RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000185917

Ensembl transcript IDs: ENST00000332131.9, ENST00000399201.5, ENST00000399205.5, ENST00000399207.5, ENST00000399208.6, ENST00000399212.5, ENST00000399215.5, ENST00000424303.5, ENST00000429161.5, ENST00000442559.5, ENST00000443703.1, ENST00000446166.5, ENST00000460704.1, ENST00000469482.1, ENST00000481477.5, ENST00000485865.1, ENST00000487297.5

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTGCTaGCCCCTGCAGAAATCCTGCATGTCCTGGGGGCAGCCACCACCC +
Preference number: 1 (lower is better)
Translates to: ACPPSLTASQSQNLC*PLQKSCMSWGQPPP
Trigger: GGGTGGTGGCTGCCCCCAGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR GCA 90 bp ACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTaGTGCCCCCTGCAGAAATCCTGCATGTCCTGGGGGCAGCCACCA +
Preference number: 1 (lower is better)
Translates to: TACPPSLTASQSQNL*CPLQKSCMSWGQPP
Trigger: TGGTGGCTGCCCCCAGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR CCA 90 bp AGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATaGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGAA +
Preference number: 1 (lower is better)
Translates to: SFPGAQPCKWLTCCR*PLCRIAGTKTTGPE
Trigger: TTCTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR GCA 90 bp GGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTaGAGAATCGCTGGGACTAAGACCACAGGTCCAGAAAGCTTCAAA +
Preference number: 1 (lower is better)
Translates to: GAQPCKWLTCCRWPL*RIAGTKTTGPESFK
Trigger: TTTGAAGCTTTCTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR TCA 90 bp AGAATAAGAACAGAAGCCAAACCACCACCATGGTTCGCCATCAGCTaGCCTACACTGAACCCCAGAATCAAGCAGACAGGCCCACCACGG +
Preference number: 1 (lower is better)
Translates to: RIRTEAKPPPWFAIS*PTLNPRIKQTGPPR
Trigger: CCGTGGTGGGCCTGTCTGCTTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTGGCTTCTGTTCTTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAAAATCCTGCATGTCCTaGGGGCAGCCACCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAKSCMS*GQPPPQ
Trigger: CTGGGGTGGTGGCTGCCCCCAGGACATGCAGGATTT...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAAGCAGGCCCCGTGGTaGCAGACCACACACGGACGC +
Preference number: 2 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLKQAPW*QTTHGR
Trigger: GCGTCCGTGTGTGGTCTGTCACCACGGGGCCTGCTT...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACCTGTGCTGCCCCCTaGAGAAATCCTGCATGTCCT +
Preference number: 2 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVTCAAP*RNPACP
Trigger: AGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGT...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp CTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCAACACACGGACGCAGCTaGCTCCTGGCTGCCTCACAG +
Preference number: 2 (lower is better)
Translates to: LEAVCPLGGSSTPTSVQPTHGRS*LLAASQ
Trigger: CTGTGAGGCAGCCAGGAGCCAGCTGCGTCCGTGTGT...TGGCTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGCGTCTGGGCCACCCTaGCGGGGATCCAGGACTACC +
Preference number: 2 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTASGPP*RGSRTT
Trigger: GGTAGTCCTGGATCCCCGCCAGGGTGGCCCAGACGC...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGTCCCCAGCACGGGCCTaGACAGGACCAGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNESPARA*TGPAAP
Trigger: AGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGA...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACAGGACTACCTCACACTaGCCCACACCCACCGCCAAT +
Preference number: 2 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDRTTSH*PTPTAN
Trigger: ATTGGCGGTGGGTGTGGGGCAGTGTGAGGTAGTCCT...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGCAACACCCACCTCAGTaGAGCCACACAGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: HAADGRSAESLGLRPQVQQHPPQ*SHTGKG
Trigger: GCCCTTCCCTGTGTGGCTGCACTGAGGTGGGTGTTG...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGGCGTCTGGGCCACCCTaGCGGGGATCCAGGACTACC +
Preference number: 2 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEASGPP*RGSRTT
Trigger: GGTAGTCCTGGATCCCCGCCAGGGTGGCCCAGACGC...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCAGACAAGCGCCACCTTaGGAGGCCAGGAGCATGCTT +
Preference number: 2 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCRQAPP*EARSML
Trigger: AAGCATGCTCCTGGCCTCTCAAGGTGGCGCTTGTCT...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGAGGACTACCTCACACTaGCCCACACCCACCGCCAAT +
Preference number: 2 (lower is better)
Translates to: HAADGRSAESLGLRPQVQRTTSH*PTPTAN
Trigger: ATTGGCGGTGGGTGTGGGGCAGTGTGAGGTAGTCCT...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCACCCACCGCCAATCTaGCCCTTAACCCAATGGTAT +
Preference number: 2 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDHPPPI*PLTQWY
Trigger: ATACCATTGGGTTAAGGGGCAGATTGGCGGTGGGTG...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTCCCCTGCAGAAATCCTaGATGTCCTGGGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPPLQKS*MSWGQP
Trigger: TGGCTGCCCCCAGGACATGCAGGATTTCTGCAGGGG...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGACCTGTGCTGCCCCCTaGAGAAATCCTGCATGTCCT +
Preference number: 2 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLTCAAP*RNPACP
Trigger: AGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGT...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGCACCCACCGCCAATCTaGCCCTTAACCCAATGGTAT +
Preference number: 2 (lower is better)
Translates to: HAADGRSAESLGLRPQVQHPPPI*PLTQWY
Trigger: ATACCATTGGGTTAAGGGGCAGATTGGCGGTGGGTG...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCCAGGTGGAAAGGCCTaGCCAGGAAAGTCGCCAGAA +
Preference number: 2 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPPGGKA*PGKSPE
Trigger: TTCTGGCGACTTTCCTGGGCAGGCCTTTCCACCTGG...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACACCAGGTGGAAAGGCCTaGCCAGGAAAGTCGCCAGAA +
Preference number: 2 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTPGGKA*PGKSPE
Trigger: TTCTGGCGACTTTCCTGGGCAGGCCTTTCCACCTGG...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAAACCACGGCCCAGCTGTaGAGGATGAGCCAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQTTAQL*RMSQLP
