RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000145391

Ensembl transcript IDs: ENST00000274031.8, ENST00000404104.7, ENST00000406354.1, ENST00000506866.6, ENST00000515101.1, ENST00000608795.5, ENST00000608958.1

Found 741 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACAGCAGGGGTCTGCAACCTCTGGGCTGCGATGGTACTGGTCCATaGCCTGTTGGGAACTGGGCCACACAGCAGGAGGTGAGCGGCCCC +
Preference number: 1 (lower is better)
Translates to: YSRGLQPLGCDGTGP*PVGNWATQQEVSGP
Trigger: GGGGCCGCTCACCTCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp GGGTCTGCAACCTCTGGGCTGCGATGGTACTGGTCCATGGCCTGTTaGGAACTGGGCCACACAGCAGGAGGTGAGCGGCCCCATGAGCAT +
Preference number: 1 (lower is better)
Translates to: GSATSGLRWYWSMAC*ELGHTAGGERPHEH
Trigger: ATGCTCATGGGGCCGCTCACCTCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp TGGGCCACACAGCAGGAGGTGAGCGGCCCCATGAGCATTGCCACCTaGGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGG +
Preference number: 1 (lower is better)
Translates to: WATQQEVSGPMSIAT*APPPVRAVPLDSHG
Trigger: CCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTGGCAATGCTCATGGGGCCGCTCACCTCCTGCTGTGTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp TATCCTCTACAGCAGGGGTCTGCAACCTCTGGGCTGCGATGGTACTaGTCCATGGCCTGTTGGGAACTGGGCCACACAGCAGGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: YPLQQGSATSGLRWY*SMACWELGHTAGGE
Trigger: CTCACCTCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGAGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 90 bp GAACAGGGAACAGGAGAGGGCAGCTGGGGCTGCTGTTACCCAGGATaGCCAGGCGTTCTCACATATGCAGAGAGAAGAGGAAAGAGAGCC +
Preference number: 1 (lower is better)
Translates to: EQGTGEGSWGCCYPG*PGVLTYAERRGKRA
Trigger: GGCTCTCTTTCCTCTTCTCTCTGCATATGTGAGAACGCCTGGGCATCCTGGGTAACAGCAGCCCCAGCTGCCCTCTCCTGTTCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 90 bp GCGGCTGAGGCACTGGGGAAGCCTACGAGCTCTCTCCACGTCAGGTaGAACAACGCCGAGGAAGTTGCTGAGAGTCAGAGTTATTGTAGG +
Preference number: 1 (lower is better)
Translates to: AAEALGKPTSSLHVR*NNAEEVAESQSYCR
Trigger: CCTACAATAACTCTGACTCTCAGCAACTTCCTCGGCGTTGTTGCACCTGACGTGGAGAGAGCTCGTAGGCTTCCCCAGTGCCTCAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 90 bp CAGCTGGGGCTGCTGTTACCCAGGATGCCCAGGCGTTCTCACATATaGAGAGAGAAGAGGAAAGAGAGCCGGCCAGAGAAAGAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: QLGLLLPRMPRRSHI*REKRKESRPEKEEL
Trigger: CAGCTCTTCTTTCTCTGGCCGGCTCTCTTTCCTCTTCTCTCTGCATATGTGAGAACGCCTGGGCATCCTGGGTAACAGCAGCCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp AAGTCAGAAGGTAGAGATTGCTGGCAAAACTGTGAAGTCCCACCCTaGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTG +
Preference number: 1 (lower is better)
Translates to: KSEGRDCWQNCEVPP*GLNPNSTEGSLPDV
Trigger: CACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGGGACTTCACAGTTTTGCCAGCAATCTCTACCTTCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp ATAGAATATCCTCTACAGCAGGGGTCTGCAACCTCTGGGCTGCGATaGTACTGGTCCATGGCCTGTTGGGAACTGGGCCACACAGCAGGA +
Preference number: 1 (lower is better)
Translates to: IEYPLQQGSATSGLR*YWSMACWELGHTAG
Trigger: TCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGAGGATATTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp CATCGGGGGCATGACCAGCACTATCCTCTCCCTGACCGTATTCCCTaGCCTGGCTGCACAACCCACTTGATCGAGGTTAATGCAAGCCAT +
Preference number: 1 (lower is better)
Translates to: HRGHDQHYPLPDRIP*PGCTTHLIEVNASH
Trigger: ATGGCTTGCATTAACCTCGATCAAGTGGGTTGTGCAGCCAGGTCAGGGAATACGGTCAGGGAGAGGATAGTGCTGGTCATGCCCCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp TTGAAAACTTCGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTaGTGTCAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTG +
Preference number: 1 (lower is better)
Translates to: LKTSCHGVSHELCFL*CQLALLAIMNSGPL
Trigger: CAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACGAAGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp AAGAGAGCCGGCCAGAGAAAGAAGAGCTGGAAGACACAGAGAGTATaGAGAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGC +
Preference number: 1 (lower is better)
Translates to: KRAGQRKKSWKTQRV*RELGGRHGEAQRGC
Trigger: GCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTCTTCATACTCTCTGTGTCTTCCAGCTCTTCTTTCTCTGGCCGGCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 90 bp TCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGATaGTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCAT +
Preference number: 1 (lower is better)
Translates to: STLLPWLRPWVRGFR*CPHLGTFVFPSPTH
Trigger: ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp CTGGGCTTCCCTGGAGTGATCCAGTTCCCTCATTACTTTCATGGCTaGTCCAGCACAGCACAGGTGACTAAACTTGACTTCAGGGGGAAG +
Preference number: 1 (lower is better)
Translates to: LGFPGVIQFPHYFHG*SSTAQVTKLDFRGK
Trigger: CTTCCCCCTGAAGTCAAGTTTAGTCACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCCAGGGAAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp CTTCGCTTTCCAGACCAAACTGACTCAGGTGACAGGAATCACAGCTaGCAGCTACAGATCAGCACAACAGCTGCTCTCCAGTCCTTCCAG +
Preference number: 1 (lower is better)
Translates to: LRFPDQTDSGDRNHS*QLQISTTAALQSFQ
Trigger: CTGGAAGGACTGGAGAGCAGCTGTTGTGCTGATCTGTAGCTGTCAGCTGTGATTCCTGTCACCTGAGTCAGTTTGGTCTGGAAAGCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp AACCATTGGCTTAAGCTTTCAAGCAGGGATCCAACTGGATCTCCCTaGAACCACTGCCACCTAGCTGCAAAGCATGCAACCGGGTGCTCT +
Preference number: 1 (lower is better)
Translates to: NHWLKLSSRDPTGSP*NHCHLAAKHATGCS
Trigger: AGAGCACCCGGTTGCATGCTTTGCAGCTAGGTGGCAGTGGTTTCAGGGAGATCCAGTTGGATCCCTGCTTGAAAGCTTAAGCCAATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp CCCCACCACATGGAATCTTCCACGTCTGCTGTGATTCTGATGCGATaGAATGACCAGATGCAGCGGCTTCCTGACACATTTCCTTCCCCA +
Preference number: 1 (lower is better)
Translates to: PHHMESSTSAVILMR*NDQMQRLPDTFPSP
Trigger: TGGGGAAGGAAATGTGTCAGGAAGCCGCTGCATCTGGTCATTTCATCGCATCAGAATCACAGCAGACGTGGAAGATTCCATGTGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp TTTCCCTGCCACACAGCCTTTCCGGTACCCACACAGTCTTTGGCATaGTCTTTTGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTC +
Preference number: 1 (lower is better)
Translates to: FPCHTAFPVPTQSLA*SFEGDLPPFQWVQV
Trigger: GACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAGGCTGTGTGGCAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 90 bp AGCTACAGATCAGCACAACAGCTGCTCTCCAGTCCTTCCAGCCGCTaGATCGAGGTGTCTAAAAGAGACAAAGCTATGGCATGTGGTGAG +
Preference number: 1 (lower is better)
Translates to: SYRSAQQLLSSPSSR*IEVSKRDKAMACGE
Trigger: CTCACCACATGCCATAGCTTTGTCTCTTTTAGACACCTCGATGCAGCGGCTGGAAGGACTGGAGAGCAGCTGTTGTGCTGATCTGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp CTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTaGAAGGCCTTCGCTTTCCAGACCAAACTGACTCAGGTGACAGGA +
Preference number: 1 (lower is better)
Translates to: LKPSLISWSSLSATA*KAFAFQTKLTQVTG
Trigger: TCCTGTCACCTGAGTCAGTTTGGTCTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp GCCTATGTCCTCACTCTTCTTCCACTGAAGCCTTCTCTCATCAGCTaGAGCTCACTATCTGCTACAGCTTGGAAGGCCTTCGCTTTCCAG +
Preference number: 1 (lower is better)
Translates to: AYVLTLLPLKPSLIS*SSLSATAWKAFAFQ
Trigger: CTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGTGGAAGAAGAGTGAGGACATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp ATCCTCTCCCTGACCGTATTCCCTGACCTGGCTGCACAACCCACTTaGTCGAGGTTAATGCAAGCCATCTTTCTCCTGAAGACAGTCACT +
Preference number: 1 (lower is better)
Translates to: ILSLTVFPDLAAQPT*SRLMQAIFLLKTVT
Trigger: AGTGACTGTCTTCAGGAGAAAGATGGCTTGCATTAACCTCGATCAAGTGGGTTGTGCAGCCAGGTCAGGGAATACGGTCAGGGAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp CCACACAGCCTTTCCGGTACCCACACAGTCTTTGGCATGATCTTTTaGAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTCAACTCATC +
Preference number: 1 (lower is better)
Translates to: PHSLSGTHTVFGMIF*RRFAPVSVGASQLI
Trigger: GATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAGGCTGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 90 bp GAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGATTTaGGTGGAGGTCACAGACACACTGCTGAGTTTTAAGCTCAGAGTG +
Preference number: 1 (lower is better)
Translates to: EDMVRLSVDALLPLI*VEVTDTLLSFKLRV
Trigger: CACTCTGAGCTTAAAACTCAGCAGTGTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTaGACCGGTGTCTCTAATGCCTCTGATTCACTCTCAGGCCCCTCA +
Preference number: 1 (lower is better)
Translates to: ASDSAALQRNCAPDN*TGVSNASDSLSGPS
Trigger: TGAGGGGCCTGAGAGTGAATCAGAGGCATTAGAGACACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp TGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATGGGTaGACCATTGGCTTAAGCTTTCAAGCAGGGATCCAACTGGATCTC +
Preference number: 1 (lower is better)
Translates to: WWAIFLEALTTSSHG*TIGLSFQAGIQLDL
Trigger: GAGATCCAGTTGGATCCCTGCTTGAAAGCTTAAGCCAATGGTTCACCCATGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp TGGTCATGCAGGAGTTGGACTGAGACAGCTCTGAGTGAATCTCCTTaGGATTACAGTGTCGCACACACACATAGGCTCCCGCTGTTTTTC +
Preference number: 1 (lower is better)
Translates to: WSCRSWTETALSESP*DYSVAHTHRLPLFF
Trigger: GAAAAACAGCGGGAGCCTATGTGTGTGTGCGACACTGTAATCTCAAGGAGATTCACTCAGAGCTGTCTCAGTCCAACTCCTGCATGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp GTACTTTTGAGTGACACCTATTATTCCACCTGGGCTTCCCTGGAGTaGTCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCAC +
Preference number: 1 (lower is better)
Translates to: VLLSDTYYSTWASLE*SSSLITFMAGPAQH
Trigger: GTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCCAGGGAAGCCCAGGTGGAATAATAGGTGTCACTCAAAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 90 bp TCTTCTTCCACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTaGTACAGCTTGGAAGGCCTTCGCTTTCCAGACCAAACTGACTCA +
Preference number: 1 (lower is better)
Translates to: SSSTEAFSHQLELTI*YSLEGLRFPDQTDS
Trigger: TGAGTCAGTTTGGTCTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGTGGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp CCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATaGGTGAACCATTGGCTTAAGCTTTCAAGCAGGGATCCAACTGGA +
Preference number: 1 (lower is better)
Translates to: PLVGNLPGSTDNFLS*VNHWLKLSSRDPTG
Trigger: TCCAGTTGGATCCCTGCTTGAAAGCTTAAGCCAATGGTTCACCCATGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp AACTTGACTTCAGGGGGAAGCAATGAGGTTGAAAACTTCGTGTCATaGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTT +
Preference number: 1 (lower is better)
Translates to: NLTSGGSNEVENFVS*GVPRALFPVVSVGF
Trigger: AAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACGAAGTTTTCAACCTCATTGCTTCCCCCTGAAGTCAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp AAGATGACGCATCCTATCTGCTGTCTCATGCTCCCTCTCATCTTCTaGAGACAAAGAAGAGGGAGAGATACGTGTGCCATCAGAAGCTGC +
Preference number: 1 (lower is better)
Translates to: KMTHPICCLMLPLIF*RQRRGRDTCAIRSC
Trigger: GCAGCTTCTGATGGCACACGTATCTCTCCCTCTTCTTTGTCTCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAGGATGCGTCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp TGTCAGACAAGCATCTCAACCCTGACATGTCCAGCACCGAGCTCCTaGACTTCTCTCCCAAACTGGCATTCTTCTCCATCTCAGTTAATG +
Preference number: 1 (lower is better)
Translates to: CQTSISTLTCPAPSS*TSLPNWHSSPSQLM
Trigger: CATTAACTGAGATGGAGAAGAATGCCAGTTTGGGAGAGAAGTCCAGGAGCTCGGTGCTGGACATGTCAGGGTTGAGATGCTTGTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp GCAAAGAAGGGAAGGGCAACTCTGTCAATGTGCCCAAGGGCCACCTaGAATGAAAGTCATGAGCAGCCTGGGATTAAGCACTTTTGTTGT +
Preference number: 1 (lower is better)
Translates to: AKKGRATLSMCPRAT*NESHEQPGIKHFCC
Trigger: ACAACAAAAGTGCTTAATCCCAGGCTGCTCATGACTTTCATTTCAGGTGGCCCTTGGGCACATTGACAGAGTTGCCCTTCCCTTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp AGAACCTCCACTCCCTTGACTTCTTTCCCTACCTACAGAACTCAGTaGATCTCAAGCCTTACTCCGATTCCAACCTGCCACAGAGCCTTA +
Preference number: 1 (lower is better)
Translates to: RTSTPLTSFPTYRTQ*ISSLTPIPTCHRAL
Trigger: TAAGGCTCTGTGGCAGGTTGGAATCGGAGTAAGGCTTGAGATTCACTGAGTTCTGTAGGTAGGGAAAGAAGTCAAGGGAGTGGAGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp AGGAAGCAAGGATTTTTGTTATCGGAGGACGTCTCTCTCTCTGGTTaGAAGTTTGGTGCTTGGGTGCATAGTCTTCCAGAGCTGAGACAG +
Preference number: 1 (lower is better)
Translates to: RKQGFLLSEDVSLSG*KFGAWVHSLPELRQ
Trigger: CTGTCTCAGCTCTGGAAGACTATGCACCCAAGCACCAAACTTCCAACCAGAGAGAGAGACGTCCTCCGATAACAAAAATCCTTGCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 90 bp ACCCTGACATGTCCAGCACCGAGCTCCTGGACTTCTCTCCCAAACTaGCATTCTTCTCCATCTCAGTTAATGGCAAGTTCATCTTTACAG +
Preference number: 1 (lower is better)
Translates to: TLTCPAPSSWTSLPN*HSSPSQLMASSSLQ
Trigger: CTGTAAAGATGAACTTGCCATTAACTGAGATGGAGAAGAATGCCAGTTTGGGAGAGAAGTCCAGGAGCTCGGTGCTGGACATGTCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp TCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTaGCTAAACTTGACTTCAGGGGGAAGCAATGAGGTTGAAAACTTC +
Preference number: 1 (lower is better)
Translates to: SSSLITFMAGPAQHR*LNLTSGGSNEVENF
Trigger: GAAGTTTTCAACCTCATTGCTTCCCCCTGAAGTCAAGTTTAGTCACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp ATATCCAGCACACTCCATGACGAATGTTATCTTTATACTGCCCCTTaGAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTGGACCGT +
Preference number: 1 (lower is better)
Translates to: ISSTLHDECYLYTAP*RSVSHLCHIPGLDR
Trigger: ACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGATAACATTCGTCATGGAGTGTGCTGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR CCA 90 bp TCTCTTTCTGTGGAGCCTTACCTCCAGTCTCTCAGTAAATCCTGTTaGCCCTATCTTCAAAATATACCCAGAATCTGCCCACATCTTACC +
Preference number: 1 (lower is better)
Translates to: SLSVEPYLQSLSKSC*PYLQNIPRICPHLT
Trigger: GGTAAGATGTGGGCAGATTCTGGGTATATTTTGAAGATAGGGCCAACAGGATTTACTGAGAGACTGGAGGTAAGGCTCCACAGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp CTTTCTGGGTGGGTCGTTGGTGATAAGGAAATAGTTTTTCGAGTGTaGAGAACCCCCATAGGGCAAATAGGTTTAACTACAGTCCTAGAC +
Preference number: 1 (lower is better)
Translates to: LSGWVVGDKEIVFRV*RTPIGQIGLTTVLD
Trigger: GTCTAGGACTGTAGTTAAACCTATTTGCCCTATGGGGGTTCTTCACACTCGAAAAACTATTTCCTTATCACCAACGACCCACCCAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp TCAGACAGCCTCAATGCATGGTCTACAGAAATAAATGCAATAAGATaGCGCATCCTATCTGCTGTCTCATGCTCCCTCTCATCTTCTGGA +
Preference number: 1 (lower is better)
Translates to: SDSLNAWSTEINAIR*RILSAVSCSLSSSG
Trigger: TCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAGGATGCGTCATCTTATTGCATTTATTTCTGTAGACCATGCATTGAGGCTGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp ATGGAAGTTGGATCATATCATTCCTCTAGTTACTGTCTCAGAGTATaGGTCAAACTCTTACAAATAATGGGGCCAGGCAGGGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: MEVGSYHSSSYCLRV*VKLLQIMGPGRVAH
Trigger: GTGAGCCACCCTGCCTGGCCCCATTATTTGTAAGAGTTTGACTCATACTCTGAGACAGTAACTAGAGGAATGATATGATCCAACTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 90 bp TGCATGGTCTACAGAAATAAATGCAATAAGATGACGCATCCTATCTaGTGTCTCATGCTCCCTCTCATCTTCTGGAGACAAAGAAGAGGG +
Preference number: 1 (lower is better)
Translates to: CMVYRNKCNKMTHPI*CLMLPLIFWRQRRG
Trigger: CCCTCTTCTTTGTCTCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAGGATGCGTCATCTTATTGCATTTATTTCTGTAGACCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp TCACTAAAAACCTCCCAAACAGCTCAAGATTTAAGTTGTCTCTTCTaGATGTCCATTTGGTGGAAAACCCACCCAGTCATCTCATGCTGC +
Preference number: 1 (lower is better)
Translates to: SLKTSQTAQDLSCLF*MSIWWKTHPVISCC
Trigger: GCAGCATGAGATGACTGGGTGGGTTTTCCACCAAATGGACATCCAGAAGAGACAACTTAAATCTTGAGCTGTTTGGGAGGTTTTTAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp TACATCCATTACACACTAACTCCATTCCCTTTTTCCCCTAGCCCTTaGCAACCACCCTCCCTTCTACTTTCAGTTTCTATAAATGTGACT +
Preference number: 1 (lower is better)
Translates to: YIHYTLTPFPFSPSP*QPPSLLLSVSINVT
Trigger: AGTCACATTTATAGAAACTGAAAGTAGAAGGGAGGGTGGTTGCCAAGGGCTAGGGGAAAAAGGGAATGGAGTTAGTGTGTAATGGATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp AAGCAGATGTCACTGCCTTTCCCACATCATAAGAGGGGAGTGACATaGAAAGTGCACAATCTTGTTACAGGAAACTGCATAGGAAATTTC +
Preference number: 1 (lower is better)
Translates to: KQMSLPFPHHKRGVT*KVHNLVTGNCIGNF
Trigger: GAAATTTCCTATGCAGTTTCCTGTAACAAGATTGTGCACTTTTCATGTCACTCCCCTCTTATGATGTGGGAAAGGCAGTGACATCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 90 bp CACAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTaGGTAATATATCCAGCACACTCCATGACGAATGTTATCTTTATA +
Preference number: 1 (lower is better)
Translates to: HSMLLSSRVNSHTAY*VIYPAHSMTNVIFI
Trigger: TATAAAGATAACATTCGTCATGGAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR TCA 90 bp AGAATAGGTACTACAAGACTCAAGAACTCCTCACTGCTTTCTTTTTaGTCCCATCATTCCTTTGTGTCGGAAATTCAGTCTTTCCAGTTG +
Preference number: 1 (lower is better)
Translates to: RIGTTRLKNSSLLSF*SHHSFVSEIQSFQL
Trigger: CAACTGGAAAGACTGAATTTCCGACACAAAGGAATGATGGGATCAAAAAGAAAGCAGTGAGGAGTTCTTGAGTCTTGTAGTACCTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 90 bp ATCTTTACAGTTGCTCAGATTAAAATAAGAGTCACTGTAGTGAGTTaGATCATGGCTCACAAAAAGGTATGTCCACATCCTAACGCCAGG +
Preference number: 1 (lower is better)
Translates to: IFTVAQIKIRVTVVS*IMAHKKVCPHPNAR
Trigger: CCTGGCGTTAGGATGTGGACATACCTTTTTGTGAGCCATGATTCAACTCACTACAGTGACTCTTATTTTAATCTGAGCAACTGTAAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 90 bp CTCCTTATTTCTGCAGTTGTGATTACACATGGCTGGCAAAATGGCTaGAATGCTATTGATAGTGTTGCTTTTAAACTATACAGGTGTTCA +
Preference number: 1 (lower is better)
Translates to: LLISAVVITHGWQNG*NAIDSVAFKLYRCS
Trigger: TGAACACCTGTATAGTTTAAAAGCAACACTATCAATAGCATTTCAGCCATTTTGCCAGCCATGTGTAATCACAACTGCAGAAATAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 90 bp GTTAGAATTCAAATTTGCTGTTTGACTTTTGAATTCAATGCACTGTaGCACAAGCCTGACCGCGCTATGTTATGTACATTTAATGTGTAC +
Preference number: 1 (lower is better)
Translates to: VRIQICCLTFEFNAL*HKPDRAMLCTFNVY
Trigger: GTACACATTAAATGTACATAACATAGCGCGGTCAGGCTTGTGGCACAGTGCATTGAATTCAAAAGTCAAACAGCAAATTTGAATTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 90 bp CATAGGAAATTTCAACTTTTACTTGAATGCCCAGTTCTGAAAATTTaGTACTGTGAGTTGATCACTCCTTTCTCCTTAAAGCAGTTCCCT +
Preference number: 1 (lower is better)
Translates to: HRKFQLLLECPVLKI*YCELITPFSLKQFP
Trigger: AGGGAACTGCTTTAAGGAGAAAGGAGTGATCAACTCACAGTAGCAAATTTTCAGAACTGGGCATTCAAGTAAAAGTTGAAATTTCCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTGCACTATCCTCTCCCTaGCCGTATTCCCTGACCTGG +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCALSSP*PYSLTW
Trigger: CCAGGTCAGGGAATACGGTCAGGGAGAGGATAGTGC...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTGATGCAGCGGCTTCCTaGCACATTTCCTTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCDAAAS*HISFPS
Trigger: GCTGGGGAAGGAAATGTGTCAGGAAGCCGCTGCATC...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGAACACACCCACCACCCTaGTGCCTCTCTCCCCCGGCA +
Preference number: 2 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRTHPPP*CLSPPA
Trigger: TGCCGGGGGAGAGAGGCAGCAGGGTGGTGGGTGTGT...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 90 bp CATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTaGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: HGVSHELCFLWCQLA*LAIMNSGPLLGRAE
Trigger: CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTTCTATTCCAGGTCTCTaGACCCCAAAGCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCSIPGL*TPKPGL
Trigger: AAGGCCTGGCTTTGGGGTTCAGAGACCTGGAATAGA...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTTGCCCAAGGGCCACCTaGAATGAAAGTCATGAGCAG +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCCPRAT*NESHEQ
Trigger: CTGCTCATGACTTTCATTTCAGGTGGCCCTTGGGCA...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCCCACCAGGAAGCGGCTaGGGCACTGGGGAAGCCTAC +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSPPGSG*GTGEAY
Trigger: GTAGGCTTCCCCAGTGCCTCAGCCGCTTCCTGGTGG...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CAA 90 bp GCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTaGCAGGCTTCTAGGTTAGAGCAAACCTTTTCCCTGCCACACAGC +
Preference number: 2 (lower is better)
Translates to: AIMNSGPLLGRAEGT*QASRLEQTFSLPHS
Trigger: GCTGTGTGGCAGGGAAAAGGTTTGCTCTAACCTAGAAGCCTGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 90 bp TCGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTaGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGT +
Preference number: 2 (lower is better)
Translates to: SCHGVSHELCFLWCQ*ALLAIMNSGPLLGR
Trigger: ACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTATGCATTGCTTCCTCTaGTTTGCGTGGAGGTCACAG +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCMHCFL*FAWRSQ
Trigger: CTGTGACCTCCACGCAAATCAGAGGAAGCAATGCAT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAGTAAGGGTGGCGGTTaGTGGCGGCCGGGAAACCGA +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSSKGGG*WRPGNR
Trigger: TCGGTTTCCCGGCCGCCATCAACCGCCACCCTTACT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCAAGCAAACCTTTTCCCTaGCACACAGCCTTTCCGGTA +
Preference number: 2 (lower is better)
Translates to: AGHNELGPAAWACRGDLASKPFP*HTAFPV
Trigger: TACCGGAAAGGCTGTGTGGCAGGGAAAAGGTTTGCT...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTACTCCGATTCCAACCTaGCACAGAGCCTTACATTTG +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCTPIPT*HRALHL
Trigger: CAAATGTAAGGCTCTGTGGCAGGTTGGAATCGGAGT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACTGCAACCTCTGGGCTaGGATGGTACTGGTCCATGG +
Preference number: 2 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRLQPLG*DGTGPW
Trigger: CCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTCCTTCTCTCATCAGCTaGAGCTCACTATCTGCTACA +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCPSLIS*SSLSAT
Trigger: TGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGG...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTATAGTTTTTCGAGTGTaGAGAACCCCCATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCIVFRV*RTPIGQ
Trigger: TTGCCCTATGGGGGTTCTTCACACTCGAAAAACTAT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCAGCTACCTGCTTGGGCTaGGCTCTCAGCATCTCTTGC +
Preference number: 2 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPATCLG*ALSISC
Trigger: GCAAGAGATGCTGAGAGCTCAGCCCAAGCAGGTAGC...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGCCACTGCCACCTAGCTaGAAAGCATGCAACCGGGTG +
Preference number: 2 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLPLPPS*KACNRV
Trigger: CACCCGGTTGCATGCTTTGCAGCTAGGTGGCAGTGG...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTAGGCGTTCTCACATATaGAGAGAGAAGAGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCRRSHI*REKRKE
Trigger: CTCTTTCCTCTTCTCTCTGCATATGTGAGAACGCCT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCCCAGCACAGCACAGGTaGCTAAACTTGACTTCAGGG +
Preference number: 2 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLPAQHR*LNLTSG
Trigger: CCCTGAAGTCAAGTTTAGTCACCTGTGCTGTGCTGG...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCCTGGTCTTGAACTCCTaGTCTCAGGTGACCCACTTG +
Preference number: 2 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLLVLNS*SQVTHL
Trigger: CAAGTGGGTCACCTGAGATCAGGAGTTCAAGACCAG...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATACCCACACAGTCTTTaGCATGATCTTTTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: AGHNELGPAAWACRGDLAYPHSL*HDLLKE
Trigger: CTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTTTTCCCCTAGCCCTTaGCAACCACCCTCCCTTCTA +
Preference number: 2 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLFSPSP*QPPSLL
Trigger: TAGAAGGGAGGGTGGTTGCCAAGGGCTAGGGGAAAA...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCTGTGACGTCACAGCATaGGCAGTCCCTGGTTGTCCC +
Preference number: 2 (lower is better)
Translates to: TEAFSHQLELTICYSLEGCDVTA*AVPGCP
Trigger: GGGACAACCAGGGACTGCTCATGCTGTGACGTCACA...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGCATGGTGAGAGGATGTaGCGTCACAGCATGAGCAGT +
Preference number: 2 (lower is better)
Translates to: PEALAHPSQCIERSLSTEHGERM*RHSMSS
Trigger: ACTGCTCATGCTGTGACGTCACATCCTCTCACCATG...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCTCTGATGCGATGAAATaGCCAGATGCAGCGGCTTCC +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSSDAMK*PDAAAS
Trigger: GGAAGCCGCTGCATCTGGTCATTTCATCGCATCAGA...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCTTGCCCCCGTTTCAGTaGGTGCAAGTCAACTCATCA +
Preference number: 2 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCLPPFQ*VQVNSS
Trigger: TGATGAGTTGACTTGCACCCACTGAAACGGGGGCAA...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCCCCTCATTACTTTCATaGCTGGTCCAGCACAGCACA +
