGTAGCTTGCGTTGTTGATAATGGTTaGAAATGCCACAATAGGATCCATAAGTTGACCCCAGACCTTAGA +
Preference number: 6 (lower is better)
Translates to: YMSDLSIVACVVDNG*KCHNRIHKLTPDLR
Trigger: TCTAAGGTCTGGGGTCAACTTATGGATCCTATTGTGGCATTTCAAACCATTATCAACAACGCAAGCTACAATAGAGAGATCCGACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp GGAAGATGGAAAATATTTGCTTTCACCAAATGGAACTTTGCAACCTaGCCTGTTGGAATTATTCGGAGACTGAGGATGAAGAACATTGCA +
Preference number: 6 (lower is better)
Translates to: GRWKIFAFTKWNFAT*PVGIIRRLRMKNIA
Trigger: TGCAATGTTCTTCATCCTCAGTCTCCGAATAATTCCAACAGGCAAGGTTGCAAAGTTCCATTTGGTGAAAGCAAATATTTTCCATCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TTTGAAGACTTCTTTTGTGAAACCGTAGTGGCTCTCTaGATACGTGAATTGGGAGTTGAAGTCCTTCTATCA +
Preference number: 6 (lower is better)
Translates to: FEDFFCETVVAL*IRELGVEVLLS
Trigger: TGATAGAAGGACTTCAACTCCCAATTCACGTATTCAGAGAGCCACTACGGTTTCACAAAAGAAGTCTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp TCTATTGTAGCTTGCGTTGTTGATAATGGTTTGAAATaGCACAATAGGATCCATAAGTTGACCCCAGACCTT +
Preference number: 6 (lower is better)
Translates to: SIVACVVDNGLK*HNRIHKLTPDL
Trigger: AAGGTCTGGGGTCAACTTATGGATCCTATTGTGGCATTTCAAACCATTATCAACAACGCAAGCTACAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp TGGTCTTTTCAGGATTATAATTGTATACGATCTGGCTaGAAGTCACCATATCATCCAAATAGGACTCCGGTT +
Preference number: 6 (lower is better)
Translates to: WSFQDYNCIRSG*KSPYHPNRTPV
Trigger: AACCGGAGTCCTATTTGGATGATATGGTGACTTGCAGCCAGATCGTATACAATTATAATCCTGAAAAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp GATCTCTCTATTGTAGCTTGCGTTGTTGATAATGGTTaGAAATGCCACAATAGGATCCATAAGTTGACCCCA +
Preference number: 6 (lower is better)
Translates to: DLSIVACVVDNG*KCHNRIHKLTP
Trigger: TGGGGTCAACTTATGGATCCTATTGTGGCATTTCAAACCATTATCAACAACGCAAGCTACAATAGAGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TCAAAGTCTTGCCCAGTGATGTCAAACAGTGGCATCTCTCCATTATaGTCTACTATATATAACTCATCATCATCTCCAATTTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SKSCPVMSNSGISPL*STIYNSSSSPISAF
Trigger: GAAGGCAGAAATTGGAGATGATGATGAGTTATATATAGTAGACAATAATGGAGAGATGCCACTGTTTGACATCACTGGGCAAGACTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TTTCAGTATTTCAAGAAGAGGAACTCGAAGCTTATTTTCAAAGTCTaGCCCAGTGATGTCAAACAGTGGCATCTCTCCATTATTGTCTAC +
Preference number: 6 (lower is better)
Translates to: FQYFKKRNSKLIFKV*PSDVKQWHLSIIVY
Trigger: GTAGACAATAATGGAGAGATGCCACTGTTTGACATCACTGGGCAAGACTTTGAAAATAAGCTTCGAGTTCCTCTTCTTGAAATACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp ATTTGCTTTAAGCAACTTTGTAGCTCATGGGTTTCCTaGCTAGTCAACTGCCAACCTAGAGATAAATTTCCT +
Preference number: 6 (lower is better)
Translates to: ICFKQLCSSWVS*LVNCQPRDKFP
Trigger: AGGAAATTTATCTCTAGGTTGGCAGTTGACTAGTCAGGAAACCCATGAGCTACAAAGTTGCTTAAAGCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp ACTCAGGATTCTTTCATCATCATCATCATCAGAATCTaGAATAATAATAACCTGTCCACGGGAGGTATCTCC +
Preference number: 6 (lower is better)
Translates to: TQDSFIIIIIRI*NNNNLSTGGIS
Trigger: GGAGATACCTCCCGTGGACAGGTTATTATTATTTCAGATTCTGATGATGATGATGATGAAAGAATCCTGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp TTCAATTTCACAAAATTCTTCAACAGAAATACTCCGTaGTCTTGTGTGTTCTTCAATGCCCTCTGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: FNFTKFFNRNTP*SCVFFNALCSF
Trigger: AAAGGAGCAGAGGGCATTGAAGAACACACAAGACCACGGAGTATTTCTGTTGAAGAATTTTGTGAAATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp ATCCCCTTTCTGGACCATTTCTTGAAGTACAGTCCTTaGGTGTATATGAAGAGATCTCTTTTACAGACTTCT +
Preference number: 6 (lower is better)
Translates to: IPFLDHFLKYSP*VYMKRSLLQTS
Trigger: AGAAGTCTGTAAAAGAGATCTCTTCATATACACCAAAGGACTGTACTTCAAGAAATGGTCCAGAAAGGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp TTTTTGTGGTTTCAAGACAATCTTTGTACTTACACTTaGTGCCACTCAAAGATTCCAACTGAGGCCGACTTA +
