RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000103037

Ensembl transcript IDs: ENST00000219315.9, ENST00000310682.6, ENST00000394266.8, ENST00000418480.1, ENST00000422445.5, ENST00000427443.5, ENST00000463954.1, ENST00000467320.1, ENST00000468223.1, ENST00000470003.5, ENST00000491587.1, ENST00000492050.5

Found 581 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCCCTATCACAAAGGCTCCCTCTTCCCCTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTT +
Preference number: 1 (lower is better)
Translates to: PSLSQRLPLPLPSPV*IGNPSARTLGAFQL
Trigger: AAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGAGGGAGCCTTTGTGATAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR CCA 90 bp CTGACTGAAGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTTaGTTTGTGGGTATCTGCCCCAACTACTGTTGGGATCAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: LTEESFQLFLTFPAL*FVGICPNYCWDQPP
Trigger: AGGAGGCTGATCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCTTCAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR GCA 90 bp AGCTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTGCACCATaGTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATCCAAGAAC +
Preference number: 1 (lower is better)
Translates to: SSGTQIATLTTSVAP*CTFLQRPIRKPSKN
Trigger: GTTCTTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTGGGTACCGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR GCA 90 bp GCAAATCAGCTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTaGACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATC +
Preference number: 1 (lower is better)
Translates to: ANQLRYPNSHTHYFS*TMLYLFAEANTEAI
Trigger: GATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTGGGTACCGGAGCTGATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CCA 90 bp ACTTCTTGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTaGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTGTCTG +
Preference number: 1 (lower is better)
Translates to: TSWLCASCVQGKYIN*YLVMKRQLMPCTCL
Trigger: CAGACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CCA 90 bp GTGCTAGAATTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTaGAATCCCATGAGTTTCCATTTTGTCTCTACCCAAACGTATTCC +
Preference number: 1 (lower is better)
Translates to: VLELDMSRNMGRAHY*NPMSFHFVSTQTYS
Trigger: GGAATACGTTTGGGTAGAGACAAAATGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAATTCTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR TCA 90 bp ATGAGACTGGAGACTGAAAACCATCTGTCTCTAGGTTGGGTCAGCTaGATGAGATGCAAGGTATTGTTAGGCCTACTCTTTAATCAGAGA +
Preference number: 1 (lower is better)
Translates to: MRLETENHLSLGWVS*MRCKVLLGLLFNQR
Trigger: TCTCTGATTAAAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGGTTTTCAGTCTCCAGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CCA 90 bp TCCAGAGTTCTCTTGGAACGGTTGATTGTAAATAGGCCACATCCTTaGGGTCTTCTTATTACCTTCATTGAGCTGATTAAAAACCCAGCG +
Preference number: 1 (lower is better)
Translates to: SRVLLERLIVNRPHP*GLLITFIELIKNPA
Trigger: CGCTGGGTTTTTAATCAGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACCGTTCCAAGAGAACTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR GCA 90 bp CTTCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTaGTATTTGGAGTATATTAATCCACCTGTCTTTACTAAAGGTGAA +
Preference number: 1 (lower is better)
Translates to: LLRLRAGFKPRYSNL*YLEYINPPVFTKGE
Trigger: TTCACCTTTAGTAAAGACAGGTGGATTAATATACTCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR TCA 90 bp TGTCTTAGGGTTTATTCCCTGAGAGGTGGTTTGTGCCATCTAGACTaGACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAA +
Preference number: 1 (lower is better)
Translates to: CLRVYSLRGGLCHLD*TLGNYRVPVTQLIK
Trigger: TTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAAACCACCTCTCAGGGAATAAACCCTAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
3UTR GCA 90 bp ATAAAACGCACAGAAATGAGAACTCTTTGGGGTCCCAAGAACCACTaGTTTAAACCAAAGATTAATTTGAAAGCCTCTGTCAGAAACCCA +
Preference number: 1 (lower is better)
Translates to: IKRTEMRTLWGPKNH*FKPKINLKASVRNP
Trigger: TGGGTTTCTGACAGAGGCTTTCAAATTAATCTTTGGTTTAAAGCAGTGGTTCTTGGGACCCCAAAGAGTTCTCATTTCTGTGCGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR GCA 90 bp AAATACATGAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTaGAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAAT +
Preference number: 1 (lower is better)
Translates to: KYMKEKTFVWNFLAL*KLCPRQVHKLVPCN
Trigger: ATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR TCA 90 bp GTTACACAGCTTATTAAATCCAGAGTCTTTTCAATAAAGGTTAAGTaGCTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTC +
Preference number: 1 (lower is better)
Translates to: VTQLIKSRVFSIKVK*LPQTRLRFKPGVYL
Trigger: GAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAGTCACTTAACCTTTATTGAAAAGACTCTGGATTTAATAAGCTGTGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGTGGACAATCCAGCCCTaGAGACCTTGGGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: THESTVPFSVAAASAGGEWTIQP*RPWGHG
Trigger: CCCATGGCCCCAAGGTCTGCAGGGCTGGATTGTCCA...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 90 bp TCCCTCCCTATCACAAAGGCTCCCTCTTCCCCTACCATCTCCAGTTaGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: SLPITKAPSSPTISS*HRKSQRSYTRCLSA
Trigger: AGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGAGGGAGCCTTTGTGATAGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR TCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 2 (lower is better)
Translates to: THESTVPFSVAAASAGGEHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGTTAGGGTTTATTCCCTaGGAGGTGGTTTGTGCCATC +
Preference number: 2 (lower is better)
Translates to: THESTVPFSVAAASAGGELGFIP*EVVCAI
Trigger: GATGGCACAAACCACCTCTCAGGGAATAAACCCTAA...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR GCA 90 bp CCATCTGTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTCAGTCGGTCGCACAGTaGTGCATGGGACAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: PSVSRLGQLNEMQGIVRPQSVAQ*CMGQKQ
Trigger: CTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTG...AGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGGAAGTCCTCCTTGAGTaGTGTCTTAGGGTTTATTCC +
Preference number: 2 (lower is better)
Translates to: THESTVPFSVAAASAGGEEVLLE*CLRVYS
Trigger: GGAATAAACCCTAAGACATCACTCAAGGAGGACTTC...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp GAGATTTGTAACTGTCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTGCTTACACCTCAGCCGCCTaGGATGGGGGTCAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: EICNCLHPSGYSSRSHSAYTSAA*DGGQLF
Trigger: AAAGAGCTGACCCCCATCTCAGGCGGCTGAGGTGTA...AGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGACAGTTACAAATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR GCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAACTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAGGTGAGGAGGAAAAGTaGACAATCCAGCCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQGEEEK*TIQPCR
Trigger: TCTGCAGGGCTGGATTGTCCACTTTTCCTCCTCACC...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTCCCCCATTACCCCACTaGATGAATGGCCATACAGGC +
Preference number: 2 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLPPLPH*MNGHTG
Trigger: GCCTGTATGGCCATTCATTCAGTGGGGTAATGGGGG...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR GCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCTGGTTTGTGGGTATCTaGCCCAACTACTGTTGGGAT +
Preference number: 2 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGWFVGI*PNYCWD
Trigger: ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCA...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CCA 90 bp AGCTGTCTCCACGATGCTTTGAGCTTGGGAATATTTGTGATCGTCAGGCTGCCCACAGTACCTTTAGTGTaGTGGTCAGCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: SCLHDALSLGIFVIVRLPTVPLV*WSAPLQ
Trigger: CTGAAGAGGAGCTGACCACCACACTAAAGGTACTGT...GGGCAGCCTGACGATCACAAATATTCCCAAGCTCAAAGCATCGTGGAGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR CAA 90 bp CATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTaGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: HKLVPCNEEAADAMH*SEGIAPCLLTFLVS
Trigger: GGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAGTCATGACACACACATaGGTCCACTGTGCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPVMTHT*VHCAFL
Trigger: GAGAAAGGCACAGTGGACTCATGTGTGTGTCATGAC...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAACCATACAGGCTAAGCTaGATAATGACAAAGTTGAAA +
Preference number: 2 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQPYRLS*IMTKLK
Trigger: TTTCAACTTTGTCATTATTCAGCTTAGCCTGTATGG...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCATACACCTCAGCCGCCTaGGATGGGGGTCAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPYTSAA*DGGQLF
Trigger: AAAGAGCTGACCCCCATCTCAGGCGGCTGAGGTGTA...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CCA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGACTCAGCCGCCTGAGATaGGGGTCAGCTCTTTATATA +
Preference number: 2 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGLSRLR*GSALYI
Trigger: TATATAAAGAGCTGACCCCCATCTCAGGCGGCTGAG...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CAA 90 bp CGGCCTGGGAGCTCATTCTGGAAATTACTACTTTTTGTACTAACTTaGTGTGCCATGTACTCTGGGCTTTATGTGGCTTCCTCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RPGSSFWKLLLFVLT*CAMYSGLYVASSPP
Trigger: TGGGGGAGAGGAAGCCACATAAAGCCCAGAGTACATGGCACACAAAGTTAGTACAAAAAGTAGTAATTTCCAGAATGAGCTCCCAGGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR TCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTTGTGCCATCTAGACTaGACTTTGGGTAACTATCGA +
Preference number: 2 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVLCHLD*TLGNYR
Trigger: TCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAA...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR GCA 90 bp AGCTGTCTCCACGATGCTTTGAGCTTGGGAATATTTGTGATCGTCAGGCTGCCCCTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: SCLHDALSLGIFVIVRLPLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...GGGCAGCCTGACGATCACAAATATTCCCAAGCTCAAAGCATCGTGGAGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGCTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 2 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 90 bp CAAATAGCCACACTCACTACTTCAGTTGCACCATGCTGTACCTTTTaGCAGAGGCCAATACGGAAGCCATCCAAGAACAGATCACAAGGT +
Preference number: 2 (lower is better)
Translates to: QIATLTTSVAPCCTF*QRPIRKPSKNRSQG
Trigger: ACCTTGTGATCTGTTCTTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR TCA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 2 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTTAGGGTTTATTCCCTaGGAGGTGGTTTGTGCCATC +
Preference number: 2 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHLGFIP*EVVCAI
Trigger: GATGGCACAAACCACCTCTCAGGGAATAAACCCTAA...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTCATTACCCCACTGAATaGATGGCCATACAGGCTAAG +
Preference number: 2 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLHYPTE*MAIQAK
Trigger: CTTAGCCTGTATGGCCATTCATTCAGTGGGGTAATG...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 2 (lower is better)
Translates to: GNRETANLSAPTTDVRSSHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR TCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATCCCCCAATCCTCTCCTaGAACTTAAAAACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADPPILS*NLKTVG
Trigger: TCCCACTGTTTTTAAGTTTCAGGAGAGGATTGGGGG...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAAACGTATTCCAAAGCTaGCTGCATTTGTACCATCTT +
Preference number: 2 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQNVFQS*LHLYHL
Trigger: AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTT...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR GCA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGACTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR GCA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCATCAACACTGGACAAATaGTGGAGCAGGTTTATCTGG +
Preference number: 2 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEASTLDK*WSRFIW
Trigger: CCAGATAAACCTGCTCCAGCATTTGTCCAGTGTTGA...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCTATGTCCACTGGCTTTaGTTAAAACTGAGAACAAAA +
Preference number: 2 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGYVHWL*LKLRTK
Trigger: TTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATA...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATACACTGGACAAATGCTaGAGCAGGTTTATCTGGTTA +
Preference number: 2 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADTLDKC*SRFIWL
Trigger: TAACCAGATAAACCTGCTCCAGCATTTGTCCAGTGT...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACCCATCTTATTTCTTTTaGGGATTATACACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHPSYFF*GLYTSA
Trigger: GGCTGAGGTGTATAATCCCCAAAAGAAATAAGATGG...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGTTAGGGTTTATTCCCTaGGAGGTGGTTTGTGCCATC +
Preference number: 2 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKLGFIP*EVVCAI
Trigger: GATGGCACAAACCACCTCTCAGGGAATAAACCCTAA...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
3UTR-3UTR TCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCATTGCCTTACCTTTCATaGCTGTCAAGTTTTATGGCC +
Preference number: 2 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPLPYLS*LSSFMA
Trigger: GGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAA...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATTTGTAGCCTTTTCCTaGGCTTCAGCTCCCCTACTT +
Preference number: 2 (lower is better)
Translates to: QWEYRKGNQISLINCSPPFVAFS*ASAPLL
Trigger: AAGTAGGGGAGCTGAAGCCCAGGAAAAGGCTACAAA...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGTACCTTTAGTGTGGTaGTCAGCTCCTCTTCAGTCA +
Preference number: 2 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKVPLVW*SAPLQS
Trigger: TGACTGAAGAGGAGCTGACCACCACACTAAAGGTAC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR CAA 90 bp CGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTaGGAGTATATTAATCCACCTGTCTTTACTAAAGGTGAAAACTTT +
Preference number: 2 (lower is better)
Translates to: RLRAGFKPRYSNLCY*EYINPPVFTKGENF
Trigger: AAAGTTTTCACCTTTAGTAAAGACAGGTGGATTAATATACTCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CAA 90 bp TGTGTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCCATAAGTGTTGAAAATCTCATGGCC +
Preference number: 2 (lower is better)
Translates to: CVVRIWFNKTVHMNQ*PVSHLPISVENLMA
Trigger: GGCCATGAGATTTTCAACACTTATGGGCAAATGGCTAACTGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427443.5
3UTR-3UTR TCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 2 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGAAGTCCTCCTTGAGTaGTGTCTTAGGGTTTATTCC +
Preference number: 2 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESEVLLE*CLRVYS
Trigger: GGAATAAACCCTAAGACATCACTCAAGGAGGACTTC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
3UTR-3UTR TCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCGAACTGTCACCATCTaGATGTCAGCTGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYRTVTI*MSAVSS
Trigger: AGATGACACAGCTGACATTCAGATGGTGACAGTTCG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
3UTR-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 2 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 2 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 2 (lower is better)
Translates to: TQQDLLITTVCPLALVKTLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCAGCTGTCTCCACGATaGTTTGAGCTTGGGAATATT +
Preference number: 2 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKQLSPR*FELGNI
Trigger: AATATTCCCAAGCTCAAAGCATCGTGGAGACAGCTG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGTTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 2 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 2 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTGTACCTTTAGTGTGGTaGTCAGCTCCTCTTCAGTCA +
Preference number: 2 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLVPLVW*SAPLQS
Trigger: TGACTGAAGAGGAGCTGACCACCACACTAAAGGTAC...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR CAA 90 bp TGTAAATACATGAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTaGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGT +
Preference number: 2 (lower is better)
Translates to: CKYMKEKTFVWNFLA*CKLCPRQVHKLVPC
Trigger: ACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATGTATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR TCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 2 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 2 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCATGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEACYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 2 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGATTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 2 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGACTGTCAAGTTTTATaGCCAGAGAGGACAAAACAG +