Preference number: 2 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLPSLLS*LVQHST
Trigger: TGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGG...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 90 bp GAAGAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATaGCTTCCTCTGATTTGCGTGGAGGTCACAGACACACTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: EESWEEDMVRLSVDA*LPLICVEVTDTLLS
Trigger: ACTCAGCAGTGTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGGACAGGAATCACAGCTaGCAGCTACAGATCAGCACA +
Preference number: 2 (lower is better)
Translates to: PEALAHPSQCIERSLSTEDRNHS*QLQIST
Trigger: TGTGCTGATCTGTAGCTGTCAGCTGTGATTCCTGTC...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTCTTAAGACAGAAGCTTaGGGCAACTGTTTTAAAACA +
Preference number: 2 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCLKTEA*GNCFKT
Trigger: TGTTTTAAAACAGTTGCCTCAAGCTTCTGTCTTAAG...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCCTTACAAGGGACAGGTaGCACAGAAAAGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLLTRDR*HRKEEK
Trigger: CTTCTCCTCTTTTCTGTGTCACCTGTCCCTTGTAAG...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGAGTCCTTCCAGCCGCTaGATCGAGGTGTCTAAAAGA +
Preference number: 2 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLSPSSR*IEVSKR
Trigger: TCTTTTAGACACCTCGATGCAGCGGCTGGAAGGACT...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCCTGGAGCTCACTATCTaGTACAGCTTGGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSLELTI*YSLEGL
Trigger: AAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAG...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACTATCTGCTGTCTCATaGTCCCTCTCATCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRLSAVS*SLSSSG
Trigger: TCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACTGTCTCTCTGCTGCTaGTTACCTTTTCAGCCACAA +
Preference number: 2 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRLSLCC*LPFQPQ
Trigger: TTGTGGCTGAAAAGGTAAGCAGCAGCAGAGAGACAG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGTCTACAGCAGGGGTCTaGAACCTCTGGGCTGCGATG +
Preference number: 2 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKSTAGV*NLWAAM
Trigger: CATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGA...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGATTCAAGAGGGCCAATTaGACTTCTAGTGCCTGCAGT +
Preference number: 2 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRFKRAN*TSSACS
Trigger: ACTGCAGGCACTAGAAGTGCAATTGGCCCTCTTGAA...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCAAGTCCAGAGGCCCTaGCCCATCCGTCACAGTGTA +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGQVQRP*PIRHSV
Trigger: TACACTGTGACGGATGGGCCAGGGCCTCTGGACTTG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCGTGAGCCACCGCGCCTaGCCCATACTAACCATTTTT +
Preference number: 2 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECVSHRA*PILTIF
Trigger: AAAAATGGTTAGTATGGGCCAGGCGCGGTGGCTCAC...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTaGGAAGGCCTTCGCTTTCCAGACCAAACTGACTCAGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: TEAFSHQLELTICYS*EGLRFPDQTDSGDR
Trigger: CCTGTCACCTGAGTCAGTTTGGTCTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTCACTCTTCTTCCACTaGAGCCTTCTCTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLSLFFH*SLLSSA
Trigger: AGCTGATGAGAGAAGGCTTCAGTGGAAGAAGAGTGA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCGAATTCAATGCACTGTaGCACAAGCCTGACCGCGCT +
Preference number: 2 (lower is better)
Translates to: TEAFSHQLELTICYSLEGEFNAL*HKPDRA
Trigger: AGCGCGGTCAGGCTTGTGGCACAGTGCATTGAATTC...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGAGTATGAAGAGAGTTaGGAGGAAGACATGGTGAGG +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSEYEES*EEDMVR
Trigger: CCTCACCATGTCTTCCTCCCAACTCTCTTCATACTC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAAGCCTCCTGTGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKSLLCS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACACAGGAGGCT...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 90 bp GCCACACAGCCTTTCCGGTACCCACACAGTCTTTGGCATGATCTTTaGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTCAACTCAT +
Preference number: 2 (lower is better)
Translates to: ATQPFRYPHSLWHDL*KEICPRFSGCKSTH
Trigger: ATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAGGCTGTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCACTTCCTCTCATGGGTaGACCATTGGCTTAAGCTTT +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSTSSHG*TIGLSF
Trigger: AAAGCTTAAGCCAATGGTTCACCCATGAGAGGAAGT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAAAGGTGAGATCCCTGTaGCTAGGGAACTGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKKVRSL*LGNWGD
Trigger: ATCTCCCCAGTTCCCTAGTCACAGGGATCTCACCTT...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACCCCATTCATGTTTCTaGCTCAGGGCCTTTGCACTG +
Preference number: 2 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKPHSCF*LRAFAL
Trigger: CAGTGCAAAGGCCCTGAGGCAGAAACATGAATGGGG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTCATGGGTGAACCATTaGCTTAAGCTTTCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLSWVNH*LKLSSR
Trigger: CCTGCTTGAAAGCTTAAGCCAATGGTTCACCCATGA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CAA 90 bp TACTGTGAGTTGATCACTCCTTTCTCCTTAAAGCAGTTCCCTCCCTaGCCTTCTAGGACCTCACACTCTGCTGTTTTGCCTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: YCELITPFSLKQFPP*PSRTSHSAVLPPLS
Trigger: GGAGAGAGGAGGCAAAACAGCAGAGTGTGAGGTCCTAGAAGGCAAGGGAGGGAACTGCTTTAAGGAGAAAGGAGTGATCAACTCACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCAATAGGGCTGAGGGGTaGAATGACTTTAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: TEAFSHQLELTICYSLEGNRAEG*NDFRSG
Trigger: CCCACTTCTAAAGTCATTTCACCCCTCAGCCCTATT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGAACACAGTCTTTGGCATaGTCTTTTGAAGGAGATTTG +
Preference number: 2 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRTQSLA*SFEGDL
Trigger: CAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGT...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATTGGGCTTCCCTGGAGTaGTCCAGTTCCCTCATTACT +
Preference number: 2 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHWASLE*SSSLIT
Trigger: AGTAATGAGGGAACTGGATCACTCCAGGGAAGCCCA...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACTTTTGAAGGAGATTTaGCCCCGTTTCAGTGGGTGC +
Preference number: 2 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKLLKEI*PRFSGC
Trigger: GCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCTATCTGCTACAGCTTaGAAGGCCTTCGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGLSATA*KAFAFQ
Trigger: CTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTAAGCAGGGATCCAACTaGATCTCCCTGAAACCACTG +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGKQGSN*ISLKPL
Trigger: CAGTGGTTTCAGGGAGATCCAGTTGGATCCCTGCTT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTCAGCATCTCTTGCCTaGAGTATTGCAGTCCTACTA +
Preference number: 2 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECSASLA*SIAVLL
Trigger: TAGTAGGACTGCAATACTCCAGGCAAGAGATGCTGA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCGCCATTAGATTCTCATaGGAATGCAAACCCTATTGT +
Preference number: 2 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLAIRFS*ECKPYC
Trigger: ACAATAGGGTTTGCATTCCCATGAGAATCTAATGGC...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAGTTGCTAACGCATGGTaGGAGGATGTGACGTCACAG +
Preference number: 2 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSVANAW*EDVTSQ
Trigger: CTGTGACGTCACATCCTCTCACCATGCGTTAGCAAC...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAACTGTGCCACAAGCCTaGCCGCGCTATGTTATGTAC +
Preference number: 2 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSTVPQA*PRYVMY
Trigger: GTACATAACATAGCGCGGTCAGGCTTGTGGCACAGT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCTTATTTCTGCAGTTGTaGTTACACATGGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSLFLQL*LHMAGK
Trigger: TTTGCCAGCCATGTGTAATCACAACTGCAGAAATAA...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCTGAGTGAATCTCCTTaGGATTACAGTGTCGCACAC +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGLSESP*DYSVAH
Trigger: GTGTGCGACACTGTAATCTCAAGGAGATTCACTCAG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAGCTGTACTTTTGAGTaGCACCTATTATTCCACCTG +
Preference number: 2 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECSCTFE*HLLFHL
Trigger: CAGGTGGAATAATAGGTGTCACTCAAAAGTACAGCT...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAAAGCATGCAACCGGGTaGTCTAGGAAGCCTGGTGTT +
Preference number: 2 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSKHATG*SRKPGV
Trigger: AACACCAGGCTTCCTAGAGCACCCGGTTGCATGCTT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAAGGGAGAGATACGTGTaGCATCAGAAGCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKRERYV*HQKLHF
Trigger: AAAGTGCAGCTTCTGATGGCACACGTATCTCTCCCT...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCTGGCATCTCCGAATGTaGTACAGATTTAGACTTGAA +
Preference number: 2 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSWHLRM*YRFRLE
Trigger: TTCAAGTCTAAATCTGTACCACATTCGGAGATGCCA...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTTATTTCTCTTTCTGTaGAGCCTTACCTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECLFLFL*SLTSSL
Trigger: GAGACTGGAGGTAAGGCTCCACAGAAAGAGAAATAA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGAAAGCAATGTGCAACTaGCAAGAAATAGCAAACTTC +
Preference number: 2 (lower is better)
Translates to: PEALAHPSQCIERSLSTEKAMCN*QEIANF
Trigger: GAAGTTTGCTATTTCTTGTCAGTTGCACATTGCTTT...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTTTCACTTAGCATCATaGCTTCAATGTTCATCCACG +
Preference number: 2 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECFHLAS*LQCSST
Trigger: CGTGGATGAACATTGAAGGCATGATGCTAAGTGAAA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTAAAGAGACAAAGCTATaGCATGTGGTGAGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGKETKL*HVVRVL
Trigger: AAGCACCCTCACCACATGCCATAGCTTTGTCTCTTT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATCTCCCTCTCATCTTCTaGAGACAAAGAAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHLPLIF*RQRRGR
Trigger: TCTCCCTCTTCTTTGTCTCCAGAAGATGAGAGGGAG...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGGGAGGAAGACATGGTaGGGCTCAGCGTGGATGCAT +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQGRKTW*GSAWMH
Trigger: ATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATTTTGGCATGATCTTTTaGAGGAGATTTGCCCCCGTT +
Preference number: 2 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHFGMIF*RRFAPV
Trigger: AACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAA...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCCTGTCTTATGTCAAATaGTCGACAATACCTCTCAGT +
Preference number: 2 (lower is better)
Translates to: TEAFSHQLELTICYSLEGLSYVK*STIPLS
Trigger: ACTGAGAGGTATTGTCGAGCATTTGACATAAGACAG...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTTAATACGGCACATATaGAAGTGTGCTAACACAATT +
Preference number: 2 (lower is better)
Translates to: PEALAHPSQCIERSLSTELIRHI*KCANTI
Trigger: AATTGTGTTAGCACACTTGCATATGTGCCGTATTAA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGAGAAATGGGCCCCTTaGCAGATGCTCCCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQEKWAP*QMLPSP
Trigger: AGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTCCCCGTTTCAGTGGGTaGAAGTCAACTCATCATTCC +
Preference number: 2 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLPRFSG*KSTHHS
Trigger: GGAATGATGAGTTGACTTGCACCCACTGAAACGGGG...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCATTAAGGATTTCATGGTaGAATCATCCTGGATTATCT +
Preference number: 2 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPLRISW*NHPGLS
Trigger: AGATAATCCAGGATGATTCCACCATGAAATCCTTAA...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp GAACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTGGGAAGCCTATGTTCTaGCAATTGCCATTATCAGTA +
Preference number: 2 (lower is better)
Translates to: ELVLITQLKSLSTCGQSGGKPMF*QLPLSV
Trigger: TACTGATAATGGCAATTGTCAGAACATAGGCTTCCC...ACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
3UTR-3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGAAATTTACGAAAAGTaGCACATACTGTCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGEIYEK*HILSPG
Trigger: TCCAGGAGACAGTATGTGGCACTTTTCGTAAATTTC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTTCAGTCTAATCATTTaGCATCTCCGAATGTGGTAC +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGFSLII*HLRMWY
Trigger: GTACCACATTCGGAGATGCCAAATGATTAGACTGAA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTCTATAATAATACCCTaGCCCTATGAGCCAGTACTT +
Preference number: 2 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGSIIIP*PYEPVL
Trigger: AAGTACTGGCTCATAGGGCCAGGGTATTATTATAGA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp CAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTAATATATCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: QYVTFQQSEQSHGLLGNISVSYS*AGPFSS
Trigger: AGAGCTGAACGGTCCAGCCCAGGAATATGACACAGA...TATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR-3UTR CCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAGACAGCCTCAATGCATaGTCTACAGAAATAAATGCA +
Preference number: 2 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKDSLNA*STEINA
Trigger: TGCATTTATTTCTGTAGACCATGCATTGAGGCTGTC...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp GAGTCACAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTATCCAGCACACTCCATaGCGAATGTTATCTTTATAC +
Preference number: 2 (lower is better)
Translates to: ESQYVTFQQSEQSHGLLGIQHTP*RMLSLY
Trigger: GTATAAAGATAACATTCGTCATGGAGTGTGCTGGAT...ACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTGTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTTGCTGTTACCCAGGATaGCCAGGCGTTCTCACATAT +
Preference number: 2 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRCCYPG*PGVLTY
Trigger: ATATGTGAGAACGCCTGGGCATCCTGGGTAACAGCA...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp GAGTCACAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTATGTTATCTTTATACTaGCCCTTGAAGATCAGTCTC +
Preference number: 2 (lower is better)
Translates to: ESQYVTFQQSEQSHGLLGMLSLY*PLKISL
Trigger: GAGACTGATCTTCAAGGGGCAGTATAAAGATAACAT...ACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTGTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR CAA 90 bp TCCCATCATTCCTTTGTGTCGGAAATTCAGTCTTTCCAGTTGTTTTaGTTAGTCCATTCAAATGTCCATTTGGGGACATGCTCCTACAGG +
Preference number: 2 (lower is better)
Translates to: SHHSFVSEIQSFQLF*LVHSNVHLGTCSYR
Trigger: CCTGTAGGAGCATGTCCCCAAATGGACATTTGAATGGACTAACAAAAACAACTGGAAAGACTGAATTTCCGACACAAAGGAATGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CAA 90 bp CAACTTTTACTTGAATGCCCAGTTCTGAAAATTTGCTACTGTGAGTaGATCACTCCTTTCTCCTTAAAGCAGTTCCCTCCCTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: QLLLECPVLKICYCE*ITPFSLKQFPPLPS
Trigger: AGAAGGCAAGGGAGGGAACTGCTTTAAGGAGAAAGGAGTGATCAACTCACAGTAGCAAATTTTCAGAACTGGGCATTCAAGTAAAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGACCTACAGAACTCAGTaGATCTCAAGCCTTACTCCG +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQTYRTQ*ISSLTP
Trigger: CGGAGTAAGGCTTGAGATTCACTGAGTTCTGTAGGT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTTCAGGGCCTTTGCACTaGCTTTTTATTTTGTCTGAA +
Preference number: 2 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLSGPLH*LFILSE
Trigger: TTCAGACAAAATAAAAAGTCAGTGCAAAGGCCCTGA...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTTTGCTTCCTCTGATTTaGGTGGAGGTCACAGACACA +
Preference number: 2 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRLLPLI*VEVTDT
Trigger: TGTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAA...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGTCCATTTGGGGACATaGTCCTACAGGTTAGTTCCT +
Preference number: 2 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRVHLGT*SYRLVP
Trigger: AGGAACTAACCTGTAGGAGCATGTCCCCAAATGGAC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGAGCATGAGCAGTCCCTaGTTGTCCCATTGTCAGATA +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQSMSSP*LSHCQI
Trigger: TATCTGACAATGGGACAACCAGGGACTGCTCATGCT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATTTGTTGTTTTGTGACTaGCTTATTTCACTTAGCATC +
Preference number: 2 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHLLFCD*LISLSI
Trigger: GATGCTAAGTGAAATAAGCCAGTCACAAAACAACAA...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGAAGACACAGAGAGTATaGAGAGAGTTGGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQKTQRV*RELGGR
Trigger: TCTTCCTCCCAACTCTCTTCATACTCTCTGTGTCTT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGATAGTCTTCCAGAGCTaGGACAGGAAATGTACTGTG +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQIVFQS*DRKCTV
Trigger: CACAGTACATTTCCTGTCTCAGCTCTGGAAGACTAT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATATACTTTCCAGCAGAGTaGACAGTCACACGGCTTACT +
Preference number: 2 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYIYFPAE*TVTRLT
Trigger: AGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTA...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR-3UTR CCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTATTCAGTTCCTTTGGTaGGCAATCTTCCTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRIQFLW*AIFLEA
Trigger: TGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAAT...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGAAGGTAGAGATTGCTaGCAAAACTGTGAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQEGRDC*QNCEVP
Trigger: TGGGACTTCACAGTTTTGCCAGCAATCTCTACCTTC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CAA 90 bp TCATTATCATTCACTAAAAACCTCCCAAACAGCTCAAGATTTAAGTaGTCTCTTCTGGATGTCCATTTGGTGGAAAACCCACCCAGTCAT +
Preference number: 2 (lower is better)
Translates to: SLSFTKNLPNSSRFK*SLLDVHLVENPPSH
Trigger: ATGACTGGGTGGGTTTTCCACCAAATGGACATCCAGAAGAGACAACTTAAATCTTGAGCTGTTTGGGAGGTTTTTAGTGAATGATAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR TCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGGCTGGCAAAATGGCTaGAATGCTATTGATAGTGTT +
Preference number: 2 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRGWQNG*NAIDSV
Trigger: AACACTATCAATAGCATTTCAGCCATTTTGCCAGCC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCTATCTAATCAAGTCCTaGTGGTTTGAGGGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: SVWFYLHPHFTSLISHISYLIKS*WFEGLF
Trigger: AAAAAGACCCTCAAACCAGCAGGACTTGATTAGATA...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
3UTR-3UTR CCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTACTATTCAGTTCCTTTaGTGGGCAATCTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRTIQFL*WAIFLE
Trigger: TTCCAGGAAGATTGCCCACCAAAGGAACTGAATAGT...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGCCTACACACTGCTATTaGTGCAAAAATCCATTTGGA +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQPTHCY*CKNPFG
Trigger: TCCAAATGGATTTTTGCATCAATAGCAGTGTGTAGG...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGAGTTGTGATTACACATaGCTGGCAAAATGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQSCDYT*LAKWLK
Trigger: TTTCAGCCATTTTGCCAGCCATGTGTAATCACAACT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR GCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTTTTCTCCTTATTTCTaGAGTTGTGATTACACATGG +
Preference number: 2 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQFSPYF*SCDYTW
Trigger: CCATGTGTAATCACAACTGCAGAAATAAGGAGAAAA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CAA 90 bp AAGCCAGTGGAATTTGGGGAGTTTTTCACTTGTCAAATTGTTGTCTaGGTTCCTGAAGTGATTATACTATGCTCTGGTAATCATTTAAAA +
Preference number: 2 (lower is better)
Translates to: KPVEFGEFFTCQIVV*VPEVIILCSGNHLK
Trigger: TTTTAAATGATTACCAGAGCATAGTATAATCACTTCAGGAACCAAGACAACAATTTGACAAGTGAAAAACTCCCCAAATTCCACTGGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp GGCTGCGATGGTACTGGTCCATGGCCTGTTGGGAACTaGGCCACACAGCAGGAGGTGAGCGGCCCCATGAGC +
Preference number: 3 (lower is better)
Translates to: GCDGTGPWPVGN*ATQQEVSGPMS
Trigger: GCTCATGGGGCCGCTCACCTCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp ACCTCTGGGCTGCGATGGTACTGGTCCATGGCCTGTTaGGAACTGGGCCACACAGCAGGAGGTGAGCGGCCC +
Preference number: 3 (lower is better)
Translates to: TSGLRWYWSMAC*ELGHTAGGERP
Trigger: GGGCCGCTCACCTCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp GGTCTGCAACCTCTGGGCTGCGATGGTACTGGTCCATaGCCTGTTGGGAACTGGGCCACACAGCAGGAGGTG +
Preference number: 3 (lower is better)
Translates to: GLQPLGCDGTGP*PVGNWATQQEV
Trigger: CACCTCCTGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CAGCAGGGGTCTGCAACCTCTGGGCTGCGATGGTACTaGTCCATGGCCTGTTGGGAACTGGGCCACACAGCA +
Preference number: 3 (lower is better)
Translates to: QQGSATSGLRWY*SMACWELGHTA
Trigger: TGCTGTGTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CCTCTACAGCAGGGGTCTGCAACCTCTGGGCTGCGATaGTACTGGTCCATGGCCTGTTGGGAACTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: PLQQGSATSGLR*YWSMACWELGH
Trigger: GTGGCCCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTCATTCAAATGTCCATTaGGGGACATGCTCCTACAGG +
Preference number: 3 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCHSNVH*GTCSYR
Trigger: CCTGTAGGAGCATGTCCCCAAATGGACATTTGAATG...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTACAACGCCGAGGAAGTaGCTGAGAGTCAGAGTTATT +
Preference number: 3 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCTTPRK*LRVRVI
Trigger: AATAACTCTGACTCTCAGCAACTTCCTCGGCGTTGT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp GCACTGGGGAAGCCTACGAGCTCTCTCCACGTCAGGTaGAACAACGCCGAGGAAGTTGCTGAGAGTCAGAGT +
Preference number: 3 (lower is better)
Translates to: ALGKPTSSLHVR*NNAEEVAESQS
Trigger: ACTCTGACTCTCAGCAACTTCCTCGGCGTTGTTGCACCTGACGTGGAGAGAGCTCGTAGGCTTCCCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp AATATCCTCTACAGCAGGGGTCTGCAACCTCTGGGCTaGGATGGTACTGGTCCATGGCCTGTTGGGAACTGG +
Preference number: 3 (lower is better)
Translates to: NILYSRGLQPLG*DGTGPWPVGNW
Trigger: CCAGTTCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGAGGATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATaGGTCCGTGGCTTTAGATGCTGTCCACATCTGGGA +
Preference number: 3 (lower is better)
Translates to: SPLSTLLPWLRP*VRGFRCCPHLG
Trigger: TCCCAGATGTGGACAGCATCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTGATCCCATCATTCCTTaGTGTCGGAAATTCAGTCTT +
Preference number: 3 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCDPIIP*CRKFSL
Trigger: AAGACTGAATTTCCGACACAAAGGAATGATGGGATC...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp AACCACTGCCACCTAGCTGCAAAGCATGCAACCGGGTaGTCTAGGAAGCCTGGTGTTGCAAAGAAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: NHCHLAAKHATG*SRKPGVAKKGR
Trigger: CCTTCCCTTCTTTGCAACACCAGGCTTCCTAGAGCACCCGGTTGCATGCTTTGCAGCTAGGTGGCAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp AAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATaGTCCCCTCTCCTTCCTCTCTGCGAGGCAGAAGTC +
Preference number: 3 (lower is better)
Translates to: KCTVLRNGPLAR*SPLLPLCEAEV
Trigger: GACTTCTGCCTCGCAGAGAGGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTAGACAGTCACTCCCTTaGGGCACATTTAAATTAAAG +
Preference number: 3 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCRQSLP*GTFKLK
Trigger: CTTTAATTTAAATGTGCCCAAAGGGAGTGACTGTCT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCTTACATTTGGCCTCATaGGCCTTTCTGGGTGGGTCG +
Preference number: 3 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSLHLAS*AFLGGS
Trigger: CGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAA...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCAGCCACAATGGCCCCTTaGCTTTTCCTTAAACACCCC +
Preference number: 3 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPATMAP*LFLKHP
Trigger: GGGGTGTTTAAGGAAAAGCAAAGGGGCCATTGTGGC...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCAAGCTCTCAGCATCTCTaGCCTGGAGTATTGCAGTCC +
Preference number: 3 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPSSQHL*PGVLQS
Trigger: GGACTGCAATACTCCAGGCAAGAGATGCTGAGAGCT...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp GCGAGAAAGTCGTTGCTAACGCATGGTGAGAGGATGTaGCGTCACAGCATGAGCAGTCCCTGGTTGTCCCAT +