Trigger: GGGGAGCTGGCTCATCCTGCACAGCTGGGCCGTGGT...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp CCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAGCTAGTCATTACACACGGACGCAGCTaGCTCCTGGCTGCCTCACAG +
Preference number: 2 (lower is better)
Translates to: PRKVARTKQKEPLAELVITHGRS*LLAASQ
Trigger: CTGTGAGGCAGCCAGGAGCCAGCTGCGTCCGTGTGT...AATGACTAGCTCAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCAAGCAGGCCCCGTGGTaGCAGACCACACACGGACGC +
Preference number: 2 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTKQAPW*QTTHGR
Trigger: GCGTCCGTGTGTGGTCTGTCACCACGGGGCCTGCTT...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGAAAGAGCCGCTGGCTaGGCTAGTCATTCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTERAAG*ASHSSQ
Trigger: TTGGGAAGAATGACTAGCTCAGCCAGCGGCTCTTTC...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGTGGTTCGCCATCAGCTaGCCTACACTGAACCCCAGA +
Preference number: 2 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEWFAIS*PTLNPR
Trigger: TCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCA...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAACCACGGCCCAGCTGTaGAGGATGAGCCAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTATTAQL*RMSQLP
Trigger: GGGGAGCTGGCTCATCCTGCACAGCTGGGCCGTGGT...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp AGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAAAAATCCTGCATGTCCTaGGGGCAGCCACCACCCCAG +
Preference number: 2 (lower is better)
Translates to: SIRPAIQTACPPSLTASQKSCMS*GQPPPQ
Trigger: CTGGGGTGGTGGCTGCCCCCAGGACATGCAGGATTT...TTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGGAAAGAGCCGCTGGCTaGGCTAGTCATTCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEERAAG*ASHSSQ
Trigger: TTGGGAAGAATGACTAGCTCAGCCAGCGGCTCTTTC...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTCACCCACCGCCAATCTaGCCCTTAACCCAATGGTAT +
Preference number: 2 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPHPPPI*PLTQWY
Trigger: ATACCATTGGGTTAAGGGGCAGATTGGCGGTGGGTG...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp GCCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAAATCCTGCATGTCCTaGGGGCAGCCACCACCCCAG +
Preference number: 2 (lower is better)
Translates to: ALHRSLPTLHTAYDEIHCKSCMS*GQPPPQ
Trigger: CTGGGGTGGTGGCTGCCCCCAGGACATGCAGGATTT...GCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTAGGAAGGGCTGGCGTCTaGGCCACCCTGGCGGGGATC +
Preference number: 2 (lower is better)
Translates to: STEVCPLSIQHMMKYTALGRAGV*ATLAGI
Trigger: GATCCCCGCCAGGGTGGCCCAGACGCCAGCCCTTCC...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCACCCAAGGTCTGCGTaGTATCAAAACTCAAGAATA +
Preference number: 2 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDHPRSA*YQNSRI
Trigger: TATTCTTGAGTTTTGATACCACGCAGACCTTGGGTG...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAATGGTTCGCCATCAGCTaGCCTACACTGAACCCCAGA +
Preference number: 2 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQWFAIS*PTLNPR
Trigger: TCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCA...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATCCCCAGCACGGGCCTaGACAGGACCAGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: STEVCPLSIQHMMKYTALSPARA*TGPAAP
Trigger: AGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGA...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACCCCTGCAGAAATCCTaGATGTCCTGGGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSPLQKS*MSWGQP
Trigger: TGGCTGCCCCCAGGACATGCAGGATTTCTGCAGGGG...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCCACCCAAGGTCTGCGTaGTATCAAAACTCAAGAATA +
Preference number: 2 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCHPRSA*YQNSRI
Trigger: TATTCTTGAGTTTTGATACCACGCAGACCTTGGGTG...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGGTCATTCTTCCCAAGTaGATAATTAGACAAGCGCCA +
Preference number: 2 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLVILPK*IIRQAP
Trigger: TGGCGCTTGTCTAATTATTCACTTGGGAAGAATGAC...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGTGCCCCTTAACCCAATaGTATCAGAGCATCTTAAAA +
Preference number: 2 (lower is better)
Translates to: HAADGRSAESLGLRPQVQCPLTQ*YQSILK
Trigger: TTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCA...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGAAGGGCTGGCGTCTaGGCCACCCTGGCGGGGATC +
Preference number: 2 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIGRAGV*ATLAGI
Trigger: GATCCCCGCCAGGGTGGCCCAGACGCCAGCCCTTCC...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACCCCAGCTGTGCAGGATaGGCCAGCTCCCCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYPSCAG*ASSPGG
Trigger: TCCACCTGGGGAGCTGGCTCATCCTGCACAGCTGGG...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACATTCACTAGGCTCCAATaGGAAAGGAATTTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTFTRLQ*ERNLSS
Trigger: AGAACTCAAATTCCTTTCTCATTGGAGCCTAGTGAA...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp GCCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTTTAAACTCTGCCTaGCTCCTGAGGCCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: ALHRSLPTLHTAYDEIHCILNSA*LLRPAG
Trigger: ACCTGCTGGCCTCAGGAGGCAGGCAGAGTTTAAAAT...GCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAATTTTAAACTCTGCCTaGCTCCTGAGGCCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAILNSA*LLRPAG
Trigger: ACCTGCTGGCCTCAGGAGGCAGGCAGAGTTTAAAAT...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGAAGCAGGCCCCGTGGTaGCAGACCACACACGGACGC +
Preference number: 2 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKKQAPW*QTTHGR
Trigger: GCGTCCGTGTGTGGTCTGTCACCACGGGGCCTGCTT...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAAGTCATTCTTCCCAAGTaGATAATTAGACAAGCGCCA +
Preference number: 2 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQVILPK*IIRQAP
Trigger: TGGCGCTTGTCTAATTATTCACTTGGGAAGAATGAC...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGCAGCTGGCTCCTGGCTaGCTCACAGTCCGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKQLAPG*LTVRLS
Trigger: AGAGAGGCGGACTGTGAGGCAGCCAGGAGCCAGCTG...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR TCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGACAAGCGCCACCTTaGGAGGCCAGGAGCATGCTT +