Preference number: 2 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESDCQVL*PERTKQ
Trigger: CTGTTTTGTCCTCTCTGGCCATAAAACTTGACAGTC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
3UTR-3UTR CCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCAGACTGTCAAGTTTTATaGCCAGAGAGGACAAAACAG +
Preference number: 2 (lower is better)
Translates to: QWEYRKGNQISLINCSPPDCQVL*PERTKQ
Trigger: CTGTTTTGTCCTCTCTGGCCATAAAACTTGACAGTC...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAACACTGGACAAATGCTaGAGCAGGTTTATCTGGTTA +
Preference number: 2 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLTLDKC*SRFIWL
Trigger: TAACCAGATAAACCTGCTCCAGCATTTGTCCAGTGT...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGTTTTGCAAATGTATTaGTCCCTGTGTTGTATTTTG +
Preference number: 2 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADVLQMY*SLCCIL
Trigger: CAAAATACAACACAGGGACCAATACATTTGCAAAAC...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 90 bp GAAGTCTATGTTAAGGAACTTGGACTTTTCCTCATTACCTCTGGGTaGAAAGCAGTAGCAATAACAGGATCATACTTGCATTTTCCTAAC +
Preference number: 2 (lower is better)
Translates to: EVYVKELGLFLITSG*KAVAITGSYLHFPN
Trigger: GTTAGGAAAATGCAAGTATGATCCTGTTATTGCTACTGCTTTCAACCCAGAGGTAATGAGGAAAAGTCCAAGTTCCTTAACATAGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR GCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTCTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAGACTGTCAAGTTTTATaGCCAGAGAGGACAAAACAG +
Preference number: 2 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKDCQVL*PERTKQ
Trigger: CTGTTTTGTCCTCTCTGGCCATAAAACTTGACAGTC...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
3UTR-3UTR CCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCATGCTTCATGTACAGTTaGTACGTGAAAGGATATAAA +
Preference number: 2 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPCFMYS*YVKGYK
Trigger: TTTATATCCTTTCACGTACCAACTGTACATGAAGCA...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR TCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAGACTTCCTTATTACTaGGTAAACCTTGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKRLPYY*VNLGQF
Trigger: AAACTGACCAAGGTTTACTCAGTAATAAGGAAGTCT...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR GCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAAACCCACTTAAAATTTaGCTTACCTTTCATGACTGT +
Preference number: 2 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRNPLKI*LTFHDC
Trigger: ACAGTCATGAAAGGTAAGGCAAATTTTAAGTGGGTT...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
3UTR-3UTR CCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGATGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR GCA 72 bp TCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTaGTGCATGGGACAGAAGCAGGCCCAGCAAGTAATG +
Preference number: 3 (lower is better)
Translates to: SSSFRLFQSVAQ*CMGQKQAQQVM
Trigger: CATTACTTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR GCA 72 bp ACAGAAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTaGCAGTTAGACGAAACTGCATCTCTGTTGTACGTG +
Preference number: 3 (lower is better)
Translates to: TEAGPASNGRDR*QLDETASLLYV
Trigger: CACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATTACTTGCTGGGCCTGCTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR GCA 72 bp CTCCGGTACCCAAATAGCCACACTCACTACTTCAGTTaGACCATGCTGTACCTTTTTGCAGAGGCCAATACG +
Preference number: 3 (lower is better)
Translates to: LRYPNSHTHYFS*TMLYLFAEANT
Trigger: CGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTGGGTACCGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CAA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAGGGAAGGGCTCACTATaGGAATCCCATGAGTTTCCA +
Preference number: 3 (lower is better)
Translates to: NGRDRCQLDETASLLYVSGKGSL*ESHEFP
Trigger: TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCC...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR GCA 72 bp ACCCAAATAGCCACACTCACTACTTCAGTTGCACCATaGTGTACCTTTTTGCAGAGGCCAATACGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: TQIATLTTSVAP*CTFLQRPIRKP
Trigger: TGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTGTGGCTATTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CAA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGACCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CAA 90 bp CCATCTGTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTCCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: PSVSRLGQLNEMQGIVRPPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...AGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp GAGATTTGTAACTGTCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTGCTTGGAACTTCTTGGCTTaGTGCAAGCTGTGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: EICNCLHPSGYSSRSHSAWNFLA*CKLCPR
Trigger: CCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCA...AGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGACAGTTACAAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp CCATCTGTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTCAGCTCCCCTACTTCTaGTATGTGTATGCATACTGT +
Preference number: 3 (lower is better)
Translates to: PSVSRLGQLNEMQGIVRPQLPYF*YVYAYC
Trigger: ACAGTATGCATACACATACAAGAAGTAGGGGAGCTG...AGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGACCATCTTATTTCTTTaGGGGATTATACACCTCAGC +
Preference number: 3 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVTILFL*GIIHLS
Trigger: GCTGAGGTGTATAATCCCCAAAAGAAATAAGATGGT...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGGGAAGGGCTCACTATaGGAATCCCATGAGTTTCCA +
Preference number: 3 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADGKGSL*ESHEFP
Trigger: TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCC...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR GCA 72 bp CACTCACTACTTCAGTTGCACCATGCTGTACCTTTTTaGAGAGGCCAATACGGAAGCCATCCAAGAACAGAT +
Preference number: 3 (lower is better)
Translates to: HSLLQLHHAVPF*RGQYGSHPRTD
Trigger: ATCTGTTCTTGGATGGCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CCA 72 bp CTTTGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTaGTACCTTGTAATGAAGAGGCAGCTGATGCCATGC +
Preference number: 3 (lower is better)
Translates to: LCASCVQGKYIN*YLVMKRQLMPC
Trigger: GCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: GNRETANLSAPTTDVRSSPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTGTGGATGTGCTAGAATaGGATATGTCCAGGAACATG +
Preference number: 3 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLVDVLE*DMSRNM
Trigger: CATGTTCCTGGACATATCCAATTCTAGCACATCCAC...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTTTTGTCTGGAACTTCTaGGCTTTGTGCAAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLFVWNF*ALCKLC
Trigger: ACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAA...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 3 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAACCATCTTATTTCTTTaGGGGATTATACACCTCAGC +
Preference number: 3 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPTILFL*GIIHLS
Trigger: GCTGAGGTGTATAATCCCCAAAAGAAATAAGATGGT...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGTGGATGTGCTAGAATaGGATATGTCCAGGAACATG +
Preference number: 3 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADVDVLE*DMSRNM
Trigger: CATGTTCCTGGACATATCCAATTCTAGCACATCCAC...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR TCA 72 bp GTTTATTCCCTGAGAGGTGGTTTGTGCCATCTAGACTaGACTTTGGGTAACTATCGAGTACCAGTTACACAG +
Preference number: 3 (lower is better)
Translates to: VYSLRGGLCHLD*TLGNYRVPVTQ
Trigger: CTGTGTAACTGGTACTCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAAACCACCTCTCAGGGAATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR TCA 72 bp GAGACTGAAAACCATCTGTCTCTAGGTTGGGTCAGCTaGATGAGATGCAAGGTATTGTTAGGCCTACTCTTT +
Preference number: 3 (lower is better)
Translates to: ETENHLSLGWVS*MRCKVLLGLLF
Trigger: AAAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGGTTTTCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR GCA 72 bp TTCTCTGAGGTGGTGGTGATAACCAGTCCTAAATCATaGAGGCCTATGAAGTCTATGTTAAGGAACTTGGAC +
Preference number: 3 (lower is better)
Translates to: FSEVVVITSPKS*RPMKSMLRNLD
Trigger: GTCCAAGTTCCTTAACATAGACTTCATAGGCCTGCATGATTTAGGACTGGTTATCACCACCACCTCAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CCA 72 bp TTGGATATGTCCAGGAACATGGGAAGGGCTCACTATTaGAATCCCATGAGTTTCCATTTTGTCTCTACCCAA +
Preference number: 3 (lower is better)
Translates to: LDMSRNMGRAHY*NPMSFHFVSTQ
Trigger: TTGGGTAGAGACAAAATGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCCTACCATCTCCAGTTaGCATAGGAAATCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: TQQDLLITTVCPLALVKTPTISS*HRKSQR
Trigger: GCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAACCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACCTACCATCTCCAGTTaGCATAGGAAATCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQPTISS*HRKSQR
Trigger: GCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR TCA 72 bp CACATCCTTGGGGTCTTCTTATTACCTTCATTGAGCTaGTTAAAAACCCAGCGTTTAAGTTCTGGAACCATG +
Preference number: 3 (lower is better)
Translates to: HILGVFLLPSLS*LKTQRLSSGTM
Trigger: CATGGTTCCAGAACTTAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR GCA 72 bp AAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTTGTaGAAGCTGTGTCCAAGGCAAGTACATAAACTGGTA +
Preference number: 3 (lower is better)
Translates to: KEKTFVWNFLAL*KLCPRQVHKLV
Trigger: TACCAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 3 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR-3UTR CAA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCACGATGCTTTGAGCTaGGGAATATTTGTGATCGTC +
Preference number: 3 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESHDALS*GIFVIV
Trigger: GACGATCACAAATATTCCCAAGCTCAAAGCATCGTG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCACGATGCTTTGAGCTaGGGAATATTTGTGATCGTC +
Preference number: 3 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKHDALS*GIFVIV
Trigger: GACGATCACAAATATTCCCAAGCTCAAAGCATCGTG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATGTCTCCACGATGCTTaGAGCTTGGGAATATTTGTG +
Preference number: 3 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLCLHDA*SLGIFV
Trigger: CACAAATATTCCCAAGCTCAAAGCATCGTGGAGACA...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR GCA 72 bp ATTCTGGAAATTACTACTTTTTGTACTAACTTTGTGTaGCATGTACTCTGGGCTTTATGTGGCTTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: ILEITTFCTNFV*HVLWALCGFLS
Trigger: GGAGAGGAAGCCACATAAAGCCCAGAGTACATGGCACACAAAGTTAGTACAAAAAGTAGTAATTTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR GCA 72 bp ACAGAAATGAGAACTCTTTGGGGTCCCAAGAACCACTaGTTTAAACCAAAGATTAATTTGAAAGCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: TEMRTLWGPKNH*FKPKINLKASV
Trigger: GACAGAGGCTTTCAAATTAATCTTTGGTTTAAAGCAGTGGTTCTTGGGACCCCAAAGAGTTCTCATTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CCA 72 bp CTCTTGGAACGGTTGATTGTAAATAGGCCACATCCTTaGGGTCTTCTTATTACCTTCATTGAGCTGATTAAA +
Preference number: 3 (lower is better)
Translates to: LLERLIVNRPHP*GLLITFIELIK
Trigger: TTTAATCAGCTCAATGAAGGTAATAAGAAGACCCCAAGGATGTGGCCTATTTACAATCAACCGTTCCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CAA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 3 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
3UTR-3UTR CAA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 3 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 3 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGATTTCAGCTTCAGTTTTaGTTCCCTGTAATGCTGCCT +
Preference number: 3 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRFQLQF*FPVMLP
Trigger: AGGCAGCATTACAGGGAACAAAAACTGAAGCTGAAA...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTTTCAGCTTCAGTTTTaGTTCCCTGTAATGCTGCCT +
Preference number: 3 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLFQLQF*FPVMLP
Trigger: AGGCAGCATTACAGGGAACAAAAACTGAAGCTGAAA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTTGCCAGTTAGCCATTaGCCCATAAGTGTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESLPVSH*PISVEN
Trigger: ATTTTCAACACTTATGGGCAAATGGCTAACTGGCAA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
3UTR-3UTR CAA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCC +
Preference number: 3 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHVHMNQ*PVSHLP
Trigger: GGGCAAATGGCTAACTGGCAACTGATTCATATGTAC...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427443.5
3UTR GCA 72 bp ATGTGGGATACAATTGTGAGCAAAATGGATGGTTCCTaGCCTCTTAATACTCATTCTGATGGACATTTATCA +
Preference number: 3 (lower is better)
Translates to: MWDTIVSKMDGS*PLNTHSDGHLS
Trigger: TGATAAATGTCCATCAGAATGAGTATTAAGAGGGCAGGAACCATCCATTTTGCTCACAATTGTATCCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR-3UTR CAA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 3 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 3 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR-3UTR CAA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 3 (lower is better)
Translates to: TQQDLLITTVCPLALVKTRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
3UTR TCA 72 bp TGTAATCTTTGTTATGCTTCATGTACAGTTGGTACGTaGAAGGATATAAAGTTAAGCCAATGCTTACTGGCA +
Preference number: 3 (lower is better)
Translates to: CNLCYASCTVGT*KDIKLSQCLLA
Trigger: TGCCAGTAAGCATTGGCTTAACTTTATATCCTTTCACGTACCAACTGTACATGAAGCATAACAAAGATTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAATCGCACAGTGCTGCATaGGACAGAAGCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQSHSAA*DRSRPS
Trigger: GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGA...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGATCTCCCGGGCCACCATaGCGTAGCCGGCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGSPGPP*RSRPPC
Trigger: GCACGGTGGCCGGCTACGGCATGGTGGCCCGGGAGA...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAATGGAGCAGGTGTGCTaGGACAGGAGCGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQMEQVC*DRSAAR
Trigger: GCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCAT...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGCAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVQPDWL*SATRSR
Trigger: GCGAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTG...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGGCAGCACGATGGACTaGTACTCGCTGCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQGSTMD*YSLRML
Trigger: CAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCC...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCCGGCCACCGTGCCCTaGCGGCTGACCGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSPATVP*RLTATL
Trigger: CAAGGTGGCGGTCAGCCGGCAGGGCACGGTGGCCGG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCCTCGCTCGCTCACCTTaGGACTCAGCTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGLARSP*DSAPAP
Trigger: TGGGGCTGGAGCTGAGTCCCAAGGTGAGCGAGCGAG...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp GGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTTCAGTTTTTGTTCCCTCCGGCGCTCCTCCTCTaGCCAGAACATCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GNPSARTLGAFQLQFLFPPALLL*PEHRVL
Trigger: GAGCACCCGATGTTCTGGCCAGAGGAGGAGCGCCGG...AGGGAACAAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CTACCATCTCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCCGGCGCTCCTCCTCTaGCCAGAACATCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPSPVCIGNPSARTLGAFPALLL*PEHRVL
Trigger: GAGCACCCGATGTTCTGGCCAGAGGAGGAGCGCCGG...AAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCCGTGCCCTGCCGGCTaGCCGCCACCTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCPCPAG*PPPWDS
Trigger: TGAGTCCCAAGGTGGCGGTCAGCCGGCAGGGCACGG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR GCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACCCGATGGAGCAGGTGTaGTGCGACAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHPMEQV*CDRSAA
Trigger: GGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGG...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TTTTTGTTCCCTGTAATGCTGCCTCACGAACTGTCACCATCTGAATGTCAGCTGCCTCAGGTACGCCTGTaGCCTGGAGCAGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: FLFPVMLPHELSPSECQLPQVRL*PGAGTG
Trigger: GCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGG...CAGCTGACATTCAGATGGTGACAGTTCGTGAGGCAGCATTACAGGGAACAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACGGCACCCAGCCCGACTaGCTCTGCAGCGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHGTQPD*LCSATR
Trigger: GCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCC...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGACGGGGTGGGCTTCCATaGAGGGCAGCACGATGGACT +
Preference number: 4 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGRGGLP*RAARWT