Preference number: 3 (lower is better)
Translates to: ARKSLLTHGERM*RHSMSSPWLSH
Trigger: ATGGGACAACCAGGGACTGCTCATGCTGTGACGTCACATCCTCTCACCATGCGTTAGCAACGACTTTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp GATGTTTTTCTCCTCTGTCCACACTCCTCCCCTGGTTaGGACCATGGGTCCGTGGCTTTAGATGCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: DVFLLCPHSSPG*DHGSVALDAVH
Trigger: GTGGACAGCATCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGAAAAACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 72 bp GAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATaGATTGCTTCCTCTGATTTGCGTGGAGGTCACAGA +
Preference number: 3 (lower is better)
Translates to: ELGGRHGEAQRG*IASSDLRGGHR
Trigger: TCTGTGACCTCCACGCAAATCAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp TTCCTCTCTGCGAGGCAGAAGTCAGAAGGTAGAGATTaGTGGCAAAACTGTGAAGTCCCACCCTGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: FLSARQKSEGRD*WQNCEVPPWGL
Trigger: GAGACCCCAGGGTGGGACTTCACAGTTTTGCCAGCAATCTCTACCTTCTGACTTCTGCCTCGCAGAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 72 bp CTCTCTGCGAGGCAGAAGTCAGAAGGTAGAGATTGCTaGCAAAACTGTGAAGTCCCACCCTGGGGTCTCAAC +
Preference number: 3 (lower is better)
Translates to: LSARQKSEGRDC*QNCEVPPWGLN
Trigger: GTTGAGACCCCAGGGTGGGACTTCACAGTTTTGCCAGCAATCTCTACCTTCTGACTTCTGCCTCGCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 72 bp TCGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTaGTGTCAGTTGGCTTTGCTGGCCATAATGAACTCG +
Preference number: 3 (lower is better)
Translates to: SCHGVSHELCFL*CQLALLAIMNS
Trigger: CGAGTTCATTATGGCCAGCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp AATAGAATATCCTCTACAGCAGGGGTCTGCAACCTCTaGGCTGCGATGGTACTGGTCCATGGCCTGTTGGGA +
Preference number: 3 (lower is better)
Translates to: NRISSTAGVCNL*AAMVLVHGLLG
Trigger: TCCCAACAGGCCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGAGGATATTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp GGCTTATTCACCCAGCTGCCCACTCATCAGCTCCACTaGATGTCAGACAAGCATCTCAACCCTGACATGTCC +
Preference number: 3 (lower is better)
Translates to: GLFTQLPTHQLH*MSDKHLNPDMS
Trigger: GGACATGTCAGGGTTGAGATGCTTGTCTGACATCCAGTGGAGCTGATGAGTGGGCAGCTGGGTGAATAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTATGCGAGAAAGTCGTaGCTAACGCATGGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLYARKS*LTHGER
Trigger: CCTCTCACCATGCGTTAGCAACGACTTTCTCGCATA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCAGGGGAAGCAATGAGGTaGAAAACTTCGTGTCATGGG +
Preference number: 3 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPGEAMR*KTSCHG
Trigger: CCCATGACACGAAGTTTTCAACCTCATTGCTTCCCC...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp CCAGACCAAACTGACTCAGGTGACAGGAATCACAGCTaGCAGCTACAGATCAGCACAACAGCTGCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: PDQTDSGDRNHS*QLQISTTAALQ
Trigger: CTGGAGAGCAGCTGTTGTGCTGATCTGTAGCTGTCAGCTGTGATTCCTGTCACCTGAGTCAGTTTGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp GGAAGGGCAACTCTGTCAATGTGCCCAAGGGCCACCTaGAATGAAAGTCATGAGCAGCCTGGGATTAAGCAC +
Preference number: 3 (lower is better)
Translates to: GRATLSMCPRAT*NESHEQPGIKH
Trigger: GTGCTTAATCCCAGGCTGCTCATGACTTTCATTTCAGGTGGCCCTTGGGCACATTGACAGAGTTGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp CTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGATaGTGTCCACATCTGGGAACCTTCGTATTTCCATCT +
Preference number: 3 (lower is better)
Translates to: LPWLRPWVRGFR*CPHLGTFVFPS
Trigger: AGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CCTGCCACACAGCCTTTCCGGTACCCACACAGTCTTTaGCATGATCTTTTGAAGGAGATTTGCCCCCGTTTC +
Preference number: 3 (lower is better)
Translates to: PATQPFRYPHSL*HDLLKEICPRF
Trigger: GAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAGGCTGTGTGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp TCAGGGGGAAGCAATGAGGTTGAAAACTTCGTGTCATaGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCA +
Preference number: 3 (lower is better)
Translates to: SGGSNEVENFVS*GVPRALFPVVS
Trigger: TGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACGAAGTTTTCAACCTCATTGCTTCCCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CTACCTGCTTGGGCTGAGCTCTCAGCATCTCTTGCCTaGAGTATTGCAGTCCTACTAGTCTTCCTGATCCTG +
Preference number: 3 (lower is better)
Translates to: LPAWAELSASLA*SIAVLLVFLIL
Trigger: CAGGATCAGGAAGACTAGTAGGACTGCAATACTCCAGGCAAGAGATGCTGAGAGCTCAGCCCAAGCAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp AGCATCTCAACCCTGACATGTCCAGCACCGAGCTCCTaGACTTCTCTCCCAAACTGGCATTCTTCTCCATCT +
Preference number: 3 (lower is better)
Translates to: SISTLTCPAPSS*TSLPNWHSSPS
Trigger: AGATGGAGAAGAATGCCAGTTTGGGAGAGAAGTCCAGGAGCTCGGTGCTGGACATGTCAGGGTTGAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTGGTGTCAGTTGGCTTaGCTGGCCATAATGAACTCG +
Preference number: 3 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECWCQLA*LAIMNS
Trigger: CGAGTTCATTATGGCCAGCAAAGCCAACTGACACCA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGGCTGCACAACCCACTaGATCGAGGTTAATGCAAGC +
Preference number: 3 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGGCTTH*IEVNAS
Trigger: GCTTGCATTAACCTCGATCAAGTGGGTTGTGCAGCC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGCTTTGGCATGATCTTTaGAAGGAGATTTGCCCCCGT +
Preference number: 3 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVLWHDL*KEICPR
Trigger: ACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAG...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp CTGACCGTATTCCCTGACCTGGCTGCACAACCCACTTaGTCGAGGTTAATGCAAGCCATCTTTCTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: LTVFPDLAAQPT*SRLMQAIFLLK
Trigger: CTTCAGGAGAAAGATGGCTTGCATTAACCTCGATCAAGTGGGTTGTGCAGCCAGGTCAGGGAATACGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp GGCCAGAGAAAGAAGAGCTGGAAGACACAGAGAGTATaGAGAGAGTTGGGAGGAAGACATGGTGAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: GQRKKSWKTQRV*RELGGRHGEAQ
Trigger: CTGAGCCTCACCATGTCTTCCTCCCAACTCTCTTCATACTCTCTGTGTCTTCCAGCTCTTCTTTCTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp AGGAGTTGGACTGAGACAGCTCTGAGTGAATCTCCTTaGGATTACAGTGTCGCACACACACATAGGCTCCCG +
Preference number: 3 (lower is better)
Translates to: RSWTETALSESP*DYSVAHTHRLP
Trigger: CGGGAGCCTATGTGTGTGTGCGACACTGTAATCTCAAGGAGATTCACTCAGAGCTGTCTCAGTCCAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp CACACAGCCTTTCCGGTACCCACACAGTCTTTGGCATaGTCTTTTGAAGGAGATTTGCCCCCGTTTCAGTGG +
Preference number: 3 (lower is better)
Translates to: HTAFPVPTQSLA*SFEGDLPPFQW
Trigger: CCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAGGCTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 72 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTaGTACAGCTTGGAAGGCCTTCGCTTTCCAGACCAA +
Preference number: 3 (lower is better)
Translates to: TEAFSHQLELTI*YSLEGLRFPDQ
Trigger: TTGGTCTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp GTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGATTTaGGTGGAGGTCACAGACACACTGCTGAGTTTTAAG +
Preference number: 3 (lower is better)
Translates to: VRLSVDALLPLI*VEVTDTLLSFK
Trigger: CTTAAAACTCAGCAGTGTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAATGCATCCACGCTGAGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 72 bp TCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTaGAAGGCCTTCGCTTTCCAGACCAAACTGACTCAG +
Preference number: 3 (lower is better)
Translates to: SLISWSSLSATA*KAFAFQTKLTQ
Trigger: CTGAGTCAGTTTGGTCTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 72 bp CTCACTCTTCTTCCACTGAAGCCTTCTCTCATCAGCTaGAGCTCACTATCTGCTACAGCTTGGAAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: LTLLPLKPSLIS*SSLSATAWKAF
Trigger: GAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGTGGAAGAAGAGTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTATTGCTTCCTCTGATTaGCGTGGAGGTCACAGACAC +
Preference number: 3 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGIASSD*RGGHRH
Trigger: GTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAAT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTAGAACCTCCACTCCCTaGACTTCTTTCCCTACCTAC +
Preference number: 3 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGRTSTP*TSFPTY
Trigger: GTAGGTAGGGAAAGAAGTCAAGGGAGTGGAGGTTCT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAATCTTTTGAAGGAGATTaGCCCCCGTTTCAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKSFEGD*PPFQWV
Trigger: CACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGA...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCACAACCAGAAGCATTTTaGTGTAAGCCAGAAAAAGGG +
Preference number: 3 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPQPEAF*CKPEKG
Trigger: CCCTTTTTCTGGCTTACACAAAAATGCTTCTGGTTG...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp CTTTCCGGTACCCACACAGTCTTTGGCATGATCTTTTaGAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: LSGTHTVFGMIF*RRFAPVSVGAS
Trigger: ACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp AGTGACACCTATTATTCCACCTGGGCTTCCCTGGAGTaGTCCAGTTCCCTCATTACTTTCATGGCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SDTYYSTWASLE*SSSLITFMAGP
Trigger: TGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCCAGGGAAGCCCAGGTGGAATAATAGGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp AACAGCAGCTCAGGACTCAGTCATAACAGTCTCTCCTaGCCCCATGTGGGGCTGAAACATGTGCCTTTCTTT +
Preference number: 3 (lower is better)
Translates to: NSSSGLSHNSLS*PHVGLKHVPFF
Trigger: AAAGAAAGGCACATGTTTCAGCCCCACATGGGGTCAGGAGAGACTGTTATGACTGAGTCCTGAGCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CATCCTATCTGCTGTCTCATGCTCCCTCTCATCTTCTaGAGACAAAGAAGAGGGAGAGATACGTGTGCCATC +
Preference number: 3 (lower is better)
Translates to: HPICCLMLPLIF*RQRRGRDTCAI
Trigger: GATGGCACACGTATCTCTCCCTCTTCTTTGTCTCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTCCCTGGTTGTCCCATaGTCAGATAAACGTAGTGCA +
Preference number: 3 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGSLVVP*SDKRSA
Trigger: TGCACTACGTTTATCTGACAATGGGACAACCAGGGA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGACCAAAGCCATTCTATaGCAAGATACAGATCAAAGG +
Preference number: 3 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLTKAIL*QDTDQR
Trigger: CCTTTGATCTGTATCTTGCAATAGAATGGCTTTGGT...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTTCCACGAGATGATTTaGATAAGCCTTGAGAATTCA +
Preference number: 3 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLFHEMI*ISLENS
Trigger: TGAATTCTCAAGGCTTATCAAAATCATCTCGTGGAA...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATTTCCTGTGGTGTCAGTaGGCTTTGCTGGCCATAATG +
Preference number: 3 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHFLWCQ*ALLAIM
Trigger: CATTATGGCCAGCAAAGCCAACTGACACCACAGGAA...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp ACTCCCTTGACTTCTTTCCCTACCTACAGAACTCAGTaGATCTCAAGCCTTACTCCGATTCCAACCTGCCAC +
Preference number: 3 (lower is better)
Translates to: TPLTSFPTYRTQ*ISSLTPIPTCH
Trigger: GTGGCAGGTTGGAATCGGAGTAAGGCTTGAGATTCACTGAGTTCTGTAGGTAGGGAAAGAAGTCAAGGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp CTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTaGCTAAACTTGACTTCAGGGGGAAGCAATGAGGTT +
Preference number: 3 (lower is better)
Translates to: LITFMAGPAQHR*LNLTSGGSNEV
Trigger: AACCTCATTGCTTCCCCCTGAAGTCAAGTTTAGTCACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 72 bp TCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTaGACCGGTGTCTCTAATGCCTCTGATTCACTCTCA +
Preference number: 3 (lower is better)
Translates to: SAALQRNCAPDN*TGVSNASDSLS
Trigger: TGAGAGTGAATCAGAGGCATTAGAGACACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 72 bp GGATTTTTGTTATCGGAGGACGTCTCTCTCTCTGGTTaGAAGTTTGGTGCTTGGGTGCATAGTCTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: GFLLSEDVSLSG*KFGAWVHSLPE
Trigger: CTCTGGAAGACTATGCACCCAAGCACCAAACTTCCAACCAGAGAGAGAGACGTCCTCCGATAACAAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCACCTACACACTGCTATaGATGCAAAAATCCATTTGG +
Preference number: 3 (lower is better)
Translates to: TEAFSHQLELTICYSLEGTYTLL*MQKSIW
Trigger: CCAAATGGATTTTTGCATCAATAGCAGTGTGTAGGT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp CCACACAGTCTTTGGCATGATCTTTTGAAGGAGATTTaGCCCCGTTTCAGTGGGTGCAAGTCAACTCATCAT +
Preference number: 3 (lower is better)
Translates to: PHSLWHDLLKEI*PRFSGCKSTHH
Trigger: ATGATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTTTCAGTCTAATCATTaGGCATCTCCGAATGTGGTA +
Preference number: 3 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGFQSNH*ASPNVV
Trigger: TACCACATTCGGAGATGCCAAATGATTAGACTGAAA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATCTTTATACTGCCCCTaGAAGATCAGTCTCCCATCT +
Preference number: 3 (lower is better)
Translates to: NGFKGQQSKPIVSNSERASLYCP*KISLPS
Trigger: AGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGA...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR CCA 72 bp CACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTaGTTTTATCTACACCCACACTTCACTTCCCTTATC +
Preference number: 3 (lower is better)
Translates to: HPAEILIHMWSV*FYLHPHFTSLI
Trigger: GATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
3UTR CCA 72 bp TACACACTAACTCCATTCCCTTTTTCCCCTAGCCCTTaGCAACCACCCTCCCTTCTACTTTCAGTTTCTATA +
Preference number: 3 (lower is better)
Translates to: YTLTPFPFSPSP*QPPSLLLSVSI
Trigger: TATAGAAACTGAAAGTAGAAGGGAGGGTGGTTGCCAAGGGCTAGGGGAAAAAGGGAATGGAGTTAGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CAAGATTTAAGTTGTCTCTTCTGGATGTCCATTTGGTaGAAAACCCACCCAGTCATCTCATGCTGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: QDLSCLFWMSIW*KTHPVISCCFS
Trigger: GGAGAAGCAGCATGAGATGACTGGGTGGGTTTTCCACCAAATGGACATCCAGAAGAGACAACTTAAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp ACCTCCCAAACAGCTCAAGATTTAAGTTGTCTCTTCTaGATGTCCATTTGGTGGAAAACCCACCCAGTCATC +
Preference number: 3 (lower is better)
Translates to: TSQTAQDLSCLF*MSIWWKTHPVI
Trigger: GATGACTGGGTGGGTTTTCCACCAAATGGACATCCAGAAGAGACAACTTAAATCTTGAGCTGTTTGGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTTACAACTGTCAGTCTaGCAACATAGTTTTGCTTGT +
Preference number: 3 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGLQLSV*QHSFAC
Trigger: ACAAGCAAAACTATGTTGCAAGACTGACAGTTGTAA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAATTGAAAGCTGTACTTTaGAGTGACACCTATTATTCC +
Preference number: 3 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKLKAVL*SDTYYS
Trigger: GGAATAATAGGTGTCACTCAAAAGTACAGCTTTCAA...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTCCTCTAGAACAATGCTaGGCATGTAGTACGTACTCA +
Preference number: 3 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLPLEQC*ACSTYS
Trigger: TGAGTACGTACTACATGCCAAGCATTGTTCTAGAGG...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp TTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTaGGTAATATATCCAGCACACTCCATGACGAATGTT +
Preference number: 3 (lower is better)
Translates to: LLSSRVNSHTAY*VIYPAHSMTNV
Trigger: AACATTCGTCATGGAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
3UTR-3UTR CAA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTACTATCTGCTACAGCTaGGAAGGCCTTCGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRTICYS*EGLRFP
Trigger: TGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGT...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAAATGCCTCATAAACTCTaGGTGTCAGCTGTGGTGACT +
Preference number: 3 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKMPHKL*VSAVVT
Trigger: AGTCACCACAGCTGACACCAAGAGTTTATGAGGCAT...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
3UTR TCA 72 bp TGTGAAAAGGGTTCCCACCCCTGTGGTTGTATGGCTTaGAATAGTTTCATTGCTTTGAATATGTACGCACAC +
Preference number: 3 (lower is better)
Translates to: CEKGSHPCGCMA*NSFIALNMYAH
Trigger: GTGTGCGTACATATTCAAAGCAATGAAACTATTTCAAGCCATACAACCACAGGGGTGGGAACCCTTTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp CTCAATGCATGGTCTACAGAAATAAATGCAATAAGATaGCGCATCCTATCTGCTGTCTCATGCTCCCTCTCA +
Preference number: 3 (lower is better)
Translates to: LNAWSTEINAIR*RILSAVSCSLS
Trigger: TGAGAGGGAGCATGAGACAGCAGATAGGATGCGTCATCTTATTGCATTTATTTCTGTAGACCATGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp GGATCATATCATTCCTCTAGTTACTGTCTCAGAGTATaGGTCAAACTCTTACAAATAATGGGGCCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: GSYHSSSYCLRV*VKLLQIMGPGR
Trigger: CCTGCCTGGCCCCATTATTTGTAAGAGTTTGACTCATACTCTGAGACAGTAACTAGAGGAATGATATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp TCACTGCCTTTCCCACATCATAAGAGGGGAGTGACATaGAAAGTGCACAATCTTGTTACAGGAAACTGCATA +
Preference number: 3 (lower is better)
Translates to: SLPFPHHKRGVT*KVHNLVTGNCI
Trigger: TATGCAGTTTCCTGTAACAAGATTGTGCACTTTTCATGTCACTCCCCTCTTATGATGTGGGAAAGGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp AGATGTCACTGCCTTTCCCACATCATAAGAGGGGAGTaGCATGAAAAGTGCACAATCTTGTTACAGGAAACT +
Preference number: 3 (lower is better)
Translates to: RCHCLSHIIRGE*HEKCTILLQET
Trigger: AGTTTCCTGTAACAAGATTGTGCACTTTTCATGTCACTCCCCTCTTATGATGTGGGAAAGGCAGTGACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 72 bp GTCAGACAGCCTCAATGCATGGTCTACAGAAATAAATaGAATAAGATGACGCATCCTATCTGCTGTCTCATG +
Preference number: 3 (lower is better)
Translates to: VRQPQCMVYRNK*NKMTHPICCLM
Trigger: CATGAGACAGCAGATAGGATGCGTCATCTTATTGCATTTATTTCTGTAGACCATGCATTGAGGCTGTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR TCA 72 bp TGGGTCGTTGGTGATAAGGAAATAGTTTTTCGAGTGTaGAGAACCCCCATAGGGCAAATAGGTTTAACTACA +
Preference number: 3 (lower is better)
Translates to: WVVGDKEIVFRV*RTPIGQIGLTT
Trigger: TGTAGTTAAACCTATTTGCCCTATGGGGGTTCTTCACACTCGAAAAACTATTTCCTTATCACCAACGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp CAACTCATCATTCCACGAGATGATTTTGATAAGCCTTaGGAATTCACTCCAATGTCAAGCAGTCTGTCAGAC +
Preference number: 3 (lower is better)
Translates to: QLIIPRDDFDKP*EFTPMSSSLSD
Trigger: GTCTGACAGACTGCTTGACATTGGAGTGAATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR GCA 72 bp AGATGTAGTAATTGTCAACCCTTAATACGGCACATATaGAAGTGTGCTAACACAATTTGCACTGGCCATAGG +
Preference number: 3 (lower is better)
Translates to: RCSNCQPLIRHI*KCANTICTGHR
Trigger: CCTATGGCCAGTGCAAATTGTGTTAGCACACTTGCATATGTGCCGTATTAAGGGTTGACAATTACTACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp TACAGAAATAAATGCAATAAGATGACGCATCCTATCTaGTGTCTCATGCTCCCTCTCATCTTCTGGAGACAA +
Preference number: 3 (lower is better)
Translates to: YRNKCNKMTHPI*CLMLPLIFWRQ
Trigger: TTGTCTCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAGGATGCGTCATCTTATTGCATTTATTTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CCA 72 bp CCCTGTTTCAGTCTAATCATTTGGCATCTCCGAATGTaGTACAGATTTAGACTTGAACCACCAAAGAACATC +
Preference number: 3 (lower is better)
Translates to: PCFSLIIWHLRM*YRFRLEPPKNI
Trigger: GATGTTCTTTGGTGGTTCAAGTCTAAATCTGTACCACATTCGGAGATGCCAAATGATTAGACTGAAACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CCA 72 bp AAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTaGGTCGTTGGTGATAAGGAAATAGTTTTTCGAGTG +
Preference number: 3 (lower is better)
Translates to: KIVTFGLIGLSG*VVGDKEIVFRV
Trigger: CACTCGAAAAACTATTTCCTTATCACCAACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp ACTACAAGACTCAAGAACTCCTCACTGCTTTCTTTTTaGTCCCATCATTCCTTTGTGTCGGAAATTCAGTCT +
Preference number: 3 (lower is better)
Translates to: TTRLKNSSLLSF*SHHSFVSEIQS
Trigger: AGACTGAATTTCCGACACAAAGGAATGATGGGATCAAAAAGAAAGCAGTGAGGAGTTCTTGAGTCTTGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGCATCAAGGTTTGATTaGTACCTAGTAATCAGTGTG +
Preference number: 3 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRASRFD*YLVISV
Trigger: CACACTGATTACTAGGTACAAATCAAACCTTGATGC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR TCA 72 bp GTTGCTCAGATTAAAATAAGAGTCACTGTAGTGAGTTaGATCATGGCTCACAAAAAGGTATGTCCACATCCT +
Preference number: 3 (lower is better)
Translates to: VAQIKIRVTVVS*IMAHKKVCPHP
Trigger: AGGATGTGGACATACCTTTTTGTGAGCCATGATTCAACTCACTACAGTGACTCTTATTTTAATCTGAGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR-3UTR CAA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGAAAACCCCACTCAAGTaGAATATCATCATAAAGGAG +
Preference number: 3 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQKTPLK*NIIIKE
Trigger: CTCCTTTATGATGATATTCAACTTGAGTGGGGTTTT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR-3UTR CAA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGAGATATGTTGATACATaGGCATGTGTGTTCGTATTG +
Preference number: 3 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQRYVDT*ACVFVL
Trigger: CAATACGAACACACATGCCAATGTATCAACATATCT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR GCA 72 bp TTTCAACTTTTACTTGAATGCCCAGTTCTGAAAATTTaGTACTGTGAGTTGATCACTCCTTTCTCCTTAAAG +
Preference number: 3 (lower is better)
Translates to: FQLLLECPVLKI*YCELITPFSLK
Trigger: CTTTAAGGAGAAAGGAGTGATCAACTCACAGTAGCAAATTTTCAGAACTGGGCATTCAAGTAAAAGTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTCTGTGGAGGAGTAGGTaGCTGTGCAGAACCCGTGCG +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCLWRSR*LCRTRA
Trigger: CGCACGGGTTCTGCACAGTCACCTACTCCTCCACAG...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGACACACCCACCACCCTaGTGCCTCTCTCCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAETHPPP*CLSPPA
Trigger: TGCCGGGGGAGAGAGGCAGCAGGGTGGTGGGTGTGT...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCAGGGTCCTCTGAATCCTaGTGTGCCCCAGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAGSSES*CAPGLS
Trigger: ACTGAGCCCTGGGGCACACCAGGATTCAGAGGACCC...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGTGCAGTGGAGAGATaGAGACCCAGCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEGAVER*RPSCRG
Trigger: CCCACGGCAGCTGGGTCTTCATCTCTCCACTGCACC...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCTCGGGGCTGCGCGGCTaGCTCCCGTCCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGSGLRG*LPSLWV
Trigger: CACCCAGAGGGACGGGAGGCAGCCGCGCAGCCCCGA...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTGCCTTTCACTTTTGCTaGGTGGCCTGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCAFHFC*VAWKAF
Trigger: GAAGGCCTTCCAGGCCACCCAGCAAAAGTGAAAGGC...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCACTCGGGCCCGCTGCTTaGGCGTGCAGAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPLGPAA*ACRGDL
Trigger: AAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAG...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GAACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTGGTGCTCCCGGCGGCTaGGCGAGCTCTGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ELVLITQLKSLSTCGQSGGAPGG*ASSGAR
Trigger: GCGAGCCCCAGAGCTCGCTCAGCCGCCGGGAGCACC...ACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGCACACTCTGCTGTTTTaGCTCCTCTCTCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEHTLLF*LLSPRL
Trigger: CAGCCGGGGAGAGAGGAGGCAAAACAGCAGAGTGTG...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGGCTATCCATGGCGGCTaGGGACACTGCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLAIHGG*GHCPAR
Trigger: CCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATAGC...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGCGTCGTCGCTATCCATaGCGGCTGGGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTERRRYP*RLGTLP
Trigger: GGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACG...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTTCTACATACGTGCCCTaGAGAACTCCCCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCSTYVP*RTPPSS
Trigger: CGAAGATGGGGGAGTTCTCCAGGGCACGTATGTAGA...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GAGGGCATGCCTCATAAACTCTTGGTGTCAGCTGTGGTGACTCTCAGGTTTCACCGCTCAACGCGGTCCTaGGCGCTGCGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: EGMPHKLLVSAVVTLRFHRSTRS*ALRASR
Trigger: GCGAGAAGCCCGCAGCGCCCAGGACCGCGTTGAGCG...GTGAAACCTGAGAGTCACCACAGCTGACACCAAGAGTTTATGAGGCATGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATTTTCCCCTAGCCCTTaGCAACCACCCTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAFSPSP*QPPSLL
Trigger: TAGAAGGGAGGGTGGTTGCCAAGGGCTAGGGGAAAA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCAGTGAGCCACCGCGCCTaGCCCATACTAACCATTTTT +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAVSHRA*PILTIF
