RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000168137

Ensembl transcript IDs: ENST00000399686.6, ENST00000402198.7, ENST00000406341.5, ENST00000407969.5, ENST00000413704.5, ENST00000415650.5, ENST00000421188.1, ENST00000431285.5, ENST00000443339.5, ENST00000459941.1, ENST00000463180.5, ENST00000468208.2, ENST00000476740.2, ENST00000478961.6, ENST00000479538.1, ENST00000486465.5, ENST00000488236.5, ENST00000492939.5, ENST00000663774.1, ENST00000665872.1, ENST00000666307.1, ENST00000670063.1, ENST00000682236.1, ENST00000683012.1, ENST00000683262.1, ENST00000684055.1, ENST00000684606.1

Found 2779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTT +
Preference number: 1 (lower is better)
Translates to: SPMWERALPFGPPSR*FGGPWGCSLLLGVV
Trigger: AACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp GGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGC +
Preference number: 1 (lower is better)
Translates to: GTSVGNGVTAALPSS*RLAFALCRVTSPTS
Trigger: GCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp CTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCC +
Preference number: 1 (lower is better)
Translates to: LPFGPPSRCFGGPWG*SLLLGVVLLMWEPS
Trigger: GGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp AGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAA +
Preference number: 1 (lower is better)
Translates to: RALPFGPPSRCFGGP*GCSLLLGVVLLMWE
Trigger: TTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCT +
Preference number: 1 (lower is better)
Translates to: FSVMLLSHVGEGSPF*ATLTLLRRTLGMLP
Trigger: AGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp CCAAATCCAGAAGCCCTAGGAAAGTCCCGTCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACT +
Preference number: 1 (lower is better)
Translates to: PNPEALGKSRLSLDS*PLQWLESVLVHTPT
Trigger: AGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGACTTTCCTAGGGCTTCTGGATTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp AGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTGCAGACTTGCTTTTGCTCTGTGCAG +
Preference number: 1 (lower is better)
Translates to: RIPAHHGHQCRKRSY*CLAQLLQTCFCSVQ
Trigger: CTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp ATCCATTTCGACACTCCTCTTCTCCTGGGTGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: IHFDTPLLLGEMSQV*PAGDSLSLNWEGVV
Trigger: CACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAAGAGGAGTGTCGAAATGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp TGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCT +
Preference number: 1 (lower is better)
Translates to: CTPWAPVSETELLLP*PAPADLLLLCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAGACTTGCTTTTGCTCTGTGCAGAGT +
Preference number: 1 (lower is better)
Translates to: IPAHHGHQCRKRSYC*LAQLLQTCFCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp CCTGGTCTGAGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAGAAGTGGGTCCGAGGGAGGGATGAG +
Preference number: 1 (lower is better)
Translates to: PGLSFSRGSDVHLHF*LGNQSQKWVRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACTCAGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp TGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTT +
Preference number: 1 (lower is better)
Translates to: CRKRSYCCLAQLLQT*FCSVQSHLPHQQNF
Trigger: AAAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp CCCCCGTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTaGAAGGAAGCAGCTATGGGCTCATTCAGTTCTGTTTGCCCAAAT +
Preference number: 1 (lower is better)
Translates to: PPFLSNMLGLGSRGS*KEAAMGSFSSVCPN
Trigger: ATTTGGGCAAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAACGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp TCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAGGAGCCAGGTCAGAATGACCTGAGT +
Preference number: 1 (lower is better)
Translates to: SDVHLHFCLGNQSQK*VRGRDEEPGQNDLS
Trigger: ACTCAGGTCATTCTGACCTGGCTCCTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp AGGATGTCCTCTGAAGGGGGAGGAACTCTGCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTA +
Preference number: 1 (lower is better)
Translates to: RMSSEGGGTLLKEAL*FCPRTITLQELVAV
Trigger: TACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCCCTTCAGAGGACATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp AGAGGCAGCTGGAAGGAAGCAGCTATGGGCTCATTCAGTTCTGTTTaGCCAAATCCAGAAGCCCTAGGAAAGTCCCGTCTGAGTCTTGAC +
Preference number: 1 (lower is better)
Translates to: RGSWKEAAMGSFSSV*PNPEALGKSRLSLD
Trigger: GTCAAGACTCAGACGGGACTTTCCTAGGGCTTCTGGATTTGGGCAAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCCAGCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp GGTCCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCC +
Preference number: 1 (lower is better)
Translates to: GPIIMSGIHALLINC*TSLHRFRAAERGVS
Trigger: GGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR TCA 90 bp AAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCTGAACTGGTCCTGTACCGAGAAATT +
Preference number: 1 (lower is better)
Translates to: KAACDNSACCALACF*RFSLWAELVLYREI
Trigger: AATTTCTCGGTACAGGACCAGTTCAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp GGAGTAGGCATACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGG +
Preference number: 1 (lower is better)
Translates to: GVGIHQVELCPKCLV*VSHEGLMSISTSAW
Trigger: CCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTATGCCTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp CTGCTCATTCCCCTGCACTTGTCACAGTTGAGAAGGAAGCCATCCTaGGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCA +
Preference number: 1 (lower is better)
Translates to: LLIPLHLSQLRRKPS*ERPQGHQVGTVSPS
Trigger: TGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCAGGGGAATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp TCCAAAGCCAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCCAGCTGTAACTGCATTTGGGAACCA +
Preference number: 1 (lower is better)
Translates to: SKAKSLAALRIFRCF*TRVTLPSCNCIWEP
Trigger: TGGTTCCCAAATGCAGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp AGTGGTCCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTT +
Preference number: 1 (lower is better)
Translates to: SGPIIMSGIHALLIN*WTSLHRFRAAERGV
Trigger: AACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGGACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR CCA 90 bp AAAGATGTCCTCACTGCACAAGTGACTACGGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTT +
Preference number: 1 (lower is better)
Translates to: KDVLTAQVTTGYRQG*ETEASTQLIALRTV
Trigger: AACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGACATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp CTGGTAACATGTTTAGGGTCGTTGCCAGTACAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAACAGGGCACTCTTGCTTCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: LVTCLGSLPVQLDPL*YVKGTQQGTLASLL
Trigger: AAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCACAACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp AGTGGTCCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGATTCAGGGCTCACTCAAGAAGTGGC +
Preference number: 1 (lower is better)
Translates to: SGPIIMSGIHALLIN*WTSLHRFRAHSRSG
Trigger: GCCACTTCTTGAGTGAGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGGACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR CCA 90 bp GGTCCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTCAGGGCTCACTCAAGAAGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: GPIIMSGIHALLINC*TSLHRFRAHSRSGC
Trigger: ACAGCCACTTCTTGAGTGAGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR TCA 90 bp CATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGGAGTAGGATGGTAACAGTTGGAGGC +
Preference number: 1 (lower is better)
Translates to: HSSFSCLLTSWVTEL*NSLGRGSRMVTVGG
Trigger: GCCTCCAACTGTTACCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR TCA 90 bp GCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACTGGACCTaGACATATTCAAAACACCAGGATTTTTCCAGCCCAGACCCTAAT +
Preference number: 1 (lower is better)
Translates to: AHSRSGCGIKSLNWT*TYSKHQDFSSPDPN
Trigger: ATTAGGGTCTGGGCTGGAAAAATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR TCA 90 bp CCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACTGGACCTaGACATATTCAAAACACCAGGATTTTTCCAGCCCAGACCCTAAT +
Preference number: 1 (lower is better)
Translates to: PHSRSGCGIKSLNWT*TYSKHQDFSSPDPN
Trigger: ATTAGGGTCTGGGCTGGAAAAATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000468208.2
ENST00000666307.1
3UTR TCA 90 bp CTAAGGAATCATCTGCACTTGTCACAGTTGAGAAGGAAGCCATCCTaGGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCA +
Preference number: 1 (lower is better)
Translates to: LRNHLHLSQLRRKPS*ERPQGHQVGTVSPS
Trigger: TGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCAGATGATTCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663774.1
3UTR GCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTCCGTCGTGCTTTTCTACGTCTAGTC +
Preference number: 1 (lower is better)
Translates to: SCDCWSLFSSEASFC*SISSSFRRAFLRLV
Trigger: GACTAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp GATGGGGACTGGAGTAGAAGAAACTTTGAGCCAGTGGTGATGATATaGTGTGGCAGAAGAGAGGTTGGTCTTGATTTTCTTCGTCTTTGG +
Preference number: 1 (lower is better)
Translates to: DGDWSRRNFEPVVMI*CGRREVGLDFLRLW
Trigger: CCAAAGACGAAGAAAATCAAGACCAACCTCTCTTCTGCCACACCATATCATCACCACTGGCTCAAAGTTTCTTCTACTCCAGTCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR GCA 90 bp ACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCTTTCCGTCGTGCTTTTCTACGTCTA +
Preference number: 1 (lower is better)
Translates to: TSCDCWSLFSSEASF*CSISSSFRRAFLRL
Trigger: TAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp AAGAGAAACAGGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCTGAACTGGACCTGAACATATTCAAA +
Preference number: 1 (lower is better)
Translates to: KRNRGIRATPTSLKK*LWDQESELDLNIFK
Trigger: TTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCCTGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR TCA 90 bp AGATTCAGGGGCTTCAGTTTTTGTCTCTTCACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCAA +
Preference number: 1 (lower is better)
Translates to: RFRGFSFCLFTNRSL*GGCSNLYIRVALFQ
Trigger: TTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp CAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAGCTTTCTCCAAGGCCAGAGGCCAAT +
Preference number: 1 (lower is better)
Translates to: QQCTLDSREKLLYSL*FRQDLQLSPRPEAN
Trigger: ATTGGCCTCTGGCCTTGGAGAAAGCTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 90 bp GCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTTAAGACAAAGATAAACAGTATTCTT +
Preference number: 1 (lower is better)
Translates to: ARHPPVGAGSKLYYP*LFLGDLKTKINSIL
Trigger: AAGAATACTGTTTATCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR GCA 90 bp GTTGGATCCGTTGTGATACGTAAAGGGCACTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTT +
Preference number: 1 (lower is better)
Translates to: VGSVVIRKGHSTGHS*FSALSFNHSVTRYF
Trigger: AAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCACAACGGATCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 90 bp GAATGTAGGTGTTGTTCAAGCGCGTTCTGTACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCATACTGGTCAGTCCATAGTCTTATC +
Preference number: 1 (lower is better)
Translates to: ECRCCSSAFCTSALY*LVKASSYWSVHSLI
Trigger: GATAAGACTATGGACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTTGAACAACACCTACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp CTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCACTaGATACAGTTACTTTTTCTGGAACTTCTTGTGATTGCTGGTCAT +
Preference number: 1 (lower is better)
Translates to: LLLVFLLDCLLPHDH*IQLLFLELLVIAGH
Trigger: ATGACCAGCAATCACAAGAAGTTCCAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 90 bp CTGGTCATCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATGATCACTGGATACAGTTACTTTTTC +
Preference number: 1 (lower is better)
Translates to: LVIYNLFFLFFWFFF*IVYFLMITGYSYFF
Trigger: GAAAAAGTAACTGTATCCAGTGATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGATGACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCACGTGCCAGGCAGGGTaGGGGCCGCCTGCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSTCQAG*GPPARW
Trigger: CCAGCGGGCAGGCGGCCCTCACCCTGCCTGGCACGT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp GAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTaGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGA +
Preference number: 2 (lower is better)
Translates to: EGSPFWATLTLLRRT*GMLPPSRSRSTDVG
Trigger: TCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATACGTGCCAGGCAGGGTaGGGGCCGCCTGCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNTCQAG*GPPARW
Trigger: CCAGCGGGCAGGCGGCCCTCACCCTGCCTGGCACGT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: GLSLLGHPHAASEDLGDALPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: RSSTGDGRPFRSERGMIVGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...GACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443339.5
3UTR-3UTR GCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 2 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 2 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAADPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp TTTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCC +
Preference number: 2 (lower is better)
Translates to: FLCDVTLPCGRGLSL*GHPHAASEDLGDAP
Trigger: GGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAALVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGCAGTCACAAGTGCATaGTCCCCAATCATGGAGGCG +
Preference number: 2 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRAVTSA*SPIMEA
Trigger: CGCCTCCATGATTGGGGAGCATGCACTTGTGACTGC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLREGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp CTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACC +
Preference number: 2 (lower is better)
Translates to: LHTMGTSVGNGVTAA*PSSCRLAFALCRVT
Trigger: GGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCACAGGCACAATGCACTaGTGGGGAGAAGCCGGTCTG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSTGTMH*WGEAGL
Trigger: CAGACCGGCTTCTCCCCATCAGTGCATTGTGCCTGT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR TCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: GLSLLGHPHAASEDLGDALLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 2 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 2 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 2 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCATGCTCCCCAATCATaGAGGCGGTCCTGCTCATGG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSHAPQS*RRSCSW
Trigger: CCATGAGCAGGACCGCCTCCATGATTGGGGAGCATG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCTAGAGAAGCCACTCTaGGCTGGTTTAGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: GLSLLGHPHAASEDLGDALEKPL*AGLDSE
Trigger: TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAG...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR-3UTR CCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: PPSSKAACDNSACCALACSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: PPSSKAACDNSACCALACPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 2 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLADDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGGGTCAGAACGAGGGATaGTCGTCTGGACAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: WKEKAPHPSFLLHCYPHLGQNEG*SSGQGE
Trigger: CTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACC...CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
3UTR-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 2 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: AELVLYREIRLFGRGLEGLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 2 (lower is better)
Translates to: PPSSKAACDNSACCALACLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGACACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 2 (lower is better)
Translates to: AELVLYREIRLFGRGLEGAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 2 (lower is better)
Translates to: EDPCTPWAPVSETELLLPLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 2 (lower is better)
Translates to: PPSSKAACDNSACCALACNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: PADLLLLCAESPPPPAEFEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp GGTCTGAGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAGTGGGTCCGAGGGAGGGATGAGGAG +
Preference number: 2 (lower is better)
Translates to: GLSFSRGSDVHLHFC*GNQSQKWVRGRDEE
Trigger: CTCCTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACTCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp GTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTT +
Preference number: 2 (lower is better)
Translates to: VSETELLLPCPAPAD*LLLCAESPPPPAEF
Trigger: AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 2 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: PALLTGAECAIRQKGPSTVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 2 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGACTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 2 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCGCCTGGGATGGGGACTaGAGTAGAAGAAACTTTGAG +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCAWDGD*SRRNFE
Trigger: CTCAAAGTTTCTTCTACTCCAGTCCCCATCCCAGGC...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR-3UTR TCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: PALLTGAECAIRQKGPSTARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: VEGESSSSQLSVALLSPPSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTATGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: VEGESSSSQLSVALLSPPLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 2 (lower is better)
Translates to: PALLTGAECAIRQKGPSTTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWELLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 2 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGATCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: PALLTGAECAIRQKGPSTSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 2 (lower is better)
Translates to: EDPCTPWAPVSETELLLPVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 2 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACAAGTGCCTTCTGCACTaGCCCAGGGACCAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHKCLLH*PRDQAL
Trigger: GAGGGCCTGGTCCCTGGGGCAGTGCAGAAGGCACTT...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR-3UTR CCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWESTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCACTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 2 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 2 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 2 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 2 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 2 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: RSSTGDGRPFRSERGMIVLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...GACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
3UTR-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR CAA 90 bp GAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTCCTTA +
Preference number: 2 (lower is better)
Translates to: ETELLLPCPAPADLL*LCAESPPPPAEFSL
Trigger: TAAGGAAAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 2 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 2 (lower is better)
Translates to: PHAASEDLGDAPSFSESFFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCAGACATTTGCAGTGAGTaGGATGATCAAAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GRPFRSERGMIVWTGGEADICSE*DDQSAF
Trigger: GAAGGCACTTTGATCATCTCACTCACTGCAAATGTC...TGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431285.5
3UTR-3UTR GCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 2 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 2 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLASLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: EPGVASWGLFEPELGGGGGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGGGCCGCCTGCCCGCTaGCCTCTCCCCTTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSGPPAR*PLPLVK
Trigger: TTTAACCAAGGGGAGAGGCCAGCGGGCAGGCGGCCC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 2 (lower is better)
Translates to: PADLLLLCAESPPPPAEFAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 2 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: VAPLESAELNVSGPSPSAPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 2 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCTCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 2 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLASEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 2 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWEDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGCATCCCAGGCAACATaGTTTCCACTCCCAATGCTC +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDASQAT*FPLPML
Trigger: GAGCATTGGGAGTGGAAATCATGTTGCCTGGGATGC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR TCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 2 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PHPSFLLHCYPHLICCPAALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 2 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWEGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTAGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 2 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 2 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: TILPAVHWPASDALVFGLGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 2 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 2 (lower is better)
Translates to: TILPAVHWPASDALVFGLTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 2 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGCAGTCACAAGTGCATaGTCCCCAATCATGGAGGCG +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNAVTSA*SPIMEA
Trigger: CGCCTCCATGATTGGGGAGCATGCACTTGTGACTGC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGA +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDPCSHK*MLPNHG
Trigger: TCCATGATTGGGGAGCATGCACTTGTGACTGCAGGG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGAGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 2 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: EDPCTPWAPVSETELLLPSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 2 (lower is better)
Translates to: VAPLESAELNVSGPSPSALAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 2 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCAGGAGGTGTGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: IQVRTRDDRLDRGRSRRCALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...ACACCTCCTGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
3UTR-3UTR GCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: PADLLLLCAESPPPPAEFLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 2 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGGGATCCCTCTCGAAATaGCTGGGATGGGGACTGGAG +
Preference number: 2 (lower is better)
Translates to: NRASLPKVRASTHISTPLGSLSK*LGWGLE
Trigger: CTCCAGTCCCCATCCCAGGCATTTCGAGAGGGATCC...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR-3UTR CCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: PPSSKAACDNSACCALACGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 2 (lower is better)
Translates to: TILPAVHWPASDALVFGLHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGATGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 2 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 2 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 2 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTCTCTGCTCCAATGGTaGGTAGGCTTGGAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSSLLQW*VGLEEV
Trigger: CACCTCCTCCAAGCCTACCCACCATTGGAGCAGAGA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 2 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 2 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 2 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGCCTCAGCATCCTTGGTaGTGGCAGACACAGCATAGA +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWPQHPW*WQTQHR
Trigger: TCTATGCTGTGTCTGCCATCACCAAGGATGCTGAGG...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGA +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNPCSHK*MLPNHG
Trigger: TCCATGATTGGGGAGCATGCACTTGTGACTGCAGGG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQASLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 2 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 2 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 2 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACTATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAATGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGCTGGAGTCAGGGAAGTaGAAAAGGGGCAACTTCGTC +
Preference number: 2 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGLESGK*KRGNFV
Trigger: GACGAAGTTGCCCCTTTTGCACTTCCCTGACTCCAG...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443339.5
3UTR-3UTR GCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 2 (lower is better)
Translates to: PALLTGAECAIRQKGPSTPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 2 (lower is better)
Translates to: EDPCTPWAPVSETELLLPPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 2 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSDKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 2 (lower is better)
Translates to: VAPLESAELNVSGPSPSAHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 2 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTATCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 2 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 2 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYDPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 2 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 2 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 2 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGACTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 2 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 2 (lower is better)
Translates to: VAPLESAELNVSGPSPSALRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGACTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: SHEGLMSISTSAWETSLRLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTATCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 2 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 2 (lower is better)
Translates to: VLHDPFLDSFSASWVWFFCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...GAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 2 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 2 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGACATTTGCAGTGAGTaGGATGATCAAAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWDICSE*DDQSAF
Trigger: GAAGGCACTTTGATCATCTCACTCACTGCAAATGTC...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR-3UTR TCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTCCTCTCGAAATGCCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: VEGESSSSQLSVALLSPPPLEMP*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGG...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGA +
Preference number: 2 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEPCSHK*MLPNHG
Trigger: TCCATGATTGGGGAGCATGCACTTGTGACTGCAGGG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 2 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 2 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ACCAGGCCCTCTTCCATTCACTACCAAGACAGGATACCCTCACTCAAGAAGTGGCTAGAGAAGCCACTCTaGGCTGGTTTAGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: TRPSSIHYQDRIPSLKKWLEKPL*AGLDSE
Trigger: TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAG...CCACTTCTTGAGTGAGGGTATCCTGTCTTGGTAGTGAATGGAAGAGGGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR-3UTR CCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 2 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 2 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 2 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 2 (lower is better)
Translates to: PADLLLLCAESPPPPAEFCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGACTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp CGGGCTACAGGCAAGGATGGGAGACGGAGGCTTCAACACAACTCATaGCACTTAGAACCGTTACTAACCGAAACACCATTTGCTTGTCAA +
Preference number: 2 (lower is better)
Translates to: RATGKDGRRRLQHNS*HLEPLLTETPFACQ
Trigger: TTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp AGAGCTGACCATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: RADHELFFKEPGTLQ*VQVPSFTILAYFLV
Trigger: CACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCATGGTCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: PIIMSGIHALLINCWTSLLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGGAGGGGCTCCGTAATTATGATCAGCATAAGGCAGTCCTCGACACCCATGCCTAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 2 (lower is better)
Translates to: RRGSVIMISIRQSSTPMPSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...AGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
3UTR-3UTR TCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTATCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: FGVHDLLMNRASLPKVRACSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 2 (lower is better)
Translates to: TILPAVHWPASDALVFGLSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 2 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 2 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGDKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACATGCTCCCCAATCATaGAGGCGGTCCTGCTCATGG +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPHAPQS*RRSCSW
Trigger: CCATGAGCAGGACCGCCTCCATGATTGGGGAGCATG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 2 (lower is better)
Translates to: SCDCWSLFSSEASFCCSILPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAACCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCAATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 2 (lower is better)
Translates to: VAPLESAELNVSGPSPSAMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: VAPLESAELNVSGPSPSALKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 2 (lower is better)
Translates to: EGESSSSQLSVALLSPPDLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGACTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 2 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: KRVLYICTVLISESFFILLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: NRASLPKVRASTHISTPLMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 2 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 2 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 2 (lower is better)
Translates to: SSPTGVSEVVVVISTSELSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 2 (lower is better)
Translates to: SHEGLMSISTSAWETSLRIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 2 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: PIIMSGIHALLINCWTSLLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAATGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: DFHFFNGLNKSALSLQILGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 2 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 2 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTACGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 2 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 2 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 2 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 2 (lower is better)