Preference number: 2 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKRQAPP*EARSML
Trigger: AAGCATGCTCCTGGCCTCTCAAGGTGGCGCTTGTCT...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGCAACACCCACCTCAGTaGAGCCACACAGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKQHPPQ*SHTGKG
Trigger: GCCCTTCCCTGTGTGGCTGCACTGAGGTGGGTGTTG...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGGGGGTCAGGAAACTATaGCCCACCACCTGTCGTTGT +
Preference number: 2 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKGVRKL*PTTCRC
Trigger: ACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCC...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR GCA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGTGCAAATGGTTGACATaGTGCCGATGGCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKCKWLT*CRWPLC
Trigger: GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCA...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATGCCCCTTAACCCAATaGTATCAGAGCATCTTAAAA +
Preference number: 2 (lower is better)
Translates to: STEVCPLSIQHMMKYTALCPLTQ*YQSILK
Trigger: TTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCA...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGTGCCATCCAGACAGCTaGTCCACCTTCACTCACAGC +
Preference number: 3 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLCHPDS*STFTHS
Trigger: GCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCA...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR GCA 72 bp CCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTaGTGCCCCCTGCAGAAATCCTGCATGTCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: PPSLTASQSQNL*CPLQKSCMSWG
Trigger: CCCCCAGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR GCA 72 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTaGCGATGGCCGCTCTGCAGAATCGCTGGGACTAAG +
Preference number: 3 (lower is better)
Translates to: FPGAQPCKWLTC*RWPLCRIAGTK
Trigger: CTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR GCA 72 bp AGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATaGTGCCGATGGCCGCTCTGCAGAATCGCTGGGACT +
Preference number: 3 (lower is better)
Translates to: SFPGAQPCKWLT*CRWPLCRIAGT
Trigger: AGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR CCA 72 bp GGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATaGCCGCTCTGCAGAATCGCTGGGACTAAGACCACA +
Preference number: 3 (lower is better)
Translates to: GAQPCKWLTCCR*PLCRIAGTKTT
Trigger: TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACATGCCATCCAGACAGCTaGTCCACCTTCACTCACAGC +
Preference number: 3 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTCHPDS*STFTHS
Trigger: GCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCA...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR GCA 72 bp CCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTaGAGAATCGCTGGGACTAAGACCACAGGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: PCKWLTCCRWPL*RIAGTKTTGPE
Trigger: TTCTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp CCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAGCTAGTCATTTGCCATCCAGACAGCTaGTCCACCTTCACTCACAGC +
Preference number: 3 (lower is better)
Translates to: PRKVARTKQKEPLAELVICHPDS*STFTHS
Trigger: GCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCA...AATGACTAGCTCAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGGCAGGTCCCGTTCATTaGGTTTCACTAGGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPAGPVH*VSLGSN
Trigger: ATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGC...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACGGACTCTGGGCAACATaGTCTAAGCGGCGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYGLWAT*SKRRPQ
Trigger: CTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGGGACTCTGGGCAACATaGTCTAAGCGGCGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKGLWAT*SKRRPQ
Trigger: CTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGGCCCACCACCTGTCGTaGTCAGTAGTTTCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKAHHLS*SVVSLE
Trigger: CTCCAGGGAAACTACTGACAACGACAGGTGGTGGGC...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
3UTR-3UTR CAA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAAGGAATTTGAGTTCTaGGGAAGAATGAACCCTGGG +
Preference number: 3 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKKEFEF*GRMNPG
Trigger: CCCAGGGTTCATTCTTCCCAAGAACTCAAATTCCTT...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGGGAAGGGCTGGCGTCTaGGCCACCCTGGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLGRAGV*ATLAGI
Trigger: GATCCCCGCCAGGGTGGCCCAGACGCCAGCCCTTCC...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCACCCAGCTGTGCAGGATaGGCCAGCTCCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAPSCAG*ASSPGG
Trigger: TCCACCTGGGGAGCTGGCTCATCCTGCACAGCTGGG...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAAGATGGAGGCTGCAGTaGGCGGGCCCAAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYARWRLQ*AGPRHV
Trigger: CACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCT...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR GCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCGGCGGCTGGTTCGGTaGGGGTCCCAGCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQRRLVR*GSQRSV
Trigger: GACTGAGCGCTGGGACCCGCACCGAACCAGCCGCCG...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR CCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGGGAAGGGCTGGCGTCTaGGCCACCCTGGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQGRAGV*ATLAGI
Trigger: GATCCCCGCCAGGGTGGCCCAGACGCCAGCCCTTCC...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCGGCCGCTTCCAAGATaGAGGCTGCAGTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQRPLPR*RLQWAG
Trigger: GCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCG...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR CCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGGCGTCTGGGCCACCCTaGCGGGGATCCAGGACTACC +
Preference number: 4 (lower is better)
Translates to: HAADGRSAESLGLRPQVQASGPP*RGSRTT