Trigger: AAAAATGGTTAGTATGGGCCAGGCGCGGTGGCTCAC...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGCTGCGATGGTACTaGTCCATGGCCTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEGLRWY*SMACWE
Trigger: TTCCCAACAGGCCATGGACCAGTACCATCGCAGCCC...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp AACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTaGCAGGCTTCTAGGTTAGAGCAAACCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NSGPLLGRAEGT*QASRLEQTFSL
Trigger: CAGGGAAAAGGTTTGCTCTAACCTAGAAGCCTGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp GGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTaGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GVSHELCFLWCQ*ALLAIMNSGPL
Trigger: CAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTGCTCAGGCACATCAATaGCCGTTTCTTCATCAAGGG +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCAQAHQ*PFLHQG
Trigger: CCCTTGATGAAGAAACGGTCATTGATGTGCCTGAGC...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGCTGCATCGGGGGCATaGCCAGCACTATCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSAASGA*PALSSP
Trigger: GGGAGAGGATAGTGCTGGTCATGCCCCCGATGCAGC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCAGGTGCTCCCGGCGGCTaGGCGAGCTCTGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: NGFKGQQSKPIVSNSERAGAPGG*ASSGAR
Trigger: GCGAGCCCCAGAGCTCGCTCAGCCGCCGGGAGCACC...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR TCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGAGTCCCGGCAACTCCCTaGTGTTGGACCTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRVPATP*CWTSRP
Trigger: TGGTCTGGAGGTCCAACATCAGGGAGTTGCCGGGAC...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGAAGCAGTTGCATCGTaGGGCCTGCATAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEEAVAS*GLHNSA
Trigger: GGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTC...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGATGAGCATTGCCACCTaGGCTCCACCTCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEMSIAT*APPPVR
Trigger: TCTGACAGGAGGTGGAGCTCAGGTGGCAATGCTCAT...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATTCTCCCTCACTCAGTaGCAAAGCCCTCTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAFSLTQ*QSPLFG
Trigger: TCCAAACAGAGGGCTTTGTCACTGAGTGAGGGAGAA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTCCCGTCCCTCTGGGTaGTCCCGGCGGCTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGSRPSG*SRRLSE
Trigger: CTCGCTCAGCCGCCGGGAGCACCCAGAGGGACGGGA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTCTGGAGCTCACTATCTaGTACAGCTTGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCLELTI*YSLEGL
Trigger: AAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAG...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCACCCCGTTTCAGTGGGTaGAAGTCAACTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAPRFSG*KSTHHS
Trigger: GGAATGATGAGTTGACTTGCACCCACTGAAACGGGG...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCACAATCTCTGCCTCTGTaGTCACATCACTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAQSLPL*SHHCLL
Trigger: AAGGAGGCAGTGATGTGACCACAGAGGCAGAGATTG...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCACCCTCATTACTTTCATaGCTGGTCCAGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAPSLLS*LVQHST
Trigger: TGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGG...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCCCTGACCGTATTCCCTaGCCTGGCTGCACAACCCAC +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSPDRIP*PGCTTH
Trigger: GTGGGTTGTGCAGCCAGGTCAGGGAATACGGTCAGG...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCACCTCCTCCGTGTGTCTaGAACCAGTCCCGGCAACTC +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPPPPCV*NQSRQL
Trigger: GAGTTGCCGGGACTGGTTTCAGACACACGGAGGAGG...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GAGGGCATGCCTCATAAACTCTTGGTGTCAGCTGTGGTGACTCTCAGGTTTCACTTGGCCTTCAGCTGCTaGGGCAGCAGCCGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: EGMPHKLLVSAVVTLRFHLAFSC*GSSRRP
Trigger: GGGACGACGGCTGCTGCCGCAGCAGCTGAAGGCCAA...GTGAAACCTGAGAGTCACCACAGCTGACACCAAGAGTTTATGAGGCATGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACCCGCTGCTTGGGCGTaGAGAGGGGACCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKPAAWA*RGDLAG
Trigger: GCCTGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGATTGCCCAGGCTGGAGTaGAGTGACGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRLPRLE*SDVISA
Trigger: AGCCGAGATCACGTCACTGCACTCCAGCCTGGGCAA...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTAGCATGAGCAGTCCCTaGTTGTCCCATTGTCAGATA +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCSMSSP*LSHCQI
Trigger: TATCTGACAATGGGACAACCAGGGACTGCTCATGCT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GAGGGCATGCCTCATAAACTCTTGGTGTCAGCTGTGGTGACTCTCAGGTTTCACCTTCTCGCGGACACTTaGACCGCCCGTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EGMPHKLLVSAVVTLRFHLLADT*TARRGS
Trigger: GGAGCCCCTACGGGCGGTCCAAGTGTCCGCGAGAAG...GTGAAACCTGAGAGTCACCACAGCTGACACCAAGAGTTTATGAGGCATGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGTCCTGCCCCTGTCCGTaGAAACATGGTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAESCPCP*KHGLPQ
Trigger: TTGTGGAAGACCATGTTTCCACGGACAGGGGCAGGA...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCAATGGTGGAATCATCCTaGATTATCTGGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAMVESS*IIWVGP
Trigger: AGGACCCACCCAGATAATCCAGGATGATTCCACCAT...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATGGATGTCCATTTGGTaGAAAACCCACCCAGTCATC +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAWMSIW*KTHPVI
Trigger: GATGACTGGGTGGGTTTTCCACCAAATGGACATCCA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAGCCATAGGCAACGGTaGGCTCTTCATCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSSHRQR*ALHRPP
Trigger: TGGAGGCCGATGAAGAGCTCACCGTTGCCTATGGCT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACCGCCAAGTTTGTGGTaGTGTGTTACAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRPPSLW*CVTAAP
Trigger: TGGGGCTGCTGTAACACATCACCACAAACTTGGCGG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCCCTAACGCCAGGCCCTaGGAATGTGACCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLPNARP*ECDLIW
Trigger: CCAAATCAGGTCACATTCTCAGGGCCTGGCGTTAGG...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCACGCGGTCCTGGGCGCTaGGGGCTTCTCGCGGACACT +
Preference number: 4 (lower is better)
Translates to: NGFKGQQSKPIVSNSERARGPGR*GLLADT
Trigger: AGTGTCCGCGAGAAGCCCGCAGCGCCCAGGACCGCG...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCACATCATGTCAATCTCTaGCTCTGTGGTCACATCACT +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAHHVNL*LCGHIT
Trigger: AGTGATGTGACCACAGAGGCAGAGATTGACATGATG...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCAGCCTCCTGTGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLSLLCS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACACAGGAGGCT...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATCAGCATCTCTTGCCTaGAGTATTGCAGTCCTACTA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLASASLA*SIAVLL
Trigger: TAGTAGGACTGCAATACTCCAGGCAAGAGATGCTGA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCATCCACACTCCTCCCCTaGTTGAGACCATGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPSTLLP*LRPWVR
Trigger: ACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGA...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGCCAAGTCTGGCTTCTaGTTCTGCTGCCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSAKSGF*FCCPAK
Trigger: CTTTGCAGGGCAGCAGAATCAGAAGCCAGACTTGGC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTAGTAAGGGTGGCGGTTaGTGGCGGCCGGGAAACCGA +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGSKGGG*WRPGNR
Trigger: TCGGTTTCCCGGCCGCCATCAACCGCCACCCTTACT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACCAGCACAGCACAGGTaGCTAAACTTGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRPAQHR*LNLTSG
Trigger: CCCTGAAGTCAAGTTTAGTCACCTGTGCTGTGCTGG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCGCTACCTGCTTGGGCTaGGCTCTCAGCATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECATCLG*ALSISC
Trigger: GCAAGAGATGCTGAGAGCTCAGCCCAAGCAGGTAGC...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGCAGGCCCTGAGAATGTaGCCTGATTTGGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEQALRM*PDLEKG
Trigger: TCCTTTTTCCAAATCAGGTCACATTCTCAGGGCCTG...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTTCGGGGCTGCGCGGCTaGCTCCCGTCCCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QQSKPIVSNSERACLINSSGLRG*LPSLWV
Trigger: CACCCAGAGGGACGGGAGGCAGCCGCGCAGCCCCGA...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCACTGTGCAGAACCCGTaGGGTAATCCGTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSTVQNP*GNPSSS
Trigger: GGACGATGACGGATTACCGCACGGGTTCTGCACAGT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGCTGTGGTCACATCACTaGCTCCTTTTCTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAELWSHH*LLFSVC
Trigger: ACACACAGAGAAAAGGAGGCAGTGATGTGACCACAG...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCTTGCATCGTGAGGCCTaGATAACTCTGCCTCTTGCG +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCLHREA*ITLPLA
Trigger: CGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAA...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGTCTACAGCAGGGGTCTaGAACCTCTGGGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVSTAGV*NLWAAM
Trigger: CATCGCAGCCCAGAGGTTGCAGACCCCTGCTGTAGA...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTGCCTCCCGTCCCTCTaGGTGCTCCCGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKACLPSL*VLPAAE
Trigger: CTCAGCCGCCGGGAGCACCCAGAGGGACGGGAGGCA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTATTCAAATGTCCATTTaGGGACATGCTCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCIQMSI*GHAPTG
Trigger: ACCTGTAGGAGCATGTCCCCAAATGGACATTTGAAT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCAAGCGGCTGAGGCACTaGGGAAGCCTACGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGKRLRH*GSLRAL
Trigger: GAGAGCTCGTAGGCTTCCCCAGTGCCTCAGCCGCTT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCACAAGCCAGTGGAATTTaGGGAGTTTTTCACTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAQASGI*GVFHLS
Trigger: TGACAAGTGAAAAACTCCCCAAATTCCACTGGCTTG...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTATCCAGCACACTCCATaGCGAATGTTATCTTTATAC +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCIQHTP*RMLSLY
Trigger: GTATAAAGATAACATTCGTCATGGAGTGTGCTGGAT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGGGTGCGGATGCATTTaGTGGGCCCAAAACGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGGCGCI*WAQNGG
Trigger: ACCCCCGTTTTGGGCCCATCAAATGCATCCGCACCC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTGCCCAAGGGCCACCTaGAATGAAAGTCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTECPRAT*NESHEQ
Trigger: CTGCTCATGACTTTCATTTCAGGTGGCCCTTGGGCA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTCTGATGCGATGAAATaGCCAGATGCAGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLSDAMK*PDAAAS
Trigger: GGAAGCCGCTGCATCTGGTCATTTCATCGCATCAGA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCGAGTGTTCACTGCATTaGGCTTTATCTGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCECSLH*ALSGSA
Trigger: CGCTGACCCAGATAAAGCTCAATGCAGTGAACACTC...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTCTGTCTTATGTCAAATaGTCGACAATACCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCLSYVK*STIPLS
Trigger: ACTGAGAGGTATTGTCGAGCATTTGACATAAGACAG...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAAGCATGCAACCGGGTaGTCTAGGAAGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSKHATG*SRKPGV
Trigger: AACACCAGGCTTCCTAGAGCACCCGGTTGCATGCTT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATCGGAGGCTCCGGTGTaGCGCCTTGGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKSEAPV*RLGRCR
Trigger: GCGGCAGCGGCCAAGGCGGCACACCGGAGCCTCCGA...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp AAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAGGGGCTGGCTCGCACTaGCTCCCCCTACAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: KGQQSKPIVSNSERACLIGAGSH*LPLQPF
Trigger: AAAGGGCTGTAGGGGGAGGCAGTGCGAGCCAGCCCC...TATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGCTGAAGATTCACCATaGACGCAGTTGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEAEDSP*TQLHFP
Trigger: TGGAAAATGCAACTGCGTGCATGGTGAATCTTCAGC...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACTTTTGAAGGAGATTTaGCCCCGTTTCAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRLLKEI*PRFSGC
Trigger: GCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCATTCAAGCGATTCTCGTaGCTCAGCCTCCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPFKRFS*LSLLCS
Trigger: GCTACACAGGAGGCTGAGGCACGAGAATCGCTTGAA...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAGGATGAGGACTGCTaGTCTAGAGCCCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECKDEDC*SRAPGS
Trigger: GCTTCCAGGGGCTCTAGAGCAGCAGTCCTCATCCTT...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCTGCCTCCCGTCCCTCTaGGTGCTCCCGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISCLPSL*VLPAAE
Trigger: CTCAGCCGCCGGGAGCACCCAGAGGGACGGGAGGCA...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp ACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTTTCGTCGTCGCTATCCATaGCGGCTGGGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: TRTHHPAEILIHMWSVWFRRRYP*RLGTLP
Trigger: GGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACG...AAACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCTTTTGCTGGGTGGCCTaGAAGGCCTTCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGFCWVA*KAFSST
Trigger: GGTGGAGCTGAAGGCCTTCCAGGCCACCCAGCAAAA...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCAGAAAACTTCGTGTCATaGGGTGTCCCACGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPENFVS*GVPRAL
Trigger: CAGAGCTCGTGGGACACCCCATGACACGAAGTTTTC...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp TGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATaGCTTCCTCTGATTTGCGTGGAGGTCACAGACACA +
Preference number: 4 (lower is better)
Translates to: WEEDMVRLSVDA*LPLICVEVTDT
Trigger: TGTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGCACTATCCTCTCCCTaGCCGTATTCCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGALSSP*PYSLTW
Trigger: CCAGGTCAGGGAATACGGTCAGGGAGAGGATAGTGC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGATGCAGCGGCTTCCTaGCACATTTCCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGDAAAS*HISFPS
Trigger: GCTGGGGAAGGAAATGTGTCAGGAAGCCGCTGCATC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGTGATTCTGATGCGATaGAATGACCAGATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSVILMR*NDQMQR
Trigger: CCGCTGCATCTGGTCATTTCATCGCATCAGAATCAC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTCCACCAGGAAGCGGCTaGGGCACTGGGGAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAPPGSG*GTGEAY
Trigger: GTAGGCTTCCCCAGTGCCTCAGCCGCTTCCTGGTGG...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATACGCTCCCTCCCTCGCTaGTTGACAGTTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KGQQSKPIVSNSERACLIRSLPR*LTVPCP
Trigger: GGGACAGGGAACTGTCAATCAGCGAGGGAGGGAGCG...TATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR TCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCCTGGTCTTGAACTCCTaGTCTCAGGTGACCCACTTG +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECLVLNS*SQVTHL
Trigger: CAAGTGGGTCACCTGAGATCAGGAGTTCAAGACCAG...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCATTAGGAAAATGGTGTaGCTCCAGGCAACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCIRKMV*LQATAA
Trigger: AGCTGCTGTTGCCTGGAGTCACACCATTTTCCTAAT...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCAACAGTTTCCCTGATTaGTTTTCCTCACACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCNSFPD*FSSHSP
Trigger: GGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGTT...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCCTCCGTCTACATACGTaGCCTGGAGAACTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGLRLHT*PGELPH
Trigger: ATGGGGGAGTTCTCCAGGGCACGTATGTAGACGGAG...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTTCATCGGCCTCCACTaGTCTCAGGGTGCGGATGCA +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGFIGLH*SQGADA
Trigger: TGCATCCGCACCCTGAGAGCAGTGGAGGCCGATGAA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCCACTGCCACCTAGCTaGAAAGCATGCAACCGGGTG +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGPLPPS*KACNRV
Trigger: CACCCGGTTGCATGCTTTGCAGCTAGGTGGCAGTGG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTGCTGTTACCCAGGATaGCCAGGCGTTCTCACATAT +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLCCYPG*PGVLTY
Trigger: ATATGTGAGAACGCCTGGGCATCCTGGGTAACAGCA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTGTGCTCCAGATAACTaGACCGGTGTCTCTAATGCC +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTECAPDN*TGVSNA
Trigger: GGCATTAGAGACACCGGTGCAGTTATCTGGAGCACA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACATAACTCTGCCTCTTaGGGCTGCATCATGTCAATC +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRHNSAS*GCIMSI
Trigger: GATTGACATGATGCAGCCGCAAGAGGCAGAGTTATG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACTGCAACCTCTGGGCTaGGATGGTACTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKLQPLG*DGTGPW
Trigger: CCATGGACCAGTACCATCGCAGCCCAGAGGTTGCAG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCGTCATATTCCTGGGCTaGACCGTTCAGCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGVIFLG*TVQLSV
Trigger: GACGGAGAGCTGAACGGTCCAGCCCAGGAATATGAC...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGCCTTCAGCTCCACCTaGTACCACTCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGAFSST*YHSGAS
Trigger: TGAAGCCCCTGAGTGGTACCAGGTGGAGCTGAAGGC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGTCTCTCTCTCTGGTTaGAAGTTTGGTGCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSVSLSG*KFGAWV
Trigger: CACCCAAGCACCAAACTTCCAACCAGAGAGAGAGAC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTTCTGGATGTCCATTTaGTGGAAAACCCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLFWMSI*WKTHPV
Trigger: GACTGGGTGGGTTTTCCACCAAATGGACATCCAGAA...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATTAAGTTGTCTCTTCTaGATGTCCATTTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLALSCLF*MSIWWK
Trigger: TTTCCACCAAATGGACATCCAGAAGAGACAACTTAA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCACTGTGGAGGAGTAGGTaGCTGTGCAGAACCCGTGCG +
Preference number: 4 (lower is better)
Translates to: NGFKGQQSKPIVSNSERALWRSR*LCRTRA
Trigger: CGCACGGGTTCTGCACAGTCACCTACTCCTCCACAG...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR TCA 90 bp ATCTTTATACTGCCCCTTGAAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCCTGTGGAGGAGTAGGTaGCTGTGCAGAACCCGTGCG +
Preference number: 4 (lower is better)
Translates to: IFILPLEDQSPICVIFLGLWRSR*LCRTRA
Trigger: CGCACGGGTTCTGCACAGTCACCTACTCCTCCACAG...GCCCAGGAATATGACACAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR TCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTCCCACAGCTACCTTTaGAAAAAGTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLSHSYL*KKSFSS
Trigger: GCTGGAGAAGGACTTTTTTCAAAGGTAGCTGTGGGA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGAATAGGGCTGAGGGGTaGAATGACTTTAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLNRAEG*NDFRSG
Trigger: CCCACTTCTAAAGTCATTTCACCCCTCAGCCCTATT...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTCACTCTTCTTCCACTaGAGCCTTCTCTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTESLFFH*SLLSSA
Trigger: AGCTGATGAGAGAAGGCTTCAGTGGAAGAAGAGTGA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCACCTACAGAACTCAGTaGATCTCAAGCCTTACTCCG +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSTYRTQ*ISSLTP
Trigger: CGGAGTAAGGCTTGAGATTCACTGAGTTCTGTAGGT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAATGGAGTGCAGTGACGTaGTCTCGGCTCACTGTAACC +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKWSAVT*SRLTVT
Trigger: GGTTACAGTGAGCCGAGATCACGTCACTGCACTCCA...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGAGGCAGAAGTTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKRQKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAACTTCTGCCT...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACCAGGGCTCAGTCCCTaGTGTTTTTCTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKPGLSP*CFSPLS
Trigger: GGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCATTCAGAGCATAGCTaGATCGGGGGCATGACCAGC +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGHSEHS*IGGMTS
Trigger: GCTGGTCATGCCCCCGATGCAGCTATGCTCTGAATG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAGCAAACCTTTTCCCTaGCACACAGCCTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECSKPFP*HTAFPV
Trigger: TACCGGAAAGGCTGTGTGGCAGGGAAAAGGTTTGCT...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACAGCCTCTAGAACAATaGTTGGCATGTAGTACGTAC +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRQPLEQ*LACSTY
Trigger: GTACGTACTACATGCCAAGCATTGTTCTAGAGGCTG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGGCTCTCAGCATCTCTTaGCTGGAGTATTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVALSIS*LEYCSP
Trigger: AGGACTGCAATACTCCAGGCAAGAGATGCTGAGAGC...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTCGTCGTCGCTATCCATaGCGGCTGGGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: QQSKPIVSNSERACLINSRRRYP*RLGTLP
Trigger: GGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACG...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGAGGAGGCACAGTACTTaGATACGTGGTTATAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLRRHST*IRGYRA
Trigger: AGCCCTATAACCACGTATCCAAGTACTGTGCCTCCT...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGGAGTATGAAGAGAGTTaGGAGGAAGACATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLEYEES*EEDMVR
Trigger: CCTCACCATGTCTTCCTCCCAACTCTCTTCATACTC...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAACAGGAGAGGGCAGCTaGGGCTGCTGTTACCCAGGA +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSTGEGS*GCCYPG
Trigger: TCCTGGGTAACAGCAGCCCCAGCTGCCCTCTCCTGT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTTATTCCCCACCACATaGAATCTTCCACGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLLFPTT*NLPRLL
Trigger: CAGCAGACGTGGAAGATTCCATGTGGTGGGGAATAA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTCGGCTGAGCGAGCTCTaGGGCTCGCGAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QQSKPIVSNSERACLINSRLSEL*GSRVWR
Trigger: CCTCCAAACTCGCGAGCCCCAGAGCTCGCTCAGCCG...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATAAGACCCAGCTGCCGTaGGACTTGGGAGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHKTQLP*DLGGLS
Trigger: AGAAAGCCCTCCCAAGTCCCACGGCAGCTGGGTCTT...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTTGCCCCCGTTTCAGTaGGTGCAAGTCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECLPPFQ*VQVNSS
Trigger: TGATGAGTTGACTTGCACCCACTGAAACGGGGGCAA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCAAAGTTAAGGATTTCATaGTGGAATCATCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: AGHNELGPAAWACRGDLAKLRIS*WNHPGL
Trigger: TAATCCAGGATGATTCCACCATGAAATCCTTAACTT...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTCCTTCTCAGTCTCTTaGCTGGGTCCTCTGAATCCT +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECSFSVS*LGPLNP
Trigger: AGGATTCAGAGGACCCAGCCAAGAGACTGAGAAGGA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGGCATCAGTTCAAAGTaGGGCCTCCCTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGGISSK*GLPSSV
Trigger: CACTGAAGAAGGGAGGCCTCACTTTGAACTGATGCC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGAGATGCAGTTTGGAGTaGAGGAGTGATTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTERCSLE*RSDLPC
Trigger: ACAAGGCAAATCACTCCTTCACTCCAAACTGCATCT...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGACTTCCTCTCATGGGTaGACCATTGGCTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTETSSHG*TIGLSF
Trigger: AAAGCTTAAGCCAATGGTTCACCCATGAGAGGAAGT...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTGGACCGTTCAGCTCTCCGTACTTTCCAGCAGAGTaGACAGTCACACGGCTTACT +
Preference number: 4 (lower is better)
Translates to: KISLPSVSYSWAGPFSSPYFPAE*TVTRLT