Translates to: SCDCWSLFSSEASFCCSISCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGAGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 2 (lower is better)
Translates to: IMSGIHALLINCWTSLHRAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 2 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 2 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTATCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 2 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTAACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp ACTCCCAGCAACCAAACCCAAATCACCTCAAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTAAGAGATGTGACTGGTGAAAACATG +
Preference number: 2 (lower is better)
Translates to: TPSNQTQITSNCRGV*QRLAVVRDVTGENM
Trigger: CATGTTTTCACCAGTCACATCTCTTACTACTGCTAGTCGCTGCAACACTCCTCTACAGTTTGAGGTGATTTGGGTTTGGTTGCTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443339.5
3UTR-3UTR TCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 2 (lower is better)
Translates to: VEGESSSSQLSVALLSPPMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: SCDCWSLFSSEASFCCSILLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACAGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 2 (lower is better)
Translates to: VHDLLMNRASLPKVRASTAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...TGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 2 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 2 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQANRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 2 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 2 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TILPAVHWPASDALVFGLSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: SSPTGVSEVVVVISTSELLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 2 (lower is better)
Translates to: VHDLLMNRASLPKVRASTPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 2 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 2 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 2 (lower is better)
Translates to: NRASLPKVRASTHISTPLCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: PIIMSGIHALLINCWTSLIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACACTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp CACTTATTAATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTaGCTTTGCTTTGCTGAAGGGGGAAGAATCCCCAGGGACTGTGAA +
Preference number: 2 (lower is better)
Translates to: HLLIRDVIQPRNLVQ*LCFAEGGRIPRDCE
Trigger: TTCACAGTCCCTGGGGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGATTAATAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACATCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATATCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIISSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGACTCAGAGACTTTTCTTaGCCAACCAATCTAGAGTGG +
Preference number: 2 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRLRDFS*PTNLEW
Trigger: CCACTCTAGATTGGTTGGTCAAGAAAAGTCTCTGAG...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
3UTR-3UTR TCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 2 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMILCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 2 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKALRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 2 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 2 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAACTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 2 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 2 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCATTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 2 (lower is better)
Translates to: CGVLGMVTFETELLTSDSFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATTCCCACTCTTACCCTaGAGTCACAAGTGCATGCTC +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPFPLLP*SHKCML
Trigger: GAGCATGCACTTGTGACTGCAGGGTAAGAGTGGGAA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGTACAACAGGCACAATaGACTGATGGGGAGAAGCCG +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFVQQAQ*TDGEKP
Trigger: CGGCTTCTCCCCATCAGTGCATTGTGCCTGTTGTAC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAACATCGTCCCAGGACTaGCTCCTTGTCACTGAAGTC +
Preference number: 2 (lower is better)
Translates to: SPIHLLHLNQAFSTTESATSSQD*LLVTEV
Trigger: GACTTCAGTGACAAGGAGGCAGTCCTGGGACGATGT...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
3UTR-3UTR GCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SCDCWSLFSSEASFCCSISLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTATGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: FSPELSRLPASVGVTKLLCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 2 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 2 (lower is better)
Translates to: HDLLMNRASLPKVRASTHLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 2 (lower is better)
Translates to: VTILPAVHWPASDALVFGILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 2 (lower is better)
Translates to: KRVLYICTVLISESFFILSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAGGCGGTCCTGCTCATaGGATCATCAACTCCTGATT +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPRRSCS*DHQLLI
Trigger: AATCAGGAGTTGATGATCCCATGAGCAGGACCGCCT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 2 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 2 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 2 (lower is better)
Translates to: PIIMSGIHALLINCWTSLTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCGGGCTAGACGTCCGCTaGAGTCAGGGAAGTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIGLDVR*SQGSAK
Trigger: TTTTGCACTTCCCTGACTCCAGCGGACGTCTAGCCC...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443339.5
3UTR-3UTR CCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACATGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 2 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 2 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: TLPSCNCIWEPITVLLQASTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 2 (lower is better)
Translates to: CGVLGMVTFETELLTSDSTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 2 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 2 (lower is better)
Translates to: TLPSCNCIWEPITVLLQAVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 2 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 2 (lower is better)
Translates to: EGESSSSQLSVALLSPPDKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: APSSWCRFQALLSLPISWSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 2 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMILPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: SHEGLMSISTSAWETSLRKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: FGVHDLLMNRASLPKVRASLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 2 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKASVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAATTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAATTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 2 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTAGGCGGTCCTGCTCATaGGATCATCAACTCCTGATT +
Preference number: 2 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFRRSCS*DHQLLI
Trigger: AATCAGGAGTTGATGATCCCATGAGCAGGACCGCCT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 2 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 2 (lower is better)
Translates to: TLPSCNCIWEPITVLLQASECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGAATGCCAAGGTCAACTaGGACATAAAAACAAGAACA +
Preference number: 2 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWNAKVN*DIKTRT
Trigger: TGTTCTTGTTTTTATGTCCCAGTTGACCTTGGCATT...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443339.5
3UTR-3UTR CCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACACTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 2 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp GTGATACGTAAAGGGCACTCAACAGGGCACTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTAACTAGATACTTTTTGGTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: VIRKGHSTGHSCFSA*SFNHSVTRYFLVLG
Trigger: CCCCAAAACCAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 2 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTATTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 2 (lower is better)
Translates to: FSPELSRLPASVGVTKLLFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATTTATAGAAAGAGTTTaGCGACTCCTGCTCTACATG +
Preference number: 2 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRFIERV*RLLLYM
Trigger: CATGTAGAGCAGGAGTCGGCAAACTCTTTCTATAAA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
3UTR-3UTR GCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 2 (lower is better)
Translates to: CGVLGMVTFETELLTSDSSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: LHLGTNNCVITGQFSLINGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 2 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 2 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAGGCGGTCCTGCTCATaGGATCATCAACTCCTGATT +
Preference number: 2 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWRRSCS*DHQLLI
Trigger: AATCAGGAGTTGATGATCCCATGAGCAGGACCGCCT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 2 (lower is better)
Translates to: DFHFFNGLNKSALSLQILAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 2 (lower is better)
Translates to: CGVLGMVTFETELLTSDSSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 2 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 2 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 2 (lower is better)
Translates to: EPLLTETPFACQQCTLDSNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: KRVLYICTVLISESFFILHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 2 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 2 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 2 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIIPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 2 (lower is better)
Translates to: VLYICTVLISESFFILVSSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp ACCCTCCTTTCTCCTTTTTATATGGGAATAAGCCCAAACACTGCTTTTCATTTTATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: TLLSPFYMGISPNTAFHFIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...AAAATGAAAAGCAGTGTTTGGGCTTATTCCCATATAAAAAGGAGAAAGGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 2 (lower is better)
Translates to: VQVPSFTILAYFLVILRQLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: TGVSEVVVVISTSELLCSLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 2 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCATGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 2 (lower is better)
Translates to: CGVLGMVTFETELLTSDSWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 2 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AACCACTTATTAATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTTGCTTGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 2 (lower is better)
Translates to: NHLLIRDVIQPRNLVQLLVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...AAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGATTAATAAGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR-3UTR TCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 2 (lower is better)
Translates to: LHLGTNNCVITGQFSLINCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 2 (lower is better)
Translates to: CFRGRILDFLRLWCCTTLKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...AAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665872.1
3UTR-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTACAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 2 (lower is better)
Translates to: DFHFFNGLNKSALSLQILQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 2 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTATCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 2 (lower is better)
Translates to: DFHFFNGLNKSALSLQILSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: FGVHDLLMNRASLPKVRASHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 2 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: SSPTGVSEVVVVISTSELTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTATGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 2 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 2 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCAAGAGAGGTTGGTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSKRGWS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGACCAACCTCTCTT...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR-3UTR GCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 2 (lower is better)
Translates to: DFHFFNGLNKSALSLQILALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: VLYICTVLISESFFILVSSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAGGATCCCTCTCGAAATaGCTTGATTTTCTTCGTCTT +
Preference number: 2 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIIGSLSK*LDFLRL
Trigger: AAGACGAAGAAAATCAAGGCATTTCGAGAGGGATCC...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 2 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR CAA 90 bp GTCTTATTAATAGTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGTTCAAGCGCGTTCTGTACATCTGCA +
Preference number: 2 (lower is better)
Translates to: VLLIVSKIVGLPTNS*LECRCCSSAFCTSA
Trigger: TGCAGATGTACAGAACGCGCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACACTATTAATAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 90 bp TTACAGGCCAATTCAGTCTTATTAATAGTGTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGCG +
Preference number: 2 (lower is better)
Translates to: LQANSVLLIVSKIVG*PTNSLLECRCCSSA
Trigger: CGCGCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACACTATTAATAAGACTGAATTGGCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 2 (lower is better)
Translates to: VQVPSFTILAYFLVILRQMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 2 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 2 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR GCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 2 (lower is better)
Translates to: KRVLYICTVLISESFFILKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 2 (lower is better)
Translates to: LHLGTNNCVITGQFSLINSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 2 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 2 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR TCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATCAGAGGGAGAATTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: LHLGTNNCVITGQFSLINQRENS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTG...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
3UTR-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 2 (lower is better)
Translates to: VQVPSFTILAYFLVILRQLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 2 (lower is better)
Translates to: FSPELSRLPASVGVTKLLILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 2 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 2 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 2 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR GCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 3 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGG +
Preference number: 3 (lower is better)
Translates to: GPPSRCFGGPWG*SLLLGVVLLMW
Trigger: CCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 3 (lower is better)
Translates to: EPGVASWGLFEPELGGGGGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp CCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTCGGAGTCGTTCTACTG +
Preference number: 3 (lower is better)
Translates to: PFGPPSRCFGGP*GCSLLLGVVLL
Trigger: CAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp TGGCTGGCTGCTAAAATACCCTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGACACAGGGTGGGCGGG +
Preference number: 3 (lower is better)
Translates to: WLAAKIPWCPRK*GQRVCGHRVGG
Trigger: CCCGCCCACCCTGTGTCCACAGACTCGTTGGCCCCATTTACGGGGACACCAGGGTATTTTAGCAGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 3 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 3 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp GTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATACCCTGGAGGCCTGGTA +
Preference number: 3 (lower is better)
Translates to: VHTPTPTVWVVL*IGNRRYPGGLV
Trigger: TACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 3 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 3 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: PHAASEDLGDAPSFSESFKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGACTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 3 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp GAAGCCCTAGGAAAGTCCCGTCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAGTCGGTACTGGTGCAC +
Preference number: 3 (lower is better)
Translates to: EALGKSRLSLDS*PLQWLESVLVH
Trigger: GTGCACCAGTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGACTTTCCTAGGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp GCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTGCAGACTTGCTTTTGC +
Preference number: 3 (lower is better)
Translates to: AHHGHQCRKRSY*CLAQLLQTCFC
Trigger: GCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp GAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCACTAGAAGGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: ETESEVGESEGP*RVGLAALEGQL
Trigger: GAGCTGCCCTTCTAGTGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp GAAGATGGAGTTCGGGCTGAGGATCCCTGCACACCATaGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: EDGVRAEDPCTP*APVSETELLLP
Trigger: AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTGACTGCCCAGCACTGG +
Preference number: 3 (lower is better)
Translates to: VGSAVNWKPQIP*RPGRQLTAQHW
Trigger: CCAGTGCTGGGCAGTCAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 3 (lower is better)
Translates to: EPGVASWGLFEPELGGGGHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 3 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGACATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 3 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGATTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 3 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp TACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTCCCCCACCAGCAGAAT +
Preference number: 3 (lower is better)
Translates to: YCCLAQLLQTCF*SVQSHLPHQQN
Trigger: ATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp TGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTGCTTTTGCTCTGTGCA +
Preference number: 3 (lower is better)
Translates to: WAPVSETELLLP*PAPADLLLLCA
Trigger: TGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 3 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 3 (lower is better)
Translates to: PHAASEDLGDAPSFSESFLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 3 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 3 (lower is better)
Translates to: PALLTGAECAIRQKGPSTRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 3 (lower is better)
Translates to: EDPCTPWAPVSETELLLPRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATGTGGCAGAAGAGAGGTaGGTCTTGATTTTCTTCGTC +
Preference number: 3 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNVAEER*VLIFFV
Trigger: GACGAAGAAAATCAAGACCAACCTCTCTTCTGCCAC...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR TCA 72 bp GGCCTTCTCCATCTGCAGGGTCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGGGAGAGGGCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: GLLHLQGLSLSL*CYSPMWERALP
Trigger: AGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGACCCTGCAGATGGAGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp CTATCTTCCCACTCTTACCCTGCAGTCACAAGTGCATaGTCCCCAATCATGGAGGCGGTCCTGCTCATGGGA +
Preference number: 3 (lower is better)
Translates to: LSSHSYPAVTSA*SPIMEAVLLMG
Trigger: TCCCATGAGCAGGACCGCCTCCATGATTGGGGAGCATGCACTTGTGACTGCAGGGTAAGAGTGGGAAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR CCA 72 bp CTTACCCTGCAGTCACAAGTGCATGCTCCCCAATCATaGAGGCGGTCCTGCTCATGGGATCATCAACTCCTG +
Preference number: 3 (lower is better)
Translates to: LTLQSQVHAPQS*RRSCSWDHQLL
Trigger: CAGGAGTTGATGATCCCATGAGCAGGACCGCCTCCATGATTGGGGAGCATGCACTTGTGACTGCAGGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR CCA 72 bp TGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGG +
Preference number: 3 (lower is better)
Translates to: WPASDALVFGLN*SCTEKFDSSAG
Trigger: CCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp CATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAGGAGCCAGGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: HLHFCLGNQSQK*VRGRDEEPGQN
Trigger: ATTCTGACCTGGCTCCTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp GGTAGGGCTAGCAGCACTAGAAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCTGTTTCCAGAATGTGG +
Preference number: 3 (lower is better)
Translates to: GRASSTRRAAPP*KIAASAVSRMW
Trigger: CCACATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCTTCTAGTGCTGCTAGCCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: PPSSKAACDNSACCALACQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: EPGVASWGLFEPELGGGGQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 3 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 3 (lower is better)
Translates to: VTILPAVHWPASDALVFGGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: RGIRATPTSLKKWLWDQELPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...CTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR-3UTR CAA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 3 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 3 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTCCCTCTCGAAATGCCTaGATTTTCTTCGTCTTTGGT +
Preference number: 3 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAPSRNA*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGGG...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
3UTR TCA 72 bp TCTGAAGGGGGAGGAACTCTGCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATCACACTGCAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: SEGGGTLLKEAL*FCPRTITLQEL
Trigger: CAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCCCTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 3 (lower is better)
Translates to: PHAASEDLGDAPSFSESFTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 3 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 3 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: TILPAVHWPASDALVFGLPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCAGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 3 (lower is better)
Translates to: VAPLESAELNVSGPSPSAGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 3 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 3 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp CTAAGGCTTGTTTTATCCAGCGCTTCTTACAGGAGCTaGATGTGCCATCAGGCAGAAGGGGCCTTCGACGTC +
Preference number: 3 (lower is better)
Translates to: LRLVLSSASYRS*MCHQAEGAFDV
Trigger: GACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGGATAAAACAAGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp CTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCTACTGCTGATATTCTC +
Preference number: 3 (lower is better)
Translates to: LGDAPSFSESFY*CGNHPPTADIL
Trigger: GAGAATATCAGCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp AAACCTATCTTCCCACTCTTACCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGAGGCGGTCCTGCTCAT +
Preference number: 3 (lower is better)
Translates to: KPIFPLLPCSHK*MLPNHGGGPAH
Trigger: ATGAGCAGGACCGCCTCCATGATTGGGGAGCATGCACTTGTGACTGCAGGGTAAGAGTGGGAAGATAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR CCA 72 bp CTCACTGCACAAGTGACTACGGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACACAACTCATTGCACTT +
Preference number: 3 (lower is better)
Translates to: LTAQVTTGYRQG*ETEASTQLIAL
Trigger: AAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp CCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: PRQLVTILPAVH*PASDALVFGLN
Trigger: GTTCAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp GGAAGATTGCTGCCAGTGCTGTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGTGTCCCCGTAAATGGG +
Preference number: 3 (lower is better)
Translates to: GRLLPVLFPECG*LLKYPGVPVNG
Trigger: CCCATTTACGGGGACACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGCAGCAATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 3 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 3 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 3 (lower is better)
Translates to: PALLTGAECAIRQKGPSTFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 3 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 3 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 3 (lower is better)
Translates to: NRASLPKVRASTHISTPLLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 3 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 3 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 3 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGATTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 3 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 3 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp TGTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCTGAACTGGTCCTGTAC +
Preference number: 3 (lower is better)
Translates to: CDNSACCALACF*RFSLWAELVLY
Trigger: GTACAGGACCAGTTCAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp TGTGTAGGATGTCCTCTGAAGGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCTGTCCGAGGACTATCA +
Preference number: 3 (lower is better)
Translates to: CVGCPLKGEELC*RRLCDSVRGLS
Trigger: TGATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCCCTTCAGAGGACATCCTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp TCCAGGTCTCAGTGCAGTAGTTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCCTCTGAAGGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: SRSQCSSSITVS*RLCRMSSEGGG
Trigger: TCCTCCCCCTTCAGAGGACATCCTACACAGTCTCCAGGATACAGTTATCGAACTACTGCACTGAGACCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 3 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 3 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 3 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 3 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 3 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 3 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 3 (lower is better)
Translates to: EDPCTPWAPVSETELLLPSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 3 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp TGTTTAGGGTCGTTGCCAGTACAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAACAGGGCACTCTTGCT +
Preference number: 3 (lower is better)
Translates to: CLGSLPVQLDPL*YVKGTQQGTLA
Trigger: AGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCACAACGGATCCAACTGTACTGGCAACGACCCTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp TCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTTaGTTTGCTTTGCTGAAGGGGGAAGAATCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: SGMSFNPEIWYS*FALLKGEESPG
Trigger: CCCTGGGGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR CCA 72 bp GAGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGGAATACACGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: EHKAVLDTHASE*SHNYEWNTRSS
Trigger: AGAAGAGCGTGTATTCCACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443339.5
3UTR CCA 72 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTCAGGGCAGCTGAGCGG +
Preference number: 3 (lower is better)
Translates to: IMSGIHALLINC*TSLHRFRAAER
Trigger: CCGCTCAGCTGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR CCA 72 bp CAGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGGAATACACGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: QHKAVLDTHASE*SHNYEWNTRSS
Trigger: AGAAGAGCGTGTATTCCACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431285.5
3UTR-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 3 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp TGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 3 (lower is better)
Translates to: CFRGRILDFLRLWCCTTLSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...AAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
3UTR-3UTR CAA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 3 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 3 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 3 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCSEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665872.1
3UTR-3UTR CAA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: PADLLLLCAESPPPPAEFLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 3 (lower is better)
Translates to: HDLLMNRASLPKVRASTHDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp AAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCCAGCTGTAACTGCATT +
Preference number: 3 (lower is better)
Translates to: KSLAALRIFRCF*TRVTLPSCNCI
Trigger: AATGCAGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp CAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTaGGCTGGTTTAGACTCAGAACTATTCTTCTTAATT +
Preference number: 3 (lower is better)
Translates to: QLSGEFPLEKPL*AGLDSELFFLI
Trigger: AATTAAGAAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 3 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 3 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 3 (lower is better)
Translates to: PADLLLLCAESPPPPAEFTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 3 (lower is better)
Translates to: EPLLTETPFACQQCTLDSSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACATTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: TILPAVHWPASDALVFGLQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: SCDCWSLFSSEASFCCSIHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 3 (lower is better)
Translates to: KRVLYICTVLISESFFILHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 3 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 3 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTERWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 3 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: EPLLTETPFACQQCTLDSLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 3 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCCCAGGACTGCCTCCTaGTCACTGAAGTCTCAGTTT +
Preference number: 3 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLPRTAS*SLKSQF
Trigger: AAACTGAGACTTCAGTGACAAGGAGGCAGTCCTGGG...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
3UTR-3UTR CAA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: SSPTGVSEVVVVISTSELQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 3 (lower is better)
Translates to: TILPAVHWPASDALVFGLTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 3 (lower is better)
Translates to: NRASLPKVRASTHISTPLLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 3 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 3 (lower is better)
Translates to: VTILPAVHWPASDALVFGLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGACAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 3 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: SSPTGVSEVVVVISTSELHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 3 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CTGGAATTAGTCCTAGACTCCCCAGCAGTATTTACGGGCAGTCATGTCTATACTTACAGTTGCTTTGCTTaGCTGAAGGGGGAAGAATCC +
Preference number: 3 (lower is better)
Translates to: LELVLDSPAVFTGSHVYTYSCFA*LKGEES
Trigger: GGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTA...AGTATAGACATGACTGCCCGTAAATACTGCTGGGGAGTCTAGGACTAATTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR TCA 72 bp ACCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTCAGATTCAGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: TNTLWGAWDGNI*NRVANFRFRGF
Trigger: GAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp ATACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTGATGTCCATCTCCACT +
Preference number: 3 (lower is better)
Translates to: IHQVELCPKCLV*VSHEGLMSIST
Trigger: AGTGGAGATGGACATCAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp GGGCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTaGACTGGACCTGAACATATTCAAAACACCAGGATT +
Preference number: 3 (lower is better)
Translates to: GLTQEVAVGSRV*TGPEHIQNTRI
Trigger: AATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR GCA 72 bp AGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTATCCTTGCCTATTTCT +
Preference number: 3 (lower is better)
Translates to: SFSSKSQAPSSW*RFQALLSLPIS
Trigger: AGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR GCA 72 bp TGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTCCGTCGTGCTTTTCTA +
Preference number: 3 (lower is better)
Translates to: CWSLFSSEASFC*SISSSFRRAFL
Trigger: TAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp GATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCTTTCCGTCGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: DCWSLFSSEASF*CSISSSFRRAF
Trigger: AAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTaGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATT +
Preference number: 3 (lower is better)
Translates to: MSFSSKSQAPSS*CRFQALLSLPI
Trigger: AATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGACACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 3 (lower is better)
Translates to: IMSGIHALLINCWTSLHRHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 3 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 3 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 3 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCAAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 3 (lower is better)
Translates to: VAPLESAELNVSGPSPSAKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGACTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 3 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 3 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp AGCTTTTTCTACCACAGAGTCTGCAACGTTCAAGAATaGATTTCACTCACATCGTCCCAGGACTGCCTCCTT +
Preference number: 3 (lower is better)
Translates to: SFFYHRVCNVQE*ISLTSSQDCLL
Trigger: AAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAGAAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399686.6
3UTR TCA 72 bp AGAAGTGGCTGTGGGATCAAGAGTCTGAACTGGACCTaGACATATTCAAAACACCAGGATTTTTCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: RSGCGIKSLNWT*TYSKHQDFSSP
Trigger: TGGGCTGGAAAAATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000468208.2
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp CACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTaGACTGGACCTGAACATATTCAAAACACCAGGATT +
Preference number: 3 (lower is better)
Translates to: HLTQEVAVGSRV*TGPEHIQNTRI
Trigger: AATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR GCA 72 bp CACGAGAGAGGTCTTTCATTAAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAGGGGAACAATATCCCC +
Preference number: 3 (lower is better)
Translates to: HERGLSLSHVHI*WKILLQGNNIP
Trigger: GGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGCAGATATGAACATGGCTTAATGAAAGACCTCTCTCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTCAGGGCTCACTCAAGA +
Preference number: 3 (lower is better)
Translates to: IMSGIHALLINC*TSLHRFRAHSR
Trigger: TCTTGAGTGAGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 3 (lower is better)
Translates to: APSSWCRFQALLSLPISWILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 3 (lower is better)
Translates to: SPELSRLPASVGVTKLLLQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 3 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 3 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTAGGAATCATCTGCACTaGTCACAGTTGAGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAARNHLH*SQLRRK
Trigger: CTTCCTTCTCAACTGTGACAAGTGCAGATGATTCCT...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663774.1
3UTR TCA 72 bp CGAAAGTACGGGCATCCACACACATCTCTACACCATTaGATTTTGAGTAGAAGAGCACAAAGGGGTATGGTT +
Preference number: 3 (lower is better)
Translates to: RKYGHPHTSLHH*ILSRRAQRGMV
Trigger: AACCATACCCCTTTGTGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp ACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAGCTTTCTCCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: TLDSREKLLYSL*FRQDLQLSPRP
Trigger: TGGCCTTGGAGAAAGCTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp GTTGTGATACGTAAAGGGCACTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTCAACCATTCTGTAACT +
Preference number: 3 (lower is better)
Translates to: VVIRKGHSTGHS*FSALSFNHSVT
Trigger: AGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp ATAATTATGAGTGGAATACACGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGATTCAGGGCTCACTCA +
Preference number: 3 (lower is better)
Translates to: IIMSGIHALLIN*WTSLHRFRAHS
Trigger: TGAGTGAGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACACTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 3 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 3 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp TGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTAAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 3 (lower is better)
Translates to: CNCIWEPITVLLQANSVLSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...TAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 3 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAALPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 3 (lower is better)
Translates to: FSPELSRLPASVGVTKLLDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR TCA 72 bp TGTTGTTCAAGCGCGTTCTGTACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCATACTGGTCAGTCCAT +
Preference number: 3 (lower is better)
Translates to: CCSSAFCTSALY*LVKASSYWSVH
Trigger: ATGGACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTTGAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 3 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 3 (lower is better)
Translates to: FSPELSRLPASVGVTKLLHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 3 (lower is better)
Translates to: EPLLTETPFACQQCTLDSLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCACCTCAGAGACTTTTCTaGACCAACCAATCTAGAGTG +
Preference number: 3 (lower is better)
Translates to: SPIHLLHLNQAFSTTESAPQRLF*TNQSRV
Trigger: CACTCTAGATTGGTTGGTCAAGAAAAGTCTCTGAGG...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399686.6
3UTR-3UTR CAA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 3 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 3 (lower is better)
Translates to: EPLLTETPFACQQCTLDSFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTTAGGATGAACATTTAC +
Preference number: 3 (lower is better)
Translates to: TVFLVDTHWPDT*FWNGCLRMNIY
Trigger: GTAAATGTTCATCCTAAGACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 3 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 3 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTGGAATTTAAAAAGATaGTGTACCCCACCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWWNLKR*CTPPGL
Trigger: CAGCCCAGGTGGGGTACACAATCTTTTTAAATTCCA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR-3UTR CAA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAATCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 3 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 3 (lower is better)
Translates to: KRVLYICTVLISESFFILKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 3 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKASEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
3UTR-3UTR CAA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 3 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 3 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR-3UTR CAA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: FSPELSRLPASVGVTKLLQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 3 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 3 (lower is better)
Translates to: KRVLYICTVLISESFFILSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 3 (lower is better)
Translates to: DFHFFNGLNKSALSLQILKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp ACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTaGAGCACCAGGGATTACACCTGTCATATATTCACT +
Preference number: 3 (lower is better)
Translates to: TVLSCPKEKKVH*STRDYTCHIFT
Trigger: AGTGAATATATGACAGGTGTAATCCCTGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
3UTR CCA 72 bp CTCCTGGTCATCTATAACCTCTTCTTTCTCTTCTTCTaGTTTTTCTTCTGGATTGTCTACTTCCTCATGATC +
Preference number: 3 (lower is better)
Translates to: LLVIYNLFFLFF*FFFWIVYFLMI
Trigger: GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGATGACCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTATCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 3 (lower is better)
Translates to: FSPELSRLPASVGVTKLLSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 3 (lower is better)
Translates to: DFHFFNGLNKSALSLQILKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR-3UTR CAA 90 bp TGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 3 (lower is better)
Translates to: CNCIWEPITVLLQANSVLFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...TAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR GCA 72 bp TTTATAATTACTGCAGTTACTATACTCATAATCAAATaGTATGGTGACCTCAGCATCCTTGGTGATGGCAGA +
Preference number: 3 (lower is better)
Translates to: FIITAVTILIIK*YGDLSILGDGR
Trigger: TCTGCCATCACCAAGGATGCTGAGGTCACCATAGCATTTGATTATGAGTATAGTAACTGCAGTAATTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000665872.1
ENST00000666307.1
3UTR CCA 72 bp TATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATGATCACTGGATACAGT +
Preference number: 3 (lower is better)
Translates to: YNLFFLFFWFFF*IVYFLMITGYS
Trigger: ACTGTATCCAGTGATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CCA 72 bp TGCTCTGGGTCTTTTATCCAGCAATTCCAAACGTATTaGTTTAACCTCTTTGTTGAAATTTCTCACAAATGT +
Preference number: 3 (lower is better)
Translates to: CSGSFIQQFQTY*FNLFVEISHKC
Trigger: ACATTTGTGAGAAATTTCAACAAAGAGGTTAAACCAATACGTTTGGAATTGCTGGATAAAAGACCCAGAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp GCCCCAGGGACCAGGCCCTCTTCCATTCACTACCAAGACAGGATACCCTCACTCGGCTGCGTGAGTCTCTaGGCGCAGGCGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: APGTRPSSIHYQDRIPSLGCVSL*AQAGGG
Trigger: GCCGCCGCCCGCCTGCGCTCAGAGACTCACGCAGCC...GAGTGAGGGTATCCTGTCTTGGTAGTGAATGGAAGAGGGCCTGGTCCCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCGGGACTGGGGCTGCGTaGGTCTCTGAGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HRFRAAERGVSPREATLGGTGAA*VSERRR
Trigger: CCGCCTGCGCTCAGAGACTCACGCAGCCCCAGTCCC...GCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR GCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGACGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: SFRVRAVSTAFLYRRRQAWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...GGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACACTGTGTTGGCGGACTaGCGGGACTGGGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GQLSGEFPLEKPLWAGLDTVLAD*RDWGCV
Trigger: CACGCAGCCCCAGTCCCGCCAGTCCGCCAACACAGT...GTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CCA 90 bp TTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTCGCCACGGCGTTTCCTaGCCGGGAATGGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: FRAAERGVSPREATLGWFRHGVS*PGMART
Trigger: GGTACGGGCCATTCCCGGCCAGGAAACGCCGTGGCG...AAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CCA 90 bp TCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: STDSGQLSGEFPLEKPLWGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...CCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp TCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: SFRVRAVSTAFLYRRRQAGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...GGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGDPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGATGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTCCGGCACTACTGTGTTaGCGGACTGGCGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TDSGQLSGEFPLEKPLWAPALLC*RTGGTG
Trigger: CCCAGTCCCGCCAGTCCGCCAACACAGTAGTGCCGG...AGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CCA 90 bp CACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTTTCCTGGCCGGGAATaGCCCGTACCCGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HRFRAAERGVSPREATLGFPGRE*PVPVRW
Trigger: CCACCTCACGGGTACGGGCCATTCCCGGCCAGGAAA...GCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp CCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PGVASWGLFEPE*GGGGVTGDRGR
Trigger: TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDASATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAAGTGCCTTCTGCACTaGCCCAGGGACCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AAERGVSPREATLGWFRLKCLLH*PRDQAL
Trigger: GAGGGCCTGGTCCCTGGGGCAGTGCAGAAGGCACTT...GAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGCCGGCACTACTGTGTTaGCGGACTGGCGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGPALLC*RTGGTG
Trigger: CCCAGTCCCGCCAGTCCGCCAACACAGTAGTGCCGG...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR CCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGGGCCGCCTGCCCGCTaGCCTCTCCCCTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSGPPAR*PLPLVK
Trigger: TTTAACCAAGGGGAGAGGCCAGCGGGCAGGCGGCCC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGCCCTCTCGAAATGCCTaGGATGGGGACTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVPSRNA*DGDWSR
Trigger: TCTACTCCAGTCCCCATCCCAGGCATTTCGAGAGGG...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR CAA 72 bp CCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTaGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTACT +
Preference number: 4 (lower is better)
Translates to: PFWATLTLLRRT*GMLPPSRSRST
Trigger: AGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp GATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: DVTLPCGRGLSL*GHPHAASEDLG
Trigger: CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PHAASEDLGDAPSFSESFPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: SFRVRAVSTAFLYRRRQAELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...GGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: FSFRVRAVSTAFLYRRRQGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...CTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGGCTCACTCAGCCCGCTaGCCGAGCGGAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQAAHSAR*PSGNAT
Trigger: AGTGGCGTTTCCGCTCGGGCAGCGGGCTGAGTGAGC...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGACCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGAGCACAAGACCTGTATaGTCTCCCTGGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVSTRPV*SPWSLT
Trigger: TGTGAGTGACCAGGGAGATCATACAGGTCTTGTGCT...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAACSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCATGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EDPCTPWAPVSETELLLPRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDASSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: FRAAERGVSPREATLGWFEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...AAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGGCTGCGTGAGTCTCTaGGCGCAGGCGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSGCVSL*AQAGGG
Trigger: GCCGCCGCCCGCCTGCGCTCAGAGACTCACGCAGCC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGACAGGCACAATGCACTaGTGGGGAGAAGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGTGTMH*WGEAGL
Trigger: CAGACCGGCTTCTCCCCATCAGTGCATTGTGCCTGT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCACGTGCCAGGCAGGGTaGGGGCCGCCTGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSTCQAG*GPPARW
Trigger: CCAGCGGGCAGGCGGCCCTCACCCTGCCTGGCACGT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTACGTGCCAGGCAGGGTaGGGGCCGCCTGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCTCQAG*GPPARW
Trigger: CCAGCGGGCAGGCGGCCCTCACCCTGCCTGGCACGT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGATCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGATTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSFRVRAVSTAFLYRRRQKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...CTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: SLHRFRAAERGVSPREATRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...AGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR GCA 90 bp TCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: SGQLSGEFPLEKPLWAGLRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...TAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR GCA 90 bp TCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: SFRVRAVSTAFLYRRRQADSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...GGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWENQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACACTGTGTTGGCGGACTaGCGGGACTGGGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDTVLAD*RDWGCV
Trigger: CACGCAGCCCCAGTCCCGCCAGTCCGCCAACACAGT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGGGCCGCCTGCCCGCTaGCCTCTCCCCTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDGPPAR*PLPLVK
Trigger: TTTAACCAAGGGGAGAGGCCAGCGGGCAGGCGGCCC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp ACCCTTGCAGTGGCTGGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGCCAGTGGTGATGATATaGTGTGGCAGAAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLAVAGVGTGAHPHSHGVPVVMI*CGRREV
Trigger: AACCTCTCTTCTGCCACACCATATCATCACCACTGG...CACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000666307.1
3UTR CAA 72 bp ACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: TELLLPCPAPAD*LLLCAESPPPP
Trigger: TGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RSSTGDGRPFRSERGMIVTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...GACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR TCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDSATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCACTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RFRAAERGVSPREATLGWLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...CCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSGEFPLEKPLWAGLDSERKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: GQLSGEFPLEKPLWAGLDDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...GTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR GCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDARCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTAAGTGCCTTCTGCACTaGCCCAGGGACCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGVSPREATLGWFRLRTIKCLLH*PRDQAL
Trigger: GAGGGCCTGGTCCCTGGGGCAGTGCAGAAGGCACTT...AATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCTCTCTGCTCCAATGGTaGGTAGGCTTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGSLLQW*VGLEEV
Trigger: CACCTCCTCCAAGCCTACCCACCATTGGAGCAGAGA...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: PHAASEDLGDAPSFSESFVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAASVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: PHAASEDLGDAPSFSESFTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQADPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDAGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGGGCCGCCTGCCCGCTaGCCTCTCCCCTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWGPPAR*PLPLVK
Trigger: TTTAACCAAGGGGAGAGGCCAGCGGGCAGGCGGCCC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRPSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGG...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
3UTR CAA 72 bp TTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLLPCPAPADLL*LCAESPPPPAE
Trigger: TTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp ATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTTGCTTTTGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: MGTSVGNGVTAA*PSSCRLAFALC
Trigger: GCACAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGACTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAALWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGACAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp CACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: HRFRAAERGVSPREATLGQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...GCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGAGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RAAERGVSPREATLGWFRGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...TCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp ACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TDSGQLSGEFPLEKPLWAGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...AGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: EDPCTPWAPVSETELLLPCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: QLSGEFPLEKPLWAGLDSTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...TGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWEIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FSFRVRAVSTAFLYRRRQIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...CTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCCCCAGGGACCAGGCCCTCTTCCATTCACTACCAAGACAGGATACCCTCACTCGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: APGTRPSSIHYQDRIPSLVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...GAGTGAGGGTATCCTGTCTTGGTAGTGAATGGAAGAGGGCCTGGTCCCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCACGTGCCAGGCAGGGTaGGGGCCGCCTGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLTCQAG*GPPARW
Trigger: CCAGCGGGCAGGCGGCCCTCACCCTGCCTGGCACGT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGGTCAGAACGAGGGATaGTCGTCTGGACAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAGQNEG*SSGQGE
Trigger: CTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407969.5
CDS-3UTR TCA 90 bp AGGTGTCGGAGGAGGAGGGGCTCCGTAATTATGATCAGCATAAGGCAGTCCTCGAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RCRRRRGSVIMISIRQSSSATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...CGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCTCCTCCGACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTAAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVSATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQASATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTAAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: RSSTGDGRPFRSERGMIVDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...GACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR GCA 90 bp ACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: TDSGQLSGEFPLEKPLWADSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...AGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR GCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PHPSFLLHCYPHLICCPAESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGTACAACAGGCACAATaGACTGATGGGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSVQQAQ*TDGEKP
Trigger: CGGCTTCTCCCCATCAGTGCATTGTGCCTGTTGTAC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PHAASEDLGDAPSFSESFCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SCDCWSLFSSEASFCCSIGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCACTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp TTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAGTGGGTCCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FSRGSDVHLHFC*GNQSQKWVRGR
Trigger: CCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCCTCAGCATCCTTGGTaGTGGCAGACACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATPQHPW*WQTQHR
Trigger: TCTATGCTGTGTCTGCCATCACCAAGGATGCTGAGG...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWEVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FSFRVRAVSTAFLYRRRQMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCCCCAGGGACCAGGCCCTCTTCCATTCACTACCAAGACAGGATACCCTCACTCCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: APGTRPSSIHYQDRIPSLQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...GAGTGAGGGTATCCTGTCTTGGTAGTGAATGGAAGAGGGCCTGGTCCCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQASCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: AAERGVSPREATLGWFRLAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...GAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTAGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLRVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACACAGGCACAATGCACTaGTGGGGAGAAGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDTGTMH*WGEAGL
Trigger: CAGACCGGCTTCTCCCCATCAGTGCATTGTGCCTGT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCAGACAGTCTTTGTATTaGGGCTGTGGACCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSRQSLY*GCGPWP
Trigger: TGGCCAAGGTCCACAGCCTCAATACAAAGACTGTCT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCAAGAGAGGTTGGTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PHAASEDLGDAPSFSESFKRGWS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGACCAACCTCTCTT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCACCGTAGCTGTACCATaGCAAACAGCCTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLATVAVP*QTAFYL
Trigger: CAGGTAAAAGGCTGTTTGTCATGGTACAGCTACGGT...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCAGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VAPLESAELNVSGPSPSAGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTTCCCACTCTTACCCTaGAGTCACAAGTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGFPLLP*SHKCML
Trigger: GAGCATGCACTTGTGACTGCAGGGTAAGAGTGGGAA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCTGATGAACAAGATCTaGTGCCAGAGAAACAATTGT +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDALMNKI*CQRNNC
Trigger: ACAATTGTTTCTCTGGCAGCAGATCTTGTTCATCAG...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGGGATCCCTCTCGAAATaGCTGGGATGGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLGSLSK*LGWGLE
Trigger: CTCCAGTCCCCATCCCAGGCATTTCGAGAGGGATCC...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLRDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCACTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWETHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VEGESSSSQLSVALLSPPRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRDKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCATTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRPFRSERGMIVWTGGEALGLFR*TFTSWC
Trigger: ACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAA...TGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR CCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGGGGCTAGACGTCCGCTaGAGTCAGGGAAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQGLDVR*SQGSAK
Trigger: TTTTGCACTTCCCTGACTCCAGCGGACGTCTAGCCC...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443339.5
CDS-3UTR TCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTGGGACTGGGGCTGCGTaGGTCTCTGAGCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCGTGAA*VSERRR
Trigger: CCGCCTGCGCTCAGAGACTCACGCAGCCCCAGTCCC...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR TCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQAGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCAGGAGGTGTTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: IQVRTRDDRLDRGRSRRCCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...ACACCTCCTGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACGGTCAGAACGAGGGATaGTCGTCTGGACAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHGQNEG*SSGQGE
Trigger: CTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACC...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR TCA 90 bp GGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCAGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: GRPFRSERGMIVWTGGEAVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...TGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR TCA 90 bp ACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: TDSGQLSGEFPLEKPLWAVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...AGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTAAGCACAAGACCTGTATaGTCTCCCTGGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVSTRPV*SPWSLT
Trigger: TGTGAGTGACCAGGGAGATCATACAGGTCTTGTGCT...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATCTCTATATGACTTGCTaGAAGCACAAGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNLYMTC*KHKTCM
Trigger: CATACAGGTCTTGTGCTTTCAGCAAGTCATATAGAG...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTCCATTCTCCCAGAAATaGTGCAATCCTGATGAACAA +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAAPFSQK*CNPDEQ
Trigger: TTGTTCATCAGGATTGCATCATTTCTGGGAGAATGG...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PHPSFLLHCYPHLICCPACSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PHAASEDLGDAPSFSESFSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GTVSPSEFGLSPQRSSTGVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...GCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: SLHRFRAAERGVSPREATSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...AGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: EGESSSSQLSVALLSPPDELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGAAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: FSFRVRAVSTAFLYRRRQRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...CTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCACGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGA +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPPCSHK*MLPNHG
Trigger: TCCATGATTGGGGAGCATGCACTTGTGACTGCAGGG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTCTCTGCTCCAATGGTaGGTAGGCTTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSLLQW*VGLEEV