Trigger: AGTCCATCGTGCTGCCCTTCATGGAAGCCCACCCCG...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCCGCTTTGTCGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGRFVAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCGACAAAGCG...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp GAGATTTGTAACTGTCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTGCTCCAGCAGGCCGCCGATaGAGCAGGTGTGCTGCGACA +
Preference number: 4 (lower is better)
Translates to: EICNCLHPSGYSSRSHSAPAGRR*SRCAAT
Trigger: TGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGG...AGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGACAGTTACAAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTGGCACCCAGCCCGACTaGCTCTGCAGCGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCGTQPD*LCSATR
Trigger: GCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCC...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAACTCAGCCGCCTGAGATaGGGGTCAGCTCTTTATATA +
Preference number: 4 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQLSRLR*GSALYI
Trigger: TATATAAAGAGCTGACCCCCATCTCAGGCGGCTGAG...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAACAGCCCTTTGGTTTGTaGGTATCTGCCCCAACTACT +
Preference number: 4 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQQPFGL*VSAPTT
Trigger: AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTG...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGACTTTCCCAGCCCTTTaGTTTGTGGGTATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: THESTVPFSVAAASAGGETFPAL*FVGICP
Trigger: GGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGT...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCQPDWL*SATRSR
Trigger: GCGAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCACGTGAGGCCGGGGCCTaGAGCTCGTGGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QWEYRKGNQISLINCSPPREAGA*SSWSSA
Trigger: GGCGCTGCTCCACGAGCTGCAGGCCCCGGCCTCACG...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCGTGAGGCCGGGGCCTaGAGCTCGTGGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESREAGA*SSWSSA
Trigger: GGCGCTGCTCCACGAGCTGCAGGCCCCGGCCTCACG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAACAGTCGGTCGCACAGTaGTGCATGGGACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQQSVAQ*CMGQKQ
Trigger: CTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTG...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGAGGCGTGAGTCACTGTaGCCAGCCTGCAGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVRRESL*PACSVR
Trigger: TCTAACACTGCAGGCTGGGCACAGTGACTCACGCCT...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAATCGCCTGGGTCGCCATaGTCTAAGAGCGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQSPGSP*SKSAFP
Trigger: AGGAAACGCGCTCTTAGACCATGGCGACCCAGGCGA...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCCAGCAGGCCGCCGATaGAGCAGGTGTGCTGCGACA +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCPAGRR*SRCAAT
Trigger: TGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCCAGCAGGCCGCCGATaGAGCAGGTGTGCTGCGACA +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSPAGRR*SRCAAT
Trigger: TGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CTACCATCTCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTGGCAGCACGATGGACTaGTACTCGCTGCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LPSPVCIGNPSARTLGAFGSTMD*YSLRML
Trigger: CAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCC...AAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AGCTGTCTCCACGATGCTTTGAGCTTGGGAATATTTGTGATCGTCAGGCTGCCCGTGAAAGGGAGAAGCTaGGGCCATGCCGCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: SCLHDALSLGIFVIVRLPVKGRS*GHAAEY
Trigger: ATACTCTGCGGCATGGCCCCAGCTTCTCCCTTTCAC...GGGCAGCCTGACGATCACAAATATTCCCAAGCTCAAAGCATCGTGGAGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427443.5
3UTR CAA 72 bp ATCACAAAGGCTCCCTCTTCCCCTACCATCTCCAGTTaGCATAGGAAATCCCAGCGCTCGTACACTAGGTGC +
Preference number: 4 (lower is better)
Translates to: ITKAPSSPTISS*HRKSQRSYTRC
Trigger: GCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGGGGAAGAGGGAGCCTTTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACCGGCTGACCGCCACCTaGGCAGGAGGGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNRLTAT*AGGLVR
Trigger: CCTGACCAGCCCTCCTGCTCAGGTGGCGGTCAGCCG...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGTAGGGCCTCCAGCGTaGGGCCGGGGCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTVGPPA*GRGLQL
Trigger: GAGCTGCAGGCCCCGGCCTCACGCTGGAGGCCCTAC...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGTAGGGCCTCCAGCGTaGGGCCGGGGCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRVGPPA*GRGLQL
Trigger: GAGCTGCAGGCCCCGGCCTCACGCTGGAGGCCCTAC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTGCCATGCACTTGTCTaGGGGCATAGCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVCHALV*GHSSMS
Trigger: AGACATGGAGCTATGCCCTCAGACAAGTGCATGGCA...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACCGTGCCCTGCCGGCTaGCCGCCACCTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRPCPAG*PPPWDS
Trigger: TGAGTCCCAAGGTGGCGGTCAGCCGGCAGGGCACGG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp ATCTGTGTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCACCGTGCCCTGCCGGCTaGCCGCCACCTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ICVVRIWFNKTVHMNQLPPCPAG*PPPWDS
Trigger: TGAGTCCCAAGGTGGCGGTCAGCCGGCAGGGCACGG...TGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR GCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAATCTCCCGGGCCACCATaGCGTAGCCGGCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKSPGPP*RSRPPC
Trigger: GCACGGTGGCCGGCTACGGCATGGTGGCCCGGGAGA...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCAGTTAGCCCGATGGAGCAGGTGTaGTGCGACAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VVRIWFNKTVHMNQLPVSPMEQV*CDRSAA
Trigger: GGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGG...GCTAACTGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCGTGAGGCCGGGGCCTaGAGCTCGTGGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTREAGA*SSWSSA
Trigger: GGCGCTGCTCCACGAGCTGCAGGCCCCGGCCTCACG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAACCAGTTAGACGAAACTaGATCTCTGTTGTACGTGTC +
Preference number: 4 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQPVRRN*ISVVRV
Trigger: GACACGTACAACAGAGATGCAGTTTCGTCTAACTGG...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCACAGTCGGTCGCACAGTaGTGCATGGGACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSQSVAQ*CMGQKQ
Trigger: CTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTG...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCCGGCCACCGTGCCCTaGCGGCTGACCGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYPATVP*RLTATL
Trigger: CAAGGTGGCGGTCAGCCGGCAGGGCACGGTGGCCGG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR GCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTAGGCAGAACATCGGGTaGTCCAAGCGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCRQNIG*SKRPSS
Trigger: CGAGCTGGGCCGCTTGGAGCACCCGATGTTCTGCCT...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394266.8
CDS-3UTR CCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCATCGCCTGGGTCGCCATaGTCTAAGAGCGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSSPGSP*SKSAFP
Trigger: AGGAAACGCGCTCTTAGACCATGGCGACCCAGGCGA...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGGTACGCCTGTGCCCTaGAGCAGGCACCGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKGTPVP*SRHRRS
Trigger: GGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAGGTACGCCTGTGCCCTaGAGCAGGCACCGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLGTPVP*SRHRRS
Trigger: GGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACC...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GAGATTTGTAACTGTCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTGCTTCGCACAGTGCTGCATaGGACAGAAGCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: EICNCLHPSGYSSRSHSASHSAA*DRSRPS
Trigger: GCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGA...AGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGACAGTTACAAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCGGCTGACCGCCACCTaGGCAGGAGGGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTRLTAT*AGGLVR
Trigger: CCTGACCAGCCCTCCTGCTCAGGTGGCGGTCAGCCG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000422445.5
CDS-3UTR TCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGTAGGGCCTCCAGCGTaGGGCCGGGGCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQVGPPA*GRGLQL
Trigger: GAGCTGCAGGCCCCGGCCTCACGCTGGAGGCCCTAC...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTCTCCCGGGCCACCATaGCGTAGCCGGCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLSPGPP*RSRPPC
Trigger: GCACGGTGGCCGGCTACGGCATGGTGGCCCGGGAGA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTCTCCCGGGCCACCATaGCGTAGCCGGCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYSPGPP*RSRPPC
Trigger: GCACGGTGGCCGGCTACGGCATGGTGGCCCGGGAGA...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAATGGAGCAGGTGTGCTaGGACAGGAGCGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRMEQVC*DRSAAR
Trigger: GCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCAT...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCCGATGGAGCAGGTGTaGTGCGACAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKPMEQV*CDRSAA
Trigger: GGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACCTCAGGTACGCCTGTaGCCTGGAGCAGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRPQVRL*PGAGTG
Trigger: GCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CTACCATCTCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCGAACCTGTAAGGCTTaGTGTTCCCTCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPSPVCIGNPSARTLGAFRTCKA*CSLQLS
Trigger: ACTCAGCTGGAGGGAACAGCAAGCCTTACAGGTTCG...AAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGAACTTCTTGGCTTTGTaGAAGCTGTGTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: THESTVPFSVAAASAGGENFLAL*KLCPRQ
Trigger: TTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTT...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCCGGCCACCGTGCCCTaGCGGCTGACCGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHPATVP*RLTATL
Trigger: CAAGGTGGCGGTCAGCCGGCAGGGCACGGTGGCCGG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCAGGCACCCAGCCCGACTaGCTCTGCAGCGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: QWEYRKGNQISLINCSPPGTQPD*LCSATR
Trigger: GCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCC...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCACCACTGTGCCCGGCCTaGGAGCTCATTCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPPLCPA*ELILEI
Trigger: AATTTCCAGAATGAGCTCCCAGGCCGGGCACAGTGG...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp CCATCTGTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTCCTTTAGGAATGGGCTaGGTGGCTACCATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: PSVSRLGQLNEMQGIVRPPLGMG*VATIRR
Trigger: TCTTCGGATGGTAGCCACTCAGCCCATTCCTAAAGG...AGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAGCTGTTCCCTCCAGCTaGGTTTCGCATAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPAVPSS*VSHRLP
Trigger: AGGAAGTCTATGCGAAACTCAGCTGGAGGGAACAGC...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGTTGTGCCATCTAGACTaGACTTTGGGTAACTATCGA +
Preference number: 4 (lower is better)
Translates to: THESTVPFSVAAASAGGELCHLD*TLGNYR
Trigger: TCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAA...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGATGCCATGCACTTGTCTaGGGGCATAGCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGCHALV*GHSSMS
Trigger: AGACATGGAGCTATGCCCTCAGACAAGTGCATGGCA...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp CTACCATCTCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCGAACTGTCACCATCTaGATGTCAGCTGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: LPSPVCIGNPSARTLGAFRTVTI*MSAVSS
Trigger: CGATGACACAGCTGACATTCAGATGGTGACAGTTCG...AAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422445.5
CDS-3UTR GCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAATCTCCCGGGCCACCATaGCGTAGCCGGCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQSPGPP*RSRPPC
Trigger: GCACGGTGGCCGGCTACGGCATGGTGGCCCGGGAGA...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAATGGAGCAGGTGTGCTaGGACAGGAGCGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKMEQVC*DRSAAR
Trigger: GCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCAT...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTATGGAGCAGGTGTGCTaGGACAGGAGCGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLMEQVC*DRSAAR
Trigger: GCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCAT...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCCGATGGAGCAGGTGTaGTGCGACAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTPMEQV*CDRSAA
Trigger: GGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCCGATGGAGCAGGTGTaGTGCGACAGGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYPMEQV*CDRSAA
Trigger: GGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCACAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: QWEYRKGNQISLINCSPPQPDWL*SATRSR
Trigger: GCGAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTG...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRQPDWL*SATRSR
Trigger: GCGAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAACAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKQPDWL*SATRSR
Trigger: GCGAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTG...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAGGCCAGAACATCGGGTaGTCCAAGCGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLGQNIG*SKRPSS
Trigger: CGAGCTGGGCCGCTTGGAGCACCCGATGTTCTGGCC...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACCTCAGGTACGCCTGTaGCCTGGAGCAGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKPQVRL*PGAGTG
Trigger: GCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGCTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTGGTTTGTGGGTATCTaGCCCAACTACTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVWFVGI*PNYCWD
Trigger: ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCA...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTCGCCTGGGTCGCCATaGTCTAAGAGCGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCSPGSP*SKSAFP
Trigger: AGGAAACGCGCTCTTAGACCATGGCGACCCAGGCGA...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATGGCACCCAGCCCGACTaGCTCTGCAGCGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYGTQPD*LCSATR
Trigger: GCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCC...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGGCACCCAGCCCGACTaGCTCTGCAGCGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRGTQPD*LCSATR
Trigger: GCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCTGAAGAGATCGGGGTaGGCTTCCATGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSLKRSG*ASMKGS
Trigger: GCTGCCCTTCATGGAAGCCCACCCCGATCTCTTCAG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGGACTGTCAAGTTTTATaGCCAGAGAGGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: THESTVPFSVAAASAGGEDCQVL*PERTKQ
Trigger: CTGTTTTGTCCTCTCTGGCCATAAAACTTGACAGTC...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGACACTGGACAAATGCTaGAGCAGGTTTATCTGGTTA +
Preference number: 4 (lower is better)
Translates to: THESTVPFSVAAASAGGETLDKC*SRFIWL
Trigger: TAACCAGATAAACCTGCTCCAGCATTTGTCCAGTGT...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 72 bp AGAATCCTTTCAGCTCTTCCTGACTTTCCCAGCCCTTaGGTTTGTGGGTATCTGCCCCAACTACTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RILSALPDFPSP*VCGYLPQLLLG
Trigger: TCCCAACAGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTCAGGAAGAGCTGAAAGGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAACGGGGTGGGCTTCCATaGAGGGCAGCACGATGGACT +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKRGGLP*RAARWT
Trigger: AGTCCATCGTGCTGCCCTTCATGGAAGCCCACCCCG...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GAGATTTGTAACTGTCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTGCTCCTTTAGGAATGGGCTaGGTGGCTACCATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: EICNCLHPSGYSSRSHSAPLGMG*VATIRR
Trigger: TCTTCGGATGGTAGCCACTCAGCCCATTCCTAAAGG...AGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGACAGTTACAAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CCATCTGTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSVSRLGQLNEMQGIVRPAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...AGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAACATTACCCCACTGAATaGATGGCCATACAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQHYPTE*MAIQAK
Trigger: CTTAGCCTGTATGGCCATTCATTCAGTGGGGTAATG...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAACTAGGTTGGGTCAGCTaGATGAGATGCAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQLGWVS*MRCKVL
Trigger: CAATACCTTGCATCTCATTCAGCTGACCCAACCTAG...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAGGCCAGAACATCGGGTaGTCCAAGCGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKGQNIG*SKRPSS