Trigger: AGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTA...CGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR TCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCATTTGGCATGATCTTTTaGAGGAGATTTGCCCCCGTT +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPFGMIF*RRFAPV
Trigger: AACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAA...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAATGGGCTTCCCTGGAGTaGTCCAGTTCCCTCATTACT +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKWASLE*SSSLIT
Trigger: AGTAATGAGGGAACTGGATCACTCCAGGGAAGCCCA...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATACTCCTGACATCAAGTaGTCTGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHTPDIK*SAHLGL
Trigger: GAGGCCAAGGTGGGCAGATCACTTGATGTCAGGAGT...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCTTTTATCTTTTTCCCGTCCCTCTGGGTaGTCCCGGCGGCTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LTIAIISRQSSFHSLLSFSRPSG*SRRLSE
Trigger: CTCGCTCAGCCGCCGGGAGCACCCAGAGGGACGGGA...AAAAGATAAAAGCGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGAATTCAATGCACTGTaGCACAAGCCTGACCGCGCT +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGEFNAL*HKPDRA
Trigger: AGCGCGGTCAGGCTTGTGGCACAGTGCATTGAATTC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCAGTCCTTCCAGCCGCTaGATCGAGGTGTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGSPSSR*IEVSKR
Trigger: TCTTTTAGACACCTCGATGCAGCGGCTGGAAGGACT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp AAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATACCCGACCTCCCGTTGTaGCGGGAGCAACTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: KGQQSKPIVSNSERACLIPDLPL*REQLES
Trigger: ACTTTCAAGTTGCTCCCGGCACAACGGGAGGTCGGG...TATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCACCAAGAGTGTTCACTaGATTGAGCTTTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLTKSVH*IELYLG
Trigger: ACCCAGATAAAGCTCAATGCAGTGAACACTCTTGGT...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGAGGGAGAGATACGTGTaGCATCAGAAGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVRERYV*HQKLHF
Trigger: AAAGTGCAGCTTCTGATGGCACACGTATCTCTCCCT...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCCTATCTGCTGTCTCATaGTCCCTCTCATCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECLSAVS*SLSSSG
Trigger: TCCAGAAGATGAGAGGGAGCATGAGACAGCAGATAG...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTTCAAGAGGGCCAATTaGACTTCTAGTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECFKRAN*TSSACS
Trigger: ACTGCAGGCACTAGAAGTGCAATTGGCCCTCTTGAA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGATCAGGCATAAGCCACTaGTCCCAGCCTTTATTTTTA +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRSGISH*SQPLFL
Trigger: TAAAAATAAAGGCTGGGAGCAGTGGCTTATGCCTGA...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAGTAGAGACTGGGTTTTaGCATGTTGGCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKVETGF*HVGHGW
Trigger: CCAGCCATGGCCAACATGGCAAAACCCAGTCTCTAC...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGCCAGTTCTGAAAATTTaGTACTGTGAGTTGATCACT +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEPVLKI*YCELIT
Trigger: AGTGATCAACTCACAGTAGCAAATTTTCAGAACTGG...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAACGTCGTCGCTATCCATaGCGGCTGGGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKRRRYP*RLGTLP
Trigger: GGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACG...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CCA 90 bp AGAGTGAACAGTCACACGGCTTACTGGGTAATATATCCAGCACACTCCATGACGGTCATATTCCTGGGCTaGACCGTTCAGCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RVNSHTAYWVIYPAHSMTVIFLG*TVQLSV
Trigger: GACGGAGAGCTGAACGGTCCAGCCCAGGAATATGAC...CGTCATGGAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACTGTTCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CCA 90 bp GAACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTGTCATATTCCTGGGCTaGACCGTTCAGCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: ELVLITQLKSLSTCGQSGVIFLG*TVQLSV
Trigger: GACGGAGAGCTGAACGGTCCAGCCCAGGAATATGAC...ACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp GAGGGCATGCCTCATAAACTCTTGGTGTCAGCTGTGGTGACTCTCAGGTTTCACTCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EGMPHKLLVSAVVTLRFHSVSYS*AGPFSS
Trigger: AGAGCTGAACGGTCCAGCCCAGGAATATGACACAGA...GTGAAACCTGAGAGTCACCACAGCTGACACCAAGAGTTTATGAGGCATGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAAAGAGACAAAGCTATaGCATGTGGTGAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSKETKL*HVVRVL
Trigger: AAGCACCCTCACCACATGCCATAGCTTTGTCTCTTT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCTTATTTCTCTTTCTGTaGAGCCTTACCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCLFLFL*SLTSSL
Trigger: GAGACTGGAGGTAAGGCTCCACAGAAAGAGAAATAA...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGAGCTTCCCAAGTAGCTaGGATTATAGGCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVSFPSS*DYRQLP
Trigger: TGGCAGTTGCCTATAATCCCAGCTACTTGGGAAGCT...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGTGTAGACATAGAACATaGAACCAAGGAAAAGCTATG +
Preference number: 4 (lower is better)
Translates to: QLALLAIMNSGPLLGRAECRHRT*NQGKAM
Trigger: CATAGCTTTTCCTTGGTTCCATGTTCTATGTCTACA...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCTTTCAGGCAAGCCAGTaGAATTTGGGGAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCFQASQ*NLGSFS
Trigger: TGAAAAACTCCCCAAATTCCACTGGCTTGCCTGAAA...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp CCTTTCCGGTACCCACACAGTCTTTGGCATGATCTTTaGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PFRYPHSLWHDL*KEICPRFSGCK
Trigger: CTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTACCGGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GAAGCCTATGTTCTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCTGTGGAGGAGTAGGTaGCTGTGCAGAACCCGTGCG +
Preference number: 4 (lower is better)
Translates to: EAYVLTIAIISRQSSFHSLWRSR*LCRTRA
Trigger: CGCACGGGTTCTGCACAGTCACCTACTCCTCCACAG...CGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAGAACATAGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGTGTCTCCAGGAGAAGTaGTTGTTCTGGCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKCLQEK*LFWQLK
Trigger: CTTCAGCTGCCAGAACAATCACTTCTCCTGGAGACA...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATAAGGTGAGATCCCTGTaGCTAGGGAACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHKVRSL*LGNWGD
Trigger: ATCTCCCCAGTTCCCTAGTCACAGGGATCTCACCTT...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATCATAACAGTCTCTCCTaGCCCCATGTGGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHHNSLS*PHVGLK
Trigger: TTTCAGCCCCACATGGGGTCAGGAGAGACTGTTATG...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAATCCCGTCCCTCTGGGTaGTCCCGGCGGCTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKSRPSG*SRRLSE
Trigger: CTCGCTCAGCCGCCGGGAGCACCCAGAGGGACGGGA...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAAATTTCCCATAAAGTaGGGTCCTCTCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSKFPIK*GPLIRV
Trigger: TACCCTGATGAGAGGACCGCACTTTATGGGAAATTT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCGTCCATTTGGGGACATaGTCCTACAGGTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGVHLGT*SYRLVP
Trigger: AGGAACTAACCTGTAGGAGCATGTCCCCAAATGGAC...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCTTTTTCCTACTCTCTTaGATCATGCACCCAGACACA +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSFFLLS*IMHPDT
Trigger: TGTGTCTGGGTGCATGATGCAAGAGAGTAGGAAAAA...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATACTCCCTTCGCCCACTTaGCCCTCGCCTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYILPSPT*PSPRRL
Trigger: GAGCCTCCGAGGCGAGGGGCAAGTGGGCGAAGGGAG...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATCCCCATTCATGTTTCTaGCTCAGGGCCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHPHSCF*LRAFAL
Trigger: CAGTGCAAAGGCCCTGAGGCAGAAACATGAATGGGG...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTTCCTCTCTCCCCGGCTaGTCCTTCTCAGTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLSSLPG*SFSVSW
Trigger: CCAAGAGACTGAGAAGGAGCAGCCGGGGAGAGAGGA...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGATTAAGCAGATGTCACTaGCTTTCCCACATCATAAGA +
Preference number: 4 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRLSRCH*LSHIIR
Trigger: TCTTATGATGTGGGAAAGGCAGTGACATCTGCTTAA...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAATGCCTCCCGTCCCTCTaGGTGCTCCCGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKCLPSL*VLPAAE
Trigger: CTCAGCCGCCGGGAGCACCCAGAGGGACGGGAGGCA...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp TTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTAATATATCCAGCACACTCTCTACATACGTGCCCTaGAGAACTCCCCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: FQQSEQSHGLLGNISSTLSTYVP*RTPPSS
Trigger: CGAAGATGGGGGAGTTCTCCAGGGCACGTATGTAGA...GAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGTCGACTTATCAAAGTaGTACACTGAATTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSVDLSK*YTEFPG
Trigger: GCCTGGAAATTCAGTGTACCACTTTGATAAGTCGAC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTCAAGTCCAGAGGCCCTaGCCCATCCGTCACAGTGTA +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAQVQRP*PIRHSV
Trigger: TACACTGTGACGGATGGGCCAGGGCCTCTGGACTTG...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCATTGGCCTTTCTGGGTaGGTCGTTGGTGATAAGGAA +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGIGLSG*VVGDKE
Trigger: TTCCTTATCACCAACGACCCACCCAGAAAGGCCAAT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTGTGAAGTCCCACCCTaGGGTCTCAACCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKACEVPP*GLNPNS
Trigger: GGAGTTGGGGTTGAGACCCCAGGGTGGGACTTCACA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATATCCGGTGTGCCGCCTTaGCCGCTGCCGCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYISGVPP*PLPLLQ
Trigger: TTGCAGCAGCGGCAGCGGCCAAGGCGGCACACCGGA...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp AACAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACAAGGAGCAGTCGGGGCTaGCTCGCACTGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: NNSAVSSPKLKIAGLVFTRSSRG*LALPPP
Trigger: AGGGGGAGGCAGTGCGAGCCAGCCCCGACTGCTCCT...TGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGGAGCTCTGTTTCCTGTaGTGTCAGTTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKELCFL*CQLALL
Trigger: CAGCAAAGCCAACTGACACCACAGGAAACAGAGCTC...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCGCCATTAGATTCTCATaGGAATGCAAACCCTATTGT +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCAIRFS*ECKPYC
Trigger: ACAATAGGGTTTGCATTCCCATGAGAATCTAATGGC...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGCCTGGATTATCTGGGTaGGTCCTAAATCCAATGACA +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVPGLSG*VLNPMT
Trigger: TGTCATTGGATTTAGGACCCACCCAGATAATCCAGG...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp TTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTaGGAAGGCCTTCGCTTTCCAGACCAAACTGACTCA +
Preference number: 4 (lower is better)
Translates to: FSHQLELTICYS*EGLRFPDQTDS
Trigger: TGAGTCAGTTTGGTCTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTTTGGCATCAGTTCAAAGTaGGGCCTCCCTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TRTHHPAEILIHMWSVWFGISSK*GLPSSV
Trigger: CACTGAAGAAGGGAGGCCTCACTTTGAACTGATGCC...AAACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTATCACTCTCAGGAATaGAATCATTCAGAGCATAGC +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTEYHSQE*NHSEHS
Trigger: GCTATGCTCTGAATGATTTCATTCCTGAGAGTGATA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCAAGACACAGAGAGTATaGAGAGAGTTGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGKTQRV*RELGGR
Trigger: TCTTCCTCCCAACTCTCTTCATACTCTCTGTGTCTT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTTGCTGGCAAAACTGTaGAGTCCCACCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKALLAKL*SPTLGS
Trigger: AGACCCCAGGGTGGGACTTCACAGTTTTGCCAGCAA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAGGAAATGTACTGTGCTaGGAAATGGGCCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSGNVLC*EMGPLP
Trigger: TGGCAAGGGGCCCATTTCTCAGCACAGTACATTTCC...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTCCCTCCCTCGCTGATTaGCAGTTCCCTGTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QQSKPIVSNSERACLINSPSLAD*QFPVPF
Trigger: GAAAGGGACAGGGAACTGTCAATCAGCGAGGGAGGG...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR TCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATAGAGCAGCTGATCCGCTaGCATCACCCAGCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYIEQLIR*HHPAPV
Trigger: CACCGGCGCTGGGTGATGTCAGCGGATCAGCTGCTC...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR TCA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATTGTTATCGAGCAGCTaGTCCGCTGACATCACCCAG +
Preference number: 4 (lower is better)
Translates to: NGFKGQQSKPIVSNSERALLSSS*SADITQ
Trigger: CTGGGTGATGTCAGCGGATCAGCTGCTCGATAACAA...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATGATTGTTCTGGCAGCTaGAGATTCACCATGCACGCA +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHDCSGS*RFTMHA
Trigger: TGCGTGCATGGTGAATCTTCAGCTGCCAGAACAATC...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACTTACAAGGGACAGGTaGCACAGAAAAGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKLTRDR*HRKEEK
Trigger: CTTCTCCTCTTTTCTGTGTCACCTGTCCCTTGTAAG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGATCATAAGAGGGGAGTaGCATGAAAAGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVIIRGE*HEKCTI
Trigger: GATTGTGCACTTTTCATGTCACTCCCCTCTTATGAT...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTTAAAACAGTTTCCCTaGTTGATTTTCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLLKQFP*LIFLTQ
Trigger: CTGTGTGAGGAAAATCAATCAGGGAAACTGTTTTAA...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp AGAGTGAACAGTCACACGGCTTACTGGGTAATATATCCAGCACACTCCATGACGACCCCTCCAGGGTGCTaGCATCAAAGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: RVNSHTAYWVIYPAHSMTTPPGC*HQRRRT
Trigger: AGTTCTTCTTCTTTGATGGCAGCACCCTGGAGGGGT...CGTCATGGAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACTGTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGAGGGCAGCTGGGGCTaGTGTTACCCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGREGSWG*CYPGCP
Trigger: TGGGCATCCTGGGTAACAGCAGCCCCAGCTGCCCTC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGGAAATTTACGAAAAGTaGCACATACTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTEEIYEK*HILSPG
Trigger: TCCAGGAGACAGTATGTGGCACTTTTCGTAAATTTC...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGGGCCCCTTGCCAGATaGTCCCCTCTCCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRGPLAR*SPLLPL
Trigger: GAGAGGAAGGAGAGGGGAGCATCTGGCAAGGGGCCC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGCTGTCTCTCTGCTGCTaGTTACCTTTTCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKLSLCC*LPFQPQ
Trigger: TTGTGGCTGAAAAGGTAAGCAGCAGCAGAGAGACAG...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATAGCTATCCATGGCGGCTaGGGACACTGCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYIAIHGG*GHCPAR
Trigger: CCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATAGC...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CCA 90 bp AAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATATCTACATACGTGCCCTaGAGAACTCCCCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: KGQQSKPIVSNSERACLISTYVP*RTPPSS
Trigger: CGAAGATGGGGGAGTTCTCCAGGGCACGTATGTAGA...TATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTCTATAATAATACCCTaGCCCTATGAGCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLSIIIP*PYEPVL
Trigger: AAGTACTGGCTCATAGGGCCAGGGTATTATTATAGA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGAGTTGTGATTACACATaGCTGGCAAAATGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTESCDYT*LAKWLK
Trigger: TTTCAGCCATTTTGCCAGCCATGTGTAATCACAACT...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCGACAACTTCCTCTCATaGGTGAACCATTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGDNFLS*VNHWLK
Trigger: CTTAAGCCAATGGTTCACCCATGAGAGGAAGTTGTC...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCACCGTATTCCCTGACCTaGCTGCACAACCCACTTGAT +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSPYSLT*LHNPLD
Trigger: ATCAAGTGGGTTGTGCAGCCAGGTCAGGGAATACGG...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTGTTTCGAGGTTCACATaGCCAAGTCTGGCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGVSRFT*PSLASD
Trigger: ATCAGAAGCCAGACTTGGCCATGTGAACCTCGAAAC...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGTACCCACACAGTCTTTaGCATGATCTTTTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVYPHSL*HDLLKE
Trigger: CTCCTTCAAAAGATCATGCCAAAGACTGTGTGGGTA...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCTGTCCAGACAGCCTCAATGCATaGTCTACAGAAATAAATGCA +
Preference number: 4 (lower is better)
Translates to: LNPGVPQGSVPDVFLLCPDSLNA*STEINA
Trigger: TGCATTTATTTCTGTAGACCATGCATTGAGGCTGTC...TGGACAGAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp TTGATCACTCCTTTCTCCTTAAAGCAGTTCCCTCCCTaGCCTTCTAGGACCTCACACTCTGCTGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LITPFSLKQFPP*PSRTSHSAVLP
Trigger: AGGCAAAACAGCAGAGTGTGAGGTCCTAGAAGGCAAGGGAGGGAACTGCTTTAAGGAGAAAGGAGTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp ACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTTTGCTCAGGCACATCAATaGCCGTTTCTTCATCAAGGG +
Preference number: 4 (lower is better)
Translates to: TRTHHPAEILIHMWSVWFAQAHQ*PFLHQG
Trigger: CCCTTGATGAAGAAACGGTCATTGATGTGCCTGAGC...AAACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTCTATTCCAGGTCTCTaGACCCCAAAGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKASIPGL*TPKPGL
Trigger: AAGGCCTGGCTTTGGGGTTCAGAGACCTGGAATAGA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAGACAGGAATCACAGCTaGCAGCTACAGATCAGCACA +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSDRNHS*QLQIST
Trigger: TGTGCTGATCTGTAGCTGTCAGCTGTGATTCCTGTC...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAAAGCAATGTGCAACTaGCAAGAAATAGCAAACTTC +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSKAMCN*QEIANF
Trigger: GAAGTTTGCTATTTCTTGTCAGTTGCACATTGCTTT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATCTTCCTGGAAGCACTaGCAACTTCCTCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSSSWKH*QLPLMG
Trigger: ACCCATGAGAGGAAGTTGTCAGTGCTTCCAGGAAGA...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCATAAATGCAATAAGATaGCGCATCCTATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECINAIR*RILSAV
Trigger: GACAGCAGATAGGATGCGTCATCTTATTGCATTTAT...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGAGTGATCCAGTTCCCTCATTACTTTCATGGCTGGTCCAGCACAGCACAGGTGCTGGCCTTAGAACTGTaGGAGAATAAATTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GVIQFPHYFHGWSSTAQVLALEL*ENKFLL
Trigger: CAACAGAAATTTATTCTCTCACAGTTCTAAGGCCAG...CACCTGTGCTGTGCTGGACCAGCCATGAAAGTAATGAGGGAACTGGATCACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCACTGTGCAGAACCCGTaGGGTAATCCGTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISTVQNP*GNPSSS
Trigger: GGACGATGACGGATTACCGCACGGGTTCTGCACAGT...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTCTCCGTCTACATACGTaGCCTGGAGAACTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QQSKPIVSNSERACLINSLRLHT*PGELPH
Trigger: ATGGGGGAGTTCTCCAGGGCACGTATGTAGACGGAG...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATCACCATGCACGCAGTTaGATTTTCCAGAAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHHHARS*IFQKQL
Trigger: CAACTGCTTCTGGAAAATGCAACTGCGTGCATGGTG...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGGGGATTATAGGCAACTaGCACCACATCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKGIIGN*HHIWLI
Trigger: AATTAGCCAGATGTGGTGGCAGTTGCCTATAATCCC...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCCAACTTTTACTTGAATaGCCAGTTCTGAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCQLLLE*PVLKIC
Trigger: GCAAATTTTCAGAACTGGGCATTCAAGTAAAAGTTG...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp TTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGTCTACATACGTGCCCTaGAGAACTCCCCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: LKWLPECDFEFLREAYVLSTYVP*RTPPSS
Trigger: CGAAGATGGGGGAGTTCTCCAGGGCACGTATGTAGA...CAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSSVSYS*AGPFSS
Trigger: AGAGCTGAACGGTCCAGCCCAGGAATATGACACAGA...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp ATCTTTATACTGCCCCTTGAAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IFILPLEDQSPICVIFLGSVSYS*AGPFSS
Trigger: AGAGCTGAACGGTCCAGCCCAGGAATATGACACAGA...GCCCAGGAATATGACACAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CCA 90 bp ACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTTTTCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TRTHHPAEILIHMWSVWFSVSYS*AGPFSS
Trigger: AGAGCTGAACGGTCCAGCCCAGGAATATGACACAGA...AAACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTTCATGGGTGAACCATTaGCTTAAGCTTTCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGSWVNH*LKLSSR
Trigger: CCTGCTTGAAAGCTTAAGCCAATGGTTCACCCATGA...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGATATGTTGATACATTaGCATGTGTGTTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSDMLIH*HVCSYC
Trigger: GCAATACGAACACACATGCCAATGTATCAACATATC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAATGCTTAGGTGCGGCTTaGCGCGCCCCGAGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKCLGAA*RAPSAQ
Trigger: TTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCA...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp GAGGGCATGCCTCATAAACTCTTGGTGTCAGCTGTGGTGACTCTCAGGTTTCACCTGATTTTGCAGAGGTaGGTGAAAATGAAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: EGMPHKLLVSAVVTLRFHLILQR*VKMKAV
Trigger: TACTGCCTTCATTTTCACCCACCTCTGCAAAATCAG...GTGAAACCTGAGAGTCACCACAGCTGACACCAAGAGTTTATGAGGCATGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CCA 90 bp AAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGACACAGATGTGGGATCTTTaGGAGTGGAGCCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: KWLPECDFEFLREAYVLTQMWDL*EWSPKS
Trigger: AGATTTGGGGCTCCACTCCCAAAGATCCCACATCTG...TGTCAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCACTTTATACTGCCCCTTaGAGATCAGTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: NGFKGQQSKPIVSNSERALYTAP*RSVSHL
Trigger: CAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAG...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR TCA 90 bp AAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGACACTTTATACTGCCCCTTaGAGATCAGTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: KWLPECDFEFLREAYVLTLYTAP*RSVSHL
Trigger: CAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAG...TGTCAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp GAGGGCATGCCTCATAAACTCTTGGTGTCAGCTGTGGTGACTCTCAGGTTTCACATCCAGCACACTCCATaGCGAATGTTATCTTTATAC +
Preference number: 4 (lower is better)
Translates to: EGMPHKLLVSAVVTLRFHIQHTP*RMLSLY
Trigger: GTATAAAGATAACATTCGTCATGGAGTGTGCTGGAT...GTGAAACCTGAGAGTCACCACAGCTGACACCAAGAGTTTATGAGGCATGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTGTGACGTCACAGCATaGGCAGTCCCTGGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQCDVTA*AVPGCP
Trigger: GGGACAACCAGGGACTGCTCATGCTGTGACGTCACA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAAAGCCATCTTTCTCCTaGAGACAGTCACTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSKPSFS*RQSLPL
Trigger: CAAAGGGAGTGACTGTCTTCAGGAGAAAGATGGCTT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGGGAGGAAGACATGGTaGGGCTCAGCGTGGATGCAT +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRGRKTW*GSAWMH
Trigger: ATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAAACTGTGCAGAACCCGTaGGGTAATCCGTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKTVQNP*GNPSSS
Trigger: GGACGATGACGGATTACCGCACGGGTTCTGCACAGT...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTACCCCTCCAGGGTGCTaGCATCAAAGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKATPPGC*HQRRRT
Trigger: AGTTCTTCTTCTTTGATGGCAGCACCCTGGAGGGGT...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTCAGGCCTTTCACTTTTaGTGGGTGGCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRQAFHF*WVAWKA