Trigger: CACCTCCTCCAAGCCTACCCACCATTGGAGCAGAGA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLHRFRAAERGVSPREATISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...AGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCACAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: GRPFRSERGMIVWTGGEAQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...TGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR CCA 90 bp GCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: AERGVSPREATLGWFRLRTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...TCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp TTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLSHVGEGSPFWATLTLLCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TDSGQLSGEFPLEKPLWADFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...AGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: GLSLLGHPHAASEDLGDASCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGDPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSDPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGLGLFR*TFTSWC
Trigger: ACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTCCTCAGCATCCTTGGTaGTGGCAGACACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: PHPSFLLHCYPHLICCPAPQHPW*WQTQHR
Trigger: TCTATGCTGTGTCTGCCATCACCAAGGATGCTGAGG...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGACTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: AERGVSPREATLGWFRLRRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...TCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGACCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: ERGVSPREATLGWFRLRTMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...AGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCCAGAGGGAGAATTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCQRENS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTG...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665872.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: WKEKAPHPSFLLHCYPHLLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACTGGACCTGAGCACAAGACCTGTATaGTCTCCCTGGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: TPTSLKKWLWDQESELDLSTRPV*SPWSLT
Trigger: TGTGAGTGACCAGGGAGATCATACAGGTCTTGTGCT...CAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGCTCTATATGACTTGCTaGAAGCACAAGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTLYMTC*KHKTCM
Trigger: CATACAGGTCTTGTGCTTTCAGCAAGTCATATAGAG...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: DSGQLSGEFPLEKPLWAGKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...ACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGATCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: GTVSPSEFGLSPQRSSTGALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...GCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGGAGGGGCTCCGTAATTATGATCAGCATAAGGCAGTCCTCGACACCCATGCCTCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: RRGSVIMISIRQSSTPMPLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...AGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR GCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: LHRFRAAERGVSPREATLVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...CAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGCAGTCACAAGTGCATaGTCCCCAATCATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWAVTSA*SPIMEA
Trigger: CGCCTCCATGATTGGGGAGCATGCACTTGTGACTGC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGTACAACAGGCACAATaGACTGATGGGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDVQQAQ*TDGEKP
Trigger: CGGCTTCTCCCCATCAGTGCATTGTGCCTGTTGTAC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: EPGVASWGLFEPELGGGGTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...ACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQALPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: VLHDPFLDSFSASWVWFFNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...GAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GVLGMVTFETELLTSDSGEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGACAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: AERGVSPREATLGWFRLRQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...TCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCAAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: VAPLESAELNVSGPSPSAKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAGGCGGTCCTGCTCATaGGATCATCAACTCCTGATT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPRRSCS*DHQLLI
Trigger: AATCAGGAGTTGATGATCCCATGAGCAGGACCGCCT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACATGCTCCCCAATCATaGAGGCGGTCCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEHAPQS*RRSCSW
Trigger: CCATGAGCAGGACCGCCTCCATGATTGGGGAGCATG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTCTAGAGAAGCCACTCTaGGCTGGTTTAGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: ERGVSPREATLGWFRLRTLEKPL*AGLDSE
Trigger: TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAG...AGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGTGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000468208.2
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTACTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCAGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PQGHQVGTVSPSEFGLSPGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...TGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: VEGESSSSQLSVALLSPPTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: WKEKAPHPSFLLHCYPHLMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGACTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLRLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCTTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQAFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NRASLPKVRASTHISTPLPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCAGAGGGAGAATTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSQRENS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000665872.1
CDS-3UTR TCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATCAGAGGGAGAATTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDQRENS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTG...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
CDS-3UTR TCA 90 bp CTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LHRFRAAERGVSPREATLTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...CAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp ATGGAGTTCGGGCTGAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: MEFGLRIPAHHGHQCRKRTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...CCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SCDCWSLFSSEASFCCSILSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTATCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAAGACAGTCTTTGTATTaGGGCTGTGGACCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLRRQSLY*GCGPWP
Trigger: TGGCCAAGGTCCACAGCCTCAATACAAAGACTGTCT...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGCTTCAGTAATCCTGTaGAGAGGACTGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDASVIL*RGLAGR
Trigger: TCTTCCTGCCAGTCCTCTTCACAGGATTACTGAAGC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGGCTTCAGTAATCCTGTaGAGAGGACTGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLASVIL*RGLAGR
Trigger: TCTTCCTGCCAGTCCTCTTCACAGGATTACTGAAGC...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHRFRAAERGVSPREATLSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...CAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGACAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLRQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGGGCCACCCTCACGCTaGTTCGGAGGACCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQGPPSR*FGGPWG
Trigger: TCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQALRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTACTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: AERGVSPREATLGWFRLRNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...TCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTCATGGAGGCGGTCCTaGTCATGGGATCATCAACTC +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNSWRRS*SWDHQL
Trigger: GAGTTGATGATCCCATGAGCAGGACCGCCTCCATGA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGCTGGAGTCAGGGAAGTaGAAAAGGGGCAACTTCGTC +
Preference number: 4 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWLESGK*KRGNFV
Trigger: GACGAAGTTGCCCCTTTTGCACTTCCCTGACTCCAG...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443339.5
CDS-3UTR CCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTTCTCTGCTCCAATGGTaGGTAGGCTTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPSLLQW*VGLEEV
Trigger: CACCTCCTCCAAGCCTACCCACCATTGGAGCAGAGA...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAATSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCACTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp AGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RFRAAERGVSPREATLGWSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...CCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WKEKAPHPSFLLHCYPHLSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTATTGTGTACCCCACCTaGGCTGGCTCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCIVYPT*AGSRAP
Trigger: AGGAGCCCTGGAGCCAGCCCAGGTGGGGTACACAAT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp CCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCATGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: PQGHQVGTVSPSEFGLSPWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...TGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGEFPLEKPLWAGLDSELLGLFR*TFTSWC
Trigger: ACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAA...TAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGTTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWLGLFR*TFTSWC
Trigger: ACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAA...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000468208.2
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGVSPREATLGWFRLRTIIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...AATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp CTGGAAGGAAGCAGCTATGGGCTCATTCAGTTCTGTTaGCCCAAATCCAGAAGCCCTAGGAAAGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LEGSSYGLIQFC*PKSRSPRKVPS
Trigger: AGACGGGACTTTCCTAGGGCTTCTGGATTTGGGCAAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp CAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTGATATGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QWKEKAPHPSFL*HCYPHLICCPA
Trigger: AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RGVSPREATLGWFRLRTIVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...AATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATCTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYLCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQATNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAATTCTCCTGGGTGAGATaGGCCAGGTGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKFSWVR*ARCGQL
Trigger: CAGCTGGCCACACCTGGCTCATCTCACCCAGGAGAA...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQARWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTACTTCTGACCTCAAGTaGTCTGCTCTCTTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPTSDLK*SALLGL
Trigger: GAGGCCCAAGAGAGCAGATCACTTGAGGTCAGAAGT...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp TTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LEQHPPHSRSGCGIKSLNGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...GTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCACAGGCACAATGCACTaGTGGGGAGAAGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSTGTMH*WGEAGL
Trigger: CAGACCGGCTTCTCCCCATCAGTGCATTGTGCCTGT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCCAAGGAGCAATCTCTaGTCAACTCTCTCCATAAAC +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQPRSNL*STLSIN
Trigger: GTTTATGGAGAGAGTTGATCAGAGATTGCTCCTTGG...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLREASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SEFLCWTEKLNLRLASLREASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CGVLGMVTFETELLTSDSGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQAWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTCTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGTATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGTATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQAYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTACATCGTCCCAGGACTaGCTCCTTGTCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSTSSQD*LLVTEV
Trigger: GACTTCAGTGACAAGGAGGCAGTCCTGGGACGATGT...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCTCACTCAGCCCGCTaGCCGAGCGGAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWAHSAR*PSGNAT
Trigger: AGTGGCGTTTCCGCTCGGGCAGCGGGCTGAGTGAGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR GCA 90 bp TTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTGAAGGGGGAAGAATCCAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: FNPEIWYSCFALLKGEESRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...GGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR GCA 90 bp TTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: LEQHPPHSRSGCGIKSLNDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...GTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR GCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 4 (lower is better)
Translates to: RFLQELNVPSGRRGLRRLNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...GAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCACCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAAAGTGCCTTCTGCACTaGCCCAGGGACCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQKCLLH*PRDQAL
Trigger: GAGGGCCTGGTCCCTGGGGCAGTGCAGAAGGCACTT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCATTGTTAACAGCCTATaGAGACAGCAACTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCIVNSL*RQQLSQ
Trigger: TTGGCTGAGTTGCTGTCTGCATAGGCTGTTAACAAT...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PALLTGAECAIRQKGPSTLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: IPAHHGHQCRKRSYCCLAFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...GGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: EGESSSSQLSVALLSPPDMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KRVLYICTVLISESFFILEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTTTCCTGGCCGGGAATaGCCCGTACCCGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFFPGRE*PVPVRW
Trigger: CCACCTCACGGGTACGGGCCATTCCCGGCCAGGAAA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACGCCACGGCGTTTCCTaGCCGGGAATGGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSRHGVS*PGMART
Trigger: GGTACGGGCCATTCCCGGCCAGGAAACGCCGTGGCG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000468208.2
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LSGEFPLEKPLWAGLDSELYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCCATGAAACCTCACATGACATTTGCAGTGAGTGAGATGATCAAAGTGCCTTCTCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SMKPHMTFAVSEMIKVPSQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...AGAAGGCACTTTGATCATCTCACTCACTGCAAATGTCATGTGAGGTTTCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGGGGCCAACGAGTCTGTaGACACAGGGTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLGPTSL*TQGGRG
Trigger: GCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCC...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGCTGGAGTCGGTACTaGTGCACACCCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFGWSRY*CTPPLP
Trigger: TGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCAGCTCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AELVLYREIRLFGRGLEGSSHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGAGCT...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413704.5
CDS-3UTR CCA 90 bp AGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAATTATGAGTATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SIRQSSTPMPLSGPIIMSIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...ACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: GELEQHPPHSRSGCGIKSLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...ACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CCA 90 bp GGCAGGCCATTCAGGTCAGAACGAGGGATGATCGTCTGGACAGGGGGAGAAGCAAATGCCAAGGTCAACTaGGACATAAAAACAAGAACA +
Preference number: 4 (lower is better)
Translates to: GRPFRSERGMIVWTGGEANAKVN*DIKTRT
Trigger: TGTTCTTGTTTTTATGTCCCAGTTGACCTTGGCATT...TGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443339.5
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGACCTCAGCATCCTTGGTaGTGGCAGACACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRPQHPW*WQTQHR
Trigger: TCTATGCTGTGTCTGCCATCACCAAGGATGCTGAGG...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: NRASLPKVRASTHISTPLFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTGCTTGGGATGGTATTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: WEDLRVFTPTLCGVLGMVFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...TACCATCCCAAGCACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCACTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRALCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: VLHDPFLDSFSASWVWFFQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...GAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTCTTTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GVSPREATLGWFRLRTILFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...AAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGAGTGCCTCTGGAATCTaGTGGGCTTACCGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELSASGI*WAYRLQ
Trigger: TTGGAGGCGGTAAGCCCATCAGATTCCAGAGGCACT...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAGACTCCTGCTCTACATaGTCTGTCCCCTATCTCCCT +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRDSCST*SVPYLP
Trigger: AGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTC...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTGACATTTGCAGTGAGTaGGATGATCAAAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RGVSPREATLGWFRLRTIDICSE*DDQSAF
Trigger: GAAGGCACTTTGATCATCTCACTCACTGCAAATGTC...AATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000468208.2
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCCTCTATATGACTTGCTaGAAGCACAAGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTLYMTC*KHKTCM
Trigger: CATACAGGTCTTGTGCTTTCAGCAAGTCATATAGAG...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACAGACAGTCTTTGTATTaGGGCTGTGGACCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHRQSLY*GCGPWP
Trigger: TGGCCAAGGTCCACAGCCTCAATACAAAGACTGTCT...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: EGESSSSQLSVALLSPPDSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGGCCTAGAAGGCTTTaGTGGAGGTGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFGPRRL*WRWLGD
Trigger: GTCCCCAAGCCACCTCCAGCAAAGCCTTCTAGGCCC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAATTATGAGTGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SIRQSSTPMPLSGPIIMSALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...ACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGAGTCTGAGGGTCCCTaGAGGGTAGGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQESEGP*RVGLAA
Trigger: TGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAALTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGAAAAGAAGGTCCACTaGAGCACCAGGGATTACACC +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEEKKVH*STRDYT
Trigger: GGTGTAATCCCTGGTGCTGCAGTGGACCTTCTTTTC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGGCCTGCAATTCAGAACAAGTCTaGTTCAGTAATCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PPSSKAACDNSACCALACNSEQV*FSNPVK
Trigger: CTTCACAGGATTACTGAAGCAGACTTGTTCTGAATT...GCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCAATATCCCCTGCTTGGGAAGACCTCCGGGTATTCACACCAACACTCTGTGGGGATCCCTCTCGAAATaGCTTGATTTTCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SNIPCLGRPPGIHTNTLWGSLSK*LDFLRL
Trigger: AAGACGAAGAAAATCAAGGCATTTCGAGAGGGATCC...CCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGGATCCCTCTCGAAATaGCTTGATTTTCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VEGESSSSQLSVALLSPPGSLSK*LDFLRL
Trigger: AAGACGAAGAAAATCAAGGCATTTCGAGAGGGATCC...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTCTCTGCTCCAATGGTaGGTAGGCTTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCSLLQW*VGLEEV
Trigger: CACCTCCTCCAAGCCTACCCACCATTGGAGCAGAGA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTCAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: GEFPLEKPLWAGLDSELFSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...GAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGGAGATGAGCCAGGTGTaGCCAGCTGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLEMSQV*PAGDSL
Trigger: CAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTC...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGAGGGCTCTCCCTTTTaGGCCACCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQEGSPF*ATLTLL
Trigger: AAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAAGTGATCTGCTCTCTTaGGCCTCCCAAAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGSDLLS*ASQSAG
Trigger: TCCAGCACTTTGGGAGGCCCAAGAGAGCAGATCACT...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQALLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PQGHQVGTVSPSEFGLSPLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...TGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQADFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACAGGGTGGGCGGGGCTaGAATAGGACGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQQGGRG*NRTWKR
Trigger: TCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAGGCCCTTTCACCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTATTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: HRPFHHQVTRIHERGLSLFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...TAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGGGCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQALTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATATTGTGTACCCCACCTaGGCTGGCTCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYIVYPT*AGSRAP
Trigger: AGGAGCCCTGGAGCCAGCCCAGGTGGGGTACACAAT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp AGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAATTATGAGTCTAGAGAAGCCACTCTaGGCTGGTTTAGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SIRQSSTPMPLSGPIIMSLEKPL*AGLDSE
Trigger: TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAG...ACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCTAGAGAAGCCACTCTaGGCTGGTTTAGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSLEKPL*AGLDSE
Trigger: TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAG...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp GAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGTGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: ELEQHPPHSRSGCGIKSLWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...CAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCTTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSLGLFR*TFTSWC
Trigger: ACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAA...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NRASLPKVRASTHISTPLGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
3UTR CAA 72 bp CATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: HELFFKEPGTLQ*VQVPSFTILAY
Trigger: ATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
3UTR CAA 72 bp ATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTaGCTTTGCTTTGCTGAAGGGGGAAGAATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IRDVIQPRNLVQ*LCFAEGGRIPR
Trigger: CCTGGGGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: WKEKAPHPSFLLHCYPHLWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: GVLGMVTFETELLTSDSGLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGGTCTCGAACTTCTaGCCTCAAGTGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGLVSNF*PQVICS
Trigger: AGAGCAGATCACTTGAGGTCAGAAGTTCGAGACCAG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTCCTGCTTCCGCCGATaGAGTCTAATAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCSCFRR*SLITFP
Trigger: GGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AACTTCGTCATGAGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NFVMSIRQSSTPMPLSGPTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...GGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTCATGACGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443339.5
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCTGAGTCTTGACTCCTaGCCCTTGCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFLSLDS*PLQWLE
Trigger: CTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGTCCCGTCTGAGTCTTaGCTCCTGACCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQVPSES*LLTLAV
Trigger: CACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGAC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 4 (lower is better)
Translates to: ERGVSPREATLGWFRLRTMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...AGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp GGTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTTGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLDFLRLWCCTTLFWTLFWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...AAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp AGGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGAACATGTTATGGACATaGGGAATCTTGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: RGIRATPTSLKKWLWDQENMLWT*GILGQS
Trigger: TGACTGACCCAAGATTCCTCATGTCCATAACATGTT...CTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCCAAGGAGCAATCTCTaGTCAACTCTCTCCATAAAC +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSPRSNL*STLSIN
Trigger: GTTTATGGAGAGAGTTGATCAGAGATTGCTCCTTGG...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGCCTCTCGAAATGCCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGPLEMP*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGG...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: VAPLESAELNVSGPSPSAQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQAILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTESEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTCTTTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GVSPREATLGWFRLRTILSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...AAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAACTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCGGAAACGGAGTTACTaGTGCCTTGCCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRKRSY*CLAQLL
Trigger: CAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCGGGCTGAGGATCCCTaGACACCATGGGCACCAGTG +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLRAEDP*TPWAPV
Trigger: CACTGGTGCCCATGGTGTGCAGGGATCCTCAGCCCG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCTACACCATTGAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: NRASLPKVRASTHISTPLSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...CAATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGGAGGACCTTGGGGATaGTCCCTCCTTCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWGGPWG*SLLLGV
Trigger: GACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGAGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: EGEFLIFFVFGAARPFSGDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...TCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
CDS-3UTR GCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAGTCGGTACTGGTaGACACCCCCACTCCCACGG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSWSRYW*TPPLPR
Trigger: CCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PHPSFLLHCYPHLICCPAHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 4 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCPCSHK*MLPNHG
Trigger: TCCATGATTGGGGAGCATGCACTTGTGACTGCAGGG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GTCCTAGACTCCCCAGCAGTATTTACGGGCAGTCATGTCTATACTTTGGGGAAACTGGTACAGTTGCTTTaGTTTGCTGAAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLDSPAVFTGSHVYTLGKLVQLL*FAEGGR
Trigger: TCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAG...TTTCCCCAAAGTATAGACATGACTGCCCGTAAATACTGCTGGGGAGTCTAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR GCA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCAGAACAGGCCTCATATaGTTCAGACAGTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTRTGLI*FRQSLY
Trigger: ATACAAAGACTGTCTGAAGCATATGAGGCCTGTTCT...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATCTCTGCTCCAATGGTaGGTAGGCTTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTSLLQW*VGLEEV
Trigger: CACCTCCTCCAAGCCTACCCACCATTGGAGCAGAGA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGTTACTTCCTCCCTCTTCCAAGGCAGCTTGTGACAATTCTGCCTGCTGTGCATCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: CYFLPLPRQLVTILPAVHLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...ATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGGAAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGATTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CGVLGMVTFETELLTSDSRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCDPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHPSFLLHCYPHLICCPADKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCATGCTCCCCAATCATaGAGGCGGTCCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCHAPQS*RRSCSW
Trigger: CCATGAGCAGGACCGCCTCCATGATTGGGGAGCATG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGATTGTGTACCCCACCTaGGCTGGCTCCAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWIVYPT*AGSRAP
Trigger: AGGAGCCCTGGAGCCAGCCCAGGTGGGGTACACAAT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGCCCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GVLGMVTFETELLTSDSGPSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGG...CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: TILPAVHWPASDALVFGLLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCACTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SPIHLLHLNQAFSTTESALCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: EGEFLIFFVFGAARPFSGQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...TCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VLHDPFLDSFSASWVWFFGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...GAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGACAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIIRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGCCTCCTTGTCACTaGAGTCTCAGTTTAAATGTC +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPLPPCH*SLSLNV
Trigger: GACATTTAAACTGAGACTTCAGTGACAAGGAGGCAG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQATSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFSATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATTATGATCAGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: IMISIRQSSTPMPLSGPISLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...TATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR TCA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGAAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGAAGCACAAGACCTGTATaGTCTCCCTGGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRSTRPV*SPWSLT
Trigger: TGTGAGTGACCAGGGAGATCATACAGGTCTTGTGCT...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCCCAAGGAGCAATCTCTaGTCAACTCTCTCCATAAAC +
Preference number: 4 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVPRSNL*STLSIN
Trigger: GTTTATGGAGAGAGTTGATCAGAGATTGCTCCTTGG...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCGCTTCAGTAATCCTGTaGAGAGGACTGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLASVIL*RGLAGR