Trigger: CGAGCTGGGCCGCTTGGAGCACCCGATGTTCTGGCC...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp AGCTGTCTCCACGATGCTTTGAGCTTGGGAATATTTGTGATCGTCAGGCTGCCCCGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SCLHDALSLGIFVIVRLPRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...GGGCAGCCTGACGATCACAAATATTCCCAAGCTCAAAGCATCGTGGAGACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCCAGCAGGCCGCCGATaGAGCAGGTGTGCTGCGACA +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYPAGRR*SRCAAT
Trigger: TGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACCGGCGCTCCTCCTCTaGCCAGAACATCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKPALLL*PEHRVL
Trigger: GAGCACCCGATGTTCTGGCCAGAGGAGGAGCGCCGG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGACCGGCGCTCCTCCTCTaGCCAGAACATCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRPALLL*PEHRVL
Trigger: GAGCACCCGATGTTCTGGCCAGAGGAGGAGCGCCGG...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTACTCGCTGCGGATGTTaGCCAAATCCTTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSTRCGC*PNPSPR
Trigger: CCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGT...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCACTCAGCCGCCTGAGATaGGGGTCAGCTCTTTATATA +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPLSRLR*GSALYI
Trigger: TATATAAAGAGCTGACCCCCATCTCAGGCGGCTGAG...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCATGCCCCAACTACTGTTaGGATCAGCCTCCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPCPNYC*DQPPVL
Trigger: TAAGACAGGAGGCTGATCCCAACAGTAGTTGGGGCA...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACACTTTCCCAGCCCTTTaGTTTGTGGGTATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHTFPAL*FVGICP
Trigger: GGGGCAGATACCCACAAACCAAAGGGCTGGGAAAGT...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 72 bp GTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTaGTCTGAGGGCATAGCTCCATGTCTTCTGACATTC +
Preference number: 4 (lower is better)
Translates to: VPCNEEAADAMH*SEGIAPCLLTF
Trigger: GAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGCTGCCTCTTCATTACAAGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCGGGGTGGGCTTCCATaGAGGGCAGCACGATGGACT +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTRGGLP*RAARWT
Trigger: AGTCCATCGTGCTGCCCTTCATGGAAGCCCACCCCG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGACAAAACCGTACATATaGATCAGTTGCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVTKPYI*ISCQLA
Trigger: GGCTAACTGGCAACTGATTCATATGTACGGTTTTGT...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCACGAACTGTCACCATCTaGATGTCAGCTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSRTVTI*MSAVSS
Trigger: AGATGACACAGCTGACATTCAGATGGTGACAGTTCG...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CCATCTGTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 4 (lower is better)
Translates to: PSVSRLGQLNEMQGIVRPHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...AGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGACAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCACATTACCCCACTGAATaGATGGCCATACAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSHYPTE*MAIQAK
Trigger: CTTAGCCTGTATGGCCATTCATTCAGTGGGGTAATG...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCGCATTAGAGAGATTGTaGTACACACACACACACACT +
Preference number: 4 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGALERL*YTHTHT
Trigger: AGTGTGTGTGTGTGTGTATCACAATCTCTCTAATGC...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCGCTTTCAGTGTTCAGTaGAAATCCGTTTGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGAFSVQ*KSVWLV
Trigger: AACCAACCAAACGGATTTTCACTGAACACTGAAAGC...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATGGCCAGAACATCGGGTaGTCCAAGCGGCCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHGQNIG*SKRPSS
Trigger: CGAGCTGGGCCGCTTGGAGCACCCGATGTTCTGGCC...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCACTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATGGACAATCCAGCCCTaGAGACCTTGGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: QWEYRKGNQISLINCSPPWTIQP*RPWGHG
Trigger: CCCATGGCCCCAAGGTCTGCAGGGCTGGATTGTCCA...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACCAGCAGGCCGCCGATaGAGCAGGTGTGCTGCGACA +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQPAGRR*SRCAAT
Trigger: TGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTCAGCCCTTTGGTTTGTaGGTATCTGCCCCAACTACT +
Preference number: 4 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLQPFGL*VSAPTT
Trigger: AGTAGTTGGGGCAGATACCCACAAACCAAAGGGCTG...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAAGTAGAACACTGTTTTaGAGCAGCTGTCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPSRTLF*SSCLHD
Trigger: ATCGTGGAGACAGCTGCTTCAAAACAGTGTTCTACT...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CTACCATCTCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTTTGTGCCATCTAGACTaGACTTTGGGTAACTATCGA +
Preference number: 4 (lower is better)
Translates to: LPSPVCIGNPSARTLGAFLCHLD*TLGNYR
Trigger: TCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAA...AAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAATGGACAATCCAGCCCTaGAGACCTTGGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKWTIQP*RPWGHG
Trigger: CCCATGGCCCCAAGGTCTGCAGGGCTGGATTGTCCA...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACTGGTTTGTGGGTATCTaGCCCAACTACTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHWFVGI*PNYCWD
Trigger: ATCCCAACAGTAGTTGGGGCAGATACCCACAAACCA...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAACTTCAGTTGCACCATaGTGTACCTTTTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSTSVAP*CTFLQR
Trigger: CCTCTGCAAAAAGGTACAGCATGGTGCAACTGAAGT...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCACTCACTACTTCAGTTaGACCATGCTGTACCTTTTT +
Preference number: 4 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGTHYFS*TMLYLF
Trigger: AAAAAGGTACAGCATGGTGCAACTGAAGTAGTGAGT...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTCGCCTGGGTCGCCATaGTCTAAGAGCGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESSPGSP*SKSAFP
Trigger: AGGAAACGCGCTCTTAGACCATGGCGACCCAGGCGA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGGCAGCACGATGGACTaGTACTCGCTGCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESGSTMD*YSLRML
Trigger: CAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAACTGAAGAGATCGGGGTaGGCTTCCATGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKLKRSG*ASMKGS
Trigger: GCTGCCCTTCATGGAAGCCCACCCCGATCTCTTCAG...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCACCATCACGGGGGAGTTaGGCTCCTTTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPPSRGS*APFHPL
Trigger: AAGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGG...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACGTACCTTTAGTGTGGTaGTCAGCTCCTCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHVPLVW*SAPLQS
Trigger: TGACTGAAGAGGAGCTGACCACCACACTAAAGGTAC...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAGGTGAGGAGGAAAAGTaGACAATCCAGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPGEEEK*TIQPCR
Trigger: TCTGCAGGGCTGGATTGTCCACTTTTCCTCCTCACC...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAATATGTCCAGGAACATaGGAAGGGCTCACTATTGGA +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSICPGT*EGLTIG
Trigger: TCCAATAGTGAGCCCTTCCCATGTTCCTGGACATAT...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCACACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 4 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEAHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCCCCCATTACCCCACTaGATGAATGGCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESPPLPH*MNGHTG
Trigger: GCCTGTATGGCCATTCATTCAGTGGGGTAATGGGGG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCCCCCAATCCTCTCCTaGAACTTAAAAACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCPPILS*NLKTVG
Trigger: TCCCACTGTTTTTAAGTTTCAGGAGAGGATTGGGGG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCATGCTGTACCTTTTTaGAGAGGCCAATACGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCHAVPF*RGQYGS
Trigger: GCTTCCGTATTGGCCTCTGCAAAAAGGTACAGCATG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTACTCGCTGCGGATGTTaGCCAAATCCTTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESTRCGC*PNPSPR
Trigger: CCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGT...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTGGCAGCACGATGGACTaGTACTCGCTGCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLGSTMD*YSLRML
Trigger: CAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCC...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGACTGAAGAGATCGGGGTaGGCTTCCATGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRLKRSG*ASMKGS
Trigger: GCTGCCCTTCATGGAAGCCCACCCCGATCTCTTCAG...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCTGAAGAGATCGGGGTaGGCTTCCATGAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYLKRSG*ASMKGS
Trigger: GCTGCCCTTCATGGAAGCCCACCCCGATCTCTTCAG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCACTCTTCTTCCTCCAGTaGTTCCTGAAAGCTATAGGC +
Preference number: 4 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEALFFLQ*FLKAIG
Trigger: GCCTATAGCTTTCAGGAACCACTGGAGGAAGAAGAG...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTTCAGTTTTTGTTCCCTGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: GNPSARTLGAFQLQFLFPDWRCD*LSGLVC
Trigger: ACATACTAAACCACTTAGCCAATCACAACGCCAATC...AGGGAACAAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAACAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQQSILD*RCDWLS
Trigger: ACTTAGCCAATCACAACGCCAATCTAGAATACTCTG...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTGTACCTTTAGTGTGGTaGTCAGCTCCTCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCVPLVW*SAPLQS
Trigger: TGACTGAAGAGGAGCTGACCACCACACTAAAGGTAC...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAACAGTACCTTTAGTGTaGTGGTCAGCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEATVPLV*WSAPLQ
Trigger: CTGAAGAGGAGCTGACCACCACACTAAAGGTACTGT...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTTTTGTTCCCTGTAATGCTGCCTCACGAACTGTCACCATCTGAATGTCAGCTGTTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: FLFPVMLPHELSPSECQLLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...CAGCTGACATTCAGATGGTGACAGTTCGTGAGGCAGCATTACAGGGAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CCA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAACACTGGACAAATGCTaGAGCAGGTTTATCTGGTTA +
Preference number: 4 (lower is better)
Translates to: NGRDRCQLDETASLLYVSTLDKC*SRFIWL
Trigger: TAACCAGATAAACCTGCTCCAGCATTTGTCCAGTGT...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTTGTAGCCTTTTCCTaGGCTTCAGCTCCCCTACTT +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCFVAFS*ASAPLL
Trigger: AAGTAGGGGAGCTGAAGCCCAGGAAAAGGCTACAAA...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTGGAAGGGCTCACTATTaGAATCCCATGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLGRAHY*NPMSFH
Trigger: ATGGAAACTCATGGGATTCCAATAGTGAGCCCTTCC...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAATCAGCGTCCGACTGCTaGGATTACAGGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKSASDC*DYRHVA
Trigger: GGCCACATGCCTGTAATCCCAGCAGTCGGACGCTGA...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp TTTTTGTTCCCTGTAATGCTGCCTCACGAACTGTCACCATCTGAATGTCAGCTGTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: FLFPVMLPHELSPSECQLSRLAL*LAKWFS
Trigger: ACTAAACCACTTAGCCAATCACAACGCCAATCTAGA...CAGCTGACATTCAGATGGTGACAGTTCGTGAGGCAGCATTACAGGGAACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCCTTTAGGAATGGGCTaGGTGGCTACCATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESPLGMG*VATIRR
Trigger: TCTTCGGATGGTAGCCACTCAGCCCATTCCTAAAGG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTAGTAGAACACTGTTTTaGAGCAGCTGTCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCSRTLF*SSCLHD
Trigger: ATCGTGGAGACAGCTGCTTCAAAACAGTGTTCTACT...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGCTGTTCCCTCCAGCTaGGTTTCGCATAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESAVPSS*VSHRLP
Trigger: AGGAAGTCTATGCGAAACTCAGCTGGAGGGAACAGC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTCCCCCATTACCCCACTaGATGAATGGCCATACAGGC +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLPPLPH*MNGHTG
Trigger: GCCTGTATGGCCATTCATTCAGTGGGGTAATGGGGG...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATTACACCTCAGCCGCCTaGGATGGGGGTCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHYTSAA*DGGQLF
Trigger: AAAGAGCTGACCCCCATCTCAGGCGGCTGAGGTGTA...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATAATGAGACTGGAGACTaGAAACCATCTGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADNETGD*KPSVSR
Trigger: CCTAGAGACAGATGGTTTTCAGTCTCCAGTCTCATT...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATGGACTGGTACTCGCTaGGGATGTTGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLWTGTR*GCWPNP
Trigger: AGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCA...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTCAGCTGTCTCCACGATaGTTTGAGCTTGGGAATATT +
Preference number: 4 (lower is better)
Translates to: GNRETANLSAPTTDVRSSQLSPR*FELGNI
Trigger: AATATTCCCAAGCTCAAAGCATCGTGGAGACAGCTG...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCGAACCTGTAAGGCTTaGTGTTCCCTCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESRTCKA*CSLQLS
Trigger: ACTCAGCTGGAGGGAACAGCAAGCCTTACAGGTTCG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACGAACCTGTAAGGCTTaGTGTTCCCTCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLRTCKA*CSLQLS
Trigger: ACTCAGCTGGAGGGAACAGCAAGCCTTACAGGTTCG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAACTCTGTCACTCAGTCTaGAGTACAGTGGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKLCHSV*STVAPS
Trigger: AGATGGCGCCACTGTACTGCAGACTGAGTGACAGAG...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTACTCGCTGCGGATGTTaGCCAAATCCTTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLTRCGC*PNPSPR
Trigger: CCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGT...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACCATCACGGGGGAGTTaGGCTCCTTTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRPSRGS*APFHPL
Trigger: AAGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TCTACGGCTAAGAGCAGGGTTCAAACCCAGGTATTCCAACCTGTGCTATTTGGAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: STAKSRVQTQVFQPVLFGDWRCD*LSGLVC
Trigger: ACATACTAAACCACTTAGCCAATCACAACGCCAATC...TCCAAATAGCACAGGTTGGAATACCTGGGTTTGAACCCTGCTCTTAGCCGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTTACTGAGTAAACCTTaGTCAGTTTTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVLLSKP*SVFKSV
Trigger: CACAGACTTAAAAACTGACCAAGGTTTACTCAGTAA...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACCTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCATTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEALFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCAGGTGAGGAGGAAAAGTaGACAATCCAGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QWEYRKGNQISLINCSPPGEEEK*TIQPCR
Trigger: TCTGCAGGGCTGGATTGTCCACTTTTCCTCCTCACC...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAGGCAAGTACATAAACTaGTACCTTGTAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPGKYIN*YLVMKR
Trigger: CCTCTTCATTACAAGGTACCAGTTTATGTACTTGCC...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTGCAGTAAGTCTCCTTaGACTTGTAATCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVCSKSP*TCNLCY
Trigger: ATAACAAAGATTACAAGTCCAAGGAGACTTACTGCA...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAAGCCTCTCAAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRSLSSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTTGAGAGGCT...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCSRLAL*LAKWFS
Trigger: ACTAAACCACTTAGCCAATCACAACGCCAATCTAGA...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACCTTTAGGAATGGGCTaGGTGGCTACCATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKPLGMG*VATIRR
Trigger: TCTTCGGATGGTAGCCACTCAGCCCATTCCTAAAGG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAGCTGTTCCCTCCAGCTaGGTTTCGCATAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKAVPSS*VSHRLP
Trigger: AGGAAGTCTATGCGAAACTCAGCTGGAGGGAACAGC...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGCTGTTCCCTCCAGCTaGGTTTCGCATAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRAVPSS*VSHRLP
Trigger: AGGAAGTCTATGCGAAACTCAGCTGGAGGGAACAGC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATTTGTGCCATCTAGACTaGACTTTGGGTAACTATCGA +
Preference number: 4 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADLCHLD*TLGNYR