Trigger: GGCCTTCCAGGCCACCCAGCAAAAGTGAAAGGCCTG...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTTTTCTCCTTATTTCTaGAGTTGTGATTACACATGG +
Preference number: 4 (lower is better)
Translates to: PEALAHPSQCIERSLSTEFSPYF*SCDYTW
Trigger: CCATGTGTAATCACAACTGCAGAAATAAGGAGAAAA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTGAGGCTCAGCGTGGATaGATTGCTTCCTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAEAQRG*IASSDL
Trigger: CAAATCAGAGGAAGCAATGCATCCACGCTGAGCCTC...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAATGCCGCCTTGGCCGCTaGCGCTGCTGCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKCRLGR*RCCNFL
Trigger: GAGAAAGTTGCAGCAGCGGCAGCGGCCAAGGCGGCA...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAATCCTTGGCCTTCAGCTaGTGCGGCAGCAGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKSLAFS*CGSSRR
Trigger: ACGACGGCTGCTGCCGCAGCAGCTGAAGGCCAAGGA...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp GAACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTAAGGCTTCCTCCATCTaGGTAATATATCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: ELVLITQLKSLSTCGQSGKASSI*VIYPAH
Trigger: GTGTGCTGGATATATTACCCAGATGGAGGAAGCCTT...ACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp AAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGACAAGGAGGCACAGTACTTaGATACGTGGTTATAGGGCT +
Preference number: 4 (lower is better)
Translates to: KWLPECDFEFLREAYVLTRRHST*IRGYRA
Trigger: AGCCCTATAACCACGTATCCAAGTACTGTGCCTCCT...TGTCAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGGGTTCAAAGAGCTCTTaGAAAACTAATTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLGSKSS*KTNFLL
Trigger: AAGAAGGAAATTAGTTTTCCAAGAGCTCTTTGAACC...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTACATTTGGCCTCATTaGCCTTTCTGGGTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAYIWPH*PFWVGR
Trigger: ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTGGACGTCTCTCTCTCTaGTTGGAAGTTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAGRLSL*LEVWCL
Trigger: CAAGCACCAAACTTCCAACCAGAGAGAGAGACGTCC...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CAGATCTTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATTGGGATCTTTGGGAGTaGAGCCCCAAATCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QILKWLPECDFEFLREAYWDLWE*SPKSAS
Trigger: AGAAGCAGATTTGGGGCTCCACTCCCAAAGATCCCA...ATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTTGGGTTTTGCCATGTTaGCCATGGCTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLWVLPC*PWLVLN
Trigger: GTTCAAGACCAGCCATGGCCAACATGGCAAAACCCA...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATCCCTGGTTGAGACCATaGGTCCGTGGCTTTAGATGC +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMILISLENPWLRP*VRGFRC
Trigger: GCATCTAAAGCCACGGACCCATGGTCTCAACCAGGG...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp AAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGACAAGATGCAGTTTGGAGTaGAGGAGTGATTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KWLPECDFEFLREAYVLTRCSLE*RSDLPC
Trigger: ACAAGGCAAATCACTCCTTCACTCCAAACTGCATCT...TGTCAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTCTGAGTGAATCTCCTTaGGATTACAGTGTCGCACAC +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKALSESP*DYSVAH
Trigger: GTGTGCGACACTGTAATCTCAAGGAGATTCACTCAG...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAATAGTCTTCCAGAGCTaGGACAGGAAATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSIVFQS*DRKCTV
Trigger: CACAGTACATTTCCTGTCTCAGCTCTGGAAGACTAT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AACAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACAGTGCCGGGAGCAACTTaGAAGTCCGTCGTGCACTGT +
Preference number: 4 (lower is better)
Translates to: NNSAVSSPKLKIAGLVFTVPGAT*KSVVHC
Trigger: ACAGTGCACGACGGACTTTCAAGTTGCTCCCGGCAC...TGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR TCA 90 bp GAAGCCTATGTTCTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCCCAGAGTGCGATTTTaGGTTCTTGAGGGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: EAYVLTIAIISRQSSFHSPRVRF*VLEGSL
Trigger: TAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGG...CGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAGAACATAGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCACCCCTCCAGGGTGCTaGCATCAAAGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISTPPGC*HQRRRT
Trigger: AGTTCTTCTTCTTTGATGGCAGCACCCTGGAGGGGT...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp ACTGAAGCCTTCTCTCATCAGCTGGAGCTCACTATCTGCTACAGCTTGGAAGGCATGTTATCTTTATACTaGCCCTTGAAGATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TEAFSHQLELTICYSLEGMLSLY*PLKISL
Trigger: GAGACTGATCTTCAAGGGGCAGTATAAAGATAACAT...GCCTTCCAAGCTGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGGCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAATCTCTTTTGCTTAGGTaGGGCTTGGCGCGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKSLLLR*GLARPE
Trigger: CTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGA...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATCAGCGTTTCTCTTTTaGTTAGGTGCGGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKSAFLF*LGAAWR
Trigger: GCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGA...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR GCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATCTGCCTCAGGGCCTTTaGACTGACTTTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHLPQGL*TDFLFC
Trigger: ACAAAATAAAAAGTCAGTGCAAAGGCCCTGAGGCAG...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATGCTTATTCACCCAGCTaGCCACTCATCAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMILISLENAYSPS*PLISST
Trigger: AGTGGAGCTGATGAGTGGGCAGCTGGGTGAATAAGC...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp ACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTTTCTAATCAAGTCCTGCTaGTTTGAGGGTCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TRTHHPAEILIHMWSVWFLIKSC*FEGLFP
Trigger: GGGAAAAAGACCCTCAAACCAGCAGGACTTGATTAG...AAACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTCTCCCTCTCATCTTCTaGAGACAAAGAAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLLPLIF*RQRRGR
Trigger: TCTCCCTCTTCTTTGTCTCCAGAAGATGAGAGGGAG...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp CAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTAATATACTTTATACTGCCCCTTaGAGATCAGTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: QYVTFQQSEQSHGLLGNILYTAP*RSVSHL
Trigger: CAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAG...TATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR TCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCTCCCACAGCTACCTTTaGAAAAAGTCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISSHSYL*KKSFSS
Trigger: GCTGGAGAAGGACTTTTTTCAAAGGTAGCTGTGGGA...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTCATGGTGAGAGGATGTaGCGTCACAGCATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRHGERM*RHSMSS
Trigger: ACTGCTCATGCTGTGACGTCACATCCTCTCACCATG...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGTTGCTAACGCATGGTaGGAGGATGTGACGTCACAG +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQVANAW*EDVTSQ
Trigger: CTGTGACGTCACATCCTCTCACCATGCGTTAGCAAC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGACTGTGCCACAAGCCTaGCCGCGCTATGTTATGTAC +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQTVPQA*PRYVMY
Trigger: GTACATAACATAGCGCGGTCAGGCTTGTGGCACAGT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGCTGCACAACCCACTTaGTCGAGGTTAATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQAAQPT*SRLMQA
Trigger: GGCTTGCATTAACCTCGATCAAGTGGGTTGTGCAGC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCTTAAGACAGAAGCTTaGGGCAACTGTTTTAAAACA +
Preference number: 4 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGLKTEA*GNCFKT
Trigger: TGTTTTAAAACAGTTGCCTCAAGCTTCTGTCTTAAG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGACAGGGAAGCCTATGTTCTaGCAATTGCCATTATCAGTA +
Preference number: 4 (lower is better)
Translates to: KWLPECDFEFLREAYVLTGKPMF*QLPLSV
Trigger: TACTGATAATGGCAATTGTCAGAACATAGGCTTCCC...TGTCAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TCTTTTGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTCAACTCATCATTCAGCTGTACTTTTGAGTaGCACCTATTATTCCACCTG +
Preference number: 4 (lower is better)
Translates to: SFEGDLPPFQWVQVNSSFSCTFE*HLLFHL
Trigger: CAGGTGGAATAATAGGTGTCACTCAAAAGTACAGCT...GAATGATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATTGTTGTCTTGGTTCCTaGAGTGATTATACTATGCTC +
Preference number: 4 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHCCLGS*SDYTML
Trigger: GAGCATAGTATAATCACTTCAGGAACCAAGACAACA...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp TACATTTTACTCTTCATTGTGAAGAGTCACAGTATGTTACTTTCCAGCAGAGTGACTGTGCAGAACCCGTaGGGTAATCCGTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: YILLFIVKSHSMLLSSRVTVQNP*GNPSSS
Trigger: GGACGATGACGGATTACCGCACGGGTTCTGCACAGT...CACTCTGCTGGAAAGTAACATACTGTGACTCTTCACAATGAAGAGTAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR GCA 90 bp CTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCTTTTATCTTTTCTCCGTCTACATACGTaGCCTGGAGAACTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LTIAIISRQSSFHSLLSFLRLHT*PGELPH
Trigger: ATGGGGGAGTTCTCCAGGGCACGTATGTAGACGGAG...AAAAGATAAAAGCGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTTCTCTCCACGTCAGGTaGAACAACGCCGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRSLHVR*NNAEEV
Trigger: AACTTCCTCGGCGTTGTTGCACCTGACGTGGAGAGA...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp AGTCACACGGCTTACTGGGTAATATATCCAGCACACTCCATGACGAATGTTATCAACAGTGAGAGGGCATaGCTCATAAACTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SHTAYWVIYPAHSMTNVINSERA*LINSWC
Trigger: ACACCAAGAGTTTATGAGGCATGCCCTCTCACTGTT...GATAACATTCGTCATGGAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR GCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTAATATACCCAGAATCTaGCCACATCTTACCACCTCC +
Preference number: 4 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLNIPRI*PHLTTS
Trigger: GGAGGTGGTAAGATGTGGGCAGATTCTGGGTATATT...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATAGTCATATTCCTGGGCTaGACCGTTCAGCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYIVIFLG*TVQLSV
Trigger: GACGGAGAGCTGAACGGTCCAGCCCAGGAATATGAC...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTAAGGCTTCCTCCATCTaGGTAATATATCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAKASSI*VIYPAH
Trigger: GTGTGCTGGATATATTACCCAGATGGAGGAAGCCTT...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTTACTGTGCTGAGAAATaGGCCCCTTGCCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRYCAEK*APCQML
Trigger: GAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTA...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCACTGAAAGCATACCCCTaGCTTCTACTTCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSLKAYP*LLLLQH
Trigger: ATGTTGAAGAAGTAGAAGCCAGGGGTATGCTTTCAG...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
3UTR CAA 72 bp CTTGAATGCCCAGTTCTGAAAATTTGCTACTGTGAGTaGATCACTCCTTTCTCCTTAAAGCAGTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LECPVLKICYCE*ITPFSLKQFPP
Trigger: GGGAGGGAACTGCTTTAAGGAGAAAGGAGTGATCAACTCACAGTAGCAAATTTTCAGAACTGGGCATTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
3UTR CAA 72 bp AGCTCAAGATTTAAGTTGTCTCTTCTGGATGTCCATTaGGTGGAAAACCCACCCAGTCATCTCATGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSRFKLSLLDVH*VENPPSHLMLL
Trigger: AAGCAGCATGAGATGACTGGGTGGGTTTTCCACCAAATGGACATCCAGAAGAGACAACTTAAATCTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCACCTACACACTGCTATTaGTGCAAAAATCCATTTGGA +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSPTHCY*CKNPFG
Trigger: TCCAAATGGATTTTTGCATCAATAGCAGTGTGTAGG...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GAACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTTCTCCCATATTAGCCTaGAGAAAATTCCAAATATCC +
Preference number: 4 (lower is better)
Translates to: ELVLITQLKSLSTCGQSGSPILA*RKFQIS
Trigger: GGATATTTGGAATTTTCTTCAGGCTAATATGGGAGA...ACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TCTTTTGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTCAACTCATCATTCACACAGTCTTTGGCATaGTCTTTTGAAGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: SFEGDLPPFQWVQVNSSFTQSLA*SFEGDL
Trigger: CAAATCTCCTTCAAAAGATCATGCCAAAGACTGTGT...GAATGATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp TCTTTTGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTCAACTCATCATTCTCTTGGTTCCTGAAGTaGTTATACTATGCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SFEGDLPPFQWVQVNSSFSWFLK*LYYALV
Trigger: TACCAGAGCATAGTATAATCACTTCAGGAACCAAGA...GAATGATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAACTCCGTCTACATACGTaGCCTGGAGAACTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKLRLHT*PGELPH
Trigger: ATGGGGGAGTTCTCCAGGGCACGTATGTAGACGGAG...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGGGAAGATCTGGTCATaGAGGAGTTGGACTGAGACA +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRGKIWS*RSWTET
Trigger: TGTCTCAGTCCAACTCCTGCATGACCAGATCTTCCC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTCAGAAGGTAGAGATTaGTGGCAAAACTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKASEGRD*WQNCEV
Trigger: GACTTCACAGTTTTGCCAGCAATCTCTACCTTCTGA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGGTCTACAGAAATAAATaGAATAAGATGACGCATCCT +
Preference number: 4 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKVYRNK*NKMTHP
Trigger: AGGATGCGTCATCTTATTGCATTTATTTCTGTAGAC...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTCTATCTGCTACAGCTTaGAAGGCCTTCGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRLSATA*KAFAFQ
Trigger: CTGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAG...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAAGCCCTTTCAATTCCTTaGCCTTCAGCTGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKALSIP*PSAAAA
Trigger: TGCCGCAGCAGCTGAAGGCCAAGGAATTGAAAGGGC...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CCA 90 bp CAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTAATATAAGTCACACGGCTTACTaGGTAATATATCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: QYVTFQQSEQSHGLLGNISHTAY*VIYPAH
Trigger: GTGTGCTGGATATATTACCCAGTAAGCCGTGTGACT...TATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR TCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTCTTTATACTGCCCCTTaGAGATCAGTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRLYTAP*RSVSHL
Trigger: CAGATGGGAGACTGATCTTCAAGGGGCAGTATAAAG...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AGTCACACGGCTTACTGGGTAATATATCCAGCACACTCCATGACGAATGTTATCATCCAGCACACTCCATaGCGAATGTTATCTTTATAC +
Preference number: 4 (lower is better)
Translates to: SHTAYWVIYPAHSMTNVIIQHTP*RMLSLY
Trigger: GTATAAAGATAACATTCGTCATGGAGTGTGCTGGAT...GATAACATTCGTCATGGAGTGTGCTGGATATATTACCCAGTAAGCCGTGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR TCA 90 bp CAGATCTTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATATCCAGCACACTCCATaGCGAATGTTATCTTTATAC +
Preference number: 4 (lower is better)
Translates to: QILKWLPECDFEFLREAYIQHTP*RMLSLY
Trigger: GTATAAAGATAACATTCGTCATGGAGTGTGCTGGAT...ATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAAGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTTTGCTGTTTGACTTTTaGATTCAATGCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CLMSNARQYLSVGRCCKALLFDF*IQCTVP
Trigger: TGGCACAGTGCATTGAATTCAAAAGTCAAACAGCAA...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATGTGGTTGTATGGCTTaGAATAGTTTCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSCGCMA*NSFIAL
Trigger: CAAAGCAATGAAACTATTTCAAGCCATACAACCACA...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGGTTGCAATAAATGCTaGAAGCATACCCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQGCNKC*KHTPGF
Trigger: GAAGCCAGGGGTATGCTTTCAGCATTTATTGCAACC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTGAAAATTTGCTACTGTaGGTTGATCACTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLENLLL*VDHSFL
Trigger: GAGAAAGGAGTGATCAACTCACAGTAGCAAATTTTC...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp AAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAATGTTATCTTTATACTaGCCCTTGAAGATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KGQQSKPIVSNSERACLIMLSLY*PLKISL
Trigger: GAGACTGATCTTCAAGGGGCAGTATAAAGATAACAT...TATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp GAAGCCTATGTTCTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGAAATTTCCCATAAAGTaGGGTCCTCTCATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: EAYVLTIAIISRQSSFHSKFPIK*GPLIRV
Trigger: TACCCTGATGAGAGGACCGCACTTTATGGGAAATTT...CGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAGAACATAGGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTTGCTTCCTCTGATTTaGGTGGAGGTCACAGACACA +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQLLPLI*VEVTDT
Trigger: TGTGTCTGTGACCTCCACGCAAATCAGAGGAAGCAA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTACTCCGATTCCAACCTaGCACAGAGCCTTACATTTG +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRTPIPT*HRALHL
Trigger: CAAATGTAAGGCTCTGTGGCAGGTTGGAATCGGAGT...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTGGAATCTTCCACGTCTaGTGTGATTCTGATGCGATG +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRGIFHV*CDSDAM
Trigger: CATCGCATCAGAATCACAGCAGACGTGGAAGATTCC...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCGTCGACTTATCAAAGTaGTACACTGAATTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISVDLSK*YTEFPG
Trigger: GCCTGGAAATTCAGTGTACCACTTTGATAAGTCGAC...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCATCGTAGATGCAGTTTaGAGTGAAGGAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISIVDAV*SEGVIC
Trigger: GCAAATCACTCCTTCACTCCAAACTGCATCTACGAT...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGCCTTCTCTCATCAGCTaGAGCTCACTATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQPSLIS*SSLSAT
Trigger: TGTAGCAGATAGTGAGCTCCAGCTGATGAGAGAAGG...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAAAGTCACACGGCTTACTaGGTAATATATCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKSHTAY*VIYPAH
Trigger: GTGTGCTGGATATATTACCCAGTAAGCCGTGTGACT...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
3UTR CAA 72 bp ATCTTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTaGAGGGAAGCCTATGTTCTGACAATTGCCATTATC +
Preference number: 4 (lower is better)
Translates to: ILKWLPECDFEF*REAYVLTIAII
Trigger: GATAATGGCAATTGTCAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
3UTR CAA 72 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTaGATAAGCCTTGAGAATTCACTCCAATGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMI*ISLENSLQCQA
Trigger: TGCTTGACATTGGAGTGAATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGCCGTTCTTTTCTCCGTaGACAAAGTTCCCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQPFFSP*TKFPSN
Trigger: ATTTGAGGGGAACTTTGTTCACGGAGAAAAGAACGG...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTCACAGACACACTGCTaGGTTTTAAGCTCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQSQTHC*VLSSEC
Trigger: ACACTCTGAGCTTAAAACTCAGCAGTGTGTCTGTGA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp AACAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATACTTTCCAGCAGAGTaGACAGTCACACGGCTTACT +
Preference number: 4 (lower is better)
Translates to: NNSAVSSPKLKIAGLVFTYFPAE*TVTRLT
Trigger: AGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTA...TGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR TCA 90 bp GAAGCCTATGTTCTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGACACATATAAGATCATaGACTCGTACTCATCACCCA +
Preference number: 4 (lower is better)
Translates to: EAYVLTIAIISRQSSFHSTHIRS*TRTHHP
Trigger: TGGGTGATGAGTACGAGTTCATGATCTTATATGTGT...CGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAGAACATAGGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATGTCACTGTAGTGAGTTaGATCATGGCTCACAAAAAG +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMILISLENVTVVS*IMAHKK
Trigger: CTTTTTGTGAGCCATGATTCAACTCACTACAGTGAC...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR TCA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATAAGAGGGGAGTGACATaGAAAGTGCACAATCTTGTT +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMILISLENKRGVT*KVHNLV
Trigger: AACAAGATTGTGCACTTTTCATGTCACTCCCCTCTT...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAAACCCCTCCAGGGTGCTaGCATCAAAGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKTPPGC*HQRRRT
Trigger: AGTTCTTCTTCTTTGATGGCAGCACCCTGGAGGGGT...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTAGGCGTTCTCACATATaGAGAGAGAAGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRRRSHI*REKRKE
Trigger: CTCTTTCCTCTTCTCTCTGCATATGTGAGAACGCCT...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCTTTTATCTTTTGTGGAGCCCCAAATCTaGTTCTTTTACACGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTIAIISRQSSFHSLLSFVEPQI*FFYTFP
Trigger: TGGGAACGTGTAAAAGAAGCAGATTTGGGGCTCCAC...AAAAGATAAAAGCGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTCTGCTGTCAACCTCTTaGTGTGTAATTCGAACTCCA +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRLLSTS*CVIRTP
Trigger: TGGAGTTCGAATTACACACCAAGAGGTTGACAGCAG...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGATTCAGTTCCTTTGGTaGGCAATCTTCCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQIQFLW*AIFLEA
Trigger: TGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAAT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp CAGATCTTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATATCCTTATCCACATGTaGTCAGTCTGGTTTTATCTA +
Preference number: 4 (lower is better)
Translates to: QILKWLPECDFEFLREAYILIHM*SVWFYL
Trigger: TAGATAAAACCAGACTGACCACATGTGGATAAGGAT...ATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAAGATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR TCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGGGCTGGCAAAATGGCTaGAATGCTATTGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQGWQNG*NAIDSV
Trigger: AACACTATCAATAGCATTTCAGCCATTTTGCCAGCC...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR TCA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATTTGAATGCCCAGTTCTaGAAATTTGCTACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMILISLENLNAQF*KFATVS
Trigger: ACTCACAGTAGCAAATTTTCAGAACTGGGCATTCAA...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTAATATAATGTTATCTTTATACTaGCCCTTGAAGATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QYVTFQQSEQSHGLLGNIMLSLY*PLKISL
Trigger: GAGACTGATCTTCAAGGGGCAGTATAAAGATAACAT...TATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR GCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTACTCTCTTGCATCATaGACCCAGACACACTACAAA +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQYSLAS*TQTHYK
Trigger: TTTGTAGTGTGTCTGGGTGCATGATGCAAGAGAGTA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR GCA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATAAACAGTGAGAGGGCATaGCTCATAAACTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYINSERA*LINSWC
Trigger: ACACCAAGAGTTTATGAGGCATGCCCTCTCACTGTT...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR GCA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCCACTATAAAGAGGAATaGCAGCTTTTCTGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: SVWFYLHPHFTSLISHISHYKEE*QLFCVL
Trigger: TAGAACACAGAAAAGCTGGCATTCCTCTTTATAGTG...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp GAAGCCTATGTTCTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGTATCTAATCAAGTCCTaGTGGTTTGAGGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: EAYVLTIAIISRQSSFHSYLIKS*WFEGLF
Trigger: AAAAAGACCCTCAAACCAGCAGGACTTGATTAGATA...CGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAGAACATAGGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp CTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCTTTTATCTTTTCTGCTGTCAACCTCTTaGTGTGTAATTCGAACTCCA +
Preference number: 4 (lower is better)
Translates to: LTIAIISRQSSFHSLLSFLLSTS*CVIRTP
Trigger: TGGAGTTCGAATTACACACCAAGAGGTTGACAGCAG...AAAAGATAAAAGCGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGATCGTAGATGCAGTTTaGAGTGAAGGAGTGATTTGC +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQIVDAV*SEGVIC