Trigger: TCTTCCTGCCAGTCCTCTTCACAGGATTACTGAAGC...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTESTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAAACGGAGTTACTGCTaGCTTGCCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFKRSYC*LAQLLQ
Trigger: CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACAAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: VHDLLMNRASLPKVRASTSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...TGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGTATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTGTGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: LCFRGRILDFLRLWCCTTSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...GGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACATTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: VAPLESAELNVSGPSPSARVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGACCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: SHEGLMSISTSAWETSLRPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTTTGACTCCTGACCCTTaGAGTGGCTGGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: VLYICTVLISESFFILVSLTPDP*SGWSRY
Trigger: GTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAA...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQALLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VAPLESAELNVSGPSPSAHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 4 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATCATGGAGGCGGTCCTaGTCATGGGATCATCAACTC +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPSWRRS*SWDHQL
Trigger: GAGTTGATGATCCCATGAGCAGGACCGCCTCCATGA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGCAGTCACAAGTGCATaGTCCCCAATCATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFAVTSA*SPIMEA
Trigger: CGCCTCCATGATTGGGGAGCATGCACTTGTGACTGC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCTGATGAACAAGATCTaGTGCCAGAGAAACAATTGT +
Preference number: 4 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYLMNKI*CQRNNC
Trigger: ACAATTGTTTCTCTGGCAGCAGATCTTGTTCATCAG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTECSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTESECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACCAGGTGTGGCCAGCTaGGGACTCTTTGAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLPGVAS*GLFEPE
Trigger: TTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGG...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: SPIHLLHLNQAFSTTESANQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTTCTGTCCGAAATGCCTaGTCTGAGTTTCTCACGAGG +
Preference number: 4 (lower is better)
Translates to: GLDFLRLWCCTTLFWTLFSVRNA*SEFLTR
Trigger: CCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGA...AAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGACC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTTCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSSGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGA...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VEGESSSSQLSVALLSPPSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTESITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTGGTGTCCCCGTAAATaGGGCCAACGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFWCPRK*GQRVCG
Trigger: TCCACAGACTCGTTGGCCCCATTTACGGGGACACCA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAAACCGCAGATACCCTaGAGGCCTGGTAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFKPQIP*RPGRQL
Trigger: CAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGACCCTTGCAGTGGCTaGAGTCGGTACTGGTGCACA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWDPCSG*SRYWCT
Trigger: TGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNDKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACTGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTGGACATGAGGAATCTTaGGTCAGTCACCTTTATATA +
Preference number: 4 (lower is better)
Translates to: GELEQHPPHSRSGCGIKSGHEES*VSHLYI
Trigger: TATATAAAGGTGACTGACCCAAGATTCCTCATGTCC...ACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CCA 90 bp AGGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGAAACACAATACAAACTaGCTACCTACTAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGIRATPTSLKKWLWDQEKHNTN*LPTNAG
Trigger: CCCTGCATTAGTAGGTAGCCAGTTTGTATTGTGTTT...CTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR CAA 72 bp GGCAAGGATGGGAGACGGAGGCTTCAACACAACTCATaGCACTTAGAACCGTTACTAACCGAAACACCATTT +
Preference number: 4 (lower is better)
Translates to: GKDGRRRLQHNS*HLEPLLTETPF
Trigger: AAATGGTGTTTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCCATCCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp TCATTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTaGCTGAAGGGGGAAGAATCCCCAGGGACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SFNPEIWYSCFA*LKGEESPGTVK
Trigger: TTTCACAGTCCCTGGGGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCCTCAGCATCCTTGGTaGTGGCAGACACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYPQHPW*WQTQHR
Trigger: TCTATGCTGTGTCTGCCATCACCAAGGATGCTGAGG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCCTCAGCATCCTTGGTaGTGGCAGACACAGCATAGA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFPQHPW*WQTQHR
Trigger: TCTATGCTGTGTCTGCCATCACCAAGGATGCTGAGG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGAGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTGGTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLVLLL*ARFSWS
Trigger: TGACCAGGAGAACCTAGCTCATAGCAGGAGGACCAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATACTCTGTTCCAAGGGCTaGTCCCGCCGCTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIILCSKG*SRRFFL
Trigger: AAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAG...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGCATTGGCCTGCTTCTaGCGCTTTAGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLALACF*RFSLWA
Trigger: AGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAALLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQALWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCATCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: SPIHLLHLNQAFSTTESASESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACTCAGAGACTTTTCTTaGCCAACCAATCTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGLRDFS*PTNLEW
Trigger: CCACTCTAGATTGGTTGGTCAAGAAAAGTCTCTGAG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGAATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTCTTCAGAGGGAGAATTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GVSPREATLGWFRLRTILQRENS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTG...AAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR TCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTGGGTTACTGAGCTGTaGAATAGCTTGGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCWVTEL*NSLGRG
Trigger: CCCCCTTCCCAAGCTATTTCACAGCTCAGTAACCCA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGCATCCCAGGCAACATaGTTTCCACTCCCAATGCTC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLASQAT*FPLPML
Trigger: GAGCATTGGGAGTGGAAATCATGTTGCCTGGGATGC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCATCCCAGGCAACATaGTTTCCACTCCCAATGCTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQASQAT*FPLPML
Trigger: GAGCATTGGGAGTGGAAATCATGTTGCCTGGGATGC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATGGTCAGAACGAGGGATaGTCGTCTGGACAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINGQNEG*SSGQGE
Trigger: CTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACC...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000443339.5
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQASEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: PADLLLLCAESPPPPAEFKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTGCAGCAATATCCCCTaGTTGGGAAGACCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWCSNIP*LGRPPG
Trigger: ACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: LYTTQWKEKAPHPSFLLHALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...GTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRASVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTESHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCGCCTTGCCCAGCTCCTaGAGACTTGCTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIALPSS*RLAFAL
Trigger: CAGAGCAAAAGCAAGTCTGCAGGAGCTGGGCAAGGC...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTGAGTTACTGCTGCCTTaGCCAGCTCCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSELLLP*PAPADL
Trigger: CAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTC...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTAGAGTGGGGGTGAGCTaGAGAGCCTCATCCAACATG +
Preference number: 4 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCRVGVS*RASSNM
Trigger: CATGTTGGATGAGGCTCTGCAGCTCACCCCCACTCT...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTENSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 4 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 4 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACTCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATCATGGAGGCGGTCCTaGTCATGGGATCATCAACTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSWRRS*SWDHQL
Trigger: GAGTTGATGATCCCATGAGCAGGACCGCCTCCATGA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCCCTGCAGTCACAAGTaGATGCTCCCCAATCATGGA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYPCSHK*MLPNHG
Trigger: TCCATGATTGGGGAGCATGCACTTGTGACTGCAGGG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTCTGATGAACAAGATCTaGTGCCAGAGAAACAATTGT +
Preference number: 4 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSLMNKI*CQRNNC
Trigger: ACAATTGTTTCTCTGGCAGCAGATCTTGTTCATCAG...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAGAACAGGCCTCATATaGTTCAGACAGTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWRTGLI*FRQSLY
Trigger: ATACAAAGACTGTCTGAAGCATATGAGGCCTGTTCT...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQATSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: VLYICTVLISESFFILVSHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAGCAATATCCCCTGCTTaGGAAGACCTCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLAISPA*EDLRVF
Trigger: GAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGC...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTACTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SCDCWSLFSSEASFCCSIISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTGAAGGGGGAAGAATCCCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: FNPEIWYSCFALLKGEESQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...GGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CCA 90 bp TGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: CFRGRILDFLRLWCCTTLQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...AAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
CDS-3UTR CCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: EGEFLIFFVFGAARPFSGLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...TCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
CDS-3UTR CCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACACTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VTILPAVHWPASDALVFGSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SCDCWSLFSSEASFCCSIFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACATTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGGCTACAGGCAAGGATaGGAGACGGAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWGYRQG*ETEAST
Trigger: TGTTGAAGCCTCCGTCTCCCATCCTTGCCTGTAGCC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: CFRGRILDFLRLWCCTTLLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...AAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665872.1
CDS-3UTR CCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAALVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAATTATGAGTAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: SIRQSSTPMPLSGPIIMSKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...ACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEDKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CGVLGMVTFETELLTSDSIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCATCCCTGGTACTGCCTaGAATAGACTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKAIPGTA*NRLGFW
Trigger: CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGAT...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAATTGGTTTCAGAAATaGCCAACAGTCTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYNWFQK*PTVSVS
Trigger: TGATACAGAGACTGTTGGCCATTTCTGAAACCAATT...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATAATTGGTTTCAGAAATaGCCAACAGTCTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: EGESSSSQLSVALLSPPDNWFQK*PTVSVS
Trigger: TGATACAGAGACTGTTGGCCATTTCTGAAACCAATT...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGTTCAACCCAGAAATCTaGTACAGTTGCTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ELEQHPPHSRSGCGIKSLFNPEI*YSCFAL
Trigger: CAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAA...CAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
3UTR CAA 72 bp TTGAGTAGGGAAGGTCTATCAGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: LSREGLSAQLLV*ESRYPTFAKSR
Trigger: CCTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGATAGACCTTCCCTACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp GCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACAGTTAAGGTGATGCTT +
Preference number: 4 (lower is better)
Translates to: AARPFSGLFFRF*GLVLLTVKVML
Trigger: AAGCATCACCTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp AACCAAACCCAAATCACCTCAAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTAAGAGATGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: NQTQITSNCRGV*QRLAVVRDVTG
Trigger: ACCAGTCACATCTCTTACTACTGCTAGTCGCTGCAACACTCCTCTACAGTTTGAGGTGATTTGGGTTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443339.5
CDS-3UTR TCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCTCAGGGATAAAGGGTaGGCCAAAGCGAATGTAGTG +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLRDKG*AKANVV
Trigger: CACTACATTCGCTTTGGCTCACCCTTTATCCCTGAG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGAGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: EGEFLIFFVFGAARPFSGGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...TCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
CDS-3UTR TCA 90 bp TCCATGAAACCTCACATGACATTTGCAGTGAGTGAGATGATCAAAGTGCCTTCTCTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SMKPHMTFAVSEMIKVPSLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...AGAAGGCACTTTGATCATCTCACTCACTGCAAATGTCATGTGAGGTTTCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAGGAGCCAGGTCAGAATaGCCTGAGTTGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLGARSE*PELSRE
Trigger: TTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCC...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTTTTCTCACGAGGGTCTaGTGTCCATCTCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: VLYICTVLISESFFILVSFLTRV*CPSPLL
Trigger: CAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAA...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCCGAAATGCCTGGTCTaGGTTTCTCACGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLPKCLV*VSHEGL
Trigger: CAGACCCTCGTGAGAAACTCAGACCAGGCATTTCGG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACCTTTCACCACCAGGTaGCAAGGATCCACGAGAGAG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSPFTTR*QGSTRE
Trigger: CTCTCTCGTGGATCCTTGTCACCTGGTGGTGAAAGG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATAGATGGAGTTCGGGCTaGGGATCCCTGCACACCATG +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINRWSSG*GSLHTM
Trigger: CATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCT...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCTCGGAGTCGTTCTACTaGTGTGGGAACCATCCACCT +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSSESFY*CGNHPP
Trigger: AGGTGGATGGTTCCCACATCAGTAGAACGACTCCGA...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTACTGCTATCCCCACCTaGTATGTTGTCCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSTAIPT*YVVLLP
Trigger: CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGT...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCTTCCGGTGCTTTTaGACACGAGTGACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFIFRCF*TRVTLP
Trigger: GGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGAT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTGAAGGAGGCTTTGTaGTTCTGTCCGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQLKEAL*FCPRTI
Trigger: GATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGGGGAGGAACTCTGCTaGAGGAGGCTTTGTGATTCT +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSGEELC*RRLCDS
Trigger: AGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCC...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATCCTCACTGCACAAGTaGCTACGGGCTACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSSSLHK*LRATGK
Trigger: CTTGCCTGTAGCCCGTAGTCACTTGTGCAGTGAGGA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCGACATTTGCAGTGAGTaGGATGATCAAAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQADICSE*DDQSAF
Trigger: GAAGGCACTTTGATCATCTCACTCACTGCAAATGTC...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp ACCCTCCTTTCTCCTTTTTATATGGGAATAAGCCCAAACACTGCTTTTCATTTTAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TLLSPFYMGISPNTAFHFSATSS*KVGGFH
Trigger: GTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACT...AAAATGAAAAGCAGTGTTTGGGCTTATTCCCATATAAAAAGGAGAAAGGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRAVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACAGTCTCTTCTCTATATaGCTTGCTGAAAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHSLFSI*LAESTR
Trigger: TCTTGTGCTTTCAGCAAGTCATATAGAGAAGAGACT...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCCATTCTCCCAGAAATaGTGCAATCCTGATGAACAA +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVPFSQK*CNPDEQ
Trigger: TTGTTCATCAGGATTGCATCATTTCTGGGAGAATGG...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCATCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CGVLGMVTFETELLTSDSSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: EGESSSSQLSVALLSPPDKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HDLLMNRASLPKVRASTHSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACATGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: VHDLLMNRASLPKVRASTWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...TGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: GVLGMVTFETELLTSDSGWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAGCCATGTTCATATCTaGTGGAAAATCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTSHVHI*WKILLQ
Trigger: CTGCAGAAGGATTTTCCAGCAGATATGAACATGGCT...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACTTGCTTTTGCTCTGTaGAGAGTCACCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSLAFAL*RVTSPT
Trigger: GGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGATATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQARCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: VLYICTVLISESFFILVSLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: SCDCWSLFSSEASFCCSILPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: VHDLLMNRASLPKVRASTLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...TGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTCCTCCTTGGAAGATTaGTGCCAGTGCTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFSSLED*CQCCFQ
Trigger: CTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: ARPFSGLFFRFLGLVLLTNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: EGESSSSQLSVALLSPPDLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTTTCCCACTCTTACCCTaGAGTCACAAGTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFFPLLP*SHKCML
Trigger: GAGCATGCACTTGTGACTGCAGGGTAAGAGTGGGAA...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTACAACAGGCACAATaGACTGATGGGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWVQQAQ*TDGEKP
Trigger: CGGCTTCTCCCCATCAGTGCATTGTGCCTGTTGTAC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGAAAAGAAGGTCCACTaGAGCACCAGGGATTACACC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFEKKVH*STRDYT
Trigger: GGTGTAATCCCTGGTGCTGCAGTGGACCTTCTTTTC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGAAAAGAAGGTCCACTaGAGCACCAGGGATTACACC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLEKKVH*STRDYT
Trigger: GGTGTAATCCCTGGTGCTGCAGTGGACCTTCTTTTC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: APSSWCRFQALLSLPISWFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACACACCAACACTCTGTaGGGTGCTTGGGATGGTAAC +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLHTNTL*GAWDGN
Trigger: GTTACCATCCCAAGCACCCCACAGAGTGTTGGTGTG...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKAVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: SPIHLLHLNQAFSTTESAAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCAACCAGTCTCAGAAGTaGGTCCGAGGGAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSNQSQK*VRGRDE
Trigger: CTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTT...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATGATCCCTGCACACCATaGGCACCAGTGTCGGAAACG +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINDPCTP*APVSET
Trigger: CGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATC...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATTGCTTCGGAGGACCTTaGGGATGCTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINCFGGP*GCSLLL
Trigger: GAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCA...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTCCATCCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SCDCWSLFSSEASFCCSILYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...GATGGAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATGGCTGGAATAGGACGTaGAAGAGAGGGATGATTCTG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYGWNRT*KRGMIL
Trigger: CAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCC...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAGGGCAGCTCCTCCTTaGAAGATTGCTGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSRAAPP*KIAASA
Trigger: AGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGTCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGGATAAACAGTATTCTTaGTGGACACACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLDKQYS*WTHIGQ
Trigger: CTGGCCAATGTGTGTCCACCAAGAATACTGTTTATC...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTAGCTGTGAAATAGCTTaGGAAGGGGGAGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLSCEIA*EGGVGW
Trigger: CCATCCTACTCCCCCTTCCCAAGCTATTTCACAGCT...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGGCGGTCCTGCTCATaGGATCATCAACTCCTGATT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRRSCS*DHQLLI
Trigger: AATCAGGAGTTGATGATCCCATGAGCAGGACCGCCT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCTTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKALGLFR*TFTSWC
Trigger: ACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAA...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp AATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTaGTCACTGAAGTCTCAGTTTAAATGTCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: NEFHSHRPRTAS*SLKSQFKCQLL
Trigger: GAGGAGTTGACATTTAAACTGAGACTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTTTCCGGTTTCCCTTGTaGCAGGCACAGTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSFRFPL*QAQSTL
Trigger: TAAAGTGGACTGTGCCTGTCACAAGGGAAACCGGAA...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGTGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATATGGGATCCAGTAATTaGCACCACAGTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYMGSSN*HHSWVR
Trigger: TCTGACCCAACTGTGGTGTCAATTACTGGATCCCAT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCTCTTGGGGTACAGATaGTGTTTGAGTCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCLLGYR*CLSHPF
Trigger: GAAGGGATGACTCAAACATCATCTGTACCCCAAGAG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTTTGGTATAGGTGCTaGGTTCTAGTCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQLWYRC*VLVSWG
Trigger: ACCCCAAGAGACTAGAACTCAGCACCTATACCAAAG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTACAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCAGAATGACCTGAGTTaGGTAGGGAAGGTCTATCAG +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLQNDLS*VGKVYQ
Trigger: CTGATAGACCTTCCCTACTCAACTCAGGTCATTCTG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCCCATCCACCTACTGCTaGTATTCTCTTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIPSTYC*YSLEVC
Trigger: GCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTTCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLSICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGGATTGCAATGCTCATaGCGTCCAACACAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWGLQCS*RPTQQR
Trigger: TCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTAATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: LIRDVIQPRNLVQLLCFAMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...AGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTATGCACTTGTCACAGTTaGGAAGGAAGCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILCTCHS*EGSHPE
Trigger: CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCA...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAGACGACCTAGAGTTCTaGGGAAAGGAGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSDDLEF*GKEVEL
Trigger: GAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTC...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTGTGGGTAGTGCTGTaGATTGGAAACCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWVWVVL*IGNRRY
Trigger: GTATCTGCGGTTTCCAATTCACAGCACTACCCACAC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCATCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: CGVLGMVTFETELLTSDSSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...TGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CTGGAATTAGTCCTAGACTCCCCAGCAGTATTTACGGGCAGTCATGTCTATACTAGTCTCTTCTCTATATaGCTTGCTGAAAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LELVLDSPAVFTGSHVYTSLFSI*LAESTR
Trigger: TCTTGTGCTTTCAGCAAGTCATATAGAGAAGAGACT...AGTATAGACATGACTGCCCGTAAATACTGCTGGGGAGTCTAGGACTAATTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGAAGCCTCATTCTGCTaGTCCATCTCTAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFEASFC*SISSSF
Trigger: GAAAGAGCTAGAGATGGAGCAGCAGAATGAGGCTTC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTATCTGAAGCCTCATTCTaGTGCTCCATCTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLSEASF*CSISSS
Trigger: AGAGCTAGAGATGGAGCAGCAGAATGAGGCTTCAGA...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTACTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CNCIWEPITVLLQANSVLLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...TAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KRVLYICTVLISESFFILSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTACTGCAGACTTGCTTTTaGTCTGTGCAGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILLQTCF*SVQSHL
Trigger: GAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAG...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTACAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGTTTATAGAAAGAGTTTaGCGACTCCTGCTCTACATG +
Preference number: 4 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKFIERV*RLLLYM
Trigger: CATGTAGAGCAGGAGTCGGCAAACTCTTTCTATAAA...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGACTCCCAGAGGGATTaGAATGCTCATGACGTCCAA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWDSQRD*NAHDVQ
Trigger: TTGGACGTCATGAGCATTGCAATCCCTCTGGGAGTC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCATTGGCCAGATACCTaGTTTTGGAATGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSHWPDT*FWNGCL
Trigger: AAGACAACCATTCCAAAAGCAGGTATCTGGCCAATG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCACCCTCCAGTTGGTaGAGGTTCCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWAPSSW*RFQALL
Trigger: TAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTTCCCACTCTTACCCTaGAGTCACAAGTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWFPLLP*SHKCML
Trigger: GAGCATGCACTTGTGACTGCAGGGTAAGAGTGGGAA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTATTGTTAACAGCCTATaGAGACAGCAACTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCIVNSL*RQQLSQ
Trigger: TTGGCTGAGTTGCTGTCTGCATAGGCTGTTAACAAT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCATTGTTAACAGCCTATaGAGACAGCAACTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSIVNSL*RQQLSQ
Trigger: TTGGCTGAGTTGCTGTCTGCATAGGCTGTTAACAAT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp CCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PALHDLSPISLLQDLLSSLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...AGAGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCCTTTCTATCTTCCCTaGTCCTCCTGCTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFPFYLP*SSCYEL
Trigger: TAGCTCATAGCAGGAGGACCAGGGAAGATAGAAAGG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: SPIHLLHLNQAFSTTESAVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACTGCCTGCTGTGCATTaGCCTGCTTCTGACGCTTTA +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSLPAVH*PASDAL
Trigger: TAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTCGTTCTACTGATGTaGGAACCATCCACCTACTGC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWVVLLM*EPSTYC
Trigger: GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGAC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCACTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRALYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKADFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: LCFRGRILDFLRLWCCTTSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...GGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATGCTGGTAGCTGTATCTaGAAGGGCTGTAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYAGSCI*KGCKLL
Trigger: CAACAGTTTACAGCCCTTCCAGATACAGCTACCAGC...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTTGGTGGACACACATTaGCCAGATACCTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYLVDTH*PDTCFW
Trigger: CCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTAATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTACCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LIRDVIQPRNLVQLLCFATSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGT...AGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGGTGATGATATGGTGTaGCAGAAGAGAGGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFGDDMV*QKRGWS
Trigger: AGACCAACCTCTCTTCTGCCACACCATATCATCACC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCGCCTGGGATGGGGACTaGAGTAGAAGAAACTTTGAG +
Preference number: 4 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIAWDGD*SRRNFE
Trigger: CTCAAAGTTTCTTCTACTCCAGTCCCCATCCCAGGC...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAGTCATTATTCTCCTCTaGAGCCTCATTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLVIILL*SLILLL
Trigger: GAGCAGCAGAATGAGGCTTCAGAGGAGAATAATGAC...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQAFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTACCAACAGGAGTCTCTaGGGTGGTTGTAGTAATCTC +
Preference number: 4 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSTNRSL*GGCSNL
Trigger: GAGATTACTACAACCACCTCAGAGACTCCTGTTGGT...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCAGTTGGATCCGTTGTaGTACGTAAAGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWQLDPL*YVKGTQ