Trigger: TCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAA...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAGTCATGACACACACATaGGTCCACTGTGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLVMTHT*VHCAFL
Trigger: GAGAAAGGCACAGTGGACTCATGTGTGTGTCATGAC...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATCCACAAGGCACATTTTaGTTAAAGGTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADPQGTF*LKVRSF
Trigger: GAAACTCCTGACCTTTAATCAAAATGTGCCTTGTGG...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGATGGACTGGTACTCGCTaGGGATGTTGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRWTGTR*GCWPNP
Trigger: AGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCA...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTGGACTGGTACTCGCTaGGGATGTTGGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLWTGTR*GCWPNP
Trigger: AGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCGAACCTGTAAGGCTTaGTGTTCCCTCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTRTCKA*CSLQLS
Trigger: ACTCAGCTGGAGGGAACAGCAAGCCTTACAGGTTCG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAGGTCCCAAGAACCACTaGTTTAAACCAAAGATTAAT +
Preference number: 4 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPGPKNH*FKPKIN
Trigger: ATTAATCTTTGGTTTAAAGCAGTGGTTCTTGGGACC...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATACTCGCTGCGGATGTTaGCCAAATCCTTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHTRCGC*PNPSPR
Trigger: CCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGT...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCCATCACGGGGGAGTTaGGCTCCTTTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTPSRGS*APFHPL
Trigger: AAGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHQSILD*RCDWLS
Trigger: ACTTAGCCAATCACAACGCCAATCTAGAATACTCTG...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTGACTGTCAAGTTTTATaGCCAGAGAGGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCDCQVL*PERTKQ
Trigger: CTGTTTTGTCCTCTCTGGCCATAAAACTTGACAGTC...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTGCCCCAACTACTGTTaGGATCAGCCTCCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESCPNYC*DQPPVL
Trigger: TAAGACAGGAGGCTGATCCCAACAGTAGTTGGGGCA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCATCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPSRLAL*LAKWFS
Trigger: ACTAAACCACTTAGCCAATCACAACGCCAATCTAGA...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACGAACTGTCACCATCTaGATGTCAGCTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLRTVTI*MSAVSS
Trigger: AGATGACACAGCTGACATTCAGATGGTGACAGTTCG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAACGAACTGTCACCATCTaGATGTCAGCTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKRTVTI*MSAVSS
Trigger: AGATGACACAGCTGACATTCAGATGGTGACAGTTCG...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp ATCTGTGTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCACGAACTGTCACCATCTaGATGTCAGCTGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: ICVVRIWFNKTVHMNQLPRTVTI*MSAVSS
Trigger: AGATGACACAGCTGACATTCAGATGGTGACAGTTCG...TGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR TCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp ATCTGTGTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCACACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 4 (lower is better)
Translates to: ICVVRIWFNKTVHMNQLPHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...TGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR TCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACTTAGGGTTTATTCCCTaGGAGGTGGTTTGTGCCATC +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNLGFIP*EVVCAI
Trigger: GATGGCACAAACCACCTCTCAGGGAATAAACCCTAA...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTTAGGGTTTATTCCCTaGGAGGTGGTTTGTGCCATC +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESLGFIP*EVVCAI
Trigger: GATGGCACAAACCACCTCTCAGGGAATAAACCCTAA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTATCCGAAGACAATTCTaGGGTGAAAGGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESIRRQF*GEREKL
Trigger: CAGCTTCTCCCTTTCACCTCAGAATTGTCTTCGGAT...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCGAACCTGTAAGGCTTaGTGTTCCCTCCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHRTCKA*CSLQLS
Trigger: ACTCAGCTGGAGGGAACAGCAAGCCTTACAGGTTCG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAATGGAAGGGACAGGTaGCAGTTAGACGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKNGRDR*QLDETA
Trigger: TGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACCTCTTCTTCCTCCAGTaGTTCCTGAAAGCTATAGGC +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNLFFLQ*FLKAIG
Trigger: GCCTATAGCTTTCAGGAACCACTGGAGGAAGAAGAG...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACTCTTCTTCCTCCAGTaGTTCCTGAAAGCTATAGGC +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLLFFLQ*FLKAIG
Trigger: GCCTATAGCTTTCAGGAACCACTGGAGGAAGAAGAG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCCATCACGGGGGAGTTaGGCTCCTTTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHPSRGS*APFHPL
Trigger: AAGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACCATCACGGGGGAGTTaGGCTCCTTTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQPSRGS*APFHPL
Trigger: AAGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGTACCTTTAGTGTGGTaGTCAGCTCCTCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESVPLVW*SAPLQS
Trigger: TGACTGAAGAGGAGCTGACCACCACACTAAAGGTAC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAACAGTACCTTTAGTGTaGTGGTCAGCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRTVPLV*WSAPLQ
Trigger: CTGAAGAGGAGCTGACCACCACACTAAAGGTACTGT...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGGCAAGTACATAAACTaGTACCTTGTAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADGKYIN*YLVMKR
Trigger: CCTCTTCATTACAAGGTACCAGTTTATGTACTTGCC...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACGAAAACTTTTGCATGTaGTTCAATAGTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHENFCM*FNSQGE
Trigger: TTCTCCCTGACTATTGAACCACATGCAAAAGTTTTC...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATACTCTGGGCTTTATGTaGCTTCCTCTCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHTLGFM*LPLPHH
Trigger: GTGATGGGGGAGAGGAAGCCACATAAAGCCCAGAGT...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGAAATGAGAACTCTTTaGGGTCCCAAGAACCACTGC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKEMRTL*GPKNHC
Trigger: GCAGTGGTTCTTGGGACCCCAAAGAGTTCTCATTTC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CAA 72 bp ATGAAAGAGAAAACCTTTGTCTGGAACTTCTTGGCTTaGTGCAAGCTGTGTCCAAGGCAAGTACATAAACTG +
Preference number: 4 (lower is better)
Translates to: MKEKTFVWNFLA*CKLCPRQVHKL
Trigger: CAGTTTATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATGCTTGGGAATATTTGTaGTCGTCAGGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHAWEYL*SSGCPL
Trigger: AAGAGGGCAGCCTGACGATCACAAATATTCCCAAGC...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAGTAGAACACTGTTTTaGAGCAGCTGTCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRSRTLF*SSCLHD
Trigger: ATCGTGGAGACAGCTGCTTCAAAACAGTGTTCTACT...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTAGACTTCCTTATTACTaGGTAAACCTTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLPELILAHQLCYFSSWCRLPYY*VNLGQF
Trigger: AAACTGACCAAGGTTTACTCAGTAATAAGGAAGTCT...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATAGACTTCCTTATTACTaGGTAAACCTTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADRLPYY*VNLGQF
Trigger: AAACTGACCAAGGTTTACTCAGTAATAAGGAAGTCT...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCACATCACCCTTACCTaGGTTAATCCTAGCACACCA +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYHITLT*VNPSTP
Trigger: TGGTGTGCTAGGATTAACTCAGGTAAGGGTGATGTG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTTTAGGGTTTATTCCCTaGGAGGTGGTTTGTGCCATC +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTLGFIP*EVVCAI
Trigger: GATGGCACAAACCACCTCTCAGGGAATAAACCCTAA...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGAAGTCCTCCTTGAGTaGTGTCTTAGGGTTTATTCC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKEVLLE*CLRVYS
Trigger: GGAATAAACCCTAAGACATCACTCAAGGAGGACTTC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR TCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAGAAGTCCTCCTTGAGTaGTGTCTTAGGGTTTATTCC +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKREVLLE*CLRVYS
Trigger: GGAATAAACCCTAAGACATCACTCAAGGAGGACTTC...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR TCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACGAAGTCCTCCTTGAGTaGTGTCTTAGGGTTTATTCC +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNEVLLE*CLRVYS
Trigger: GGAATAAACCCTAAGACATCACTCAAGGAGGACTTC...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR TCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATGTCATGACACACACATaGGTCCACTGTGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHVMTHT*VHCAFL
Trigger: GAGAAAGGCACAGTGGACTCATGTGTGTGTCATGAC...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCCCCCAATCCTCTCCTaGAACTTAAAAACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYPPILS*NLKTVG
Trigger: TCCCACTGTTTTTAAGTTTCAGGAGAGGATTGGGGG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACTAGGTTGGGTCAGCTaGATGAGATGCAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKLGWVS*MRCKVL
Trigger: CAATACCTTGCATCTCATTCAGCTGACCCAACCTAG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCTACCATCTCCAGTTTaGATAGGAAATCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYLPSPV*IGNPSA
Trigger: AGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAATCAACACTGGACAAATaGTGGAGCAGGTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKSTLDK*WSRFIW
Trigger: CCAGATAAACCTGCTCCAGCATTTGTCCAGTGTTGA...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAAACTTCTTGGCTTTGTaGAAGCTGTGTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLNFLAL*KLCPRQ
Trigger: TTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTT...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCTCTTCTTCCTCCAGTaGTTCCTGAAAGCTATAGGC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYLFFLQ*FLKAIG
Trigger: GCCTATAGCTTTCAGGAACCACTGGAGGAAGAAGAG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATACAGTACCTTTAGTGTaGTGGTCAGCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYTVPLV*WSAPLQ
Trigger: CTGAAGAGGAGCTGACCACCACACTAAAGGTACTGT...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAGTACCTTTAGTGTaGTGGTCAGCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRTVPLV*WSAPLQ
Trigger: CTGAAGAGGAGCTGACCACCACACTAAAGGTACTGT...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAATTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTTTGTAGCCTTTTCCTaGGCTTCAGCTCCCCTACTT +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYFVAFS*ASAPLL
Trigger: AAGTAGGGGAGCTGAAGCCCAGGAAAAGGCTACAAA...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGGGAAGGGCTCACTATTaGAATCCCATGAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKGRAHY*NPMSFH
Trigger: ATGGAAACTCATGGGATTCCAATAGTGAGCCCTTCC...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAACAACCTCCACCTACTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQTTSTY*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGTAGGTGGAGGTTGT...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAACTGTCTTCCCATGTTaGCCTTTCAGACTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKTVFPC*PFRLSP
Trigger: AGGACTTAGTCTGAAAGGCCAACATGGGAAGACAGT...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp ATCTGTGTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCAACAAAACCGTACATATaGATCAGTTGCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: ICVVRIWFNKTVHMNQLPTKPYI*ISCQLA
Trigger: GGCTAACTGGCAACTGATTCATATGTACGGTTTTGT...TGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR TCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTAGTAGAACACTGTTTTaGAGCAGCTGTCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTSRTLF*SSCLHD
Trigger: ATCGTGGAGACAGCTGCTTCAAAACAGTGTTCTACT...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAATTGTGCCATCTAGACTaGACTTTGGGTAACTATCGA +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKLCHLD*TLGNYR
Trigger: TCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAA...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTGTGCCATCTAGACTaGACTTTGGGTAACTATCGA +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLLCHLD*TLGNYR
Trigger: TCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAA...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAACCGAGTTCATAAACTaGCTGAAGAATCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKTEFIN*LKNPFS
Trigger: GCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGT...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCAACCGAGTTCATAAACTaGCTGAAGAATCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QWEYRKGNQISLINCSPPTEFIN*LKNPFS
Trigger: GCTGAAAGGATTCTTCAGTCAGTTTATGAACTCGGT...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTAATGAGACTGGAGACTaGAAACCATCTGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTNETGD*KPSVSR
Trigger: CCTAGAGACAGATGGTTTTCAGTCTCCAGTCTCATT...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCATTACCTTCATTGAGCTaGTTAAAAACCCAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPLPSLS*LKTQRL
Trigger: TAAACGCTGGGTTTTTAATCAGCTCAATGAAGGTAA...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAACAGCTGTCTCCACGATaGTTTGAGCTTGGGAATATT +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKQLSPR*FELGNI
Trigger: AATATTCCCAAGCTCAAAGCATCGTGGAGACAGCTG...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTCAGCTGTCTCCACGATaGTTTGAGCTTGGGAATATT +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLQLSPR*FELGNI
Trigger: AATATTCCCAAGCTCAAAGCATCGTGGAGACAGCTG...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCCAGTTAGACGAAACTaGATCTCTGTTGTACGTGTC +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTPVRRN*ISVVRV
Trigger: GACACGTACAACAGAGATGCAGTTTCGTCTAACTGG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAATTTGAGACGGAGTGTTaGTCTGTCACTCAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQFETEC*SVTQSA
Trigger: TGCAGACTGAGTGACAGAGCAACACTCCGTCTCAAA...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCTTTTTGAATGCAATTaGAAATCAGCTCCGGTACCC +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKLFECN*KSAPVP
Trigger: GGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACTCTTCTTCCTCCAGTaGTTCCTGAAAGCTATAGGC +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQLFFLQ*FLKAIG
Trigger: GCCTATAGCTTTCAGGAACCACTGGAGGAAGAAGAG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGTACCTTTAGTGTGGTaGTCAGCTCCTCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQVPLVW*SAPLQS
Trigger: TGACTGAAGAGGAGCTGACCACCACACTAAAGGTAC...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ATCTGTGTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCACTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: ICVVRIWFNKTVHMNQLPLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...TGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAACACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAATATGTCCAGGAACATaGGAAGGGCTCACTATTGGA +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKICPGT*EGLTIG
Trigger: TCCAATAGTGAGCCCTTCCCATGTTCCTGGACATAT...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTTGTCTGGAACTTCTTaGCTTTGTGCAAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYLSGTS*LCASCV
Trigger: GACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAA...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 72 bp AAATACATGAAAGAGAAAACCTTTGTCTGGAACTTCTaGGCTTTGTGCAAGCTGTGTCCAAGGCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: KYMKEKTFVWNF*ALCKLCPRQVH
Trigger: ATGTACTTGCCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAAGGTTTTCTCTTTCATGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
3UTR CAA 72 bp AGCTCATTCTGGAAATTACTACTTTTTGTACTAACTTaGTGTGCCATGTACTCTGGGCTTTATGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSFWKLLLFVLT*CAMYSGLYVAS
Trigger: GGAAGCCACATAAAGCCCAGAGTACATGGCACACAAAGTTAGTACAAAAAGTAGTAATTTCCAGAATGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CAA 72 bp GTTAAGGAACTTGGACTTTTCCTCATTACCTCTGGGTaGAAAGCAGTAGCAATAACAGGATCATACTTGCAT +
Preference number: 4 (lower is better)
Translates to: VKELGLFLITSG*KAVAITGSYLH
Trigger: ATGCAAGTATGATCCTGTTATTGCTACTGCTTTCAACCCAGAGGTAATGAGGAAAAGTCCAAGTTCCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATACAAAACCGTACATATaGATCAGTTGCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYTKPYI*ISCQLA
Trigger: GGCTAACTGGCAACTGATTCATATGTACGGTTTTGT...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTACAAAACCGTACATATaGATCAGTTGCCAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLTKPYI*ISCQLA