Trigger: GCAAATCACTCCTTCACTCCAAACTGCATCTACGAT...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp TACATTTTACTCTTCATTGTGAAGAGTCACAGTATGTTACTTTCCAGCAGAGTGTCCAGGTGCCCTTATTaGTGTCTTCCCAATCATTCT +
Preference number: 4 (lower is better)
Translates to: YILLFIVKSHSMLLSSRVSRCPY*CLPNHS
Trigger: AGAATGATTGGGAAGACACCAATAAGGGCACCTGGA...CACTCTGCTGGAAAGTAACATACTGTGACTCTTCACAATGAAGAGTAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CCA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTTTAAGGATTTCATGGTaGAATCATCCTGGATTATCT +
Preference number: 4 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLLRISW*NHPGLS
Trigger: AGATAATCCAGGATGATTCCACCATGAAATCCTTAA...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTGGCATCTCCGAATGTaGTACAGATTTAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQWHLRM*YRFRLE
Trigger: TTCAAGTCTAAATCTGTACCACATTCGGAGATGCCA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp ACCCCTGGCTTCTACTTCTTCAACATACCTCACAACCTAATAAATGTATTTCAGTTCAGTCTAATCATTTaGCATCTCCGAATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TPGFYFFNIPHNLINVFQFSLII*HLRMWY
Trigger: GTACCACATTCGGAGATGCCAAATGATTAGACTGAA...CTGAAATACATTTATTAGGTTGTGAGGTATGTTGAAGAAGTAGAAGCCAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CCA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAACTACTGGCTTTTTCTTaGGGTAATAACCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKLLAFS*GNNLPP
Trigger: CGGTGGAAGGTTATTACCCCAAGAAAAAGCCAGTAG...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CCA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATTTGTTGTTTTGTGACTaGCTTATTTCACTTAGCATC +
Preference number: 4 (lower is better)
Translates to: WVQVNSSFHEMILISLENLLFCD*LISLSI
Trigger: GATGCTAAGTGAAATAAGCCAGTCACAAAACAACAA...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR GCA 90 bp CTGACAATTGCCATTATCAGTAGGCAGAGTTCATTCCATTCGCTTTTATCTTTTATGTTATCTTTATACTaGCCCTTGAAGATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LTIAIISRQSSFHSLLSFMLSLY*PLKISL
Trigger: GAGACTGATCTTCAAGGGGCAGTATAAAGATAACAT...AAAAGATAAAAGCGAATGGAATGAACTCTGCCTACTGATAATGGCAATTGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR GCA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTTTAATACGGCACATATaGAAGTGTGCTAACACAATT +
Preference number: 4 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRLIRHI*KCANTI
Trigger: AATTGTGTTAGCACACTTGCATATGTGCCGTATTAA...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS GCA 90 bp GTCGTCGCTATCCATGGCGGCTGGGGACACTGCCCAGCTCGGGGCTaGGCGGCTGCCTCCCGTCCCTCTGGGTGCTCCCGGCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VVAIHGGWGHCPARG*AAASRPSGCSRRLS
Trigger: GCTCAGCCGCCGGGAGCACCCAGAGGGACGGGAGGCAGCCGCGCAGCCCCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATAGCGACGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000506866.6
CDS GCA 90 bp TATCCATGGCGGCTGGGGACACTGCCCAGCTCGGGGCTGCGCGGCTaGCTCCCGTCCCTCTGGGTGCTCCCGGCGGCTGAGCGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: YPWRLGTLPSSGLRG*LPSLWVLPAAERAL
Trigger: CAGAGCTCGCTCAGCCGCCGGGAGCACCCAGAGGGACGGGAGGCAGCCGCGCAGCCCCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000506866.6
CDS CCA 90 bp AGCGCTCAACGCGGTCCTGGGCGCTGCGGGCTTCTCGCGGACACTTaGACCGCCCGTAGGGGCTCCGAGCTCCCGACCTCCCGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SAQRGPGRCGLLADT*TARRGSELPTSRCA
Trigger: GGCACAACGGGAGGTCGGGAGCTCGGAGCCCCTACGGGCGGTCCAAGTGTCCGCGAGAAGCCCGCAGCGCCCAGGACCGCGTTGAGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 90 bp GGTGCCCTTCCACCGCCTCCTCCACCATCTCGTCGTCGCTATCCATaGCGGCTGGGGACACTGCCCAGCTCGGGGCTGCGCGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GALPPPPPPSRRRYP*RLGTLPSSGLRGCL
Trigger: GAGGCAGCCGCGCAGCCCCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACGAGATGGTGGAGGAGGCGGTGGAAGGGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000506866.6
CDS CCA 90 bp CCCGCCTCCGGCCCGTCAGCGTTTCTCTTTTGCTTAGGTGCGGCTTaGCGCGCCCCGAGCGCTCAACGCGGTCCTGGGCGCTGCGGGCTT +
Preference number: 5 (lower is better)
Translates to: PASGPSAFLFCLGAA*RAPSAQRGPGRCGL
Trigger: AAGCCCGCAGCGCCCAGGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS GCA 90 bp CAGCCAACCCGCCTCCGGCCCGTCAGCGTTTCTCTTTTGCTTAGGTaGGGCTTGGCGCGCCCCGAGCGCTCAACGCGGTCCTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: QPTRLRPVSVSLLLR*GLARPERSTRSWAL
Trigger: CAGCGCCCAGGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGGTTGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS GCA 90 bp CCGCGTCCCAGCCAACCCGCCTCCGGCCCGTCAGCGTTTCTCTTTTaGTTAGGTGCGGCTTGGCGCGCCCCGAGCGCTCAACGCGGTCCT +
Preference number: 5 (lower is better)
Translates to: PRPSQPASGPSAFLF*LGAAWRAPSAQRGP
Trigger: AGGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGGTTGGCTGGGACGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 90 bp AATAACCTTCCACCGCCTCCTCCACCATCTCGTCGTCGCTATCCATaGCGGCTGGGGACACTGCCCAGCTCGGGGCTGCGCGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NNLPPPPPPSRRRYP*RLGTLPSSGLRGCL
Trigger: GAGGCAGCCGCGCAGCCCCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACGAGATGGTGGAGGAGGCGGTGGAAGGTTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CAA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGCCCCTGAGCAGGGAGTaGAGGAGCGGTCCAGCGTCC +
Preference number: 5 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEPLSRE*RSGPAS
Trigger: GGACGCTGGACCGCTCCTCAACTCCCTGCTCAGGGG...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS CCA 90 bp TCGCGAGTTTGGAGGAGGAGGAGGAAGAGGAGGAGCAGTCGGGGCTaGCTCGCACTGCCTCCCCCTACAGCCCTTTCAATTCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SRVWRRRRKRRSSRG*LALPPPTALSIPWP
Trigger: AGGCCAAGGAATTGAAAGGGCTGTAGGGGGAGGCAGTGCGAGCCAGCCCCGACTGCTCCTCCTCTTCCTCCTCCTCCTCCAAACTCGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGTTCCTGATCCTGCCCTaGACACCCCCGCCTCCAACC +
Preference number: 5 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEFLILP*TPPPPT
Trigger: GGTTGGAGGCGGGGGTGTCAAGGGCAGGATCAGGAA...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CAGTTGGCTTTGCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGCAGCTGCCGTGGGACTaGGGAGGGCTTTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: QLALLAIMNSGPLLGRAEQLPWD*GGLSVE
Trigger: CTCTACAGAAAGCCCTCCCAAGTCCCACGGCAGCTG...CTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGCAAAGCCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 90 bp GTGGTCATAGCCATAGGCAACGGTGAGCTCTTCATCGGCCTCCACTaGTCTCAGGGTGCGGATGCATTTGATGGGCCCAAAACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: VVIAIGNGELFIGLH*SQGADAFDGPKTGV
Trigger: CACCCCCGTTTTGGGCCCATCAAATGCATCCGCACCCTGAGAGCAGTGGAGGCCGATGAAGAGCTCACCGTTGCCTATGGCTATGACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp ACAGTTTCCCTGATTGATTTTCCTCACACAGCCCCCGCTGCTGTTAAGGACAAGACTCGGGCCCGCTGCTaGGGCGTGCAGAGGGGACCT +
Preference number: 5 (lower is better)
Translates to: TVSLIDFPHTAPAAVKDKTRARC*GVQRGP
Trigger: AGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGT...CTTGTCCTTAACAGCAGCGGGGGCTGTGTGAGGAAAATCAATCAGGGAAACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 90 bp GCTGCAACTTTCTCCTGTAATACCCTCTCTTTGTTATCGAGCAGCTaGTCCGCTGACATCACCCAGCGCCGGTGCGCTCCCTCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: AATFSCNTLSLLSSS*SADITQRRCAPSLA
Trigger: AGCGAGGGAGGGAGCGCACCGGCGCTGGGTGATGTCAGCGGATCAGCTGCTCGATAACAAAGAGAGGGTATTACAGGAGAAAGTTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 90 bp CTATTCCAGGTCTCTGAACCCCAAAGCCAGGCCTTTCACTTTTGCTaGGTGGCCTGGAAGGCCTTCAGCTCCACCTGGTACCACTCAGGG +
Preference number: 5 (lower is better)
Translates to: LFQVSEPQSQAFHFC*VAWKAFSSTWYHSG
Trigger: CCCTGAGTGGTACCAGGTGGAGCTGAAGGCCTTCCAGGCCACCCAGCAAAAGTGAAAGGCCTGGCTTTGGGGTTCAGAGACCTGGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAGGGTGCGGATGCATTaGATGGGCCCAAAACGGGGG +
Preference number: 5 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSRVRMH*MGPKRG
Trigger: CCCCCGTTTTGGGCCCATCAAATGCATCCGCACCCT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS TCA 90 bp CTCCGTGAACAAAGTTCCCCTCAAATCTGTCTGTGGAGGAGTAGGTaGCTGTGCAGAACCCGTGCGGTAATCCGTCATCGTCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: LREQSSPQICLWRSR*LCRTRAVIRHRPGA
Trigger: GGCACCTGGACGATGACGGATTACCGCACGGGTTCTGCACAGTCACCTACTCCTCCACAGACAGATTTGAGGGGAACTTTGTTCACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
ENST00000608795.5
CDS GCA 90 bp TCCGTCATCGTCCAGGTGCCCTTGCGGCTGCATCATGTCAATCTCTaGCTCTGTGGTCACATCACTGCCTCCTTTTCTCTGTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SVIVQVPLRLHHVNL*LCGHITASFSLCVS
Trigger: GGAGACACACAGAGAAAAGGAGGCAGTGATGTGACCACAGAGGCAGAGATTGACATGATGCAGCCGCAAGGGCACCTGGACGATGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608795.5
CDS CCA 90 bp CTGCCCCTTGAAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTaGACCGTTCAGCTCTCCGTCTACATACGTGCCCTGGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: LPLEDQSPICVIFLG*TVQLSVYIRALENS
Trigger: GGAGTTCTCCAGGGCACGTATGTAGACGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTTCAAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
CDS-3UTR CAA 90 bp AACGGATTCAAGGGCCAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATTGCTTAGGTGCGGCTaGGCGCGCCCCGAGCGCTCA +
Preference number: 5 (lower is better)
Translates to: NGFKGQQSKPIVSNSERALLRCG*ARPERS
Trigger: TGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAA...TGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTGGCCCTTGAATCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGAAGCTCTCAGCATCTCTaGCCTGGAGTATTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRSSQHL*PGVLQS
Trigger: GGACTGCAATACTCCAGGCAAGAGATGCTGAGAGCT...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 90 bp TGTCATATTCCTGGGCTGGACCGTTCAGCTCTCCGTCTACATACGTaGCCTGGAGAACTCCCCCATCTTCGTAAGTGTAAACTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: CHIPGLDRSALRLHT*PGELPHLRKCKLPG
Trigger: GCCAGGGAGTTTACACTTACGAAGATGGGGGAGTTCTCCAGGGCACGTATGTAGACGGAGAGCTGAACGGTCCAGCCCAGGAATATGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
ENST00000608795.5
CDS GCA 90 bp TTTCTATTCCAGGTCTCTGAACCCCAAAGCCAGGCCTTTCACTTTTaGTGGGTGGCCTGGAAGGCCTTCAGCTCCACCTGGTACCACTCA +
Preference number: 5 (lower is better)
Translates to: FLFQVSEPQSQAFHF*WVAWKAFSSTWYHS
Trigger: TGAGTGGTACCAGGTGGAGCTGAAGGCCTTCCAGGCCACCCAGCAAAAGTGAAAGGCCTGGCTTTGGGGTTCAGAGACCTGGAATAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS GCA 90 bp CCCGGCAACTCCCTGATGTTGGACCTCCAGACCAAGAGTGTTCACTaGATTGAGCTTTATCTGGGTCAGCGTGTGATTCTGGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PGNSLMLDLQTKSVH*IELYLGQRVILGAV
Trigger: CACTGCACCCAGAATCACACGCTGACCCAGATAAAGCTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CCACCCTGGGGTCTCAACCCCAACTCCACTGAGGGCAGCCTCCCTGACGTGTGTACCTACACACTGCTATaGATGCAAAAATCCATTTGG +
Preference number: 5 (lower is better)
Translates to: PPWGLNPNSTEGSLPDVCTYTLL*MQKSIW
Trigger: CCAAATGGATTTTTGCATCAATAGCAGTGTGTAGGT...ACACACGTCAGGGAGGCTGCCCTCAGTGGAGTTGGGGTTGAGACCCCAGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGCTCAGCGTGGATGCATaGCTTCCTCTGATTTGCGTG +
Preference number: 5 (lower is better)
Translates to: PEALAHPSQCIERSLSTELSVDA*LPLICV
Trigger: CACGCAAATCAGAGGAAGCAATGCATCCACGCTGAG...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCGGCAACTCCCTGATGTaGGACCTCCAGACCAAGAGT +
Preference number: 5 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECGNSLM*DLQTKS
Trigger: ACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTGCC...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCTTCCTGTGGTGTCAGTaGGCTTTGCTGGCCATAATG +
Preference number: 5 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCFLWCQ*ALLAIM
Trigger: CATTATGGCCAGCAAAGCCAACTGACACCACAGGAA...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp GGTCCTCTGAATCCTGGTGTGCCCCAGGGCTCAGTCCCTGATGTTTTTCTCCTCGGGGAAGCAATGAGGTaGAAAACTTCGTGTCATGGG +
Preference number: 5 (lower is better)
Translates to: GPLNPGVPQGSVPDVFLLGEAMR*KTSCHG
Trigger: CCCATGACACGAAGTTTTCAACCTCATTGCTTCCCC...GAGGAGAAAAACATCAGGGACTGAGCCCTGGGGCACACCAGGATTCAGAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp GGCTTTAGATGCTGTCCACATCTGGGAACCTTCGTATTTCCATCTCCAACCCATACACTCCTCCCCTGGTaGAGACCATGGGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: GFRCCPHLGTFVFPSPTHTLLPW*RPWVRG
Trigger: GCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGT...ATGGGTTGGAGATGGAAATACGAAGGTTCCCAGATGTGGACAGCATCTAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 90 bp TGTGTCTCCTCCTCCGTGTGTCTGAAACCAGTCCCGGCAACTCCCTaGTGTTGGACCTCCAGACCAAGAGTGTTCACTGCATTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: CVSSSVCLKPVPATP*CWTSRPRVFTALSF
Trigger: AAAGCTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTGCCGGGACTGGTTTCAGACACACGGAGGAGGAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTATGCGAGAAAGTCGTaGCTAACGCATGGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PEALAHPSQCIERSLSTEYARKS*LTHGER
Trigger: CCTCTCACCATGCGTTAGCAACGACTTTCTCGCATA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGAGAACCTCCACTCCCTaGACTTCTTTCCCTACCTAC +
Preference number: 5 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLRTSTP*TSFPTY
Trigger: GTAGGTAGGGAAAGAAGTCAAGGGAGTGGAGGTTCT...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCATTTTCCAGAAGCAGTaGCATCGTGAGGCCTGCATA +
Preference number: 5 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCIFQKQ*HREACI
Trigger: TATGCAGGCCTCACGATGCAACTGCTTCTGGAAAAT...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATTCCACGAGATGATTTaGATAAGCCTTGAGAATTCA +
Preference number: 5 (lower is better)
Translates to: AGHNELGPAAWACRGDLAFHEMI*ISLENS
Trigger: TGAATTCTCAAGGCTTATCAAAATCATCTCGTGGAA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CGTGTCATGGGGTGTCCCACGAGCTCTGTTTCCTGTGGTGTCAGTTGGCTTTGCCTTTGGCATGATCTTTaGAAGGAGATTTGCCCCCGT +
Preference number: 5 (lower is better)
Translates to: RVMGCPTSSVSCGVSWLCLWHDL*KEICPR
Trigger: ACGGGGGCAAATCTCCTTCAAAAGATCATGCCAAAG...GCAAAGCCAACTGACACCACAGGAAACAGAGCTCGTGGGACACCCCATGACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAACGTGCAGAGGGGACCTaGCAGGCTTCTAGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKRAEGT*QASRLE
Trigger: CTCTAACCTAGAAGCCTGCAAGGTCCCCTCTGCACG...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp GCTGGCCATAATGAACTCGGGCCCGCTGCTTGGGCGTGCAGAGGGGACCTTGCATTGAAAGCTGTACTTTaGAGTGACACCTATTATTCC +
Preference number: 5 (lower is better)
Translates to: AGHNELGPAAWACRGDLALKAVL*SDTYYS
Trigger: GGAATAATAGGTGTCACTCAAAAGTACAGCTTTCAA...TGCAAGGTCCCCTCTGCACGCCCAAGCAGCGGGCCCGAGTTCATTATGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAATCACACTCTGCTGTTTaGCCTCCTCTCTCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKSHSAV*PPLSPA
Trigger: AGCCGGGGAGAGAGGAGGCAAAACAGCAGAGTGTGA...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 90 bp CAACTCCCTGATGTTGGACCTCCAGACCAAGAGTGTTCACTGCATTaGGCTTTATCTGGGTCAGCGTGTGATTCTGGGTGCAGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: QLPDVGPPDQECSLH*ALSGSACDSGCSGE
Trigger: CTCTCCACTGCACCCAGAATCACACGCTGACCCAGATAAAGCTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 90 bp CATGCACGCAGTTGCATTTTCCAGAAGCAGTTGCATCGTGAGGCCTaGATAACTCTGCCTCTTGCGGCTGCATCATGTCAATCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: HARSCIFQKQLHREA*ITLPLAAASCQSLP
Trigger: AGGCAGAGATTGACATGATGCAGCCGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS CCA 90 bp TTATACTGCCCCTTGAAGATCAGTCTCCCATCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCTCCGTCTACATACGTGCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LYCPLKISLPSVSYS*AGPFSSPSTYVPWR
Trigger: TCTCCAGGGCACGTATGTAGACGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTTCAAGGGGCAGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
CDS-3UTR CAA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGCACAGAGCCTTACATTaGGGAGTATGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLHRALH*GVCVCV
Trigger: CACACACACACATACTCCCAAATGTAAGGCTCTGTG...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATACTCCGGTGTGCCGCCTaGGCCGCTGCCGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYILRCAA*AAAAAA
Trigger: TGCAGCAGCGGCAGCGGCCAAGGCGGCACACCGGAG...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS TCA 90 bp GATTCACCATGCACGCAGTTGCATTTTCCAGAAGCAGTTGCATCGTaGGGCCTGCATAACTCTGCCTCTTGCGGCTGCATCATGTCAATC +
Preference number: 5 (lower is better)
Translates to: DSPCTQLHFPEAVAS*GLHNSASCGCIMSI
Trigger: GATTGACATGATGCAGCCGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCATGGTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp AAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTGGACCGTTCAGCTCTCCGATGCCTCATAAACTCTaGGTGTCAGCTGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: KISLPSVSYSWAGPFSSPMPHKL*VSAVVT
Trigger: AGTCACCACAGCTGACACCAAGAGTTTATGAGGCAT...CGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CAA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCTCACCATGCACGCAGTaGCATTTTCCAGAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECSPCTQ*HFPEAV
Trigger: AACTGCTTCTGGAAAATGCAACTGCGTGCATGGTGA...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGACAACCAGAAGCATTTTaGTGTAAGCCAGAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRQPEAF*CKPEKG
Trigger: CCCTTTTTCTGGCTTACACAAAAATGCTTCTGGTTG...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 90 bp GCGCTTGATCCAGATGTGGGATCTTTGGGAGTGGAGCCCCAAATCTaGTTCTTTTACACGTTCCCAGGTGATTCTTCTGGCCAATATCGT +
Preference number: 5 (lower is better)
Translates to: ALDPDVGSLGVEPQI*FFYTFPGDSSGQYR
Trigger: ACGATATTGGCCAGAAGAATCACCTGGGAACGTGTAAAAGAAGCAGATTTGGGGCTCCACTCCCAAAGATCCCACATCTGGATCAAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS-3UTR CAA 90 bp AAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTGGACCGTTCAGCTCTCCGTCTTTATACTGCCCCTaGAAGATCAGTCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: KISLPSVSYSWAGPFSSPSLYCP*KISLPS
Trigger: AGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGA...CGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CAA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAACCTCCCTTCGCCCACTaGCCCCTCGCCTCGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKPPFAH*PLASEA
Trigger: AGCCTCCGAGGCGAGGGGCAAGTGGGCGAAGGGAGG...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp CACCTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCCCTCTAGAACAATGCTaGGCATGTAGTACGTACTCA +
Preference number: 5 (lower is better)
Translates to: HLSSTSCQSSAIRFSWECPLEQC*ACSTYS
Trigger: TGAGTACGTACTACATGCCAAGCATTGTTCTAGAGG...GCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp TCTCCTCTGTCCACACTCCTCCCCTGGTTGAGACCATGGGTCCGTGGCTTTAGAAGCTCAAGATTTAAGTaGTCTCTTCTGGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: SPLSTLLPWLRPWVRGFRSSRFK*SLLDVH
Trigger: ATGGACATCCAGAAGAGACAACTTAAATCTTGAGCT...TCTAAAGCCACGGACCCATGGTCTCAACCAGGGGAGGAGTGTGGACAGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp GAACTCGTACTCATCACCCAGCTGAAATCCTTATCCACATGTGGTCAGTCTGGTCCTGCTGTCAACCTCTaGGTGTGTAATTCGAACTCC +
Preference number: 5 (lower is better)
Translates to: ELVLITQLKSLSTCGQSGPAVNL*VCNSNS
Trigger: GGAGTTCGAATTACACACCAAGAGGTTGACAGCAGG...ACCAGACTGACCACATGTGGATAAGGATTTCAGCTGGGTGATGAGTACGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CAA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGTTTCAGTCTAATCATTaGGCATCTCCGAATGTGGTA +
Preference number: 5 (lower is better)
Translates to: PEALAHPSQCIERSLSTEFQSNH*ASPNVV
Trigger: TACCACATTCGGAGATGCCAAATGATTAGACTGAAA...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CCAGAGGCCCTGGCCCATCCGTCACAGTGTATAGAACGGTCTCTTTCTACAGAGGCATCAAGGTTTGATTaGTACCTAGTAATCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PEALAHPSQCIERSLSTEASRFD*YLVISV
Trigger: CACACTGATTACTAGGTACAAATCAAACCTTGATGC...CTCTGTAGAAAGAGACCGTTCTATACACTGTGACGGATGGGCCAGGGCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTCATTCAAATGTCCATTaGGGGACATGCTCCTACAGG +
Preference number: 5 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGHSNVH*GTCSYR
Trigger: CCTGTAGGAGCATGTCCCCAAATGGACATTTGAATG...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATTACATTTGGCCTCATaGGCCTTTCTGGGTGGGTCG +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSLHLAS*AFLGGS
Trigger: CGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAA...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCGCATGTGTGTTCGTATaGCTACTATACACAGTGAAA +
Preference number: 5 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSACVFV*LLYTVK
Trigger: TTTCACTGTGTATAGTAGCAATACGAACACACATGC...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTTGTGCCGGGAGCAACTaGAAAGTCCGTCGTGCACTG +
Preference number: 5 (lower is better)
Translates to: QQSKPIVSNSERACLINSCAGSN*KVRRAL
Trigger: CAGTGCACGACGGACTTTCAAGTTGCTCCCGGCACA...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTAGCCCTTTCAATTCCTaGGCCTTCAGCTGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: QQSKPIVSNSERACLINSSPFNS*AFSCCG
Trigger: GCCGCAGCAGCTGAAGGCCAAGGAATTGAAAGGGCT...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp TTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGCCAGATGTGGGATCTTaGGGAGTGGAGCCCCAAATC +
Preference number: 5 (lower is better)
Translates to: LKWLPECDFEFLREAYVLPDVGS*GVEPQI
Trigger: GATTTGGGGCTCCACTCCCAAAGATCCCACATCTGG...CAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CAA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAAGAGTGTTCACTGCATaGAGCTTTATCTGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKRVFTA*SFIWVS
Trigger: GCTGACCCAGATAAAGCTCAATGCAGTGAACACTCT...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp TCTTTTGAAGGAGATTTGCCCCCGTTTCAGTGGGTGCAAGTCAACTCATCATTCGCCACAATGGCCCCTTaGCTTTTCCTTAAACACCCC +
Preference number: 5 (lower is better)
Translates to: SFEGDLPPFQWVQVNSSFATMAP*LFLKHP
Trigger: GGGGTGTTTAAGGAAAAGCAAAGGGGCCATTGTGGC...GAATGATGAGTTGACTTGCACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CTGAGCTCCACCTCCTGTCAGAGCAGTGCCATTAGATTCTCATGGGAATGCAAAGCAAGCCAGTGGAATTaGGGGAGTTTTTCACTTGTC +
Preference number: 5 (lower is better)
Translates to: LSSTSCQSSAIRFSWECKASQWN*GSFSLV
Trigger: GACAAGTGAAAAACTCCCCAAATTCCACTGGCTTGC...TTTGCATTCCCATGAGAATCTAATGGCACTGCTCTGACAGGAGGTGGAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAACTATCTGCTACAGCTaGGAAGGCCTTCGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSTICYS*EGLRFP
Trigger: TGGAAAGCGAAGGCCTTCCAAGCTGTAGCAGATAGT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTGGCTGCACAACCCACTaGATCGAGGTTAATGCAAGC +
Preference number: 5 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAGCTTH*IEVNAS
Trigger: GCTTGCATTAACCTCGATCAAGTGGGTTGTGCAGCC...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GAGAGTTGGGAGGAAGACATGGTGAGGCTCAGCGTGGATGCATTGCTTCCTCTGTTACAACTGTCAGTCTaGCAACATAGTTTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ESWEEDMVRLSVDALLPLLQLSV*QHSFAC
Trigger: ACAAGCAAAACTATGTTGCAAGACTGACAGTTGTAA...CAGAGGAAGCAATGCATCCACGCTGAGCCTCACCATGTCTTCCTCCCAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTAGGAAGCAAGGATTTTaGTTATCGGAGGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGRKQGF*LSEDVS
Trigger: AGAGACGTCCTCCGATAACAAAAATCCTTGCTTCCT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GAAATGTACTGTGCTGAGAAATGGGCCCCTTGCCAGATGCTCCCCTCTCCTTCCAAAACCCCACTCAAGTaGAATATCATCATAAAGGAG +
Preference number: 5 (lower is better)
Translates to: EMYCAEKWAPCQMLPSPSKTPLK*NIIIKE
Trigger: CTCCTTTATGATGATATTCAACTTGAGTGGGGTTTT...GGAAGGAGAGGGGAGCATCTGGCAAGGGGCCCATTTCTCAGCACAGTACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATAGCTCCCGACCTCCCGTaGTGCCGGGAGCAACTTGAA +
Preference number: 5 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYIAPDLP*CREQLE
Trigger: TTCAAGTTGCTCCCGGCACAACGGGAGGTCGGGAGC...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTAGTAGAGACTGGGTTTaGCCATGTTGGCCATGGCTG +
Preference number: 5 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLSRDWV*PCWPWL