Trigger: GGTAGTCCTGGATCCCCGCCAGGGTGGCCCAGACGC...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTAGACAAGCGCCACCTTaGGAGGCCAGGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVRQAPP*EARSML
Trigger: AAGCATGCTCCTGGCCTCTCAAGGTGGCGCTTGTCT...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCCAGCTGTGCAGGATaGGCCAGCTCCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQPSCAG*ASSPGG
Trigger: TCCACCTGGGGAGCTGGCTCATCCTGCACAGCTGGG...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGGGCATTCCCGCTGCCTaGGCCTCAGGTACACGGCTC +
Preference number: 4 (lower is better)
Translates to: HAADGRSAESLGLRPQVQGIPAA*ASGTRL
Trigger: GAGCCGTGTACCTGAGGCCCAGGCAGCGGGAATGCC...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGAAATCCTGCATGTCCTaGGGGCAGCCACCACCCCAG +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLKSCMS*GQPPPQ
Trigger: CTGGGGTGGTGGCTGCCCCCAGGACATGCAGGATTT...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGTGCAGAGGGAGAGGCTaGAGGCTGTCGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLCRGRG*RLSRLP
Trigger: AGGCAGGCGCGACAGCCTTCAGCCTCTCCCTCTGCA...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR TCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGAAGCAGGCCCCGTGGTaGCAGACCACACACGGACGC +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWKQAPW*QTTHGR
Trigger: GCGTCCGTGTGTGGTCTGTCACCACGGGGCCTGCTT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCATCCCCAGCACGGGCCTaGACAGGACCAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPSPARA*TGPAAP
Trigger: AGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGA...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAGCTGTTTGCAAACTGTaGAGGGTCTCGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAAVCKL*RVSADA
Trigger: GGCATCTGCCGAGACCCTGCACAGTTTGCAAACAGC...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAACCTGTGCTGCCCCCTaGAGAAATCCTGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYATCAAP*RNPACP
Trigger: AGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGT...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCACAGCTGGCTCCTGGCTaGCTCACAGTCCGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LEAVCPLGGSSTPTSVQPQLAPG*LTVRLS
Trigger: AGAGAGGCGGACTGTGAGGCAGCCAGGAGCCAGCTG...TGGCTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGCCAGGTGGAAAGGCCTaGCCAGGAAAGTCGCCAGAA +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLPGGKA*PGKSPE
Trigger: TTCTGGCGACTTTCCTGGGCAGGCCTTTCCACCTGG...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGACCACGGCCCAGCTGTaGAGGATGAGCCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLTTAQL*RMSQLP
Trigger: GGGGAGCTGGCTCATCCTGCACAGCTGGGCCGTGGT...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGCGGGCCCAAGGCACGTaGAAATACCAAACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLRAQGT*KYQTAP
Trigger: TGGGGCTGTTTGGTATTTCCACGTGCCTTGGGCCCG...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR CCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCATTGACATGCTGCCGATaGCCGCTCTGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYALTCCR*PLCRIA
Trigger: AGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAA...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAGCCCAGCCATGCAAATaGTTGACATGCTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAAQPCK*LTCCRW
Trigger: CCATCGGCAGCATGTCAACCATTTGCATGGCTGGGC...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACTCACTGTGTCCGTGGTaGGCAGGCAACTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDSLCPW*AGNSQA
Trigger: TGCCTGAGAGTTGCCTGCTCACCACGGACACAGTGA...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGGCAGGGCACTGTAGCTaGAGATGCTGTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLAGHCS*RCCQQP
Trigger: AGGCTGTTGACAGCATCTTCAGCTACAGTGCCCTGC...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCACACGGCTCTGGTGTTaGCGGTGCACCAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCTRLWC*RCTKPT
Trigger: TGTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGT...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAAAGCAGGCCCCGTGGTaGCAGACCACACACGGACGC +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPKQAPW*QTTHGR
Trigger: GCGTCCGTGTGTGGTCTGTCACCACGGGGCCTGCTT...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCCCAGCTGTGCAGGATaGGCCAGCTCCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPPSCAG*ASSPGG
Trigger: TCCACCTGGGGAGCTGGCTCATCCTGCACAGCTGGG...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCAGGTACGGAGCGAGTaGACAGGTGTCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWQVRSE*TGVRLC
Trigger: GCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTG...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCCCTGCAGAAATCCTaGATGTCCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQPLQKS*MSWGQP
Trigger: TGGCTGCCCCCAGGACATGCAGGATTTCTGCAGGGG...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTCACCCACCGCCAATCTaGCCCTTAACCCAATGGTAT +
Preference number: 4 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVHPPPI*PLTQWY
Trigger: ATACCATTGGGTTAAGGGGCAGATTGGCGGTGGGTG...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAACCACGGCCCAGCTGTaGAGGATGAGCCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPTTAQL*RMSQLP
Trigger: GGGGAGCTGGCTCATCCTGCACAGCTGGGCCGTGGT...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGGGCATTCCCGCTGCCTaGGCCTCAGGTACACGGCTC +
Preference number: 4 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPGIPAA*ASGTRL
Trigger: GAGCCGTGTACCTGAGGCCCAGGCAGCGGGAATGCC...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGACACACGGACGCAGCTaGCTCCTGGCTGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWTHGRS*LLAASQ
Trigger: CTGTGAGGCAGCCAGGAGCCAGCTGCGTCCGTGTGT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGACACACGGACGCAGCTaGCTCCTGGCTGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLTHGRS*LLAASQ
Trigger: CTGTGAGGCAGCCAGGAGCCAGCTGCGTCCGTGTGT...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCATCACTGTGTCCGTGGTaGGCAGGCAACTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEAVCPLGGSSTPTSVQPSLCPW*AGNSQA