Trigger: GGCTAACTGGCAACTGATTCATATGTACGGTTTTGT...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR TCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAAGTAGAACACTGTTTTaGAGCAGCTGTCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQSRTLF*SSCLHD
Trigger: ATCGTGGAGACAGCTGCTTCAAAACAGTGTTCTACT...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTTGCCTTACCTTTCATaGCTGTCAAGTTTTATGGCC +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLLPYLS*LSSFMA
Trigger: GGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR TCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAACGTATTCCAAAGCTaGCTGCATTTGTACCATCTT +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKNVFQS*LHLYHL
Trigger: AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTT...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAAACGTATTCCAAAGCTaGCTGCATTTGTACCATCTT +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKNVFQS*LHLYHL
Trigger: AAGATGGTACAAATGCAGTCAGCTTTGGAATACGTT...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGTATTCTGAACAGCTGTaGGGTAGATACCATTATCTG +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKYSEQL*GRYHYL
Trigger: CAGATAATGGTATCTACCTCACAGCTGTTCAGAATA...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAATGTGGGATACAATTGTaGGCAAAATGGATGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKCGIQL*AKWMVP
Trigger: AGGAACCATCCATTTTGCTCACAATTGTATCCCACA...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCGCTCGTACACTAGGTaGCTTTCAGCTTCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHRSYTR*LSASVF
Trigger: AAAAACTGAAGCTGAAAGGCACCTAGTGTACGAGCG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACAGCTGTCTCCACGATaGTTTGAGCTTGGGAATATT +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQQLSPR*FELGNI
Trigger: AATATTCCCAAGCTCAAAGCATCGTGGAGACAGCTG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCAGCTGTCTCCACGATaGTTTGAGCTTGGGAATATT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHQLSPR*FELGNI
Trigger: AATATTCCCAAGCTCAAAGCATCGTGGAGACAGCTG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGATCACTGTGCCCAGCCTaGAGTGTTAGAATACTTAAT +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRSLCPA*SVRILN
Trigger: ATTAAGTATTCTAACACTGCAGGCTGGGCACAGTGA...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLDWRCD*LSGLVC
Trigger: ACATACTAAACCACTTAGCCAATCACAACGCCAATC...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRQSILD*RCDWLS
Trigger: ACTTAGCCAATCACAACGCCAATCTAGAATACTCTG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKQSILD*RCDWLS
Trigger: ACTTAGCCAATCACAACGCCAATCTAGAATACTCTG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGACTACCGTATGTCCACTaGCTTTGGTTAAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRLPYVH*LWLKLR
Trigger: TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAG...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATTTATTCCCTGAGAGGTaGTTTGTGCCATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHLFPER*FVPSRL
Trigger: CAGTCTAGATGGCACAAACCACCTCTCAGGGAATAA...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGACTGTCAAGTTTTATaGCCAGAGAGGACAAAACAG +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRDCQVL*PERTKQ
Trigger: CTGTTTTGTCCTCTCTGGCCATAAAACTTGACAGTC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTCCATCTTATTTCTTTTaGGGATTATACACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESPSYFF*GLYTSA
Trigger: GGCTGAGGTGTATAATCCCCAAAAGAAATAAGATGG...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCCATCTTATTTCTTTTaGGGATTATACACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKPSYFF*GLYTSA
Trigger: GGCTGAGGTGTATAATCCCCAAAAGAAATAAGATGG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCCAACCTGTGCTATTTaGAGTATATTAATCCACCTG +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKPTCAI*SILIHL
Trigger: CAGGTGGATTAATATACTCCAAATAGCACAGGTTGG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHSRLAL*LAKWFS
Trigger: ACTAAACCACTTAGCCAATCACAACGCCAATCTAGA...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAAGACTTCCTTATTACTaGGTAAACCTTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLRLPYY*VNLGQF
Trigger: AAACTGACCAAGGTTTACTCAGTAATAAGGAAGTCT...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTAGACTTCCTTATTACTaGGTAAACCTTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESRLPYY*VNLGQF
Trigger: AAACTGACCAAGGTTTACTCAGTAATAAGGAAGTCT...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAATTGCCTTACCTTTCATaGCTGTCAAGTTTTATGGCC +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQLPYLS*LSSFMA
Trigger: GGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAA...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR TCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTACCATACAGGCTAAGCTaGATAATGACAAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLPYRLS*IMTKLK
Trigger: TTTCAACTTTGTCATTATTCAGCTTAGCCTGTATGG...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR TCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTGTACAGTTGGTACGTaGAAGGATATAAAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESCTVGT*KDIKLS
Trigger: GCTTAACTTTATATCCTTTCACGTACCAACTGTACA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR TCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAAACCAAAGATTAATTTaGAAGCCTCTGTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKNQRLI*KPLSET
Trigger: GGTTTCTGACAGAGGCTTTCAAATTAATCTTTGGTT...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACTAGCACACCAACTTTaGTACTTTTCCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQLAHQL*YFSSWC
Trigger: ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR GCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACAAAATGGATGGTTCCTaGCCTCTTAATACTCATTCT +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNKMDGS*PLNTHS
Trigger: AGAATGAGTATTAAGAGGGCAGGAACCATCCATTTT...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGT +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYDWRCD*LSGLVC
Trigger: ACATACTAAACCACTTAGCCAATCACAACGCCAATC...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTQSILD*RCDWLS
Trigger: ACTTAGCCAATCACAACGCCAATCTAGAATACTCTG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCAGTTAGCTTACTGAGTAAACCTTaGTCAGTTTTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VVRIWFNKTVHMNQLPVSLLSKP*SVFKSV
Trigger: CACAGACTTAAAAACTGACCAAGGTTTACTCAGTAA...GCTAACTGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACCCTGGGAGCTCATTCTaGAAATTACTACTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNPGSSF*KLLLFV
Trigger: TACAAAAAGTAGTAATTTCCAGAATGAGCTCCCAGG...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219315.9
3UTR CAA 72 bp AGGATATGGTTCAACAAAACCGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCCATAAGTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: RIWFNKTVHMNQ*PVSHLPISVEN
Trigger: ATTTTCAACACTTATGGGCAAATGGCTAACTGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR TCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACTTCCTTATTACTaGGTAAACCTTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKRLPYY*VNLGQF
Trigger: AAACTGACCAAGGTTTACTCAGTAATAAGGAAGTCT...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR TCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTCCATACAGGCTAAGCTaGATAATGACAAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLPYRLS*IMTKLK
Trigger: TTTCAACTTTGTCATTATTCAGCTTAGCCTGTATGG...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTAACCCACTTAAAATTTaGCTTACCTTTCATGACTGT +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESNPLKI*LTFHDC
Trigger: ACAGTCATGAAAGGTAAGGCAAATTTTAAGTGGGTT...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CCA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACTTACTGAGTAAACCTTaGTCAGTTTTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNLLSKP*SVFKSV
Trigger: CACAGACTTAAAAACTGACCAAGGTTTACTCAGTAA...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAATTACTGAGTAAACCTTaGTCAGTTTTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKLLSKP*SVFKSV
Trigger: CACAGACTTAAAAACTGACCAAGGTTTACTCAGTAA...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGTTACTGAGTAAACCTTaGTCAGTTTTTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKLLSKP*SVFKSV
Trigger: CACAGACTTAAAAACTGACCAAGGTTTACTCAGTAA...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAATGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGTGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTTATGTCCACTGGCTTTaGTTAAAACTGAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESYVHWL*LKLRTK
Trigger: TTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATA...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATATGTCCACTGGCTTTaGTTAAAACTGAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLYVHWL*LKLRTK
Trigger: TTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATA...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGGTTTTGCAAATGTATTaGTCCCTGTGTTGTATTTTG +
Preference number: 4 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKVLQMY*SLCCIL
Trigger: CAAAATACAACACAGGGACCAATACATTTGCAAAAC...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR GCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTATAAAGTTAAGCCAATaGTTACTGGCATTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTIKLSQ*LLAFGK
Trigger: TTTTCCGAATGCCAGTAAGCATTGGCTTAACTTTAT...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAATATGTCCACTGGCTTTaGTTAAAACTGAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKYVHWL*LKLRTK
Trigger: TTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATA...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGATATGTCCACTGGCTTTaGTTAAAACTGAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRYVHWL*LKLRTK
Trigger: TTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATA...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTATGTCCACTGGCTTTaGTTAAAACTGAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYYVHWL*LKLRTK
Trigger: TTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATA...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CCA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGTTTTGCAAATGTATTaGTCCCTGTGTTGTATTTTG +
Preference number: 4 (lower is better)
Translates to: TQQDLLITTVCPLALVKTVLQMY*SLCCIL
Trigger: CAAAATACAACACAGGGACCAATACATTTGCAAAAC...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CCA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTGCTTCATGTACAGTTaGTACGTGAAAGGATATAAA +
Preference number: 4 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLCFMYS*YVKGYK
Trigger: TTTATATCCTTTCACGTACCAACTGTACATGAAGCA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR GCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAAACCCACTTAAAATTTaGCTTACCTTTCATGACTGT +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQNPLKI*LTFHDC
Trigger: ACAGTCATGAAAGGTAAGGCAAATTTTAAGTGGGTT...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CCA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAATGCTACTTTTCCTCTTaGTGTTTAGTAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQCYFSS*CLVSKR
Trigger: TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCA...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS CCA 90 bp CGTCCACGGGCCCCGCCACCCGTGGACGCTTCGCCTGGGTCGCCATaGTCTAAGAGCGCGTTTCCTCGCGGGCCGGCGCACCGCGCGGTC +
Preference number: 5 (lower is better)
Translates to: RPRAPPPVDASPGSP*SKSAFPRGPAHRAV
Trigger: GACCGCGCGGTGCGCCGGCCCGCGAGGAAACGCGCTCTTAGACCATGGCGACCCAGGCGAAGCGTCCACGGGTGGCGGGGCCCGTGGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310682.6
ENST00000394266.8
CDS TCA 90 bp CAGCAGTGGCACCCAGCCCGACTGGCTCTGCAGCGCAACTCGCTCTaGGGAAGACACAGGTGTGAGCGCCCCGGCGCGGCCTCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: QQWHPARLALQRNSL*GRHRCERPGAASRA
Trigger: GGCCCGCGAGGCCGCGCCGGGGCGCTCACACCTGTGTCTTCCTCAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCCACTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS GCA 90 bp GCAACTCGCTCTCGCTCCAGCAGGCCGCCGATGGAGCAGGTGTGCTaGGACAGGAGCGCGGCCCGCGGCACCACGAACAACAGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: ATRSRSSRPPMEQVC*DRSAARGTTNNSSP
Trigger: CGGAGAGCTGTTGTTCGTGGTGCCGCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGGAGCGAGAGCGAGTTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000468223.1
ENST00000470003.5
ENST00000492050.5
CDS GCA 90 bp AGCGCAACTCGCTCTCGCTCCAGCAGGCCGCCGATGGAGCAGGTGTaGTGCGACAGGAGCGCGGCCCGCGGCACCACGAACAACAGCTCT +
Preference number: 5 (lower is better)
Translates to: SATRSRSSRPPMEQV*CDRSAARGTTNNSS
Trigger: AGAGCTGTTGTTCGTGGTGCCGCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGGAGCGAGAGCGAGTTGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000468223.1
ENST00000470003.5
ENST00000492050.5
CDS GCA 90 bp TGCGGATGTTGGCCAAATCCTTCTCCACGGCCTCAGGTACGCCTGTaGCCTGGAGCAGGCACCGGCGCTCCTCCTCTGGCCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: CGCWPNPSPRPQVRL*PGAGTGAPPLACRD
Trigger: GTCCCTGCAGGCCAGAGGAGGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGGCCGTGGAGAAGGATTTGGCCAACATCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS GCA 90 bp TGCGGATGTTGGCCAAATCCTTCTCCACGGCCTCAGGTACGCCTGTaGCCTGGAGCAGGCACCGGCGCTCCTCCTCTGGCCAGAACATCG +
Preference number: 5 (lower is better)
Translates to: CGCWPNPSPRPQVRL*PGAGTGAPPLARTS
Trigger: CGATGTTCTGGCCAGAGGAGGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGGCCGTGGAGAAGGATTTGGCCAACATCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
CDS CCA 90 bp ATGTTGGCCAAATCCTTCTCCACGGCCTCAGGTACGCCTGTGCCCTaGAGCAGGCACCGGCGCTCCTCCTCTGGCCAGAACATCGGGTGC +
Preference number: 5 (lower is better)
Translates to: MLAKSFSTASGTPVP*SRHRRSSSGQNIGC
Trigger: GCACCCGATGTTCTGGCCAGAGGAGGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGGCCGTGGAGAAGGATTTGGCCAACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
CDS CCA 90 bp CTGAAGAGATCGGGGTGGGCTTCCATGAAGGGCAGCACGATGGACTaGTACTCGCTGCGGATGTTGGCCAAATCCTTCTCCACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LKRSGWASMKGSTMD*YSLRMLAKSFSTAS
Trigger: TGAGGCCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCCCTTCATGGAAGCCCACCCCGATCTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000467320.1
CDS-3UTR CAA 90 bp TCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTTCACGGCTGACCGCCACCTaGGGACTCAGCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSLHRKSQRSYTRCLSASRLTAT*GLSSSP
Trigger: GGGGCTGGAGCTGAGTCCCAAGGTGGCGGTCAGCCG...TGAAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS CCA 90 bp GGGACACCCACACCCAGGTTCCCTTCATTCCTTCACACACTTTACTaGGTAGGACTGGTGCAGGGGCGGGGAAACTTCTTGCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GTPTPRFPSFLHTLY*VGLVQGRGNFLQQA
Trigger: AGCCTGCTGCAAGAAGTTTCCCCGCCCCTGCACCAGTCCTACCCAGTAAAGTGTGTGAAGGAATGAAGGGAACCTGGGTGTGGGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467320.1
ENST00000470003.5
CDS-3UTR CAA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAATCCCAGCCCTTTGGTTaGTGGGTATCTGCCCCAACT +
Preference number: 5 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQSQPFG*WVSAPT
Trigger: AGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGA...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS TCA 90 bp TTTAGGAATGGGCTGAGTGGCTACCATCCGAAGACAATTCTGAGGTaGAAGGGAGAAGCTGGGGCCATGCCTTTCACGGGCCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: FRNGLSGYHPKTILR*KGEAGAMPFTGQPH
Trigger: ATGGGGCTGGCCCGTGAAAGGCATGGCCCCAGCTTCTCCCTTTCACCTCAGAATTGTCTTCGGATGGTAGCCACTCAGCCCATTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463954.1
CDS CCA 90 bp GAAGCTGGGGCCATGCCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACGGGGG +
Preference number: 5 (lower is better)
Translates to: EAGAMPQSILDWRCD*LSGLVCLQQAPSRG
Trigger: CCCCCGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGCATGGCCCCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS TCA 90 bp GGGAGAAGCTGGGGCCATGCCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACG +
Preference number: 5 (lower is better)
Translates to: GRSWGHAAEYSRLAL*LAKWFSMSAAGTIT
Trigger: CGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGCATGGCCCCAGCTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CAA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGACCATCACGGGGGAGTaGGGCTCCTTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVTITGE*GSFSSS
Trigger: AGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGGT...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GATGCCATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGGACTTTCCCAGCCCTTaGGTTTGTGGGTATCTGCCC +
Preference number: 5 (lower is better)
Translates to: DAMHLSEGIAPCLLTFLVDFPSP*VCGYLP
Trigger: GGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTC...CACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCATGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAAACTGTCTTCCCATGTaGGCCTTTCAGACTAAGTCC +