Preference number: 6 (lower is better)
Translates to: FLWFQDNLCTYT*CHSKIPTEADL
Trigger: TAAGTCGGCCTCAGTTGGAATCTTTGAGTGGCACAAAGTGTAAGTACAAAGATTGTCTTGAAACCACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp CTTCAGAGTGTTTTGGGCAGTATTCACCCTGGTTTTTaGTGGTTTCAAGACAATCTTTGTACTTACACTTTG +
Preference number: 6 (lower is better)
Translates to: LQSVLGSIHPGF*WFQDNLCTYTL
Trigger: CAAAGTGTAAGTACAAAGATTGTCTTGAAACCACAAAAAACCAGGGTGAATACTGCCCAAAACACTCTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp AAAATATTTGCTTTCACCAAATGGAACTTTGCAACCTaGCCTGTTGGAATTATTCGGAGACTGAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: KIFAFTKWNFAT*PVGIIRRLRMK
Trigger: CTTCATCCTCAGTCTCCGAATAATTCCAACAGGCAAGGTTGCAAAGTTCCATTTGGTGAAAGCAAATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp ATTGTCACCTTCTATAGTGTTATCTGCTTTGATCAATACACTGTCTaGCACTTTCATTGGTTCTTTAGAAAATGTTGGGCTGGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: IVTFYSVICFDQYTV*HFHWFFRKCWAGSF
Trigger: GAAGCTTCCAGCCCAACATTTTCTAAAGAACCAATGAAAGTGCAAGACAGTGTATTGATCAAAGCAGATAACACTATAGAAGGTGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 90 bp TTGATACTATTATTCCTCTGTCACATCCCCTTTCTGGACCATTTCTaGAAGTACAGTCCTTTGGTGTATATGAAGAGATCTCTTTTACAG +
Preference number: 6 (lower is better)
Translates to: LILLFLCHIPFLDHF*KYSPLVYMKRSLLQ
Trigger: CTGTAAAAGAGATCTCTTCATATACACCAAAGGACTGTACTTCAAGAAATGGTCCAGAAAGGGGATGTGACAGAGGAATAATAGTATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TCCACACTATCATCATCTGCTTCCCTCTCCATAGTGTaGAGTATCGATTGCATAAAATCATTTTGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: STLSSSASLSIV*SIDCIKSFCLS
Trigger: AGACAAACAAAATGATTTTATGCAATCGATACTTCACACTATGGAGAGGGAAGCAGATGATGATAGTGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp AATCACACTGGTACTATTACTCATCTCCTCATCTCTTaGTTCAGGTACAGTCATAAGATCTTTAAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: NHTGTITHLLIS*FRYSHKIFKGR
Trigger: TCTCCCTTTAAAGATCTTATGACTGTACCTGAATCAAGAGATGAGGAGATGAGTAATAGTACCAGTGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS TCA 72 bp TTCTGGTACAAATATGTCAGAATTCTGTGCTGTATGTaGCCCTGCTCTTTTAACATCTGTACTTTCACAATC +
Preference number: 6 (lower is better)
Translates to: FWYKYVRILCCM*PCSFNICTFTI
Trigger: GATTGTGAAAGTACAGATGTTAAAAGAGCAGGGTCACATACAGCACAGAATTCTGACATATTTGTACCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CCA 72 bp ACTGTCTTGCACTTTCATTGGTTCTTTAGAAAATGTTaGGCTGGAAGCTTCCAAACAATGCATATCTTTTCT +
Preference number: 6 (lower is better)
Translates to: TVLHFHWFFRKC*AGSFQTMHIFS
Trigger: AGAAAAGATATGCATTGTTTGGAAGCTTCCAGCCCAACATTTTCTAAAGAACCAATGAAAGTGCAAGACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp TTCTTCTTTATTATAAGATGCAGGAGAGATTTTACATaGAGAAGTCAGATCCACAAAAGTGTTACATGGAGG +
Preference number: 6 (lower is better)
Translates to: FFFIIRCRRDFT*RSQIHKSVTWR
Trigger: CCTCCATGTAACACTTTTGTGGATCTGACTTCTGCATGTAAAATCTCTCCTGCATCTTATAATAAAGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS CAA 72 bp AATAACCTGTCCACGGGAGGTATCTCCAACATTATTTaGGTTAGCTGTGAAACATCTTTTATCTTCTTTTAC +
Preference number: 6 (lower is better)
Translates to: NNLSTGGISNII*VSCETSFIFFY
Trigger: GTAAAAGAAGATAAAAGATGTTTCACAGCTAACCAAAATAATGTTGGAGATACCTCCCGTGGACAGGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224140.6
CDS GCA 72 bp ATTTTGCTCATTATTGTCACCTTCTATAGTGTTATCTaGTTTGATCAATACACTGTCTTGCACTTTCATTGG +
Preference number: 6 (lower is better)
Translates to: ILLIIVTFYSVI*FDQYTVLHFHW
Trigger: CCAATGAAAGTGCAAGACAGTGTATTGATCAAAGCAGATAACACTATAGAAGGTGACAATAATGAGCAAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224140.6