Trigger: TGCCTGAGAGTTGCCTGCTCACCACGGACACAGTGA...TGGCTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGAGACAAGCGCCACCTTaGGAGGCCAGGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQRQAPP*EARSML
Trigger: AAGCATGCTCCTGGCCTCTCAAGGTGGCGCTTGTCT...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTCTGCTGAGGACCACGTaGAGCCCGGTGACCGCCACA +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPLLRTT*SPVTAT
Trigger: TGTGGCGGTCACCGGGCTTCACGTGGTCCTCAGCAG...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR GCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACACCTGTGCTGCCCCCTaGAGAAATCCTGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDTCAAP*RNPACP
Trigger: AGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGT...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCAACACCCACCTCAGTaGAGCCACACAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWQHPPQ*SHTGKG
Trigger: GCCCTTCCCTGTGTGGCTGCACTGAGGTGGGTGTTG...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACTGCAAATGGTTGACATaGTGCCGATGGCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDCKWLT*CRWPLC
Trigger: GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCA...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAAGAGGCGAACGGCGGCTaGTTCGGTGCGGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQEANGG*FGAGPS
Trigger: GCTGGGACCCGCACCGAACCAGCCGCCGTTCGCCTC...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR TCA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTCTCATTCACTCCTCTTaGTTCAGAACTTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVLIHSS*FRTSAE
Trigger: CTCTGCGGAAGTTCTGAATCAAGAGGAGTGAATGAG...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399215.5
CDS-3UTR TCA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTGAGGGCCGTAACAGATaGATACCTCTTCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVEGRNR*IPLHAF
Trigger: GAAAGCATGAAGAGGTATTCATCTGTTACGGCCCTC...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGTGGTTCGCCATCAGCTaGCCTACACTGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: HAADGRSAESLGLRPQVQWFAIS*PTLNPR
Trigger: TCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCA...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAATCCCCAGCACGGGCCTaGACAGGACCAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQSPARA*TGPAAP
Trigger: AGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGA...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGAGCCATGCAAATGGTTaGCATGCTGCCGATGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWSHANG*HAADGR
Trigger: GCGGCCATCGGCAGCATGTCAACCATTTGCATGGCT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGACAGGTGTCCGGCTCTaGAGAAAGGCATTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWTGVRL*RKAFPL
Trigger: CAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTCAGCTGGCTCCTGGCTaGCTCACAGTCCGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPQLAPG*LTVRLS
Trigger: AGAGAGGCGGACTGTGAGGCAGCCAGGAGCCAGCTG...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACACAACACCCACCTCAGTaGAGCCACACAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTQHPPQ*SHTGKG
Trigger: GCCCTTCCCTGTGTGGCTGCACTGAGGTGGGTGTTG...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCATGCAAATGGTTGACATaGTGCCGATGGCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LEAVCPLGGSSTPTSVQPCKWLT*CRWPLC
Trigger: GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCA...TGGCTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAGCACACGATAATGCCTaGCCTGGAGGGGACCTGCGA +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPAHDNA*PGGDLR
Trigger: TCGCAGGTCCCCTCCAGGGCAGGCATTATCGTGTGC...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCGCGCCGGAGCAACATaGGCTAAGTGTAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWRAGAT*AKCRTP
Trigger: TGGAGTCCTACACTTAGCGCATGTTGCTCCGGCGCG...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGACGAGATCACGCCACTaGACTCCAACCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWTRSRH*TPTWAT
Trigger: TGTCGCCCAGGTTGGAGTGCAGTGGCGTGATCTCGT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR CCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCGGGCCCAAGGCACGTaGAAATACCAAACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWRAQGT*KYQTAP
Trigger: TGGGGCTGTTTGGTATTTCCACGTGCCTTGGGCCCG...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR CCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGGGGGTCAGGAAACTATaGCCCACCACCTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQGVRKL*PTTCRC
Trigger: ACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCC...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACACACGGCTCTGGTGTTaGCGGTGCACCAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PAIQTACPPSLTASQSQNTRLWC*RCTKPT
Trigger: TGTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGT...GTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGTCTCGGCAGATGCCCTaGGAATCTTTAGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: HAADGRSAESLGLRPQVQSRQMP*ESLALP
Trigger: CGGAAGAGCTAAAGATTCTCAGGGCATCTGCCGAGA...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCACCAAATGCGCTTCGGTaGAATCAGGTAAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAPNALR*NQVKAV
Trigger: AACAGCTTTTACCTGATTTCACCGAAGCGCATTTGG...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGCAACACCCACCTCAGTaGAGCCACACAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEQHPPQ*SHTGKG
Trigger: GCCCTTCCCTGTGTGGCTGCACTGAGGTGGGTGTTG...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGTGCAAATGGTTGACATaGTGCCGATGGCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLCKWLT*CRWPLC
Trigger: GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCA...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAAGGAAAAAGAAATTCTaGCATAGCACAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYARKKKF*HSTGVR
Trigger: CCTGACCCCTGTGCTATGCCAGAATTTCTTTTTCCT...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp AGTCCGCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGTGCAGAGGGAGAGGCTaGAGGCTGTCGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPPLSSQFSTLFGRALDLCRGRG*RLSRLP