Preference number: 5 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQNCLPM*AFQTKS
Trigger: GGACTTAGTCTGAAAGGCCAACATGGGAAGACAGTT...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTTCAACCATCACGGGGGAGTaGGGCTCCTTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SSLHRKSQRSYTRCLSASTITGE*GSFSSS
Trigger: AGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGGT...TGAAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAAGCTGTGTCATCTGTGTaGTCAGGATATGGTTCAACA +
Preference number: 5 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQAVSSV*SGYGST
Trigger: TGTTGAACCATATCCTGACAACACAGATGACACAGC...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp AGCTGTCTCCACGATGCTTTGAGCTTGGGAATATTTGTGATCGTCAGGCTGCCCCCTACCATCTCCAGTTaGCATAGGAAATCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SCLHDALSLGIFVIVRLPPTISS*HRKSQR
Trigger: GCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGG...GGGCAGCCTGACGATCACAAATATTCCCAAGCTCAAAGCATCGTGGAGACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGCGGCTGACCGCCACCTaGGGACTCAGCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKRLTAT*GLSSSP
Trigger: GGGGCTGGAGCTGAGTCCCAAGGTGGCGGTCAGCCG...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS CCA 90 bp GAGAAACTCCACTCACCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACGGGGG +
Preference number: 5 (lower is better)
Translates to: EKLHSPQSILDWRCD*LSGLVCLQQAPSRG
Trigger: CCCCCGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGTGAGTGGAGTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS-3UTR CAA 90 bp AGGTTATTCCAGTCGGTCGCACAGTGCTGCATGGGACAGAAGCAGGCCCAGCAATTTCAGCTTCAGTTTTaGTTCCCTGTAATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RLFQSVAQCCMGQKQAQQFQLQF*FPVMLP
Trigger: AGGCAGCATTACAGGGAACAAAAACTGAAGCTGAAA...TTGCTGGGCCTGCTTCTGTCCCATGCAGCACTGTGCGACCGACTGGAATAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS CCA 90 bp CCATCCGAAGACAATTCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACGGGGG +
Preference number: 5 (lower is better)
Translates to: PSEDNSQSILDWRCD*LSGLVCLQQAPSRG
Trigger: CCCCCGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGAATTGTCTTCGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS CCA 90 bp ATGTCAGCTGTGTCATCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACGGGGG +
Preference number: 5 (lower is better)
Translates to: MSAVSSQSILDWRCD*LSGLVCLQQAPSRG
Trigger: CCCCCGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGATGACACAGCTGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418480.1
ENST00000422445.5
CDS-3UTR CAA 90 bp AGCTGTCTCCACGATGCTTTGAGCTTGGGAATATTTGTGATCGTCAGGCTGCCCCCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SCLHDALSLGIFVIVRLPPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...GGGCAGCCTGACGATCACAAATATTCCCAAGCTCAAAGCATCGTGGAGACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAATGGAACTTCTTGGCTTaGTGCAAGCTGTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQWNFLA*CKLCPR
Trigger: CCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCA...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTTCCCAGCCCTTTGGTTaGTGGGTATCTGCCCCAACT +
Preference number: 5 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLSQPFG*WVSAPT
Trigger: AGTTGGGGCAGATACCCACAAACCAAAGGGCTGGGA...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTGACTTTCCCAGCCCTTaGGTTTGTGGGTATCTGCCC +
Preference number: 5 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLDFPSP*VCGYLP
Trigger: GGGCAGATACCCACAAACCAAAGGGCTGGGAAAGTC...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp ACACATGAGTCCACTGTGCCTTTCTCAGTAGCAGCAGCCAGTGCTGGTGGTGAGGAATCTGTTGCCAGATaGCCTAGACTACATATAGCA +
Preference number: 5 (lower is better)
Translates to: THESTVPFSVAAASAGGEESVAR*PRLHIA
Trigger: TGCTATATGTAGTCTAGGCAATCTGGCAACAGATTC...CTCACCACCAGCACTGGCTGCTGCTACTGAGAAAGGCACAGTGGACTCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAACGGCTGACCGCCACCTaGGGACTCAGCTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FKPGVYLQSLLLNAETQQRLTAT*GLSSSP
Trigger: GGGGCTGGAGCTGAGTCCCAAGGTGGCGGTCAGCCG...TTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCCTGGTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS TCA 90 bp CCAAGAGAAACTCCACTCACCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACG +
Preference number: 5 (lower is better)
Translates to: PRETPLTAEYSRLAL*LAKWFSMSAAGTIT
Trigger: CGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGTGAGTGGAGTTTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS-3UTR CAA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTACCATCACGGGGGAGTaGGGCTCCTTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: GNRETANLSAPTTDVRSSTITGE*GSFSSS
Trigger: AGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGGT...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS TCA 90 bp GCTACCATCCGAAGACAATTCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACG +
Preference number: 5 (lower is better)
Translates to: ATIRRQFAEYSRLAL*LAKWFSMSAAGTIT
Trigger: CGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGAATTGTCTTCGGATGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS TCA 90 bp CTGAATGTCAGCTGTGTCATCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCATCACG +
Preference number: 5 (lower is better)
Translates to: LNVSCVIAEYSRLAL*LAKWFSMSAAGTIT
Trigger: CGTGATGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGATGACACAGCTGACATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418480.1
ENST00000422445.5
CDS CCA 90 bp TCAGTGCACCAAGAGAAACTCCACTCACCGCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SVHQEKLHSPQSILD*RCDWLSGLVCLQQA
Trigger: TGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGTGAGTGGAGTTTCTCTTGGTGCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS-3UTR CAA 90 bp TCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTTCATGTCTCCACGATGCTTaGAGCTTGGGAATATTTGTG +
Preference number: 5 (lower is better)
Translates to: SSLHRKSQRSYTRCLSASCLHDA*SLGIFV
Trigger: CACAAATATTCCCAAGCTCAAAGCATCGTGGAGACA...TGAAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp GTCTCTAGGTTGGGTCAGCTGAATGAGATGCAAGGTATTGTTAGGCCTACTCTTCCATCTGTCTCTAGGTaGGGTCAGCTGAATGAGATG +
Preference number: 5 (lower is better)
Translates to: VSRLGQLNEMQGIVRPTLPSVSR*GQLNEM
Trigger: CATCTCATTCAGCTGACCCAACCTAGAGACAGATGG...AAGAGTAGGCCTAACAATACCTTGCATCTCATTCAGCTGACCCAACCTAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCATGTCTCCACGATGCTTaGAGCTTGGGAATATTTGTG +
Preference number: 5 (lower is better)
Translates to: NGRDRCQLDETASLLYVSCLHDA*SLGIFV
Trigger: CACAAATATTCCCAAGCTCAAAGCATCGTGGAGACA...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp AGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGCCATGCACCCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RQVHKLVPCNEEAADAMHPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...GTGCATGGCATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCACAGCTCCCCTACTTCTaGTATGTGTATGCATACTGT +
Preference number: 5 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPQLPYF*YVYAYC
Trigger: ACAGTATGCATACACATACAAGAAGTAGGGGAGCTG...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCATTTGTCTGGAACTTCTaGGCTTTGTGCAAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPFVWNF*ALCKLC
Trigger: ACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAA...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCACCATCTGTCTCTAGGTaGGGTCAGCTGAATGAGATG +
Preference number: 5 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEAPSVSR*GQLNEM
Trigger: CATCTCATTCAGCTGACCCAACCTAGAGACAGATGG...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAATAGTTAGGAATCTGTaGCCAGATTGCCTAGACTAC +
Preference number: 5 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQIVRNL*PDCLDY
Trigger: GTAGTCTAGGCAATCTGGCAACAGATTCCTAACTAT...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS GCA 90 bp AGCACTAGTAAGAGAATGGAGCCTAAGACACAATGGCTTGAATCATaGTCAATCAGTGCACCAAGAGAAACTCCACTCACCGCAGAGTAT +
Preference number: 5 (lower is better)
Translates to: STSKRMEPKTQWLES*SISAPRETPLTAEY
Trigger: ATACTCTGCGGTGAGTGGAGTTTCTCTTGGTGCACTGATTGAGCATGATTCAAGCCATTGTGTCTTAGGCTCCATTCTCTTACTAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS-3UTR CAA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAACCATCACGGGGGAGTaGGGCTCCTTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLTITGE*GSFSSS
Trigger: AGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGGT...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTCCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PLPELILAHQLCYFSSWCPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp ATGCACTTGTCTGAGGGCATAGCTCCATGTCTTCTGACATTCCTGGTGTCCCAAGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: MHLSEGIAPCLLTFLVSQVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...TTGGGACACCAGGAATGTCAGAAGACATGGAGCTATGCCCTCAGACAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp CTACCATCTCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: LPSPVCIGNPSARTLGAFVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...AAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGAGATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAGTATTGGTCCCTGTGTaGTATTTTGTAGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPVLVPV*YFVAFS
Trigger: GGAAAAGGCTACAAAATACAACACAGGGACCAATAC...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GCCTCTGTCAGAAACCCAAACCCTAGCCAGTTAGAACTGTCTTCCCATGTTGGCATGAGATGCAAGGTATaGTTAGGCCTACTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: ASVRNPNPSQLELSSHVGMRCKV*LGLLFN
Trigger: ATTAAAGAGTAGGCCTAACAATACCTTGCATCTCAT...GCCAACATGGGAAGACAGTTCTAACTGGCTAGGGTTTGGGTTTCTGACAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATACCATCACGGGGGAGTaGGGCTCCTTTTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYTITGE*GSFSSS
Trigger: AGAGGATGAAAAGGAGCCCAACTCCCCCGTGATGGT...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTGCTGTGTCATCTGTGTaGTCAGGATATGGTTCAACA +
Preference number: 5 (lower is better)
Translates to: PLPELILAHQLCYFSSWCAVSSV*SGYGST
Trigger: TGTTGAACCATATCCTGACAACACAGATGACACAGC...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACCCTACCATCTCCAGTTaGCATAGGAAATCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNPTISS*HRKSQR
Trigger: GCGCTGGGATTTCCTATGCAAACTGGAGATGGTAGG...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CAA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTGTCTCCACGATGCTTaGAGCTTGGGAATATTTGTG +
Preference number: 5 (lower is better)
Translates to: PLPELILAHQLCYFSSWCCLHDA*SLGIFV
Trigger: CACAAATATTCCCAAGCTCAAAGCATCGTGGAGACA...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TCCAGTTTGCATAGGAAATCCCAGCGCTCGTACACTAGGTGCCTTTCAGCTTCAAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: SSLHRKSQRSYTRCLSASRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...TGAAGCTGAAAGGCACCTAGTGTACGAGCGCTGGGATTTCCTATGCAAACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGCTGATGCCATGCACTaGTCTGAGGGCATAGCTCCA +
Preference number: 5 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRADAMH*SEGIAP
Trigger: TGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCATCTGGAACCATGAATTaGTACACTGTGCCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEASGTMN*YTVPQK
Trigger: TTTCTGGGGCACAGTGTACAAATTCATGGTTCCAGA...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS CCA 90 bp AAGGGTTGGGCTAACTTTAAAAGGCCAGCTTCATGTTTAACTGGGTaGATTTCTGCACAGTCCTCTTCAGCACTTAAAAAGTTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: KGWANFKRPASCLTG*ISAQSSSALKKLLA
Trigger: AGCTAGCAACTTTTTAAGTGCTGAAGAGGACTGTGCAGAAATCCACCCAGTTAAACATGAAGCTGGCCTTTTAAAGTTAGCCCAACCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463954.1
CDS-3UTR CAA 90 bp AATGGAAGGGACAGGTGCCAGTTAGACGAAACTGCATCTCTGTTGTACGTGTCAAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: NGRDRCQLDETASLLYVSRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...TGACACGTACAACAGAGATGCAGTTTCGTCTAACTGGCACCTGTCCCTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GGATATGTCCAGGAACATGGGAAGGGCTCACTATTGGAATCCCATGAGTTTCCAAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: GYVQEHGKGSLLESHEFPRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCCATGTTCCTGGACATATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGGGAAGGGCTCACTATaGGAATCCCATGAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESGKGSL*ESHEFP
Trigger: TGGAAACTCATGGGATTCCAATAGTGAGCCCTTCCC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAGTGGATGTGCTAGAATaGGATATGTCCAGGAACATG +
Preference number: 5 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPVDVLE*DMSRNM
Trigger: CATGTTCCTGGACATATCCAATTCTAGCACATCCAC...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATGCTGATGCCATGCACTaGTCTGAGGGCATAGCTCCA +
Preference number: 5 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHADAMH*SEGIAP
Trigger: TGGAGCTATGCCCTCAGACAAGTGCATGGCATCAGC...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATGTTCTCTTGGAACGGTaGATTGTAAATAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADVLLER*IVNRPH
Trigger: ATGTGGCCTATTTACAATCAACCGTTCCAAGAGAAC...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp GAGATTTGTAACTGTCTTCATCCTTCAGGTTATTCCAGTCGGTCGCACAGTGCTGGTCGCTATCTCTTTTaGAATGCAATTGCAAATCAG +
Preference number: 5 (lower is better)
Translates to: EICNCLHPSGYSSRSHSAGRYLF*NAIANQ
Trigger: CTGATTTGCAATTGCATTCAAAAAGAGATAGCGACC...AGCACTGTGCGACCGACTGGAATAACCTGAAGGATGAAGACAGTTACAAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS GCA 90 bp GGGTTCATTTCTTCTTTAGTCTGCCACCCAGTCTACAAAGTCAACTaGTATTTAGCAAAGCTATTTAACCTGAGGCATGGGTATAGACAC +
Preference number: 5 (lower is better)
Translates to: GFISSLVCHPVYKVN*YLAKLFNLRHGYRH
Trigger: GTGTCTATACCCATGCCTCAGGTTAAATAGCTTTGCTAAATAGCAGTTGACTTTGTAGACTGGGTGGCAGACTAAAGAAGAAATGAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491587.1
CDS-3UTR CAA 90 bp GGGAACAGGGAAACTGCTAACTTGTCAGCTCCAACAACTGATGTAAGATCATCTTTGCCAGTTAGCCATTaGCCCATAAGTGTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: GNRETANLSAPTTDVRSSLPVSH*PISVEN
Trigger: ATTTTCAACACTTATGGGCAAATGGCTAACTGGCAA...AGATGATCTTACATCAGTTGTTGGAGCTGACAAGTTAGCAGTTTCCCTGTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CAA 90 bp GTTGTCAGGATATGGTTCAACAAAACCGTACATATGAATCAGTTGCCAGTTAGCGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCC +
Preference number: 5 (lower is better)
Translates to: VVRIWFNKTVHMNQLPVSVHMNQ*PVSHLP
Trigger: GGGCAAATGGCTAACTGGCAACTGATTCATATGTAC...GCTAACTGGCAACTGATTCATATGTACGGTTTTGTTGAACCATATCCTGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS-3UTR CAA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACCTAGCACACCAACTTaGCTACTTTTCCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRPSTPT*LLFLLV
Trigger: CACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp CTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCAGCTGATTGTGGACAGGGGACCTaGAAAATCACTAAGTTATTA +
Preference number: 5 (lower is better)
Translates to: LCPRQVHKLVPCNEEAADCGQGT*KITKLL
Trigger: TAATAACTTAGTGATTTTCAAGGTCCCCTGTCCACA...ATCAGCTGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTGGAACTTCTTGGCTTaGTGCAAGCTGTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLWNFLA*CKLCPR
Trigger: CCTTGGACACAGCTTGCACAAAGCCAAGAAGTTCCA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp CCCTTACCTGAGTTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTCCAACCTGTGCTATTaGGAGTATATTAATCCACCT +
Preference number: 5 (lower is better)
Translates to: PLPELILAHQLCYFSSWCSNLCY*EYINPP
Trigger: AGGTGGATTAATATACTCCAAATAGCACAGGTTGGA...ACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAACTCAGGTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCAAGAAATGAGAACTCTTaGGGGTCCCAAGAACCACTG +
Preference number: 5 (lower is better)
Translates to: QWEYRKGNQISLINCSPPRNENS*GSQEPL
Trigger: CAGTGGTTCTTGGGACCCCAAAGAGTTCTCATTTCT...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTAGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCC +
Preference number: 5 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLVHMNQ*PVSHLP
Trigger: GGGCAAATGGCTAACTGGCAACTGATTCATATGTAC...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp GAACTTTGGGTAACTATCGAGTACCAGTTACACAGCTTATTAAATCCAGAGTCTGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCC +
Preference number: 5 (lower is better)
Translates to: ELWVTIEYQLHSLLNPESVHMNQ*PVSHLP
Trigger: GGGCAAATGGCTAACTGGCAACTGATTCATATGTAC...AGACTCTGGATTTAATAAGCTGTGTAACTGGTACTCGATAGTTACCCAAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACGCTGTGTCATCTGTGTaGTCAGGATATGGTTCAACA +
Preference number: 5 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNAVSSV*SGYGST