Trigger: TTGAGTGCCCTTTACGTATCACAACGGATCCAACTG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCCGAAGTAACTTGGTaGCATTCTGCTCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWAEVTW*HSAPSD
Trigger: ATCTGATGGAGCAGAATGTCACCAAGTTACTTCGGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLLSLSL*CYSPMW
Trigger: CCACATGGGAGAGTAACATCACAGAGAAAGACTCAG...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATATCCATCTGCAGGGTCTaGGTCTTTCTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIISICRV*VFLCDV
Trigger: AACATCACAGAGAAAGACTCAGACCCTGCAGATGGA...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACAGAGGGAGAATTCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPQRENS*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FGVHDLLMNRASLPKVRATSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCTTTTGAACACGAGTaGCTCTTCCCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWAFEHE*LFPAVT
Trigger: AGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 4 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GGGCAGTCATGTCTATACTTTGGGGAAAACACCAATTGTAAGATTAACTGCTCTGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: GQSCLYFGENTNCKINCSVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...AGAGCAGTTAATCTTACAATTGGTGTTTTCCCCAAAGTATAGACATGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGAAGTCTCTTCTCTATATaGCTTGCTGAAAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: IMSGIHALLINCWTSLHRSLFSI*LAESTR
Trigger: TCTTGTGCTTTCAGCAAGTCATATAGAGAAGAGACT...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACCATTCTCCCAGAAATaGTGCAATCCTGATGAACAA +
Preference number: 4 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKPFSQK*CNPDEQ
Trigger: TTGTTCATCAGGATTGCATCATTTCTGGGAGAATGG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTGAATCATCCCATCTaGAATCATGTGTCGCACCTC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWVNHPI*NHVSHL
Trigger: GAGGTGCGACACATGATTGCAGATGGGATGATTCAC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCAGACACAGCATAGATaGACAGGTGAATCATCCCAT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLQTQHR*TGESSH
Trigger: ATGGGATGATTCACCTGTGCATCTATGCTGTGTCTG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATCTTCCCTGGTCCTCCTaGTATGAGCTAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINLPWSS*YELGSP
Trigger: AGGAGAACCTAGCTCATAGCAGGAGGACCAGGGAAG...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCATCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SPIHLLHLNQAFSTTESASLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATCTCTACATCAGAGTTaGTCTGTTCCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSLHQS*SVPRAD
Trigger: ATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGCACTCTTGCTTCTCTaGTTTGTCATTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTALLLL*FVIQPF
Trigger: GAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAGTGTTTGGGGGTGGTaGAAATTAACGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSVWGW*KLTGNG
Trigger: TCCATTCCCCGTTAATTTGCACCACCCCCAAACACT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAGTCCATCTCCACTTCTaGTTGGGAAACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSVHLHF*LGNQSQ
Trigger: CTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGAC...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTTCGATACAGTCCATCTaGTCGAGGCATAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLSIQSI*SRHSIQ
Trigger: TTGAATGCTATGCCTCGAGCAGATGGACTGTATCGA...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAGCTGGAAAATCCTTCTaGAGGGGAACAATATCCCCC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSAGKSF*RGTISP
Trigger: GGGGGATATTGTTCCCCTGCAGAAGGATTTTCCAGC...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACAGCTCCTGCAGACTTaGTTTTGCTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSQLLQT*FCSVQS
Trigger: ACTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAGTGAGATGAAGAAGTaGCTCTGGAATCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSEMKK*LWNLMG
Trigger: GCCCATCAGATTCCAGAGGCACTTCTTCATCTCACT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGCTCTTCTCATTAACTaGTGGACTAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWALLIN*WTSLHR
Trigger: TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGCTTTCTGTTGCACTaGTATCCCCACCTGATATGT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYSFLLH*YPHLIC
Trigger: ACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCCTTCGTCTTTGGTGCTaGACGACCCTTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSLRLWC*TTLFWT
Trigger: AGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAG...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTTTTCTTCGTCTTTGGTaGTGCACGACCCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSFLRLW*CTTLFW
Trigger: CCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAA...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: KRVLYICTVLISESFFILRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQAPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAACTCAGAGTTCCTGTaGTGGACTGAGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTNSEFL*WTEKLN
Trigger: ATTCAGTTTCTCAGTCCAGCACAGGAACTCTGAGTT...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTTCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TTAATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTGAAATCTGGTACAGTTaGTTTGCTTTGCTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LIRDVIQPRNLVQLLCFAEIWYS*FALLKG
Trigger: CCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTC...AGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR GCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCAATTCAGAACAAGTCTaGTTCAGTAATCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSNSEQV*FSNPVK
Trigger: CTTCACAGGATTACTGAAGCAGACTTGTTCTGAATT...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp ACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTCTGTTCCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: TGVSEVVVVISTSELLCSFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...GGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATGTCTTTGGGCTGAACTaGTCCTGTACCGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDVFGLN*SCTEKF
Trigger: GAATTTCTCGGTACAGGACCAGTTCAGCCCAAAGAC...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCGCAGCACGGTTGACATaGGATCCAGTAATTGACACC +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSAARLT*DPVIDT
Trigger: GGTGTCAATTACTGGATCCCATGTCAACCGTGCTGC...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYCSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTAGCGAATGTAGTGTTTaGGGGTGGTGCAAATTAACG +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLSECSV*GWCKLT
Trigger: CGTTAATTTGCACCACCCCCAAACACTACATTCGCT...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCAACACAGCAGAGATTaGAAATCACGGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLQHSRD*KSRGPI
Trigger: AATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTACCCATGCCTCTGAGTaGTCCCATAATTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCTHASE*SHNYEW
Trigger: CCACTCATAATTATGGGACCACTCAGAGGCATGGGT...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTATGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTGCACGACCCTTTTCTaGACTCTTTTTCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLCTTLF*TLFPLL
Trigger: AAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCGATTTTCTTCGTCTTTaGTGCTGCACGACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLDFLRL*CCTTLF
Trigger: GAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATC...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATTTTCCAGAATGTGGCTaGCTGCTAAAATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYFPECG*LLKYPG
Trigger: ACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAA...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGGAAGGAAGCAGCTATaGGCTCATTCAGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFGRKQL*AHSVLF
Trigger: AAACAGAACTGAATGAGCCCATAGCTGCTTCCTTCC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAGTACTCAGATGGCTTaGGGCTTTGAGATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSTQMA*GFEIGS
Trigger: AGAGCCAATCTCAAAGCCCCAAGCCATCTGAGTACT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTAGGCTCACTCAAGAAGTaGCTGTGGGATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: CNCIWEPITVLLQANSVLGSLKK*LWDQES
Trigger: AGACTCTTGATCCCACAGCCACTTCTTGAGTGAGCC...TAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AGTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAATTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: SQGILLLPNPGLFGDKAQLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...TTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCATGTATCTGATGTGGTaGCTCCCAGAGGGATTGCAA +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSMYLMW*LPEGLQ
Trigger: TTGCAATCCCTCTGGGAGTCACCACATCAGATACAT...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQATSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGGCCAGAGGCCAATTGTaGCCACAAGTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLARGQL*PQVLFL
Trigger: AAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGC...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAACAATGTACCCTTaGCAGCAGGGAGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCSTMYP*QQGETS
Trigger: AGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGA...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAACATGTTATGGACATaGGGAATCCTTGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSNMLWT*GILVPG
Trigger: GCCTGGGACAAGGATTCCTCATGTCCATAACATGTT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406341.5
CDS-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCGACATTTGCAGTGAGTaGGATGATCAAAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSDICSE*DDQSAF
Trigger: GAAGGCACTTTGATCATCTCACTCACTGCAAATGTC...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR TCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: VLYICTVLISESFFILVSSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GGGCAGTCATGTCTATACTTTGGGGAAAACACCAATTGTAAGATTAACTGCTCTCTCTATATGACTTGCTaGAAGCACAAGACCTGTATG +
Preference number: 4 (lower is better)
Translates to: GQSCLYFGENTNCKINCSLYMTC*KHKTCM
Trigger: CATACAGGTCTTGTGCTTTCAGCAAGTCATATAGAG...AGAGCAGTTAATCTTACAATTGGTGTTTTCCCCAAAGTATAGACATGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR GCA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: PTLCGVLGMVTFETELLTKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIISTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMISTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTTGGGCTCAACAAGTCTaGATTGTCTTTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: VLYICTVLISESFFILVSWAQQV*IVFADT
Trigger: AGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCA...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTATATTCTCTTGAGGTCTaGAGTGAGATGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLYSLEV*SEMKKC
Trigger: GCACTTCTTCATCTCACTGCAGACCTCAAGAGAATA...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAAGGTGTGTGCTGTGTTaGTGTATACAACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILRCVLC*CIQHSG
Trigger: TCCACTGTGTTGTATACAGCAACACAGCACACACCT...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCGCGTTCTGTACATCTaGACTGTACTGATTAGTGAA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFRVLYI*TVLISE
Trigger: TTCACTAATCAGTACAGTGCAGATGTACAGAACGCG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCTTCCCAGCTGTAACTaGATTTGGGAACCAATAACT +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFLPSCN*IWEPIT
Trigger: AGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAGTTTCCAGGTCTCAGTaGAGTAGTTCGATAACTGTA +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLVSRSQ*SSSITV
Trigger: TACAGTTATCGAACTACTGCACTGAGACCTGGAAAC...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATTCCTTGGAAGATTGCTaGCAGTGCTGTTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDSLEDC*QCCFQN
Trigger: ATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGA...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTAACCGAAACACCATTTaGTTGTCAACAATGTACCCT +
Preference number: 4 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSNRNTI*LSTMYP
Trigger: AGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTT...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 4 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGAACAAGTCTaGTTCAGTAATCCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TLPSCNCIWEPITVLLQANSEQV*FSNPVK
Trigger: CTTCACAGGATTACTGAAGCAGACTTGTTCTGAATT...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTGTAGTGTTTGGGGGTaGTGCAAATTAACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMICSVWG*CKLTGN
Trigger: ATTCCCCGTTAATTTGCACCACCCCCAAACACTACA...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAATGAAGAAGTGCCTCTaGAATCTGATGGGCTTACCG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSMKKCL*NLMGLP
Trigger: CGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCAT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: EPLLTETPFACQQCTLDSSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACTCAAGAAGTGGCTGTaGGATCAAGAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSLKKWL*DQESEL
Trigger: CAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTTGTCTACTTCCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLSTSS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGGAAGTAGACAA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VQVPSFTILAYFLVILRQTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAGTACTCAAGCTCTCATaGTCACTGGATACAGTTACT +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLVLKLS*SLDTVT
Trigger: AGTAACTGTATCCAGTGATCATGAGAGCTTGAGTAC...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413704.5
CDS-3UTR TCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGGTGGGATCAAGAGTCTaGACTGGACCTGAACATATT +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLVGSRV*TGPEHI
Trigger: AATATGTTCAGGTCCAGTTCAGACTCTTGATCCCAC...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACCTCTCGAAATGCCTTaGTTTTCTTCGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSPLEMP*FSSSLV
Trigger: CACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663774.1
CDS-3UTR GCA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: PIIMSGIHALLINCWTSLKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATTTGGGGTATTTAGATaGAGCACGGTTGACATGGGA +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSFGVFR*STVDMG
Trigger: TCCCATGTCAACCGTGCTGCATCTAAATACCCCAAA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATCAACAGGGCACTCTTaGTTCTCTGCTTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSSTGHS*FSALSF
Trigger: GAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTCCATTGACCTCAAATTaGTGTCGTAACATGACTTTC +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLPLTSN*CRNMTF
Trigger: GAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: SSPTGVSEVVVVISTSELLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATTCTGGTTTTTCTTCTaGATTGTCTACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTFWFFF*IVYFLM
Trigger: CATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGGACAGAGACCATACATaGCTTGCAAAGTCTAAATAT +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLDRDHT*LAKSKY
Trigger: ATATTTAGACTTTGCAAGCCATGTATGGTCTCTGTC...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCTTCTCATTAACTGCTaGACTAGCCTCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLLLINC*TSLHRF
Trigger: GAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTGTATACAACACAGTaGAAGGAGAAAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLLYTTQ*KEKAPH
Trigger: ATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAG...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPSCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CCA 90 bp TGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAGCTGTAACTGCATTTaGGAACCAATAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: CCRNMTFPRYSIIRVSKASCNCI*EPITVL
Trigger: TAACACAGTTATTGGTTCCCAAATGCAGTTACAGCT...GGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATCGATAACTGTATCCTaGAGACTGTGTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSSITVS*RLCRMS
Trigger: GGACATCCTACACAGTCTCCAGGATACAGTTATCGA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGTCAGAGTTCCTGTGCTaGACTGAGAAACTGAATCTG +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLSEFLC*TEKLNL
Trigger: CAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCTAACAGTACTCAGATaGCTTGGGGCTTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLLTVLR*LGALRL
Trigger: CAATCTCAAAGCCCCAAGCCATCTGAGTACTGTTAG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCCAGATACCTGCTTTTaGAATGGTTGTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWPDTCF*NGCLRM
Trigger: CATCCTAAGACAACCATTCCAAAAGCAGGTATCTGG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATTGGACTTTCACATCCTaGTGTAGTGCCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINWTFTS*CSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
3UTR CAA 72 bp ATAGTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGTTCAAGCGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: IVSKIVGLPTNS*LECRCCSSAFC
Trigger: ACAGAACGCGCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTATGGGATGGTAACATTTaGAACAGAGTTGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILWDGNI*NRVANF
Trigger: GAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCA...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAGGTACAGATGATGTTTaGGTCATCCCTTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSGTDDV*VIPSSK
Trigger: CTTAGAAGAAGGGATGACTCAAACATCATCTGTACC...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATAGGCATACATCAAGTTaGACTCTGTCCGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINRHTSS*TLSEMP
Trigger: AGGCATTTCGGACAGAGTTCAACTTGATGTATGCCT...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAATTGCTGTCGTAACATaGCTTTCCCACGATACTCTA +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSIAVVT*LSHDTL
Trigger: TAGAGTATCGTGGGAAAGTCATGTTACGACAGCAAT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR TCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCATGGTTGTCTTAGGATaGACATTTACATACCTACCT +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLMVVLG*TFTYLP
Trigger: AGGTAGGTATGTAAATGTTCATCCTAAGACAACCAT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGAGTCTGAACTGGACCTaGACATATTCAAAACACCAG +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLSLNWT*TYSKHQ
Trigger: CTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACT...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSPELSRLPASVGVTKLLGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR GCA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGAGCTACTATTCTCATTaGTTTGGTATAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSYYSH*FGIGAE
Trigger: CTCAGCACCTATACCAAAGCAATGAGAATAGTAGCT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAAAGGTATCCTACTTTTaGCAAATCCAGGTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILKVSYF*QIQVFS
Trigger: CGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTCTACTCAAATAATCTaGTCCCGAATAATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFSTQII*SRIIKS
Trigger: GCTCTTGATTATTCGGGAGCAGATTATTTGAGTAGA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GACTTCCATTTCTTTAATGGGCTCAACAAGTCTGCATTGTCTTTGCAGATACTAAGAACAGGCCTCATATaGTTCAGACAGTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: DFHFFNGLNKSALSLQILRTGLI*FRQSLY
Trigger: ATACAAAGACTGTCTGAAGCATATGAGGCCTGTTCT...TAGTATCTGCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FACQQCTLDSREKLLYSLTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTACTTCTTGTGATTGCTaGTCATTATTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCTSCDC*SLFSSE
Trigger: TTCAGAGGAGAATAATGACCAGCAATCACAAGAAGT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTCTTCCTCATGATCACTaGATACAGTTACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SPELSRLPASVGVTKLLLLPHDH*IQLLFL
Trigger: CAGAAAAAGTAACTGTATCCAGTGATCATGAGGAAG...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATATCTCCACTTCTGCTTaGGAAACCAGTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINISTSA*ETSLRS
Trigger: ACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGAT...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp TTAATCAGGGATGTCATTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTAATTGGTTTCAGAAATaGCCAACAGTCTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LIRDVIQPRNLVQLLCFANWFQK*PTVSVS
Trigger: TGATACAGAGACTGTTGGCCATTTCTGAAACCAATT...AGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAATGACATCCCTGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATTCTGGAACTTCTTGTaGTTGCTGGTCATTATTCTC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSFWNFL*LLVIIL
Trigger: GAGAATAATGACCAGCAATCACAAGAAGTTCCAGAA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAACATCTGCACTGTACTaGTTAGTGAAAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSTSALY*LVKASS
Trigger: TGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWTSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATAACATCTCTACACCATTaGATTTTGAGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIITSLHH*ILSRRA
Trigger: TGCTCTTCTACTCAAAATTCAATGGTGTAGAGATGT...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCGGAACTTCTTGTGATTaGTGGTCATTATTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSGTSCD*WSLFSS
Trigger: AGAGGAGAATAATGACCAGCAATCACAAGAAGTTCC...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: TPFACQQCTLDSREKLLYKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTAAGCTTTACTATCCTTaGCTATTTCTTGGTGATCTT +
Preference number: 4 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFKLYYP*LFLGDL
Trigger: AAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCTCCCATAATTATGAGTaGAATACACGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSSHNYE*NTRSSH
Trigger: ATGAGAAGAGCGTGTATTCCACTCATAATTATGGGA...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAAACAGTATTCTTGGTaGACACACATTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSKQYSW*THIGQI
Trigger: TATCTGGCCAATGTGTGTCCACCAAGAATACTGTTT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR TCA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATAGTCTCTTCTCTATATaGCTTGCTGAAAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: LHLGTNNCVITGQFSLINSLFSI*LAESTR
Trigger: TCTTGTGCTTTCAGCAAGTCATATAGAGAAGAGACT...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAATACTCATAATCAAATaGTATGGTGACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSILIIK*YGDLSI
Trigger: GATGCTGAGGTCACCATAGCATTTGATTATGAGTAT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCTTCTTTATAGTCTCTaGTTCAGACAAGATTTACAG +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWLLYSL*FRQDLQ
Trigger: CTGTAAATCTTGTCTGAAGCAGAGACTATAAAGAAG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CCA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAATTGGTTTCAGAAATaGCCAACAGTCTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSNWFQK*PTVSVS
Trigger: TGATACAGAGACTGTTGGCCATTTCTGAAACCAATT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000665872.1
ENST00000666307.1
CDS-3UTR GCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGAAGTTTTCAAAAGCATaGATGATGGCTTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLKFSKA*MMASTF
Trigger: AAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTT...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR GCA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCCTAATGAAATTTATTaGCAAAAGCTGGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLPNEIY*QKLVSS
Trigger: GCTACTTACCAGCTTTTGGCAATAAATTTCATTAGG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp AGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTGCCGGCACTACTGTGTaGGCGGACTGGCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: SLHRFRAAERGVSPREATAGTTV*ADWRDW
Trigger: CCAGTCCCGCCAGTCCGCCAACACAGTAGTGCCGGC...AGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CAA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PHAASEDLGDAPSFSESFPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGACCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp CTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: LHRFRAAERGVSPREATLCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...CAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CAA 90 bp GAGGATCCCTGCACACCATGGGCACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: EDPCTPWAPVSETELLLPCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...AGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: ASTDSGQLSGEFPLEKPLPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...GAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: GLSLLGHPHAASEDLGDATCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...AGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: GPPSRCFGGPWGCSLLLGAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...TCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: PALLTGAECAIRQKGPSTGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCAAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: PQGHQVGTVSPSEFGLSPRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...TGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTAGCCTCCACAGATTCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: LASTDSGQLSGEFPLEKPHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...TGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CAA 90 bp GTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: VRAVSTAFLYRRRQAIQVDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...GACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCACCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGCTCAATTTCAGTGTCTaGTCCCAGGCGCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQALNFSV*SQALPG
Trigger: CCCCGGCAGCGCCTGGGACAAGACACTGAAATTGAG...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGAACGAGGCAGACAGTCTTTGTATaGAGGCTGTGGACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VSTAFLYRRRQAIQVRTRQTVFV*RLWTLA
Trigger: GGCCAAGGTCCACAGCCTCAATACAAAGACTGTCTG...CCTCGTTCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS TCA 90 bp TGTGGTGGCAGCAGAAGGCCATGGGCTCACCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: CGGSRRPWAHLSLSL*CYSPMWERALPFGP
Trigger: TGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGGTGAGCCCATGGCCTTCTGCTGCCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459941.1
ENST00000486465.5
ENST00000682236.1
CDS-3UTR CAA 90 bp CCAGCGCTTCTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: PALLTGAECAIRQKGPSTSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...CGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGCGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: VTLPCGRGLSLLGHPHAARGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PQGHQVGTVSPSEFGLSPPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...TGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: SFRVRAVSTAFLYRRRQANCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...GGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGACCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGACCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402198.7
ENST00000406341.5
CDS-3UTR CAA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCACCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGAGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: AELVLYREIRLFGRGLEGPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: VTILPAVHWPASDALVFGCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTCTCAATTTCAGTGTCTaGTCCCAGGCGCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: VEGESSSSQLSVALLSPPLNFSV*SQALPG
Trigger: CCCCGGCAGCGCCTGGGACAAGACACTGAAATTGAG...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCAGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTATTGAGGCTGTGGACCTaGGCCATTCTCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: SGQLSGEFPLEKPLWAGLLRLWT*AILPEM
Trigger: CATTTCTGGGAGAATGGCCAAGGTCCACAGCCTCAA...TAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS TCA 90 bp CTCAGCACTAGGCATGAACTGTACAGGACTCGGCTCATGTGTCCCTaGATGTGGTGGCAGCAGAAGGCCATGGGCTCACCTGAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LSTRHELYRTRLMCP*MWWQQKAMGSPESF
Trigger: GAAAGACTCAGGTGAGCCCATGGCCTTCTGCTGCCACCACATTCAGGGACACATGAGCCGAGTCCTGTACAGTTCATGCCTAGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459941.1
ENST00000486465.5
ENST00000682236.1
CDS-3UTR CAA 90 bp GGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: GRGLSLLGHPHAASEDLGTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...CCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: SPSEFGLSPQRSSTGDGRNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...CCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: AELVLYREIRLFGRGLEGHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: RAAERGVSPREATLGWFRPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...TCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415650.5
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CAA 90 bp TGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCCTCACCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: CDVTLPCGRGLSLLGHPHPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...GTGAGGGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGACACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCTGCAGACTTGCTTTTGCTCTGTGCAGAGTCACCTCCCCCACCAGCAGAATTTCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PADLLLLCAESPPPPAEFLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...AAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGCAGCTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: GQLSGEFPLEKPLWAGLDLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...GTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: VEGESSSSQLSVALLSPPLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCTGGGGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGACATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: SWGLFEPELGGGGVTGDRHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...TCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: PHAASEDLGDAPSFSESFFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGCTCGAGGCGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: GFLSPTRGDPRYSPSARGDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...GCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATGGAATTTAAAAAGATaGTGTACCCCACCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRWNLKR*CTPPGL
Trigger: CAGCCCAGGTGGGGTACACAATCTTTTTAAATTCCA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VTILPAVHWPASDALVFGLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS CCA 90 bp GTGGTAGCCCAAATGAGCATAAGTGGGCTGGAACCTAGCATGCGGTaGAGCCCAACTGCATCAGAAACTGACTCACCTCAACTCAGCACT +
Preference number: 5 (lower is better)
Translates to: VVAQMSISGLEPSMR*SPTASETDSPQLST
Trigger: AGTGCTGAGTTGAGGTGAGTCAGTTTCTGATGCAGTTGGGCTCCACCGCATGCTAGGTTCCAGCCCACTTATGCTCATTTGGGCTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459941.1
ENST00000486465.5
ENST00000682236.1