Trigger: AGGCAGGCGCGACAGCCTTCAGCCTCTCCCTCTGCA...CAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR TCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCAAGCAGGCCCCGTGGTaGCAGACCACACACGGACGC +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAIKQAPW*QTTHGR
Trigger: GCGTCCGTGTGTGGTCTGTCACCACGGGGCCTGCTT...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCCCACCATCACCCTGCTaGGGACCACGTGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ALHRSLPTLHTAYDEIHCPPSPC*GPREAR
Trigger: CCGGGCTTCACGTGGTCCTCAGCAGGGTGATGGTGG...GCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR TCA 90 bp AGTCCGCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGGAGCCCGAGGCGGGCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SPPLSSQFSTLFGRALDLEPEAG*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGCCCGCCTCGGGCTC...CAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR GCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGAAGGCTGTCGCGCCTaGCTGGTGTCCTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTEGCRA*LVSLSN
Trigger: ATTGCTTAAGGACACCAGGCAGGCGCGACAGCCTTC...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR GCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAATTCCAAGATGGAGGCTaGAGTGGGCGGGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQFQDGG*SGRAQG
Trigger: GCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAA...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR GCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGCTGAAACTAAAAAGGTaGACAGCGCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HAADGRSAESLGLRPQVQLKLKR*TAPAEE
Trigger: CTCCTCTGCTGGCGCTGTGCACCTTTTTAGTTTCAG...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCGAGGAGGTGACCAAATaGGCTTCGGTGAAATCAGGT +
Preference number: 4 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCEEVTK*ASVKSG
Trigger: ACCTGATTTCACCGAAGCGCATTTGGTCACCTCCTC...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp AGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAACAGCTGGCTCCTGGCTaGCTCACAGTCCGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SIRPAIQTACPPSLTASQQLAPG*LTVRLS
Trigger: AGAGAGGCGGACTGTGAGGCAGCCAGGAGCCAGCTG...TTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTAGGACTACCTCACACTaGCCCACACCCACCGCCAAT +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPRTTSH*PTPTAN
Trigger: ATTGGCGGTGGGTGTGGGGCAGTGTGAGGTAGTCCT...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGAGGACTACCTCACACTaGCCCACACCCACCGCCAAT +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNERTTSH*PTPTAN
Trigger: ATTGGCGGTGGGTGTGGGGCAGTGTGAGGTAGTCCT...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCATTTTAAACTCTGCCTaGCTCCTGAGGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCILNSA*LLRPAG
Trigger: ACCTGCTGGCCTCAGGAGGCAGGCAGAGTTTAAAAT...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAGCTAGTCATTAAATCCTGCATGTCCTaGGGGCAGCCACCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PRKVARTKQKEPLAELVIKSCMS*GQPPPQ
Trigger: CTGGGGTGGTGGCTGCCCCCAGGACATGCAGGATTT...AATGACTAGCTCAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAGCGTCTGGGCCACCCTaGCGGGGATCCAGGACTACC +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAASGPP*RGSRTT
Trigger: GGTAGTCCTGGATCCCCGCCAGGGTGGCCCAGACGC...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGGGGGTCAGGAAACTATaGCCCACCACCTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPGVRKL*PTTCRC
Trigger: ACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCC...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACGCAGGGCACTGTAGCTaGAGATGCTGTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: PAIQTACPPSLTASQSQNAGHCS*RCCQQP
Trigger: AGGCTGTTGACAGCATCTTCAGCTACAGTGCCCTGC...GTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGCTTCTCATTCGTATCTaGAATTACCTCCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLLLIRI*NYLPKK
Trigger: CTTCTTGGGGAGGTAATTTCAGATACGAATGAGAAG...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACATCTCGGCAGATGCCCTaGGAATCTTTAGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTSRQMP*ESLALP
Trigger: CGGAAGAGCTAAAGATTCTCAGGGCATCTGCCGAGA...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTTGGTTCGCCATCAGCTaGCCTACACTGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPWFAIS*PTLNPR
Trigger: TCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCA...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCACCCCATCTCTCCTCTTaGTTCAGAACTTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPPHLSS*FRTSAE
Trigger: CTCTGCGGAAGTTCTGAATCAAGAGGAGAGATGGGG...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS-3UTR GCA 90 bp AGTCCGCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCAGGTACGGAGCGAGTaGACAGGTGTCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPPLSSQFSTLFGRALDLQVRSE*TGVRLC
Trigger: GCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTG...CAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGCGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAAGATGGAGGCTGCAGTaGGCGGGCCCAAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTARWRLQ*AGPRHV
Trigger: CACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCT...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR CCA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTAAGAGAAAAAGTCTCTaGAGGAAGCAAAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVKRKSL*RKQRTP
Trigger: AGGAGTTCTTTGCTTCCTCCAGAGACTTTTTCTCTT...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACGTCATTCTTCCCAAGTaGATAATTAGACAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDVILPK*IIRQAP
Trigger: TGGCGCTTGTCTAATTATTCACTTGGGAAGAATGAC...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTCCAAGATGGAGGCTaGAGTGGGCGGGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAFQDGG*SGRAQG
Trigger: GCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAA...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGGAAGCAAAGAACTCCTaGACGTGGGCTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEEAKNS*TWALCS