Trigger: CAGCCATGGCCAACATGGCAAAACCCAGTCTCTACT...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 90 bp GTCATCGTCCAGGTGCCCTTATTGGTGTCTTCCCAATCATTCTGGTaGGCTGATTTTGCAGAGGTGGGTGAAAATGAAGGCAGTAGTTAT +
Preference number: 5 (lower is better)
Translates to: VIVQVPLLVSSQSFW*ADFAEVGENEGSSY
Trigger: ATAACTACTGCCTTCATTTTCACCCACCTCTGCAAAATCAGCTCACCAGAATGATTGGGAAGACACCAATAAGGGCACCTGGACGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATCCCTGGTTGTCCCATaGTCAGATAAACGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSSLVVP*SDKRSA
Trigger: TGCACTACGTTTATCTGACAATGGGACAACCAGGGA...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAACAACGCCGAGGAAGTaGCTGAGAGTCAGAGTTATT +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSTTPRK*LRVRVI
Trigger: AATAACTCTGACTCTCAGCAACTTCCTCGGCGTTGT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GCAGTTAGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAAGTCAGCGTTTCTCTTTaGCTTAGGTGCGGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: AVSGIVESSNNSAVSSPKVSVSL*LRCGLA
Trigger: CGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGAC...TTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACTAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp AGTGGAATTGTAGAATCAAGTAACAACAGTGCAGTAAGCTCTCCCAAATTAAAACTGGGGCTCGCGAGTTaGGAGGAGGAGGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SGIVESSNNSAVSSPKLKLGLAS*EEEEEE
Trigger: CTCTTCCTCCTCCTCCTCCAAACTCGCGAGCCCCAG...TTTTAATTTGGGAGAGCTTACTGCACTGTTGTTACTTGATTCTACAATTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS-3UTR CAA 90 bp TCAGTCTGGTTTTATCTACACCCACACTTCACTTCCCTTATCTCCCATATTAGCTTCTACCCAGGGCGCTaGATCCAGATGTGGGATCTT +
Preference number: 5 (lower is better)
Translates to: SVWFYLHPHFTSLISHISFYPGR*IQMWDL
Trigger: AAGATCCCACATCTGGATCAAGCGCCCTGGGTAGAA...GCTAATATGGGAGATAAGGGAAGTGAAGTGTGGGTGTAGATAAAACCAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCATCTTTATACTGCCCCTaGAAGATCAGTCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSSLYCP*KISLPS
Trigger: AGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGA...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GCTTCTGATTCTGCTGCCCTGCAAAGAAATTGTGCTCCAGATAACTGCACCGGTAGACAGTCACTCCCTTaGGGCACATTTAAATTAAAG +
Preference number: 5 (lower is better)
Translates to: ASDSAALQRNCAPDNCTGRQSLP*GTFKLK
Trigger: CTTTAATTTAAATGTGCCCAAAGGGAGTGACTGTCT...ACCGGTGCAGTTATCTGGAGCACAATTTCTTTGCAGGGCAGCAGAATCAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CAGTATGTTACTTTCCAGCAGAGTGAACAGTCACACGGCTTACTGGGTAATATAGTCCAGGTGCCCTTATaGGTGTCTTCCCAATCATTC +
Preference number: 5 (lower is better)
Translates to: QYVTFQQSEQSHGLLGNIVQVPL*VSSQSF
Trigger: GAATGATTGGGAAGACACCAATAAGGGCACCTGGAC...TATATTACCCAGTAAGCCGTGTGACTGTTCACTCTGCTGGAAAGTAACATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CAA 90 bp CAGATCTTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATTCTTTATACTGCCCCTaGAAGATCAGTCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: QILKWLPECDFEFLREAYSLYCP*KISLPS
Trigger: AGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGA...ATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAAGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CAA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTATAAGGGTAGCCAGTTaGCCTTCTATCATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAIRVAS*PSIISP
Trigger: TGGAGAGATGATAGAAGGCAAACTGGCTACCCTTAT...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAGATCCCATCATTCCTTaGTGTCGGAAATTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSDPIIP*CRKFSL
Trigger: AAGACTGAATTTCCGACACAAAGGAATGATGGGATC...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp TGTCTTATGTCAAATGCTCGACAATACCTCTCAGTAGGACGTTGTTGCAAGGCTATTTTTCCTACTCTCTaGCATCATGCACCCAGACAC +
Preference number: 5 (lower is better)
Translates to: CLMSNARQYLSVGRCCKAIFPTL*HHAPRH
Trigger: GTGTCTGGGTGCATGATGCAAGAGAGTAGGAAAAAT...AGCCTTGCAACAACGTCCTACTGAGAGGTATTGTCGAGCATTTGACATAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp CAACAATCTAAGCCAATAGTGAGTAACAGTGAGAGGGCATGCCTCATAAACTCTTCTGGTGAGCTGATTTaGCAGAGGTGGGTGAAAATG +
Preference number: 5 (lower is better)
Translates to: QQSKPIVSNSERACLINSSGELI*QRWVKM
Trigger: CATTTTCACCCACCTCTGCAAAATCAGCTCACCAGA...AGAGTTTATGAGGCATGCCCTCTCACTGTTACTCACTATTGGCTTAGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS-3UTR CAA 90 bp TTAAAATGGCTCCCAGAGTGCGATTTTGAGTTCTTGAGGGAAGCCTATGTTCTGTGCGATTTTGAGTTCTaGAGGGAAGCCTATGTTCTG +
Preference number: 5 (lower is better)
Translates to: LKWLPECDFEFLREAYVLCDFEF*REAYVL
Trigger: CAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCA...CAGAACATAGGCTTCCCTCAAGAACTCAAAATCGCACTCTGGGAGCCATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506866.6
CDS-3UTR CAA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATTCTTTTGAAGGAGATTaGCCCCCGTTTCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: WVQVNSSFHEMILISLENSFEGD*PPFQWV
Trigger: CACCCACTGAAACGGGGGCAAATCTCCTTCAAAAGA...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATTGGTGTCAGTTGGCTTaGCTGGCCATAATGAACTCG +
Preference number: 5 (lower is better)
Translates to: WVQVNSSFHEMILISLENWCQLA*LAIMNS
Trigger: CGAGTTCATTATGGCCAGCAAAGCCAACTGACACCA...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp TGGGTGCAAGTCAACTCATCATTCCACGAGATGATTTTGATAAGCCTTGAGAATCTTCTGGATGTCCATTaGGTGGAAAACCCACCCAGT +
Preference number: 5 (lower is better)
Translates to: WVQVNSSFHEMILISLENLLDVH*VENPPS
Trigger: ACTGGGTGGGTTTTCCACCAAATGGACATCCAGAAG...ATTCTCAAGGCTTATCAAAATCATCTCGTGGAATGATGAGTTGACTTGCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 90 bp CAGTTTGCCTTCTATCATCTCTCCATCAATAAATTTCCCATAAAGTaGGGTCCTCTCATCAGGGTACACATAGGCTATCTTCTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QFAFYHLSINKFPIK*GPLIRVHIGYLLSS
Trigger: ACTGGAGAGAAGATAGCCTATGTGTACCCTGATGAGAGGACCGCACTTTATGGGAAATTTATTGATGGAGAGATGATAGAAGGCAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274031.8
ENST00000506866.6
CDS GCA 90 bp TTCTTAATTACTCACGAACATCATTATGAGCATCAGTCCTTGGGCTaGACTATAAAGAGGAATGCCAGCTTTTCTGTGTTCTACCCAGGG +
Preference number: 5 (lower is better)
Translates to: FLITHEHHYEHQSLG*TIKRNASFSVFYPG
Trigger: CCCTGGGTAGAACACAGAAAAGCTGGCATTCCTCTTTATAGTGCAGCCCAAGGACTGATGCTCATAATGATGTTCGTGAGTAATTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS-3UTR CAA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTCCTGCTGTCAACCTCTaGGTGTGTAATTCGAACTCC +
Preference number: 5 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRPAVNL*VCNSNS
Trigger: GGAGTTCGAATTACACACCAAGAGGTTGACAGCAGG...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp TATTCAGTTCCTTTGGTGGGCAATCTTCCTGGAAGCACTGACAACTTCCTCTCAAGATATGTTGATACATaGGCATGTGTGTTCGTATTG +
Preference number: 5 (lower is better)
Translates to: YSVPLVGNLPGSTDNFLSRYVDT*ACVFVL
Trigger: CAATACGAACACACATGCCAATGTATCAACATATCT...TGAGAGGAAGTTGTCAGTGCTTCCAGGAAGATTGCCCACCAAAGGAACTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS-3UTR CAA 90 bp GATGTGTTACAGCAGCCCCAGGAAACCGATACGGTCATCTTTAATGTTTCTCTTAGTCACTGTAGTGAGTaGAATCATGGCTCACAAAAA +
Preference number: 5 (lower is better)
Translates to: DVLQQPQETDTVIFNVSLSHCSE*NHGSQK
Trigger: TTTTTGTGAGCCATGATTCAACTCACTACAGTGACT...AAGAGAAACATTAAAGATGACCGTATCGGTTTCCTGGGGCTGCTGTAACACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS-3UTR CAA 90 bp CAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATAATGCCTCATAAACTCTaGGTGTCAGCTGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: QQCSKLSQIKNCWTGFYIMPHKL*VSAVVT
Trigger: AGTCACCACAGCTGACACCAAGAGTTTATGAGGCAT...TATGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CAA 90 bp AACAACAGTGCAGTAAGCTCTCCCAAATTAAAAATTGCTGGACTGGTTTTTACATCTTTATACTGCCCCTaGAAGATCAGTCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: NNSAVSSPKLKIAGLVFTSLYCP*KISLPS
Trigger: AGATGGGAGACTGATCTTCAAGGGGCAGTATAAAGA...TGTAAAAACCAGTCCAGCAATTTTTAATTTGGGAGAGCTTACTGCACTGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404104.7
ENST00000406354.1
CDS-3UTR CAA 90 bp TTAAATGTTAAAAATTGTTACATTTGGCCTCATTGGCCTTTCTGGGTGGGTCGTACCAAAGCCATTCTATaGCAAGATACAGATCAAAGG +
Preference number: 5 (lower is better)
Translates to: LNVKNCYIWPHWPFWVGRTKAIL*QDTDQR
Trigger: CCTTTGATCTGTATCTTGCAATAGAATGGCTTTGGT...ACGACCCACCCAGAAAGGCCAATGAGGCCAAATGTAACAATTTTTAACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS TCA 90 bp TCCATTATAAAAAGACATAACAGTATTAGGTCCCACAGCTACCTTTaGAAAAAGTCCTTCTCCAGCACTGGAAATAAGAGATTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SIIKRHNSIRSHSYL*KKSFSSTGNKRFSN
Trigger: GTTGCTGAATCTCTTATTTCCAGTGCTGGAGAAGGACTTTTTTCAAAGGTAGCTGTGGGACCTAATACTGTTATGTCTTTTTATAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000274031.8
ENST00000506866.6
ENST00000515101.1
CDS GCA 72 bp ATCCATGGCGGCTGGGGACACTGCCCAGCTCGGGGCTaGGCGGCTGCCTCCCGTCCCTCTGGGTGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: IHGGWGHCPARG*AAASRPSGCSR
Trigger: CCGGGAGCACCCAGAGGGACGGGAGGCAGCCGCGCAGCCCCGAGCTGGGCAGTGTCCCCAGCCGCCATGGAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
CDS GCA 72 bp TGGCGCGCCCCGAGCGCTCAACGCGGTCCTGGGCGCTaGGGGCTTCTCGCGGACACTTGGACCGCCCGTAGG +
Preference number: 6 (lower is better)
Translates to: WRAPSAQRGPGR*GLLADTWTARR
Trigger: CCTACGGGCGGTCCAAGTGTCCGCGAGAAGCCCGCAGCGCCCAGGACCGCGTTGAGCGCTCGGGGCGCGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 72 bp CGCGGTCCTGGGCGCTGCGGGCTTCTCGCGGACACTTaGACCGCCCGTAGGGGCTCCGAGCTCCCGACCTCC +
Preference number: 6 (lower is better)
Translates to: RGPGRCGLLADT*TARRGSELPTS
Trigger: GGAGGTCGGGAGCTCGGAGCCCCTACGGGCGGTCCAAGTGTCCGCGAGAAGCCCGCAGCGCCCAGGACCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CAA 90 bp ACCCGCCTCCGGCCCGTCAGCGTTTCTCTTTTGCTTAGGTGCGGCTaGGCGCGCCCCGAGCGCTCAACGCGGTCCTGGGCGCTGCGGGCT +
Preference number: 6 (lower is better)
Translates to: TRLRPVSVSLLLRCG*ARPERSTRSWALRA
Trigger: AGCCCGCAGCGCCCAGGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 72 bp CTCCTCCACCATCTCGTCGTCGCTATCCATGGCGGCTaGGGACACTGCCCAGCTCGGGGCTGCGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LLHHLVVAIHGG*GHCPARGCAAA
Trigger: GGCAGCCGCGCAGCCCCGAGCTGGGCAGTGTCCCCAGCCGCCATGGATAGCGACGACGAGATGGTGGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
CDS CAA 90 bp TCCGCGTCCCAGCCAACCCGCCTCCGGCCCGTCAGCGTTTCTCTTTaGCTTAGGTGCGGCTTGGCGCGCCCCGAGCGCTCAACGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SASQPTRLRPVSVSL*LRCGLARPERSTRS
Trigger: GGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGGTTGGCTGGGACGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS GCA 72 bp CGCCTCCGGCCCGTCAGCGTTTCTCTTTTGCTTAGGTaGGGCTTGGCGCGCCCCGAGCGCTCAACGCGGTCC +
Preference number: 6 (lower is better)
Translates to: RLRPVSVSLLLR*GLARPERSTRS
Trigger: GGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS GCA 72 bp TTCGCCCACTTGCCCCTCGCCTCGGAGGCTCCGGTGTaGCGCCTTGGCCGCTGCCGCTGCTGCAACTTTCTC +
Preference number: 6 (lower is better)
Translates to: FAHLPLASEAPV*RLGRCRCCNFL
Trigger: GAGAAAGTTGCAGCAGCGGCAGCGGCCAAGGCGGCACACCGGAGCCTCCGAGGCGAGGGGCAAGTGGGCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 72 bp GGCCCGTCAGCGTTTCTCTTTTGCTTAGGTGCGGCTTaGCGCGCCCCGAGCGCTCAACGCGGTCCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: GPSAFLFCLGAA*RAPSAQRGPGR
Trigger: GCGCCCAGGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CAA 72 bp CGGCCCGTCAGCGTTTCTCTTTTGCTTAGGTGCGGCTaGGCGCGCCCCGAGCGCTCAACGCGGTCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: RPVSVSLLLRCG*ARPERSTRSWA
Trigger: CGCCCAGGACCGCGTTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CAA 72 bp CAGCCAACCCGCCTCCGGCCCGTCAGCGTTTCTCTTTaGCTTAGGTGCGGCTTGGCGCGCCCCGAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: QPTRLRPVSVSL*LRCGLARPERS
Trigger: TGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGGTTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS GCA 72 bp AGCCAACCCGCCTCCGGCCCGTCAGCGTTTCTCTTTTaGTTAGGTGCGGCTTGGCGCGCCCCGAGCGCTCAA +
Preference number: 6 (lower is better)
Translates to: SQPASGPSAFLF*LGAAWRAPSAQ
Trigger: TTGAGCGCTCGGGGCGCGCCAAGCCGCACCTAAGCAAAAGAGAAACGCTGACGGGCCGGAGGCGGGTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CCA 72 bp TTTTGCTGGGTGGCCTGGAAGGCCTTCAGCTCCACCTaGTACCACTCAGGGGCTTCAGGCCCACTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: FCWVAWKAFSST*YHSGASGPLFP
Trigger: CGGGAAGAGTGGGCCTGAAGCCCCTGAGTGGTACCAGGTGGAGCTGAAGGCCTTCCAGGCCACCCAGCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS CCA 72 bp CCCCAAAGCCAGGCCTTTCACTTTTGCTGGGTGGCCTaGAAGGCCTTCAGCTCCACCTGGTACCACTCAGGG +
Preference number: 6 (lower is better)
Translates to: PQSQAFHFCWVA*KAFSSTWYHSG
Trigger: CCCTGAGTGGTACCAGGTGGAGCTGAAGGCCTTCCAGGCCACCCAGCAAAAGTGAAAGGCCTGGCTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS GCA 72 bp GCCATAGGCAACGGTGAGCTCTTCATCGGCCTCCACTaGTCTCAGGGTGCGGATGCATTTGATGGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: AIGNGELFIGLH*SQGADAFDGPK
Trigger: TTTGGGCCCATCAAATGCATCCGCACCCTGAGAGCAGTGGAGGCCGATGAAGAGCTCACCGTTGCCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS GCA 72 bp AACCCGTGCGGTAATCCGTCATCGTCCAGGTGCCCTTaGGGCTGCATCATGTCAATCTCTGCCTCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: NPCGNPSSSRCP*GCIMSISASVV
Trigger: GACCACAGAGGCAGAGATTGACATGATGCAGCCGCAAGGGCACCTGGACGATGACGGATTACCGCACGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608795.5
CDS GCA 72 bp GTGCAGAACCCGTGCGGTAATCCGTCATCGTCCAGGTaGCCTTGCGGCTGCATCATGTCAATCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: VQNPCGNPSSSR*PCGCIMSISAS
Trigger: AGAGGCAGAGATTGACATGATGCAGCCGCAAGGGCACCTGGACGATGACGGATTACCGCACGGGTTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608795.5
CDS TCA 72 bp CATCGGCCTCCACTGCTCTCAGGGTGCGGATGCATTTaGTGGGCCCAAAACGGGGGTGGACAAACATATCGT +
Preference number: 6 (lower is better)
Translates to: HRPPLLSGCGCI*WAQNGGGQTYR
Trigger: ACGATATGTTTGTCCACCCCCGTTTTGGGCCCATCAAATGCATCCGCACCCTGAGAGCAGTGGAGGCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS TCA 72 bp TTCTCCTGTAATACCCTCTCTTTGTTATCGAGCAGCTaGTCCGCTGACATCACCCAGCGCCGGTGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: FSCNTLSLLSSS*SADITQRRCAP
Trigger: GGGAGCGCACCGGCGCTGGGTGATGTCAGCGGATCAGCTGCTCGATAACAAAGAGAGGGTATTACAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404104.7
CDS CAA 72 bp TCATCGGCCTCCACTGCTCTCAGGGTGCGGATGCATTaGATGGGCCCAAAACGGGGGTGGACAAACATATCG +
Preference number: 6 (lower is better)
Translates to: SSASTALRVRMH*MGPKRGWTNIS
Trigger: CGATATGTTTGTCCACCCCCGTTTTGGGCCCATCAAATGCATCCGCACCCTGAGAGCAGTGGAGGCCGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274031.8
CDS TCA 72 bp TCCTCCGTGTGTCTGAAACCAGTCCCGGCAACTCCCTaGTGTTGGACCTCCAGACCAAGAGTGTTCACTGCA +
Preference number: 6 (lower is better)
Translates to: SSVCLKPVPATP*CWTSRPRVFTA
Trigger: TGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTGCCGGGACTGGTTTCAGACACACGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 72 bp CCTCCTTTTCTCTGTGTGTCTCCTCCTCCGTGTGTCTaGAACCAGTCCCGGCAACTCCCTGATGTTGGACCT +
Preference number: 6 (lower is better)
Translates to: PPFLCVSPPPCV*NQSRQLPDVGP
Trigger: AGGTCCAACATCAGGGAGTTGCCGGGACTGGTTTCAGACACACGGAGGAGGAGACACACAGAGAAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608795.5
ENST00000608958.1
CDS GCA 72 bp CCTGGGCTGGACCGTTCAGCTCTCCGTCTACATACGTaGCCTGGAGAACTCCCCCATCTTCGTAAGTGTAAA +
Preference number: 6 (lower is better)
Translates to: PGLDRSALRLHT*PGELPHLRKCK
Trigger: TTTACACTTACGAAGATGGGGGAGTTCTCCAGGGCACGTATGTAGACGGAGAGCTGAACGGTCCAGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
ENST00000608795.5
CDS GCA 72 bp GTCCAGGTGCCCTTGCGGCTGCATCATGTCAATCTCTaGCTCTGTGGTCACATCACTGCCTCCTTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: VQVPLRLHHVNL*LCGHITASFSL
Trigger: CAGAGAAAAGGAGGCAGTGATGTGACCACAGAGGCAGAGATTGACATGATGCAGCCGCAAGGGCACCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608795.5
CDS TCA 72 bp TGCACGCAGTTGCATTTTCCAGAAGCAGTTGCATCGTaGGGCCTGCATAACTCTGCCTCTTGCGGCTGCATC +
Preference number: 6 (lower is better)
Translates to: CTQLHFPEAVAS*GLHNSASCGCI
Trigger: GATGCAGCCGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS CCA 72 bp GAAGATCAGTCTCCCATCTGTGTCATATTCCTGGGCTaGACCGTTCAGCTCTCCGTCTACATACGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: EDQSPICVIFLG*TVQLSVYIRAL
Trigger: CAGGGCACGTATGTAGACGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
CDS CAA 72 bp CGTGTGTCTGAAACCAGTCCCGGCAACTCCCTGATGTaGGACCTCCAGACCAAGAGTGTTCACTGCATTGAG +
Preference number: 6 (lower is better)
Translates to: RVSETSPGNSLM*DLQTKSVHCIE
Trigger: CTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTGCCGGGACTGGTTTCAGACACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS CAA 90 bp CTCCTCCTCCGTGTGTCTGAAACCAGTCCCGGCAACTCCCTGATGTaGGACCTCCAGACCAAGAGTGTTCACTGCATTGAGCTTTATCTG +
Preference number: 6 (lower is better)
Translates to: LLLRVSETSPGNSLM*DLQTKSVHCIELYL
Trigger: CAGATAAAGCTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGAGTTGCCGGGACTGGTTTCAGACACACGGAGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 72 bp CAAAGTTCCCCTCAAATCTGTCTGTGGAGGAGTAGGTaGCTGTGCAGAACCCGTGCGGTAATCCGTCATCGT +
Preference number: 6 (lower is better)
Translates to: QSSPQICLWRSR*LCRTRAVIRHR
Trigger: ACGATGACGGATTACCGCACGGGTTCTGCACAGTCACCTACTCCTCCACAGACAGATTTGAGGGGAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
ENST00000608795.5
CDS TCA 72 bp TCCTCCGTGTGTCTGAAACCAGTCCCGGCAACTCCCTaGTGTTGGACCTCCAGACTTTCTGTAGAGAAACGT +
Preference number: 6 (lower is better)
Translates to: SSVCLKPVPATP*CWTSRLSVEKR
Trigger: ACGTTTCTCTACAGAAAGTCTGGAGGTCCAACATCAGGGAGTTGCCGGGACTGGTTTCAGACACACGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608795.5
CDS CCA 72 bp CCCTTGAAGATCAGTCTCCCATCTGTGTCATATTCCTaGGCTGGACCGTTCAGCTCTCCGTCTACATACGTG +
Preference number: 6 (lower is better)
Translates to: PLKISLPSVSYS*AGPFSSPSTYV
Trigger: CACGTATGTAGACGGAGAGCTGAACGGTCCAGCCCAGGAATATGACACAGATGGGAGACTGATCTTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274031.8
ENST00000404104.7
ENST00000406354.1
ENST00000506866.6
CDS CAA 72 bp GTTCTACCCAGGGCGCTTGATCCAGATGTGGGATCTTaGGGAGTGGAGCCCCAAATCTGCTTCTTTTACACG +
Preference number: 6 (lower is better)
Translates to: VLPRALDPDVGS*GVEPQICFFYT
Trigger: CGTGTAAAAGAAGCAGATTTGGGGCTCCACTCCCAAAGATCCCACATCTGGATCAAGCGCCCTGGGTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS CAA 90 bp CAGCTGAAGATTCACCATGCACGCAGTTGCATTTTCCAGAAGCAGTaGCATCGTGAGGCCTGCATAACTCTGCCTCTTGCGGCTGCATCA +
Preference number: 6 (lower is better)
Translates to: QLKIHHARSCIFQKQ*HREACITLPLAAAS
Trigger: TGATGCAGCCGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCATGGTGAATCTTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 72 bp GATGTTGGACCTCCAGACCAAGAGTGTTCACTGCATTaGGCTTTATCTGGGTCAGCGTGTGATTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: DVGPPDQECSLH*ALSGSACDSGC
Trigger: GCACCCAGAATCACACGCTGACCCAGATAAAGCTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 72 bp TTGTTCTGGCAGCTGAAGATTCACCATGCACGCAGTTaGATTTTCCAGAAGCAGTTGCATCGTGAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: LFWQLKIHHARS*IFQKQLHREAC
Trigger: GCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCATGGTGAATCTTCAGCTGCCAGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS CCA 72 bp TTCTACCCAGGGCGCTTGATCCAGATGTGGGATCTTTaGGAGTGGAGCCCCAAATCTGCTTCTTTTACACGT +
Preference number: 6 (lower is better)
Translates to: FYPGRLIQMWDL*EWSPKSASFTR
Trigger: ACGTGTAAAAGAAGCAGATTTGGGGCTCCACTCCCAAAGATCCCACATCTGGATCAAGCGCCCTGGGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS CCA 72 bp TTTTCTGTGTTCTACCCAGGGCGCTTGATCCAGATGTaGGATCTTTGGGAGTGGAGCCCCAAATCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: FSVFYPGRLIQM*DLWEWSPKSAS
Trigger: AGAAGCAGATTTGGGGCTCCACTCCCAAAGATCCCACATCTGGATCAAGCGCCCTGGGTAGAACACAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS CAA 72 bp ATTCACCATGCACGCAGTTGCATTTTCCAGAAGCAGTaGCATCGTGAGGCCTGCATAACTCTGCCTCTTGCG +
Preference number: 6 (lower is better)
Translates to: IHHARSCIFQKQ*HREACITLPLA
Trigger: CGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCATGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 72 bp TCCCTGATGTTGGACCTCCAGACCAAGAGTGTTCACTaGATTGAGCTTTATCTGGGTCAGCGTGTGATTCTG +
Preference number: 6 (lower is better)
Translates to: SLMLDLQTKSVH*IELYLGQRVIL
Trigger: CAGAATCACACGCTGACCCAGATAAAGCTCAATGCAGTGAACACTCTTGGTCTGGAGGTCCAACATCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS GCA 72 bp AGTTGCATTTTCCAGAAGCAGTTGCATCGTGAGGCCTaGATAACTCTGCCTCTTGCGGCTGCATCATGTCAA +
Preference number: 6 (lower is better)
Translates to: SCIFQKQLHREA*ITLPLAAASCQ
Trigger: TTGACATGATGCAGCCGCAAGAGGCAGAGTTATGCAGGCCTCACGATGCAACTGCTTCTGGAAAATGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS TCA 72 bp AAGTGGTACACTGAATTTCCAGGCATCAGTTCAAAGTaGGGCCTCCCTTCTTCAGTGGACATAAGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: KWYTEFPGISSK*GLPSSVDIRVA
Trigger: GGCTACCCTTATGTCCACTGAAGAAGGGAGGCCTCACTTTGAACTGATGCCTGGAAATTCAGTGTACCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274031.8
ENST00000506866.6
CDS TCA 72 bp ACTTGGATACGTGGTTATAGGGCTCAGGCACATCAATaGCCGTTTCTTCATCAAGGGAGAGGGTGTTCCCAT +
Preference number: 6 (lower is better)
Translates to: TWIRGYRAQAHQ*PFLHQGRGCSH
Trigger: ATGGGAACACCCTCTCCCTTGATGAAGAAACGGTCATTGATGTGCCTGAGCCCTATAACCACGTATCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274031.8
ENST00000506866.6
ENST00000515101.1
CDS GCA 72 bp GGAGAAGTGATTGTTCTGGCAGCTGAAGATTCACCATaGACGCAGTTGCATTTTCCAGAAGCAGTTGCATCG +
Preference number: 6 (lower is better)
Translates to: GEVIVLAAEDSP*TQLHFPEAVAS
Trigger: CGATGCAACTGCTTCTGGAAAATGCAACTGCGTGCATGGTGAATCTTCAGCTGCCAGAACAATCACTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608958.1
CDS CAA 90 bp AGGTGCCCTTATTGGTGTCTTCCCAATCATTCTGGTGAGCTGATTTaGCAGAGGTGGGTGAAAATGAAGGCAGTAGTTATTCTACTGGCT +
Preference number: 6 (lower is better)
Translates to: RCPYWCLPNHSGELI*QRWVKMKAVVILLA
Trigger: AGCCAGTAGAATAACTACTGCCTTCATTTTCACCCACCTCTGCAAAATCAGCTCACCAGAATGATTGGGAAGACACCAATAAGGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406354.1
CDS CAA 72 bp GGCCTCCCTTCTTCAGTGGACATAAGGGTAGCCAGTTaGCCTTCTATCATCTCTCCATCAATAAATTTCCCA +
Preference number: 6 (lower is better)
Translates to: GLPSSVDIRVAS*PSIISPSINFP
Trigger: TGGGAAATTTATTGATGGAGAGATGATAGAAGGCAAACTGGCTACCCTTATGTCCACTGAAGAAGGGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274031.8
ENST00000506866.6
CDS GCA 72 bp ACTCACGAACATCATTATGAGCATCAGTCCTTGGGCTaGACTATAAAGAGGAATGCCAGCTTTTCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: THEHHYEHQSLG*TIKRNASFSVF
Trigger: GAACACAGAAAAGCTGGCATTCCTCTTTATAGTGCAGCCCAAGGACTGATGCTCATAATGATGTTCGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS GCA 72 bp TTCTATCATCTCTCCATCAATAAATTTCCCATAAAGTaGGGTCCTCTCATCAGGGTACACATAGGCTATCTT +
Preference number: 6 (lower is better)
Translates to: FYHLSINKFPIK*GPLIRVHIGYL
Trigger: AAGATAGCCTATGTGTACCCTGATGAGAGGACCGCACTTTATGGGAAATTTATTGATGGAGAGATGATAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274031.8
ENST00000506866.6
CDS CAA 90 bp TATCTTTTCTTAATTACTCACGAACATCATTATGAGCATCAGTCCTaGGGCTGCACTATAAAGAGGAATGCCAGCTTTTCTGTGTTCTAC +
Preference number: 6 (lower is better)
Translates to: YLFLITHEHHYEHQS*GCTIKRNASFSVFY
Trigger: GTAGAACACAGAAAAGCTGGCATTCCTCTTTATAGTGCAGCCCAAGGACTGATGCTCATAATGATGTTCGTGAGTAATTAAGAAAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1
CDS TCA 72 bp AAAAGACATAACAGTATTAGGTCCCACAGCTACCTTTaGAAAAAGTCCTTCTCCAGCACTGGAAATAAGAGA +
Preference number: 6 (lower is better)
Translates to: KRHNSIRSHSYL*KKSFSSTGNKR
Trigger: TCTCTTATTTCCAGTGCTGGAGAAGGACTTTTTTCAAAGGTAGCTGTGGGACCTAATACTGTTATGTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274031.8
ENST00000506866.6
ENST00000515101.1
CDS TCA 72 bp CTTTTATCTTTTCTTAATTACTCACGAACATCATTATaGGCATCAGTCCTTGGGCTGCACTATAAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: LLSFLNYSRTSL*ASVLGLHYKEE
Trigger: TTCCTCTTTATAGTGCAGCCCAAGGACTGATGCTCATAATGATGTTCGTGAGTAATTAAGAAAAGATAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506866.6
ENST00000515101.1