CDS-3UTR CAA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCTCTGTGATGTTACTCTCCCATGTGGGAGAGGGCTCTCCCTTTTGGGCCACCTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: FSVMLLSHVGEGSPFWATFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...GGTGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCAGATCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: RAVSTAFLYRRRQAIQVRSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...TCTGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: GTVSPSEFGLSPQRSSTGRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...GCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACCAGGCCCTCTTCCATTCACTACCAAGACAGGATACCCTCACTCAAGAAGTGGCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: TRPSSIHYQDRIPSLKKWLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...CCACTTCTTGAGTGAGGGTATCCTGTCTTGGTAGTGAATGGAAGAGGGCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp CCTCACGCTGCTTCGGAGGACCTTGGGGATGCTCCCTCCTTCTCGGAGTCGTTCATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: PHAASEDLGDAPSFSESFIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...GAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: APSSWCRFQALLSLPISWGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: GVLGMVTFETELLTSDSGRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAGCCGGCACTACTGTGTaGGCGGACTGGCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPAGTTV*ADWRDW
Trigger: CCAGTCCCGCCAGTCCGCCAACACAGTAGTGCCGGC...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402198.7
CDS-3UTR CAA 90 bp GTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGCCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: VQFLLQSSGCLHSVPLQAPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...CGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGGGTAGTGCTGTGAATTGGAAACCGCAGATACCCTGGAGGCCTGGTAGACAGCCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: VGSAVNWKPQIPWRPGRQPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...CTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GGCTCCAGGGCTCCTCCAGGGGTGTACAACAGGCACAATGCACTGATGGGGAGATTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: GSRAPPGVYNRHNALMGRLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...TCTCCCCATCAGTGCATTGTGCCTGTTGTACACCCCTGGAGGAGCCCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGAAGGGCAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: ILSEDYHTAGAGSCIWKGKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...GCCCTTCCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTCAACCCAGAAATCTGGTACAGTTGCTTTGCTTTGCTGAAGGGGGAAGAATCCTGCCCCCTAGGCCCCTaGGGTCTCTTTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: FNPEIWYSCFALLKGEESCPLGP*GLFRWT
Trigger: AGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCA...GGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCTGGGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CAA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCATCTTCTCTATATGACTaGCTGAAAGCACAAGACCTG +
Preference number: 5 (lower is better)
Translates to: QSSGCLHSVPLQATAGHSSSLYD*LKAQDL
Trigger: CAGGTCTTGTGCTTTCAGCAAGTCATATAGAGAAGA...TGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQASNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGAAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: SHEGLMSISTSAWETSLRSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGCCAGCTGGGGACTCTTaGAGCCTGAATTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKPAGDS*SLNWEG
Trigger: CCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGG...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp TGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGCTGAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: CSPQDLPVLLNTSDSSQLNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...CAGCTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCAAGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: LQGQRPIVTTSLVSCPPDPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...GTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAATTATGAGTCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: SIRQSSTPMPLSGPIIMSHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...ACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGACTCTTTGAGCCTGAATTGGGAGGGGGTGGTGTGACTGGAGACAGAGGCCGATTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: GLFEPELGGGGVTGDRGRLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...TCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGAGGGCTCTCCCTTTTGGGCCACCCTCACGCTGCTTCGGAGGACCTTGGGGATATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: RGLSLLGHPHAASEDLGDILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...ATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGGACATGAGGAATCCTaGTCCCAGGCGCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTGHEES*SQALPG
Trigger: CCCCGGCAGCGCCTGGGACAAGGATTCCTCATGTCC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406341.5
CDS-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTGCCAGAGAAACAATaGTTAACAGCCTATGCAGAC +
Preference number: 5 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLPEKQ*LTAYAD
Trigger: GTCTGCATAGGCTGTTAACAATTGTTTCTCTGGCAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RGVSPREATLGWFRLRTIFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...AATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGTCCCTCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: FLCWTEKLNLRLASLRVPLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GCTGAACTGGTCCTGTACCGAGAAATTCGACTCTTCGGCCGGGGCCTAGAAGGCAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: AELVLYREIRLFGRGLEGKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...GCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: FSFRVRAVSTAFLYRRRQLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...CTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: APSSWCRFQALLSLPISWPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp AGTTTCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: SFSRGSDVHLHFCLGNQSPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...AGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGACCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp GTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACAGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: VHDLLMNRASLPKVRASTGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...TGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTGAGATGAGCCAGGTGTGGCCAGCTGGGGACTCTTTGAGCCTGAATTGGGAGTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: GEMSQVWPAGDSLSLNWESEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...CTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
CDS-3UTR CAA 90 bp CACCAGTGTCGGAAACGGAGTTACTGCTGCCTTGCCCAGCTCCTGCAGACTTGCTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: HQCRKRSYCCLAQLLQTCSEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665872.1
CDS-3UTR CAA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCGACGGCAGGCCATTCAGGTCATCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: FGLSPQRSSTGDGRPFRSSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...TGACCTGAATGGCCTGCCGTCGCCTGTAGAGGAACGCTGTGGAGACAGCCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGAGTCGGTACTGGTGCACACCCCCACTCCCACGGTGTGGGTAGTGCTGTGAATTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: GVGTGAHPHSHGVGSAVNSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...ATTCACAGCACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQADLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TGCTCCCTCCTTCTCGGAGTCGTTCTACTGATGTGGGAACCATCCACCTACTGCAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: CSLLLGVVLLMWEPSTYCRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...GCAGTAGGTGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CTGGAATTAGTCCTAGACTCCCCAGCAGTATTTACGGGCAGTCATGTCTATACTCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LELVLDSPAVFTGSHVYTLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...AGTATAGACATGACTGCCCGTAAATACTGCTGGGGAGTCTAGGACTAATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CAA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCTGCCTGGAATAGACTaGGCTTCTGGGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVLPGID*ASGGVL
Trigger: CAGCACACCCCCAGAAGCCAAGTCTATTCCAGGCAG...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AATCTCTACATCAGAGTTGCTCTGTTCCAAGGGCTGATCCCGCCGCTTCTTTCTTTGAGGCTGTGGACCTaGGCCATTCTCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: NLYIRVALFQGLIPPLLSLRLWT*AILPEM
Trigger: CATTTCTGGGAGAATGGCCAAGGTCCACAGCCTCAA...AGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCGTGGCAGAAGAGAGGTaGGTCTTGATTTTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPVAEER*VLIFFV
Trigger: GACGAAGAAAATCAAGACCAACCTCTCTTCTGCCAC...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS TCA 90 bp GACTTCATCACATCAAATAATCTACATGCAGCATCCTCATGTACGTaGTGCCAGTGGAGGAGGGCAATGGCAGACACTGAGGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: DFITSNNLHAASSCT*CQWRRAMADTEEGS
Trigger: GCTGCCTTCCTCAGTGTCTGCCATTGCCCTCCTCCACTGGCATCACGTACATGAGGATGCTGCATGTAGATTATTTGATGTGATGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476740.2
CDS TCA 90 bp GAGACCGTCGTGGCCAACATGGTGAAACTCCGTCTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCATCTATAACCTCTTCTTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ETVVANMVKLRLLLL*ARFSWSSITSSFSS
Trigger: AGAAGAGAAAGAAGAGGTTATAGATGACCAGGAGAACCTAGCTCATAGCAGGAGGAGACGGAGTTTCACCATGTTGGCCACGACGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684606.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: VEGESSSSQLSVALLSPPLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...AGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GCCATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: AILRKTTRTPGRYSFSFRTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...TCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGGATCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: TGAECAIRQKGPSTSLRDLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...ATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQANCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: APSSWCRFQALLSLPISWHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGACATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTGGAGTTACTGCTGCCTaGCCCAGCTCCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAGVTAA*PSSCRL
Trigger: AAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCC...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGACCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: YPPSKCKGFLSPTRGDPRPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...TCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGCCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000665872.1
CDS-3UTR CAA 90 bp AACTTCGTCATGAGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: NFVMSIRQSSTPMPLSGPLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...GGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTCATGACGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443339.5
CDS-3UTR CAA 90 bp CTGTGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LCFRGRILDFLRLWCCTTKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...GGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665872.1
CDS-3UTR CAA 90 bp GTTCCTCAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 5 (lower is better)
Translates to: VPQQYARPRFQRQLEGSSLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...GCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGCTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: APSSWCRFQALLSLPISWLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp AGGGGAATTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTACAGTTGCTTTGCTTaGCTGAAGGGGGAAGAATCC +
Preference number: 5 (lower is better)
Translates to: RGIRATPTSLKKWLWDQEYSCFA*LKGEES
Trigger: GGATTCTTCCCCCTTCAGCAAAGCAAAGCAACTGTA...CTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAATTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CAA 90 bp CATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATCCACACACCAGACAGTCTTTGTATaGAGGCTGTGGACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HDLLMNRASLPKVRASTHQTVFV*RLWTLA
Trigger: GGCCAAGGTCCACAGCCTCAATACAAAGACTGTCTG...GTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTTACAGGAGCTGAATGTGCCATCAGGCAGAAGGGGCCTTCGACGTCTCTCAGGCTCAATTTCAGTGTCTaGTATGAGAATGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: LTGAECAIRQKGPSTSLRLNFSV*YENECG
Trigger: GCCACATTCATTCTCATACAAGACACTGAAATTGAG...CCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAACAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGAAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CTGTGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: LCFRGRILDFLRLWCCTTTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...GGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443339.5
ENST00000665872.1
CDS-3UTR CAA 90 bp TACATCAAGTTGAACTCTGTCCGAAATGCCTGGTCTGAGTTTCTCACGAGGGTCACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: YIKLNSVRNAWSEFLTRVTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...GACCCTCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCACAGCGTTCCTCTACAGGCAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: GTVSPSEFGLSPQRSSTGKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...GCCTGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGATTCAGGGAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: VEYTLFSLTAGLASTDSGNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...CCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGACCCAGGACTGCCTCCTaGTCACTGAAGTCTCAGTTT +
Preference number: 5 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRPRTAS*SLKSQF
Trigger: AAACTGAGACTTCAGTGACAAGGAGGCAGTCCTGGG...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp GTCCTAGACTCCCCAGCAGTATTTACGGGCAGTCATGTCTATACTTTGGGGAAACCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: VLDSPAVFTGSHVYTLGKPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...TTTCCCCAAAGTATAGACATGACTGCCCGTAAATACTGCTGGGGAGTCTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CAA 90 bp CCCATAATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PIIMSGIHALLINCWTSLHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...GAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACTCTTCCCAGCTGTAACTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCCATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: TLPSCNCIWEPITVLLQAHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...GGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTCGGGCTGTCTCCATTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: PQGHQVGTVSPSEFGLSPFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...TGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGGAGGGGCTCCGTAATTATGATCAGCATAAGGCAGTCCTCGACACCCATGCCTCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: RRGSVIMISIRQSSTPMPLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...AGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431285.5
CDS-3UTR CAA 90 bp CTGAGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAATTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: LSGEFPLEKPLWAGLDSEFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...TTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CAA 90 bp CAGCAATATGCTCGGCCTAGGTTCCAGAGGCAGCTGGAAGGAAGCAGCTATGGGTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: QQYARPRFQRQLEGSSYGSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...CCCATAGCTGCTTCCTTCCAGCTGCCTCTGGAACCTAGGCCGAGCATATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp ACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACTGGACCTGTCTTCTCTATATGACTaGCTGAAAGCACAAGACCTG +
Preference number: 5 (lower is better)
Translates to: TPTSLKKWLWDQESELDLSSLYD*LKAQDL
Trigger: CAGGTCTTGTGCTTTCAGCAAGTCATATAGAGAAGA...CAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CAA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGACCCTCTCGAAATGCCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: SHEGLMSISTSAWETSLRPSRNA*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGGG...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
CDS GCA 90 bp GCCATCACCAACCCGTACTGCTCTCTTTGTGACAAATTGGGTGAGTaGAGCATGCCAGAAGGGCAAAATGAGTGGTTAATTATGGGCTAT +
Preference number: 5 (lower is better)
Translates to: AITNPYCSLCDKLGE*SMPEGQNEWLIMGY
Trigger: ATAGCCCATAATTAACCACTCATTTTGCCCTTCTGGCATGCTGCACTCACCCAATTTGTCACAAAGAGAGCAGTACGGGTTGGTGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459941.1
ENST00000682236.1
CDS-3UTR CAA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGATTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: SGRRKLLIPAFCCTAIPTLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...GGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGAAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAAGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCAACACTCTGTGGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: PTLCGVLGMVTFETELLTHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...AGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCCACAGAGTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AACAATATCCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: NNIPHPNVKASYPPLEEIHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...GATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCGGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTAATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: SGEFPLEKPLWAGLDSELIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...TAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAGAGGGCTCTCCCTTTaGGGCCACCCTCACGCTGCT +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSRGLSL*GHPHAA
Trigger: AGCAGCGTGAGGGTGGCCCAAAAGGGAGAGCCCTCT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACATCCCAGCTTTCTGTaGCACTGCTATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTHPSFL*HCYPHL
Trigger: CAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: PHPSFLLHCYPHLICCPAFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCAGAGTTCCTGTGCTGGACTGAGAAACTGAATCTGAGGTTGGCGAGTCTGAGGTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: SEFLCWTEKLNLRLASLRFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...CCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGGAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQALFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp AAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAGTCCATCTGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: KCKGFLSPTRGDPRYSPSDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...AGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: EPLLTETPFACQQCTLDSPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTAAACTGAATCTGAGGTaGGCGAGTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAAKLNLR*ASLRVP
Trigger: AGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTT...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACCAGGCACCCTCCAGTaGGTGCAGGTTCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQPGTLQ*VQVPSF
Trigger: AAAGCTTGGAACCTGCACCAACTGGAGGGTGCCTGG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATATGTTGTCCTGCTTCTTCTCTATATGACTaGCTGAAAGCACAAGACCTG +
Preference number: 5 (lower is better)
Translates to: PHPSFLLHCYPHLICCPASSLYD*LKAQDL
Trigger: CAGGTCTTGTGCTTTCAGCAAGTCATATAGAGAAGA...AGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTAGAGCAACACCCACCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACAGAAATCTGGTACAGTaGCTTTGCTTTGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LEQHPPHSRSGCGIKSLNRNLVQ*LCFAEG
Trigger: CCCTTCAGCAAAGCAAAGCAACTGTACCAGATTTCT...GTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGGTGGGTGTTGCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS-3UTR CAA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACTGCCAGAGAAACAATaGTTAACAGCCTATGCAGAC +
Preference number: 5 (lower is better)
Translates to: VAPLESAELNVSGPSPSALPEKQ*LTAYAD
Trigger: GTCTGCATAGGCTGTTAACAATTGTTTCTCTGGCAG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GAACTTCTTGTGATTGCTGGTCATTATTCTCCTCTGAAGCCTCATTCTGCTGCTTTGAGGCTGTGGACCTaGGCCATTCTCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: ELLVIAGHYSPLKPHSAALRLWT*AILPEM
Trigger: CATTTCTGGGAGAATGGCCAAGGTCCACAGCCTCAA...AGCAGCAGAATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS GCA 90 bp ATCCAGCGCTGTAATTGTGTTCTCTTAAGATATACAGTTGTAGGTTaGTCACCACTCTGTGGCTCTCCTGCCCTTCTTACAGGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: IQRCNCVLLRYTVVG*SPLCGSPALLTGAE
Trigger: TTCAGCTCCTGTAAGAAGGGCAGGAGAGCCACAGAGTGGTGAGCAACCTACAACTGTATATCTTAAGAGAACACAATTACAGCGCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478961.6
CDS CCA 90 bp TATGCAAAGACAGCATCTCAATGGCAAAGGATGACCAGGACAATTTaGGACCCAGAACACACTCCTATGGCTAGAGACCAGCAATTTCTC +
Preference number: 5 (lower is better)
Translates to: YAKTASQWQRMTRTI*DPEHTPMARDQQFL
Trigger: GAGAAATTGCTGGTCTCTAGCCATAGGAGTGTGTTCTGGGTCCCAAATTGTCCTGGTCATCCTTTGCCATTGAGATGCTGTCTTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492939.5
CDS-3UTR CAA 90 bp GAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCACTGCTATCCCCACCTGATACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: EGESSSSQLSVALLSPPDTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...ATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAAAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: EPLLTETPFACQQCTLDSFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCCCCATCCAAATGTAAAGGCTTCCTATCCCCCACTAGAGGAGATCCTCGATACAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: PPSKCKGFLSPTRGDPRYKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...GTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATTATGAGTGGAATACACGCTCTTCTCATTAACTGCTGGACTAGCCTCCACAGAAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: IMSGIHALLINCWTSLHRRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...TCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCACTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: SPIHLLHLNQAFSTTESALFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTCAAGGTATCCTACTTTTGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCAAACCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: VKVSYFCQIQVFSVTKLKPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...TTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCACCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: SPIHLLHLNQAFSTTESAPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AGGCCAGAGGCCAATTGTGACCACAAGTCTTGTTTCTTGTCCACCAGACCCAATTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: RPEANCDHKSCFLSTRPNFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...ATTGGGTCTGGTGGACAAGAAACAAGACTTGTGGTCACAATTGGCCTCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: VLHDPFLDSFSASWVWFFLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...GAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: VTILPAVHWPASDALVFGFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...CCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTCCCAGTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: SCSPQDLPVLLNTSDSSQSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...CTGGGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACCAAAGCCAAATCTCTaGCAGCCCTCAGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTPKPNL*QPSGSS
Trigger: GGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TATGTTGTCCTGCTTCCGCCGATGAAGTCTAATAACCTTCCCCCTGCTCATTCCTTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: YVVLLPPMKSNNLPPAHSLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...GGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGGCGGAAGCAGGACAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAAATCTCTTGCAGCCCTCAGGATCTTCCGGTGCTTTTGAACACGAGTGACTCTTTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: QISCSPQDLPVLLNTSDSLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...AGAGTCACTCGTGTTCAAAAGCACCGGAAGATCCTGAGGGCTGCAAGAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGGAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTCCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 5 (lower is better)
Translates to: GEFPLEKPLWAGLDSELFLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...GAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 5 (lower is better)
Translates to: TILPAVHWPASDALVFGLLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACAAGTCTTGTTTCTTGTCCACCAGACCCAATCCTCTGGCACCTTGTACCCCCATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: HKSCFLSTRPNPLAPCTPILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...GGGGGTACAAGGTGCCAGAGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTCCAGCCCAGACCCTAATCCCTGGTACTGCCTGGAATAGACTTGGCTTCTGGAGTCATGTCTATACTTaGGGGAAAACACCAATTGTA +
Preference number: 5 (lower is better)
Translates to: FPAQTLIPGTAWNRLGFWSHVYT*GKTPIV
Trigger: TACAATTGGTGTTTTCCCCAAAGTATAGACATGACT...CCAGAAGCCAAGTCTATTCCAGGCAGTACCAGGGATTAGGGTCTGGGCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468208.2
CDS TCA 90 bp TCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTGAACTGGACCTaGACATATTCAAAACACCAGGATTTTTCCAGCCCAGACCCTAAT +
Preference number: 5 (lower is better)
Translates to: SHSRSGCGIKSLNWT*TYSKHQDFSSPDPN
Trigger: ATTAGGGTCTGGGCTGGAAAAATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS-3UTR CAA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTAGCAATATCCCCTGCTaGGGAAGACCTCCGGGTATT +
Preference number: 5 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFSNIPC*GRPPGI
Trigger: AATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCT...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCACCAGGTGACAAGGATCCACGAGAGAGGTCTTTCATTAAGCCATGTTCATATTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: PPGDKDPRERSFIKPCSYLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...ATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGGTGCTTGGGATGGTAACATTTGAAACAGAGTTGCTAACTTCAGATTCAGGGTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: GVLGMVTFETELLTSDSGLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAGCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: VLHDPFLDSFSASWVWFFSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...GAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: EPLLTETPFACQQCTLDSLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCACTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: VAPLESAELNVSGPSPSALNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACACATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTTGCTCCTTTAGAGAGTGCTGAGCTTAATGTCTCTGGGCCTTCTCCATCTGCAATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: VAPLESAELNVSGPSPSAIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...TGCAGATGGAGAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AGCATAAGGCAGTCCTCGACACCCATGCCTCTGAGTGGTCCCATAATTATGAGTATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: SIRQSSTPMPLSGPIIMSIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...ACTCATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGACCTCAGAGACTTTTCTaGACCAACCAATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRPQRLF*TNQSRV
Trigger: CACTCTAGATTGGTTGGTCAAGAAAAGTCTCTGAGG...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTCTTTATAGAAAGAGTTaGCCGACTCCTGCTCTACAT +
Preference number: 5 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPLYRKS*PTPALH
Trigger: ATGTAGAGCAGGAGTCGGCAAACTCTTTCTATAAAG...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AGAGTTTGCCGACTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGGAGACCATACATGGCTaGCAAAGTCTAAATATTTAC +
Preference number: 5 (lower is better)
Translates to: RVCRLLLYMICPLSPSYRETIHG*QSLNIY
Trigger: GTAAATATTTAGACTTTGCAAGCCATGTATGGTCTC...CCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAGTCGGCAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp GAGTTTCCCCTAGAGAAGCCACTCTGGGCTGGTTTAGACTCAGAACTATTCTTCCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: EFPLEKPLWAGLDSELFFLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...GAAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGGAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431285.5
ENST00000666307.1
CDS-3UTR CAA 90 bp GCACCCTCCAGTTGGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: APSSWCRFQALLSLPISWFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...CCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACCAACTGGAGGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: FVFGAARPFSGLFFRFLGFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...ACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGTGATTCTGTCCGAGGACTATCACACTGCAGGAGCTGGTAGCTGTATCTGGTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: FVILSEDYHTAGAGSCIWFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...CCAGATACAGCTACCAGCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTELPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTCACGAGGGTCTGATGTCCATCTCCACTTCTGCTTGGGAAACCAGTCTCAGATCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: SHEGLMSISTSAWETSLRSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...TCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: GLDFLRLWCCTTLFWTLFHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...AAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp ATGAGCTTTTCTTCAAAGAGCCAGGCACCCTCCAGTTGGTGCAGGTTCCAAGCTATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: MSFSSKSQAPSSWCRFQAILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...AGCTTGGAACCTGCACCAACTGGAGGGTGCCTGGCTCTTTGAAGAAAAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ACAATTCTGCCTGCTGTGCATTGGCCTGCTTCTGACGCTTTAGTCTTTGGGCTGATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: TILPAVHWPASDALVFGLILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...CAGCCCAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAACAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCAGGGGCTTCAGTTTTaGTCTCTTCACCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYQGLQF*SLHQQE
Trigger: CTCCTGTTGGTGAAGAGACAAAAACTGAAGCCCCTG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTTTGCTGGAGGTGGCTaGGGGACTAGTTTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCFAGGG*GTSFSA
Trigger: TGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGAGGCCGAAGTAACTaGGTGACATTCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRGRSN*VTFCSI
Trigger: GATGGAGCAGAATGTCACCAAGTTACTTCGGCCTCT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCTCTTTGAGCCTGAATaGGGAGGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLLFEPE*GGGGVT
Trigger: AGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTACCACAGAGTCTGCAACGTTCAAGAATGAATTTCACTCACATCGTCCCAGGACAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LPQSLQRSRMNFTHIVPGQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...TCCTGGGACGATGTGAGTGAAATTCATTCTTGAACGTTGCAGACTCTGTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCATCTCCACTTCTGCTaGGGAAACCAGTCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFHLHFC*GNQSQK