Trigger: AGAGCAGAGAGCCCACGTGCAGGAGTTCTTTGCTTC...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCCAGGTACGGAGCGAGTaGACAGGTGTCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTQVRSE*TGVRLC
Trigger: GCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTG...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAATTTTAAACTCTGCCTaGCTCCTGAGGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPILNSA*LLRPAG
Trigger: ACCTGCTGGCCTCAGGAGGCAGGCAGAGTTTAAAAT...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAGGTCCAGTTTTATTTTAAACTCTaGCTGCCTCCTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HAADGRSAESLGLRPQVQFYFKL*LPPEAS
Trigger: GCTGGCCTCAGGAGGCAGGCAGAGTTTAAAATAAAA...CTGGACCTGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGAAATGGTTGACATGCTaGCGATGGCCGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEKWLTC*RWPLCR
Trigger: TCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTT...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGGGCAGGTATACGCCTTaGGTAAAATCTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWGRYTP*VKSPGK
Trigger: CTTACCTGGAGATTTTACCCAAGGCGTATACCTGCC...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGTCCACCAAAGTTAGTTaGTTTATCAGGGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLSTKVS*FIRASF
Trigger: AAAAGAGGCCCTGATAAACCAACTAACTTTGGTGGA...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCACACACGGACGCAGCTaGCTCCTGGCTGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTTHGRS*LLAASQ
Trigger: CTGTGAGGCAGCCAGGAGCCAGCTGCGTCCGTGTGT...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAGCTAGTCATTTTGACATGCTGCCGATaGCCGCTCTGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: PRKVARTKQKEPLAELVILTCCR*PLCRIA
Trigger: AGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAA...AATGACTAGCTCAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGAGGAAAAAGAAATTCTaGCATAGCACAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQRKKKF*HSTGVR
Trigger: CCTGACCCCTGTGCTATGCCAGAATTTCTTTTTCCT...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp AGTCCGCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGTCACTGTGTCCGTGGTaGGCAGGCAACTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPPLSSQFSTLFGRALDLSLCPW*AGNSQA
Trigger: TGCCTGAGAGTTGCCTGCTCACCACGGACACAGTGA...CAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGCGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp AGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAAGCAGGGCACTGTAGCTaGAGATGCTGTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: SIRPAIQTACPPSLTASQAGHCS*RCCQQP
Trigger: AGGCTGTTGACAGCATCTTCAGCTACAGTGCCCTGC...TTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAGAGGGCCGTAACAGATaGATACCTCTTCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPEGRNR*IPLHAF
Trigger: GAAAGCATGAAGAGGTATTCATCTGTTACGGCCCTC...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTGAAAGAGCCGCTGGCTaGGCTAGTCATTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PSRQLVHLHSQPHNPRTCERAAG*ASHSSQ
Trigger: TTGGGAAGAATGACTAGCTCAGCCAGCGGCTCTTTC...ACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTTGCACGTGGGCTCTCTaGTCTTCAGCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPCTWAL*SSAFAF
Trigger: AAAAGCAAAGGCTGAAGAGCAGAGAGCCCACGTGCA...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCACAGGTGTCCGGCTCTaGAGAAAGGCATTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAITGVRL*RKAFPL
Trigger: CAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGT...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACTTCTTCATTAAACGCTaGTTTTACCTGGACATGTGG +
Preference number: 4 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDFFIKR*FYLDMW
Trigger: CCACATGTCCAGGTAAAAGCAGCGTTTAATGAAGAA...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAAGCTGTTTGCAAACTGTaGAGGGTCTCGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQAVCKL*RVSADA
Trigger: GGCATCTGCCGAGACCCTGCACAGTTTGCAAACAGC...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACACAGGTAAAAGCTGTTTaGAAACTGTGCAGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTQVKAV*KLCRVS
Trigger: CGAGACCCTGCACAGTTTGCAAACAGCTTTTACCTG...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGGAGGAGGTGACCAAATaGGCTTCGGTGAAATCAGGT +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEEEVTK*ASVKSG
Trigger: ACCTGATTTCACCGAAGCGCATTTGGTCACCTCCTC...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCCCAGGTGGAAAGGCCTaGCCAGGAAAGTCGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAIPGGKA*PGKSPE
Trigger: TTCTGGCGACTTTCCTGGGCAGGCCTTTCCACCTGG...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGATTTTAAACTCTGCCTaGCTCCTGAGGCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEILNSA*LLRPAG
Trigger: ACCTGCTGGCCTCAGGAGGCAGGCAGAGTTTAAAAT...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAGCTAGTCATTAAATGGTTGACATGCTaGCGATGGCCGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PRKVARTKQKEPLAELVIKWLTC*RWPLCR
Trigger: TCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTT...AATGACTAGCTCAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACTCCACCAAAGTTAGTTaGTTTATCAGGGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDSTKVS*FIRASF
Trigger: AAAAGAGGCCCTGATAAACCAACTAACTTTGGTGGA...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAAAATCCTGCATGTCCTaGGGGCAGCCACCACCCCAG +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSKSCMS*GQPPPQ
Trigger: CTGGGGTGGTGGCTGCCCCCAGGACATGCAGGATTT...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCACCCAAGGTCTGCGTaGTATCAAAACTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQHPRSA*YQNSRI
Trigger: TATTCTTGAGTTTTGATACCACGCAGACCTTGGGTG...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp AGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAAGGGGTCAGGAAACTATaGCCCACCACCTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: SIRPAIQTACPPSLTASQGVRKL*PTTCRC
Trigger: ACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCC...TTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACAGAGTTTTCGTCTTCTaGTCCGGCTTGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PAIQTACPPSLTASQSQNRVFVF*SGLFSL