Trigger: TGTTGAACCATATCCTGACAACACAGATGACACAGC...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS-3UTR CAA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACACGATGCTTTGAGCTaGGGAATATTTGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRHDALS*GIFVIV
Trigger: GACGATCACAAATATTCCCAAGCTCAAAGCATCGTG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACAGCTCCCCTACTTCTaGTATGTGTATGCATACTGT +
Preference number: 5 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRQLPYF*YVYAYC
Trigger: ACAGTATGCATACACATACAAGAAGTAGGGGAGCTG...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp CCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGAAAGTGGATGTGCTAGAATaGGATATGTCCAGGAACATG +
Preference number: 5 (lower is better)
Translates to: PSTPTLLLFLLVFSKQKKVDVLE*DMSRNM
Trigger: CATGTTCCTGGACATATCCAATTCTAGCACATCCAC...TTTCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp CTTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTTGTCTGGAACTTCTaGGCTTTGTGCAAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LPQTRLRFKPGVYLQSLLFVWNF*ALCKLC
Trigger: ACACAGCTTGCACAAAGCCAAGAAGTTCCAGACAAA...TAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp TGCAAGCTGTGTCCAAGGCAAGTACATAAACTGGTACCTTGTAATGAAGAGGCATCTATGTTAAGGAACTaGGACTTTTCCTCATTACCT +
Preference number: 5 (lower is better)
Translates to: CKLCPRQVHKLVPCNEEASMLRN*DFSSLP
Trigger: AGGTAATGAGGAAAAGTCCAAGTTCCTTAACATAGA...TGCCTCTTCATTACAAGGTACCAGTTTATGTACTTGCCTTGGACACAGCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAGTACATATGAATCAGTaGCCAGTTAGCCATTTGCCC +
Preference number: 5 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKVHMNQ*PVSHLP
Trigger: GGGCAAATGGCTAACTGGCAACTGATTCATATGTAC...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGCTGTGTCATCTGTGTaGTCAGGATATGGTTCAACA +
Preference number: 5 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRAVSSV*SGYGST
Trigger: TGTTGAACCATATCCTGACAACACAGATGACACAGC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp ATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGATTTCAGCTTCAGTTTTaGTTCCCTGTAATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ILAHQLCYFSSWCLVSKRFQLQF*FPVMLP
Trigger: AGGCAGCATTACAGGGAACAAAAACTGAAGCTGAAA...TCTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATCACGATGCTTTGAGCTaGGGAATATTTGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYHDALS*GIFVIV
Trigger: GACGATCACAAATATTCCCAAGCTCAAAGCATCGTG...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp ACACAACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTCACGATGCTTTGAGCTaGGGAATATTTGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: TQQDLLITTVCPLALVKTHDALS*GIFVIV
Trigger: GACGATCACAAATATTCCCAAGCTCAAAGCATCGTG...AGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATTGTCTCCACGATGCTTaGAGCTTGGGAATATTTGTG +
Preference number: 5 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYCLHDA*SLGIFV
Trigger: CACAAATATTCCCAAGCTCAAAGCATCGTGGAGACA...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TTTCTAGGTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAGGATTTTGAATGTTTaGCAAATGTATTGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FLGRYLFLNAIANQLRYPRILNV*QMYWSL
Trigger: CAGGGACCAATACATTTGCAAAACATTCAAAATCCT...TGGGTACCGGAGCTGATTTGCAATTGCATTCAAAAAGAGATAGCGACCTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAATTTCAGCTTCAGTTTTaGTTCCCTGTAATGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKFQLQF*FPVMLP
Trigger: AGGCAGCATTACAGGGAACAAAAACTGAAGCTGAAA...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATCACGATGCTTTGAGCTaGGGAATATTTGTGATCGTC +
Preference number: 5 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHHDALS*GIFVIV
Trigger: GACGATCACAAATATTCCCAAGCTCAAAGCATCGTG...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAACAAAACATTGTCTCCACGATGCTTaGAGCTTGGGAATATTTGTG +
Preference number: 5 (lower is better)
Translates to: YLLLPYVHWLWLKLRTKHCLHDA*SLGIFV
Trigger: CACAAATATTCCCAAGCTCAAAGCATCGTGGAGACA...ATGTTTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp AACAAGACTTACTTATTACTACCGTATGTCCACTGGCTTTGGTTAAAACTGAGAGTATTGGTCCCTGTGTaGTATTTTGTAGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NKTYLLLPYVHWLWLKLRVLVPV*YFVAFS
Trigger: GGAAAAGGCTACAAAATACAACACAGGGACCAATAC...TCTCAGTTTTAACCAAAGCCAGTGGACATACGGTAGTAATAAGTAAGTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp AATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAAGACCATCTTATTTCTTTaGGGGATTATACACCTCAGC +
Preference number: 5 (lower is better)
Translates to: NPSTPTLLLFLLVFSKQKTILFL*GIIHLS
Trigger: GCTGAGGTGTATAATCCCCAAAAGAAATAAGATGGT...CTTTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp CAGTGGGAATATAGGAAAGGGAACCAAATCTCATTAATTAATTGTTCTCCCCCATGTGGACAGGGGACCTaGAAAATCACTAAGTTATTA +
Preference number: 5 (lower is better)
Translates to: QWEYRKGNQISLINCSPPCGQGT*KITKLL
Trigger: TAATAACTTAGTGATTTTCAAGGTCCCCTGTCCACA...TGGGGGAGAACAATTAATTAATGAGATTTGGTTCCCTTTCCTATATTCCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAATTGCCAGTTAGCCATTaGCCCATAAGTGTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKLPVSH*PISVEN
Trigger: ATTTTCAACACTTATGGGCAAATGGCTAACTGGCAA...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTTTGCCAGTTAGCCATTaGCCCATAAGTGTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLLPVSH*PISVEN
Trigger: ATTTTCAACACTTATGGGCAAATGGCTAACTGGCAA...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
CDS-3UTR CAA 90 bp TTAATCCTAGCACACCAACTTTGCTACTTTTCCTCTTGGTGTTTAGTAAGCAAAGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: LILAHQLCYFSSWCLVSKVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...TTTGCTTACTAAACACCAAGAGGAAAAGTAGCAAAGTTGGTGTGCTAGGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTGTATGTCCACTGGCTTaGGTTAAAACTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLVCPLA*VKTENK
Trigger: TTTGTTCTCAGTTTTAACCAAAGCCAGTGGACATAC...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp GGGGTCTACCTCCAAAGTCTATTATTAAATGCTGAAACACAACAAGACTTACTTACCATCTTATTTCTTTaGGGGATTATACACCTCAGC +
Preference number: 5 (lower is better)
Translates to: GVYLQSLLLNAETQQDLLTILFL*GIIHLS
Trigger: GCTGAGGTGTATAATCCCCAAAAGAAATAAGATGGT...AAGTAAGTCTTGTTGTGTTTCAGCATTTAATAATAGACTTTGGAGGTAGACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp AAATTTGCCTTACCTTTCATGACTGTCAAGTTTTATGGCCAGAGAGGACAAAACTTTTCCAGAGTTCTCTaGGAACGGTTGATTGTAAAT +
Preference number: 5 (lower is better)
Translates to: KFALPFMTVKFYGQRGQNFSRVL*ERLIVN
Trigger: ATTTACAATCAACCGTTCCAAGAGAACTCTGGAAAA...GTTTTGTCCTCTCTGGCCATAAAACTTGACAGTCATGAAAGGTAAGGCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219315.9
CDS-3UTR CAA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATAGAATAAAGTTCTTATaGCTGTTCCTTCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYRIKFL*LFLQGT
Trigger: TGTTCCCTGAAGGAACAGCAATAAGAACTTTATTCT...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000422445.5
ENST00000427443.5
CDS-3UTR CAA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATAGGATTTTGAATGTTTaGCAAATGTATTGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYRILNV*QMYWSL
Trigger: CAGGGACCAATACATTTGCAAAACATTCAAAATCCT...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS-3UTR CAA 90 bp TTCCTCAAACTAGACTTAGATTTAAACCAGGGGTCTACCTCCAAAGTCTATTATATGAGATGCAAGGTATaGTTAGGCCTACTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: FLKLDLDLNQGSTSKVYYMRCKV*LGLLFN
Trigger: ATTAAAGAGTAGGCCTAACAATACCTTGCATCTCAT...ATAATAGACTTTGGAGGTAGACCCCTGGTTTAAATCTAAGTCTAGTTTGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219315.9
ENST00000394266.8
CDS CAA 90 bp CCGCTGGGAACTGCAGGAGACCGCGGCGCGAGCGCAGAACGGGCTTaGGGTGGAGGAGGGGACGAGCGGAGAGGGGCGCGGGACCCGCGG +
Preference number: 6 (lower is better)
Translates to: PLGTAGDRGASAERA*GGGGDERRGARDPR
Trigger: CCGCGGGTCCCGCGCCCCTCTCCGCTCGTCCCCTCCTCCACCCAAAGCCCGTTCTGCGCTCGCGCCGCGGTCTCCTGCAGTTCCCAGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468223.1
ENST00000492050.5
CDS CCA 72 bp GCAGCGCAACTCGCTCTCGCTCCAGCAGGCCGCCGATaGAGCAGGTGTGCTGCGACAGGAGCGCGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: AAQLALAPAGRR*SRCAATGARPA
Trigger: CGCGGGCCGCGCTCCTGTCGCAGCACACCTGCTCCATCGGCGGCCTGCTGGAGCGAGAGCGAGTTGCGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000468223.1
ENST00000470003.5
ENST00000492050.5
CDS CCA 72 bp GCCCCGCCACCCGTGGACGCTTCGCCTGGGTCGCCATaGTCTAAGAGCGCGTTTCCTCGCGGGCCGGCGCAC +
Preference number: 6 (lower is better)
Translates to: APPPVDASPGSP*SKSAFPRGPAH
Trigger: GTGCGCCGGCCCGCGAGGAAACGCGCTCTTAGACCATGGCGACCCAGGCGAAGCGTCCACGGGTGGCGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
ENST00000470003.5
CDS GCA 72 bp AGCGCCAGCAGCAGTGGCACCCAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTCGCTCCAGCAGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SASSSGTQPDWL*SATRSRSSRPP
Trigger: CGGCGGCCTGCTGGAGCGAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCCACTGCTGCTGGCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000470003.5
ENST00000492050.5
CDS TCA 72 bp CACCCAGCCCGACTGGCTCTGCAGCGCAACTCGCTCTaGGGAAGACACAGGTGTGAGCGCCCCGGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: HPARLALQRNSL*GRHRCERPGAA
Trigger: GGCCGCGCCGGGGCGCTCACACCTGTGTCTTCCTCAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS CCA 72 bp AGGAAAAGGCTGGACCCCGCGCCCGCCACTCACCCGTaGACGCTTCGCCTGGGTCGCCATGGTCTAAGAGCG +
Preference number: 6 (lower is better)
Translates to: RKRLDPAPATHP*TLRLGRHGLRA
Trigger: CGCTCTTAGACCATGGCGACCCAGGCGAAGCGTCCACGGGTGAGTGGCGGGCGCGGGGTCCAGCCTTTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492050.5
CDS CCA 72 bp AAATCCTTCTCCACGGCCTCAGGTACGCCTGTGCCCTaGAGCAGGCACCGGCGCTCCTCCTCTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: KSFSTASGTPVP*SRHRRSSSGLQ
Trigger: CTGCAGGCCAGAGGAGGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGGCCGTGGAGAAGGATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS GCA 72 bp AGCGCCAGCAGCAGTGGCACCCAGCCCGACTGGCTCTaGAGCGCAACTCGCTCTGAGGAAGACACAGGTGTG +
Preference number: 6 (lower is better)
Translates to: SASSSGTQPDWL*SATRSEEDTGV
Trigger: CACACCTGTGTCTTCCTCAGAGCGAGTTGCGCTGCAGAGCCAGTCGGGCTGGGTGCCACTGCTGCTGGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS CCA 72 bp AAATCCTTCTCCACGGCCTCAGGTACGCCTGTGCCCTaGAGCAGGCACCGGCGCTCCTCCTCTGGCCAGAAC +
Preference number: 6 (lower is better)
Translates to: KSFSTASGTPVP*SRHRRSSSGQN
Trigger: GTTCTGGCCAGAGGAGGAGCGCCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGGCCGTGGAGAAGGATTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
CDS CAA 90 bp GCTTCCATGAAGGGCAGCACGATGGACTGGTACTCGCTGCGGATGTaGGCCAAATCCTTCTCCACGGCCTCAGGTACGCCTGTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ASMKGSTMDWYSLRM*AKSFSTASGTPVPW
Trigger: CCAGGGCACAGGCGTACCTGAGGCCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCCCTTCATGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000467320.1
CDS CCA 72 bp AGGGCAGCACGATGGACTGGTACTCGCTGCGGATGTTaGCCAAATCCTTCTCCACGGCCTCAGGTACGCCTG +
Preference number: 6 (lower is better)
Translates to: RAARWTGTRCGC*PNPSPRPQVRL
Trigger: CAGGCGTACCTGAGGCCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000467320.1
CDS CCA 72 bp TCGGGGTGGGCTTCCATGAAGGGCAGCACGATGGACTaGTACTCGCTGCGGATGTTGGCCAAATCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SGWASMKGSTMD*YSLRMLAKSFS
Trigger: GGAGAAGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCCCTTCATGGAAGCCCACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000467320.1
CDS CAA 72 bp AAGGGCAGCACGATGGACTGGTACTCGCTGCGGATGTaGGCCAAATCCTTCTCCACGGCCTCAGGTACGCCT +
Preference number: 6 (lower is better)
Translates to: KGSTMDWYSLRM*AKSFSTASGTP
Trigger: AGGCGTACCTGAGGCCGTGGAGAAGGATTTGGCCAACATCCGCAGCGAGTACCAGTCCATCGTGCTGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000418480.1
ENST00000422445.5
ENST00000427443.5
ENST00000467320.1
CDS TCA 72 bp AGAAGCTGGGGCCATGCCTTTCACGGGCCAGCCCCATaGAGATTATTTCCACTTAAGAAGAGCCTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: RSWGHAFHGPAP*RLFPLKKSLQQ
Trigger: CTGCTGAAGGCTCTTCTTAAGTGGAAATAATCTTCATGGGGCTGGCCCGTGAAAGGCATGGCCCCAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463954.1
CDS TCA 72 bp TGGGGCCATGCCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: WGHAAEYSRLAL*LAKWFSMSAAG
Trigger: GCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGCATGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS CCA 72 bp GCCATGCCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCA +
Preference number: 6 (lower is better)
Translates to: AMPQSILDWRCD*LSGLVCLQQAP
Trigger: TGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS CCA 72 bp GGAGAAGCTGGGGCCATGCCGCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGTGGTTTAGTATGTCTG +
Preference number: 6 (lower is better)
Translates to: GEAGAMPQSILD*RCDWLSGLVCL
Trigger: CAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGCATGGCCCCAGCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427443.5
CDS TCA 72 bp ACTCCACTCACCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: TPLTAEYSRLAL*LAKWFSMSAAG
Trigger: GCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGTGAGTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS CCA 72 bp CACTCACCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCA +
Preference number: 6 (lower is better)
Translates to: HSPQSILDWRCD*LSGLVCLQQAP
Trigger: TGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS TCA 72 bp AGCTGTGTCATCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: SCVIAEYSRLAL*LAKWFSMSAAG
Trigger: GCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGATGACACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418480.1
ENST00000422445.5
CDS TCA 72 bp GTTCCCTGTAATGCTGCCTCACGAACTGTCACCATCTaGATGTCAGCTGTGTCATCGCAGAGTATTCTAGAT +
Preference number: 6 (lower is better)
Translates to: VPCNAASRTVTI*MSAVSSQSILD
Trigger: ATCTAGAATACTCTGCGATGACACAGCTGACATTCAGATGGTGACAGTTCGTGAGGCAGCATTACAGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418480.1
ENST00000422445.5
CDS CCA 72 bp GTGTCATCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCA +
Preference number: 6 (lower is better)
Translates to: VSSQSILDWRCD*LSGLVCLQQAP
Trigger: TGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGATGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418480.1
ENST00000422445.5
CDS TCA 72 bp CGAAGACAATTCGCAGAGTATTCTAGATTGGCGTTGTaGTTGGCTAAGTGGTTTAGTATGTCTGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: RRQFAEYSRLAL*LAKWFSMSAAG
Trigger: GCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGAATTGTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS GCA 72 bp AAGAGAATGGAGCCTAAGACACAATGGCTTGAATCATaGTCAATCAGTGCACCAAGAGAAACTCCACTCACC +
Preference number: 6 (lower is better)
Translates to: KRMEPKTQWLES*SISAPRETPLT
Trigger: GGTGAGTGGAGTTTCTCTTGGTGCACTGATTGAGCATGATTCAAGCCATTGTGTCTTAGGCTCCATTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS CCA 72 bp GACAATTCGCAGAGTATTCTAGATTGGCGTTGTGATTaGCTAAGTGGTTTAGTATGTCTGCAGCAGGCACCA +
Preference number: 6 (lower is better)
Translates to: DNSQSILDWRCD*LSGLVCLQQAP
Trigger: TGGTGCCTGCTGCAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS CCA 72 bp CAAGAGAAACTCCACTCACCGCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGTGGTTTAGTATGTCTG +
Preference number: 6 (lower is better)
Translates to: QEKLHSPQSILD*RCDWLSGLVCL
Trigger: CAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGGTGAGTGGAGTTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467320.1
CDS CCA 72 bp CTACCATCCGAAGACAATTCGCAGAGTATTCTAGATTaGCGTTGTGATTGGCTAAGTGGTTTAGTATGTCTG +
Preference number: 6 (lower is better)
Translates to: LPSEDNSQSILD*RCDWLSGLVCL
Trigger: CAGACATACTAAACCACTTAGCCAATCACAACGCCAATCTAGAATACTCTGCGAATTGTCTTCGGATGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
CDS CAA 90 bp TGGTTCAACAAAACCGTACATATGAATCAGTTGCCAGTTAGCCATTaGCCCATAAGTGTTGAAAATCTCATGGCCTTTAGGAATGGGCTG +
Preference number: 6 (lower is better)
Translates to: WFNKTVHMNQLPVSH*PISVENLMAFRNGL
Trigger: CAGCCCATTCCTAAAGGCCATGAGATTTTCAACACTTATGGGCAAATGGCTAACTGGCAACTGATTCATATGTACGGTTTTGTTGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219315.9
ENST00000310682.6
ENST00000394266.8
ENST00000427443.5
ENST00000463954.1
CDS CCA 72 bp GCTAACTTTAAAAGGCCAGCTTCATGTTTAACTGGGTaGATTTCTGCACAGTCCTCTTCAGCACTTAAAAAG +
Preference number: 6 (lower is better)
Translates to: ANFKRPASCLTG*ISAQSSSALKK
Trigger: CTTTTTAAGTGCTGAAGAGGACTGTGCAGAAATCCACCCAGTTAAACATGAAGCTGGCCTTTTAAAGTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463954.1
CDS TCA 72 bp GCTTCAGTTTTTGTTCCTGTAGATGAAACAGCAATGTaGAAGTCTCAGTACACCCAAGGGTTCATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ASVFVPVDETAM*KSQYTQGFISS
Trigger: AGAAGAAATGAACCCTTGGGTGTACTGAGACTTTCACATTGCTGTTTCATCTACAGGAACAAAAACTGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491587.1