Trigger: CTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCCTGCTCTACATGATCTGTCCCCTATCTCCCTCTTACAGGATCTTCTATCCTATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: LLLYMICPLSPSYRIFYPIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...AGGATAGAAGATCCTGTAAGAGGGAGATAGGGGACAGATCATGTAGAGCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATACCTGCAGACTTGCTTTaGCTCTGTGCAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIIPADLL*LCAESP
Trigger: AGGTGACTCTGCACAGAGCAAAAGCAAGTCTGCAGG...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACCAGCTCCTGCAGACTaGCTTTTGCTCTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSPAPAD*LLLCAE
Trigger: CTCTGCACAGAGCAAAAGCAAGTCTGCAGGAGCTGG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCCAACACAGCAGAGATaGGAAATCACGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFPTQQR*EITGSN
Trigger: ATTGGACCCCGTGATTTCCAATCTCTGCTGTGTTGG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTGCTGTATACAACACAGTGGAAGGAGAAAGCTCCTCATCCCAGCTTTCTGTTGCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: LLYTTQWKEKAPHPSFLLLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...CAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCACTGTGTTGTATACAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTGTGCTTCAGAGGGAGAATTCTTGATTTTCTTCGTCTTTGGTGCTGCACGACCTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LCFRGRILDFLRLWCCTTSEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...GGTCGTGCAGCACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGAAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000665872.1
CDS-3UTR CAA 90 bp GGGAGACGGAGGCTTCAACACAACTCATTGCACTTAGAACCGTTACTAACCGAATTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: GRRRLQHNSLHLEPLLTEFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...TTCGGTTAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAGCCTCCGTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTTTGGTGCTGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: SLVLHDPFLDSFSASWVWSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...CCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATCAGCACAGCTGTTAGTGTTGGAGTCAAGGTATCCTACTTTTGCCAAATCCAGAGGAATCATCTGCACTaGTCACAGTTGAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ISTAVSVGVKVSYFCQIQRNHLH*SQLRRK
Trigger: CTTCCTTCTCAACTGTGACAAGTGCAGATGATTCCT...CTGGATTTGGCAAAAGTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663774.1
CDS-3UTR CAA 90 bp TTCAAGAATGAATTTCACTCACATCGTCCCAGGACTGCCTCCTTGTCACTGAAGACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: FKNEFHSHRPRTASLSLKTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...CTTCAGTGACAAGGAGGCAGTCCTGGGACGATGTGAGTGAAATTCATTCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGCACGACCCTTTTCTGGACTCTTTTTCCGCTTCTTGGGTTTGGTTCTTCTAACAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: CTTLFWTLFPLLGFGSSNKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...GTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAGTCCAGAAAAGGGTCGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TGGAATTACAGGCATGATTCGCACCCAGCCAAAGGGCTGAATAGTTATGACAGACTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: WNYRHDSHPAKGLNSYDRLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...TCTGTCATAACTATTCAGCCCTTTGGCTGGGTGCGAATCATGCCTGTAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: SPIHLLHLNQAFSTTESANCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGCAGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: SPIHLLHLNQAFSTTESAAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...TGCAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTTCTTCTAAGGCTTGTTTTAGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: SLGVQMMFESSLLLRLVLAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...TAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACCCCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000413704.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTTTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCATTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: FGVHDLLMNRASLPKVRALPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCGATCTTCCGGTGCTTTaGAACACGAGTGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIDLPVL*NTSDSS
Trigger: GGAAGAGTCACTCGTGTTCAAAAGCACCGGAAGATC...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: EPLLTETPFACQQCTLDSKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATCACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATGGAATTTAAAAAGATaGTGTACCCCACCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPWNLKR*CTPPGL
Trigger: CAGCCCAGGTGGGGTACACAATCTTTTTAAATTCCA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGCAGACAGTCTTTGTATaGAGGCTGTGGACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLQTVFV*RLWTLA
Trigger: GGCCAAGGTCCACAGCCTCAATACAAAGACTGTCTG...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGGTGTACATGATCTTCTGATGAACCGAGCATCATTACCGAAAGTACGGGCAACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: FGVHDLLMNRASLPKVRATFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...TGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTTAGATGCAGCACGGTaGACATGGGATCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLDAAR*TWDPVI
Trigger: AATTACTGGATCCCATGTCAACCGTGCTGCATCTAA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMILNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTATTATACTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: PLTSNCCRNMTFPRYSIILNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...TATAATAGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTCAACAGGGCACTCTaGCTTCTCTGCTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLNRAL*LLCFVI
Trigger: AATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAACATGTTTAGGGTCGTaGCCAGTACAGTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSTCLGS*PVQLDP
Trigger: CGGATCCAACTGTACTGGCAACGACCCTAAACATGT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTGGAATGGTTGTCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: TVFLVDTHWPDTCFWNGCLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...ACAACCATTCCAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GAACCGTTACTAACCGAAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: EPLLTETPFACQQCTLDSIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...GCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTTCGGTTAGTAACGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACATTCCGCTTCTTGGGTTaGGTTCTTCTAACAGTTAAG +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTFRFLG*VLLTVK
Trigger: CTTAACTGTTAGAAGAACCAAACCCAAGAAGCGGAA...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCTTCACCAACAGGAGTCTCTGAGGTGGTTGTAGTAATCTCTACATCAGAGTTGTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: SSPTGVSEVVVVISTSELFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...CAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCTGTTGGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCAAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAAAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACTTGGTGGACACACATaGGCCAGATACCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSLGGHT*ARYLLL
Trigger: CAAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ATCCTGAGAAAGACCACAAGGACACCAGGTAGGTACAGTTTCTCCTTCAGAGTTATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: ILRKTTRTPGRYSFSFRVILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...AACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTTCTCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCTGCCAGAGAAACAATaGTTAACAGCCTATGCAGAC +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLPEKQ*LTAYAD
Trigger: GTCTGCATAGGCTGTTAACAATTGTTTCTCTGGCAG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAGAAGAGAGGTTGGTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: GAGSKLYYPCLFLGDLKTEERLV*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGACCAACCTCTCTTC...TGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666307.1
CDS-3UTR CAA 90 bp AAACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTCCCTCTCGAAATGCCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: KHHLLVNNVPLTAGRNFFPSRNA*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGGG...AAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000663774.1
ENST00000670063.1
CDS GCA 90 bp AAGGAAAGTTGCATGAAATCAAAGATGGCCATGGAGATGGAGCTATaGTGGTTGTATCTTACCCATCTCCAAACGGGTAAATATGAACAT +
Preference number: 5 (lower is better)
Translates to: KESCMKSKMAMEMEL*WLYLTHLQTGKYEH
Trigger: ATGTTCATATTTACCCGTTTGGAGATGGGTAAGATACAACCAGCATAGCTCCATCTCCATGGCCATCTTTGATTTCATGCAACTTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS CCA 90 bp GAAAGTTGCATGAAATCAAAGATGGCCATGGAGATGGAGCTATGCTaGTTGTATCTTACCCATCTCCAAACGGGTAAATATGAACATATG +
Preference number: 5 (lower is better)
Translates to: ESCMKSKMAMEMELC*LYLTHLQTGKYEHM
Trigger: CATATGTTCATATTTACCCGTTTGGAGATGGGTAAGATACAACCAGCATAGCTCCATCTCCATGGCCATCTTTGATTTCATGCAACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS-3UTR CAA 90 bp CCAGCCCCATCCATTTATTACATCTTAACCAAGCTTTTTCTACCACAGAGTCTGTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: PAPSIYYILTKLFLPQSLSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...CAGACTCTGTGGTAGAAAAAGCTTGGTTAAGATGTAATAAATGGATGGGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399686.6
CDS-3UTR CAA 90 bp AAATGCCCATTGACCTCAAATTGCTGTCGTAACATGACTTTCCCACGATACTCTTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: KCPLTSNCCRNMTFPRYSSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...AGAGTATCGTGGGAAAGTCATGTTACGACAGCAATTTGAGGTCAATGGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLNCRGV*QRLAVV
Trigger: TACTACTGCTAGTCGCTGCAACACTCCTCTACAGTT...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAGCACAGCTGTTAGTGTaGGAGTCAAGGTATCCTACT +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSAQLLV*ESRYPT
Trigger: AGTAGGATACCTTGACTCCAACACTAACAGCTGTGC...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCATCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPSEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp GACAAAGATAAACAGTATTCTTGGTGGACACACATTGGCCAGATACCTGCTTTTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: DKDKQYSWWTHIGQIPAFLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...AAAAGCAGGTATCTGGCCAATGTGTGTCCACCAAGAATACTGTTTATCTTTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: VLYICTVLISESFFILVSLPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTTTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTACTTAAGGGGTATGGTTTTTaGAAGAAATGCCCATTGACC +
Preference number: 5 (lower is better)
Translates to: SPELSRLPASVGVTKLLLKGYGF*KKCPLT
Trigger: GGTCAATGGGCATTTCTTCAAAAAACCATACCCCTT...AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCACACAAGTCTTGTTTCTaGTCCACCAGACCCAATCCT +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSHKSCF*STRPNP
Trigger: AGGATTGGGTCTGGTGGACAAGAAACAAGACTTGTG...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GGAAACTCACAGTATTATCTTGTCCAAAAGAAAAGAAGGTCCACTGCAGCACCACTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 5 (lower is better)
Translates to: GNSQYYLVQKKRRSTAAPLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...TGGTGCTGCAGTGGACCTTCTTTTCTTTTGGACAAGATAATACTGTGAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
CDS-3UTR CAA 90 bp AAGCGCGTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 5 (lower is better)
Translates to: KRVLYICTVLISESFFILLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...CAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp AAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTTCAAGCAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: KIVGLPTNSLLECRCCSSRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...GCTTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CGTAACATGACTTTCCCACGATACTCTATTATAAGAGTGTCCAAAGCCAAATCTAGATGGCTTGGGGCTTaGAGATTGGCTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: RNMTFPRYSIIRVSKAKSRWLGA*RLALLT
Trigger: AGTTAAAAGAGCCAATCTCAAAGCCCCAAGCCATCT...AGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATCTTCTCTATATGACTaGCTGAAAGCACAAGACCTG +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSSLYD*LKAQDL
Trigger: CAGGTCTTGTGCTTTCAGCAAGTCATATAGAGAAGA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGGTTACTGAGCTGTAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: SCLIPPFLVYLLHGLLSCKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...ACAGCTCAGTAACCCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ACACCATTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: TPFACQQCTLDSREKLLYKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...ATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAATGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTTCTGTACATCTGCACTGTACTGATTAGTGAAAGCTTCTTCATACTGGTCAGTAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: VLYICTVLISESFFILVSKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...ACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMIQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGCTCTTTTTCCGCTTCTaGGGTTTGGTTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWLFFRF*GLVLLT
Trigger: TGTTAGAAGAACCAAACCCAAGAAGCGGAAAAAGAG...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATTTCCCAGCCCTCAGTaGTATTCTCATCTAAATTCT +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQFPSPQ*YSHLNS
Trigger: AGAATTTAGATGAGAATACAACTGAGGGCTGGGAAA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTTGCCCACAAATTCCTaGCTAGAATGTAGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: LFFLFFWFFFWIVYFLMILPTNS*LECRCC
Trigger: ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAA...GATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCCTTCAACACAACTCATaGCACTTAGAACCGTTACTA +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLLQHNS*HLEPLL
Trigger: TAGTAACGGTTCTAAGTGCAATGAGTTGTGTTGAAG...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTTCTCCTGAACTGTCTAGACTTCCAGCTTCAGTAGGAGTTACTAAACTGTTAACATTTGAAACAGAGTaGCTAACTTCAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: FSPELSRLPASVGVTKLLTFETE*LTSDSG
Trigger: CCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGT...TAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413704.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCTCATGATCTCAACAAGTCTGCATaGTCTTTGCAGATACTAGAA +
Preference number: 5 (lower is better)
Translates to: PLLSLLLVFLLDCLLPHDLNKSA*SLQILE
Trigger: TTCTAGTATCTGCAAAGACAATGCAGACTTGTTGAG...ATCATGAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp TCTATAACCTCTTCTTTCTCTTCTTCTGGTTTTTCTTCTGGATTGTCTACTTCCCAAGGTATCCTACTTTaGCCAAATCCAGGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SITSSFSSSGFSSGLSTSQGILL*PNPGLF
Trigger: GAAAAGACCTGGATTTGGCAAAAGTAGGATACCTTG...GGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp GTGTCTAAAATAGTAGGTTTGCCCACAAATTCCTTGCTAGAATGTAGGTGTTGTATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: VSKIVGLPTNSLLECRCCIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...ACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGTCAGAGGGAGAATTCTaGATTTTCTTCGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWSEGEF*IFFVFG
Trigger: ACCAAAGACGAAGAAAATCAAGAATTCTCCCTCTGA...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000665872.1
CDS-3UTR CAA 90 bp GTGCAGGTTCCAAGCTTTACTATCCTTGCCTATTTCTTGGTGATCTTAAGACAATCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: VQVPSFTILAYFLVILRQSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...TTGTCTTAAGATCACCAAGAAATAGGCAAGGATAGTAAAGCTTGGAACCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp TTTGCTTGTCAACAATGTACCCTTGACAGCAGGGAGAAACTTCTTTATAGTCTCTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: FACQQCTLDSREKLLYSLSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...GAGACTATAAAGAAGTTTCTCCCTGCTGTCAAGGGTACATTGTTGACAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp CACTCTTGCTTCTCTGCTTTGTCATTCAACCATTCTGTAACTAGATACTTTTTGTTGAAGAAATGCCCATaGACCTCAAATTGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: HSCFSALSFNHSVTRYFLLKKCP*TSNCCR
Trigger: ACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAA...CAAAAAGTATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAAAGTCTGCATTGTCTTaGCAGATACTAGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSKSALS*QILEEL
Trigger: TAGCTCTTCTAGTATCTGCAAAGACAATGCAGACTT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp ATGCAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCAATTTTCCTTAGCTTCTaGTTTCCGTTTTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: MQLAYIMSHSSFSCLLTSIFLSF*FPFSVL
Trigger: GAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAAT...TGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS-3UTR CAA 90 bp CAATTGGCCTATATCATGTCTCATTCCTCCTTTTCTTGTCTACTTACTTCATGGATCCTTGCCTATTTCTaGGTGATCTTAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: QLAYIMSHSSFSCLLTSWILAYF*VILRQR
Trigger: TCTTTGTCTTAAGATCACCAAGAAATAGGCAAGGAT...CCATGAAGTAAGTAGACAAGAAAAGGAGGAATGAGACATGATATAGGCCAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402198.7
ENST00000406341.5
ENST00000407969.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
CDS TCA 90 bp ATAAGCCATACCCCAATGTTTTCTAAATCTCTGCTAAGGCCACAATaGAAATACCAAACAACCTGGGAAAGACACTTCACTTATTTAAAG +
Preference number: 5 (lower is better)
Translates to: ISHTPMFSKSLLRPQ*KYQTTWERHFTYLK
Trigger: CTTTAAATAAGTGAAGTGTCTTTCCCAGGTTGTTTGGTATTTTCATTGTGGCCTTAGCAGAGATTTAGAAAACATTGGGGTATGGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000684055.1
ENST00000684606.1
CDS-3UTR CAA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATTCTTGCTTCTCTGCTTaGTCATTCAACCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: LHLGTNNCVITGQFSLINSCFSA*SFNHSV
Trigger: TACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGA...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS GCA 90 bp CTCTTCCTCAATTTCAGTGTCTTGTATGAGAATGAATGTGGCAGCTaGATTATATACTTATCTTCATCTCCATCTCAAAGTCAAATATCT +
Preference number: 5 (lower is better)
Translates to: LFLNFSVLYENECGS*IIYLSSSPSQSQIS
Trigger: AGATATTTGACTTTGAGATGGAGATGAAGATAAGTATATAATGCAGCTGCCACATTCATTCTCATACAAGACACTGAAATTGAGGAAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670063.1
CDS GCA 90 bp ATTTTGACCAAAGTATACAGTAAAGATAACGATGGAGATCTAGCATaGTTACTACCTAAACTTATGGAGATTGATGGACTGCATGCAAAA +
Preference number: 5 (lower is better)
Translates to: ILTKVYSKDNDGDLA*LLPKLMEIDGLHAK
Trigger: TTTTGCATGCAGTCCATCAATCTCCATAAGTTTAGGTAGTAAGCATGCTAGATCTCCATCGTTATCTTTACTGTATACTTTGGTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000684055.1
ENST00000684606.1
CDS-3UTR CAA 90 bp CTGCATTTGGGAACCAATAACTGTGTTATTACAGGCCAATTCAGTCTTATTAATTCTAAAATAGTAGGTTaGCCCACAAATTCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: LHLGTNNCVITGQFSLINSKIVG*PTNSLL
Trigger: TAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGA...ATTAATAAGACTGAATTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
CDS TCA 72 bp CTACTGTGTTGGCGGACTGGCGGGACTGGGGCTGCGTaGGTCTCTGAGCGCAGGCGGGCGGCGGCCGCCCCT +
Preference number: 6 (lower is better)
Translates to: LLCWRTGGTGAA*VSERRRAAAAP
Trigger: AGGGGCGGCCGCCGCCCGCCTGCGCTCAGAGACTCACGCAGCCCCAGTCCCGCCAGTCCGCCAACACAGTAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402198.7
ENST00000431285.5
CDS CCA 72 bp CTCGAGTTAGGCCCAACGCGGCGCCACGGCGTTTCCTaGCCGGGAATGGCCCGTACCCGTGAGGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LELGPTRRHGVS*PGMARTREVGV
Trigger: CACCCCCACCTCACGGGTACGGGCCATTCCCGGCCAGGAAACGCCGTGGCGCCGCGTTGGGCCTAACTCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402198.7
ENST00000431285.5
ENST00000683012.1
CDS TCA 72 bp TGCCAAATCCAGGTCTTTTCGGTGACAAAGCTCGGGTaGCAGGGACTCGGGCCTATGCGCAGGGGAACTCTC +
Preference number: 6 (lower is better)
Translates to: CQIQVFSVTKLG*QGLGPMRRGTL
Trigger: GAGAGTTCCCCTGCGCATAGGCCCGAGTCCCTGTCACCCGAGCTTTGTCACCGAAAAGACCTGGATTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421188.1
CDS CCA 72 bp GTGTGCTGCCCCCTAGGCCCCTTGGGTCTCTTTCGCTaGACTTTCACATCCTGGTGTAGTGCCACTTCGTCT +
Preference number: 6 (lower is better)
Translates to: VCCPLGPLGLFR*TFTSWCSATSS
Trigger: AGACGAAGTGGCACTACACCAGGATGTGAAAGTCCAGCGAAAGAGACCCAAGGGGCCTAGGGGGCAGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000431285.5
ENST00000443339.5
ENST00000468208.2
ENST00000663774.1
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683012.1
ENST00000683262.1
ENST00000684606.1
CDS TCA 72 bp AGCAGAAGGCCATGGGCTCACCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGGGAGAGGGCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: SRRPWAHLSLSL*CYSPMWERALP
Trigger: AGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGGTGAGCCCATGGCCTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459941.1
ENST00000486465.5
ENST00000682236.1
CDS TCA 72 bp GGAAGGCAGCCTGAATCCAGATCTTCTTACAGGAGCTaGATGTGCCATCAGGCAGAAGGGGCCTTCGACGTC +
Preference number: 6 (lower is better)
Translates to: GRQPESRSSYRS*MCHQAEGAFDV
Trigger: GACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCAGCTCCTGTAAGAAGATCTGGATTCAGGCTGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476740.2
CDS TCA 72 bp GAGGTCGGGAGATTGAGACCGTCGTGGCCAACATGGTaGAACTCCGTCTCCTCCTGCTATGAGCTAGGTTCT +
Preference number: 6 (lower is better)
Translates to: EVGRLRPSWPTW*NSVSSCYELGS
Trigger: AGAACCTAGCTCATAGCAGGAGGAGACGGAGTTTCACCATGTTGGCCACGACGGTCTCAATCTCCCGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684606.1
CDS CCA 72 bp CAAATGAGCATAAGTGGGCTGGAACCTAGCATGCGGTaGAGCCCAACTGCATCAGAAACTGACTCACCTCAA +
Preference number: 6 (lower is better)
Translates to: QMSISGLEPSMR*SPTASETDSPQ
Trigger: TTGAGGTGAGTCAGTTTCTGATGCAGTTGGGCTCCACCGCATGCTAGGTTCCAGCCCACTTATGCTCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459941.1
ENST00000486465.5
ENST00000682236.1
CDS CAA 72 bp GCCATCACCAACCCGTACTGCTCTCTTTGTGACAAATaGGGTGAGTGCAGCATGCCAGAAGGGCAAAATGAG +
Preference number: 6 (lower is better)
Translates to: AITNPYCSLCDK*GECSMPEGQNE
Trigger: CTCATTTTGCCCTTCTGGCATGCTGCACTCACCCAATTTGTCACAAAGAGAGCAGTACGGGTTGGTGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459941.1
ENST00000682236.1
CDS TCA 72 bp GTGGCCAACATGGTGAAACTCCGTCTCCTCCTGCTATaGGCTAGGTTCTCCTGGTCATCTATAACCTCTTCT +
Preference number: 6 (lower is better)
Translates to: VANMVKLRLLLL*ARFSWSSITSS
Trigger: AGAAGAGGTTATAGATGACCAGGAGAACCTAGCTCATAGCAGGAGGAGACGGAGTTTCACCATGTTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684606.1
CDS CCA 72 bp CCATCACCAACCCGTACTGCTCTCTTTGTGACAAATTaGGTGAGTGCAGCATGCCAGAAGGGCAAAATGAGT +
Preference number: 6 (lower is better)
Translates to: PSPTRTALFVTN*VSAACQKGKMS
Trigger: ACTCATTTTGCCCTTCTGGCATGCTGCACTCACCCAATTTGTCACAAAGAGAGCAGTACGGGTTGGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459941.1
ENST00000682236.1
CDS TCA 72 bp ACATCAAATAATCTACATGCAGCATCCTCATGTACGTaGTGCCAGTGGAGGAGGGCAATGGCAGACACTGAG +
Preference number: 6 (lower is better)
Translates to: TSNNLHAASSCT*CQWRRAMADTE
Trigger: CTCAGTGTCTGCCATTGCCCTCCTCCACTGGCATCACGTACATGAGGATGCTGCATGTAGATTATTTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476740.2
CDS TCA 72 bp GAGAGTTACAGAAAGGTATTCCTGAGTCTTTCTCTGTaGTGTTACTCTCCCATGTGGGAGAGGGCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: ESYRKVFLSLSL*CYSPMWERALP
Trigger: AGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGGAATACCTTTCTGTAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479538.1
CDS TCA 72 bp TGGACTTTCACATCCTGGTGTAGTGCCACTTCGTCTTaGAAGGTAGGGGGCTTCCACTTCCTTTCTTCATTG +
Preference number: 6 (lower is better)
Translates to: WTFTSWCSATSS*KVGGFHFLSSL
Trigger: CAATGAAGAAAGGAAGTGGAAGCCCCCTACCTTTCAAGACGAAGTGGCACTACACCAGGATGTGAAAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683012.1
CDS CAA 90 bp ATCACCAGTGCCATCACCAACCCGTACTGCTCTCTTTGTGACAAATaGGGTGAGTGCAGCATGCCAGAAGGGCAAAATGAGTGGTTAATT +
Preference number: 6 (lower is better)
Translates to: ITSAITNPYCSLCDK*GECSMPEGQNEWLI
Trigger: AATTAACCACTCATTTTGCCCTTCTGGCATGCTGCACTCACCCAATTTGTCACAAAGAGAGCAGTACGGGTTGGTGATGGCACTGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459941.1
ENST00000682236.1
CDS TCA 72 bp CCTATGCAGACAGCAACTCAGCCAAGGAGCAATCTCTaGTCAACTCTCTCCATAAACCAACAGAACGCCAAA +
Preference number: 6 (lower is better)
Translates to: PMQTATQPRSNL*STLSINQQNAK
Trigger: TTTGGCGTTCTGTTGGTTTATGGAGAGAGTTGATCAGAGATTGCTCCTTGGCTGAGTTGCTGTCTGCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683262.1
ENST00000684606.1
CDS CAA 72 bp TCAGGGGAGGATATGTTCTCAAACTGTAGAGGAGTGTaGCAGCGACTAGCAGTAGTAAGAGATGTGACTGGT +
Preference number: 6 (lower is better)
Translates to: SGEDMFSNCRGV*QRLAVVRDVTG
Trigger: ACCAGTCACATCTCTTACTACTGCTAGTCGCTGCAACACTCCTCTACAGTTTGAGAACATATCCTCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421188.1
CDS CAA 72 bp TACATGAATGGGATTTGTGGTAGCAGTATGCCTATTTaGGGAAGCATAGGGGCTGCCAAGATGAGAGGCTAC +
Preference number: 6 (lower is better)
Translates to: YMNGICGSSMPI*GSIGAAKMRGY
Trigger: GTAGCCTCTCATCTTGGCAGCCCCTATGCTTCCCAAAATAGGCATACTGCTACCACAAATCCCATTCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000488236.5
ENST00000684055.1
ENST00000684606.1
CDS CAA 90 bp TGCAAAAGATACATGAATGGGATTTGTGGTAGCAGTATGCCTATTTaGGGAAGCATAGGGGCTGCCAAGATGAGAGGCTACCAGGTAACA +
Preference number: 6 (lower is better)
Translates to: CKRYMNGICGSSMPI*GSIGAAKMRGYQVT
Trigger: TGTTACCTGGTAGCCTCTCATCTTGGCAGCCCCTATGCTTCCCAAAATAGGCATACTGCTACCACAAATCCCATTCATGTATCTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000488236.5
ENST00000684055.1
ENST00000684606.1
CDS GCA 72 bp AGATCTGCTGCCAGAGAAACAATTGTTAACAGCCTATaGAGACAGCAACTCAGCCAAGGAGCAATCTCTGAT +
Preference number: 6 (lower is better)
Translates to: RSAARETIVNSL*RQQLSQGAISD
Trigger: ATCAGAGATTGCTCCTTGGCTGAGTTGCTGTCTGCATAGGCTGTTAACAATTGTTTCTCTGGCAGCAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683262.1
ENST00000684606.1
CDS TCA 72 bp AGTCTCACTCAAGAAGTGGCTGTGGGATCAAGAGTCTaGACTGGACCTGAACATATTCAAAACACCAGGATT +
Preference number: 6 (lower is better)
Translates to: SLTQEVAVGSRV*TGPEHIQNTRI
Trigger: AATCCTGGTGTTTTGAATATGTTCAGGTCCAGTTCAGACTCTTGATCCCACAGCCACTTCTTGAGTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS GCA 72 bp TGCATGAAATCAAAGATGGCCATGGAGATGGAGCTATaGTGGTTGTATCTTACCCATCTCCAAACGGGTAAA +
Preference number: 6 (lower is better)
Translates to: CMKSKMAMEMEL*WLYLTHLQTGK
Trigger: TTTACCCGTTTGGAGATGGGTAAGATACAACCAGCATAGCTCCATCTCCATGGCCATCTTTGATTTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS CAA 72 bp AATCCTGATGAACAAGATCTGCTGCCAGAGAAACAATaGTTAACAGCCTATGCAGACAGCAACTCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: NPDEQDLLPEKQ*LTAYADSNSAK
Trigger: CTTGGCTGAGTTGCTGTCTGCATAGGCTGTTAACAATTGTTTCTCTGGCAGCAGATCTTGTTCATCAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683262.1
ENST00000684606.1
CDS CAA 90 bp AACAGTCTCTGTATCATCATTCTGACAGTCTCTTCTCTATATGACTaGCTGAAAGCACAAGACCTGTATGATCTCCCTGGTCACTCACAG +
Preference number: 6 (lower is better)
Translates to: NSLCIIILTVSSLYD*LKAQDLYDLPGHSQ
Trigger: CTGTGAGTGACCAGGGAGATCATACAGGTCTTGTGCTTTCAGCAAGTCATATAGAGAAGAGACTGTCAGAATGATGATACAGAGACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468208.2
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683262.1
ENST00000684606.1
CDS GCA 72 bp AACAACCAATCCAACGAAAGAAATTCAGAACAAGTCTaGTTCAGTAATCCTGTGAAGAGGACTGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: NNQSNERNSEQV*FSNPVKRTGRK
Trigger: CTTCCTGCCAGTCCTCTTCACAGGATTACTGAAGCAGACTTGTTCTGAATTTCTTTCGTTGGATTGGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683262.1
ENST00000684606.1
CDS CAA 90 bp AGTTGCATGAAATCAAAGATGGCCATGGAGATGGAGCTATGCTGGTaGTATCTTACCCATCTCCAAACGGGTAAATATGAACATATGCAC +
Preference number: 6 (lower is better)
Translates to: SCMKSKMAMEMELCW*YLTHLQTGKYEHMH
Trigger: GTGCATATGTTCATATTTACCCGTTTGGAGATGGGTAAGATACAACCAGCATAGCTCCATCTCCATGGCCATCTTTGATTTCATGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS TCA 72 bp AGTATAATTTTAGGGATTGGGCCTTTGGACAAACTCTaGATTCCTAAAGCTGCTCTTAGTCTGATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: SIILGIGPLDKL*IPKAALSLIQQ
Trigger: CTGCTGGATCAGACTAAGAGCAGCTTTAGGAATTCAGAGTTTGTCCAAAGGCCCAATCCCTAAAATTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683012.1
CDS GCA 72 bp ATCTTACCCATCTCCAAACGGGTAAATATGAACATATaGACTTCATGTGCAAGTCTCACTCAAGAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: ILPISKRVNMNI*TSCASLTQEVA
Trigger: AGCCACTTCTTGAGTGAGACTTGCACATGAAGTGCATATGTTCATATTTACCCGTTTGGAGATGGGTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS CCA 72 bp ATGAAATCAAAGATGGCCATGGAGATGGAGCTATGCTaGTTGTATCTTACCCATCTCCAAACGGGTAAATAT +
Preference number: 6 (lower is better)
Translates to: MKSKMAMEMELC*LYLTHLQTGKY
Trigger: ATATTTACCCGTTTGGAGATGGGTAAGATACAACCAGCATAGCTCCATCTCCATGGCCATCTTTGATTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS CAA 72 bp TGTATCATCATTCTGACAGTCTCTTCTCTATATGACTaGCTGAAAGCACAAGACCTGTATGATCTCCCTGGT +
Preference number: 6 (lower is better)
Translates to: CIIILTVSSLYD*LKAQDLYDLPG
Trigger: ACCAGGGAGATCATACAGGTCTTGTGCTTTCAGCAAGTCATATAGAGAAGAGACTGTCAGAATGATGATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468208.2
ENST00000665872.1
ENST00000666307.1
ENST00000670063.1
ENST00000683262.1
ENST00000684606.1
CDS CAA 72 bp AAATCAAAGATGGCCATGGAGATGGAGCTATGCTGGTaGTATCTTACCCATCTCCAAACGGGTAAATATGAA +
Preference number: 6 (lower is better)
Translates to: KSKMAMEMELCW*YLTHLQTGKYE
Trigger: TTCATATTTACCCGTTTGGAGATGGGTAAGATACAACCAGCATAGCTCCATCTCCATGGCCATCTTTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS TCA 72 bp CTTATGGAGATTGATGGACTGCATGCAAAAGATACATaGATGGGATTTGTGGTAGCAGTATGCCTATTTTGG +
Preference number: 6 (lower is better)
Translates to: LMEIDGLHAKDT*MGFVVAVCLFW
Trigger: CCAAAATAGGCATACTGCTACCACAAATCCCATTCATGTATCTTTTGCATGCAGTCCATCAATCTCCATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000488236.5
ENST00000684055.1
ENST00000684606.1
CDS TCA 72 bp ACCCCAATGTTTTCTAAATCTCTGCTAAGGCCACAATaGAAATACCAAACAACCTGGGAAAGACACTTCACT +
Preference number: 6 (lower is better)
Translates to: TPMFSKSLLRPQ*KYQTTWERHFT
Trigger: AGTGAAGTGTCTTTCCCAGGTTGTTTGGTATTTTCATTGTGGCCTTAGCAGAGATTTAGAAAACATTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000684055.1
ENST00000684606.1
CDS CCA 72 bp ACAATGACCCTGAGGTTTCCCATTCTCTTACTGAGATaGGGAAGAAAGATAGTAAAGAAACATTTGGAATGG +
Preference number: 6 (lower is better)
Translates to: TMTLRFPILLLR*GRKIVKKHLEW
Trigger: CCATTCCAAATGTTTCTTTACTATCTTTCTTCCCCATCTCAGTAAGAGAATGGGAAACCTCAGGGTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000488236.5
ENST00000684055.1
ENST00000684606.1
CDS TCA 72 bp TCTCTGAGTATTAGGAAACAGGTGGGGTTTCCTAAATaGAACCAAAGGCAGACAAGCATTAATAAAATGAAG +
Preference number: 6 (lower is better)
Translates to: SLSIRKQVGFPK*NQRQTSINKMK
Trigger: CTTCATTTTATTAATGCTTGTCTGCCTTTGGTTTCATTTAGGAAACCCCACCTGTTTCCTAATACTCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683262.1
CDS CAA 72 bp GAATTCCTACTTTGCAACTTTGGTTCTATTAATTATTaGCCCAGAAATACCCCTCTGAAAACTCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: EFLLCNFGSINY*PRNTPLKTLPS
Trigger: GGAAGGAAGAGTTTTCAGAGGGGTATTTCTGGGCAAATAATTAATAGAACCAAAGTTGCAAAGTAGGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463180.5
CDS TCA 72 bp GAAAGAGATAGTACTGGTGTAGAAGGAAGCTTCAAATaGGGACGAGTGGATAGCTTTTATAAAAGTATTTTT +
Preference number: 6 (lower is better)
Translates to: ERDSTGVEGSFK*GRVDSFYKSIF
Trigger: AAAAATACTTTTATAAAAGCTATCCACTCGTCCTCATTTGAAGCTTCCTTCTACACCAGTACTATCTCTTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684606.1