Trigger: AAGGGAGAACAAGCCGGATCAGAAGACGAAAACTCT...GTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCATGCTTTCTCCAACGTaGAGTCGTTCTAATTTCGTA +
Preference number: 4 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCMLSPT*SRSNFV
Trigger: TACGAAATTAGAACGACTTCACGTTGGAGAAAGCAT...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAAGCCATGCAAATGGTTaGCATGCTGCCGATGGCCGC +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSSHANG*HAADGR
Trigger: GCGGCCATCGGCAGCATGTCAACCATTTGCATGGCT...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCAGCCATGCAAATGGTTaGCATGCTGCCGATGGCCGC +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTSHANG*HAADGR
Trigger: GCGGCCATCGGCAGCATGTCAACCATTTGCATGGCT...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTTGCACGTGGGCTCTCTaGTCTTCAGCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PSRQLVHLHSQPHNPRTCCTWAL*SSAFAF
Trigger: AAAAGCAAAGGCTGAAGAGCAGAGAGCCCACGTGCA...ACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp AGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAAGAAGCAAAGAACTCCTaGACGTGGGCTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SIRPAIQTACPPSLTASQEAKNS*TWALCS
Trigger: AGAGCAGAGAGCCCACGTGCAGGAGTTCTTTGCTTC...TTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAACAGGTGTCCGGCTCTaGAGAAAGGCATTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSTGVRL*RKAFPL
Trigger: CAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGT...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGATGAATACCTCTTCATaGTTTCTCCAACGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQMNTSS*FLQREV
Trigger: GACTTCACGTTGGAGAAAGCATGAAGAGGTATTCAT...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCAGGTAAAAGCTGTTTaGAAACTGTGCAGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PAIQTACPPSLTASQSQNQVKAV*KLCRVS
Trigger: CGAGACCCTGCACAGTTTGCAAACAGCTTTTACCTG...GTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGTTTTATTTTAAACTCTaGCTGCCTCCTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPFYFKL*LPPEAS
Trigger: GCTGGCCTCAGGAGGCAGGCAGAGTTTAAAATAAAA...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAGTCATTCTTCCCAAGTaGATAATTAGACAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPVILPK*IIRQAP
Trigger: TGGCGCTTGTCTAATTATTCACTTGGGAAGAATGAC...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTTTCCAAAGAGATCGGTaGCCAGCATGCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPFQRDR*PACFSE
Trigger: TTCAGAAAAGCATGCTGGGCACCGATCTCTTTGGAA...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGTTCTTCATTAAACGCTaGTTTTACCTGGACATGTGG +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWFFIKR*FYLDMW
Trigger: CCACATGTCCAGGTAAAAGCAGCGTTTAATGAAGAA...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGATGAATACCTCTTCATaGTTTCTCCAACGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWMNTSS*FLQREV
Trigger: GACTTCACGTTGGAGAAAGCATGAAGAGGTATTCAT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACTTTTATTTTAAACTCTaGCTGCCTCCTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAIQTACPPSLTASQSQNFYFKL*LPPEAS
Trigger: GCTGGCCTCAGGAGGCAGGCAGAGTTTAAAATAAAA...GTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCACCTGGAGCCCAGCCATaGAAATGGTTGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAPGAQP*KWLTCC
Trigger: GCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGG...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAGCCCTGGAGGGGACCTaGGACCTAAACTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAALEGT*DLNSVL
Trigger: AAGAACTGAGTTTAGGTCGCAGGTCCCCTCCAGGGC...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR CCA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGATAAATTCAGACTTGTaGCTCTCATTCACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQINSDL*LSFTPL
Trigger: AAGAGGAGTGAATGAGAGCCACAAGTCTGAATTTAT...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399215.5
CDS-3UTR CCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGTTTTACCTGGACATGTaGGCTATGATTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEFYLDM*AMIQQV
Trigger: GACCTGCTGAATCATAGCCCACATGTCCAGGTAAAA...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACTTTTACCTGGACATGTaGGCTATGATTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PAIQTACPPSLTASQSQNFYLDM*AMIQQV
Trigger: GACCTGCTGAATCATAGCCCACATGTCCAGGTAAAA...GTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGGGAAGGGCTGGCGTCTaGGCCACCCTGGCGGGGATC +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKGRAGV*ATLAGI
Trigger: GATCCCCGCCAGGGTGGCCCAGACGCCAGCCCTTCC...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAGCCCAGCCATGCAAATaGTTGACATGCTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSAQPCK*LTCCRW
Trigger: CCATCGGCAGCATGTCAACCATTTGCATGGCTGGGC...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TGGTTGACATGCTGCCGATGGCCGCTCTGCAGAATCGCTGGGACTAAGACCACAATGCTTTCTCCAACGTaGAGTCGTTCTAATTTCGTA +
Preference number: 4 (lower is better)
Translates to: WLTCCRWPLCRIAGTKTTMLSPT*SRSNFV
Trigger: TACGAAATTAGAACGACTTCACGTTGGAGAAAGCAT...TGTGGTCTTAGTCCCAGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCTCTCGGCAGATGCCCTaGGAATCTTTAGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTSRQMP*ESLALP
Trigger: CGGAAGAGCTAAAGATTCTCAGGGCATCTGCCGAGA...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGTCATTCTTCCCAAGTaGATAATTAGACAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPVILPK*IIRQAP
Trigger: TGGCGCTTGTCTAATTATTCACTTGGGAAGAATGAC...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAGAAAGAGCCGCTGGCTaGGCTAGTCATTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAERAAG*ASHSSQ
Trigger: TTGGGAAGAATGACTAGCTCAGCCAGCGGCTCTTTC...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCGAAAGAGCCGCTGGCTaGGCTAGTCATTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTERAAG*ASHSSQ
Trigger: TTGGGAAGAATGACTAGCTCAGCCAGCGGCTCTTTC...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGCGGGAGGACTGCTTaGGGCCAGGAGTTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIGGRTA*GQEFEP
Trigger: GGGCTCAAACTCCTGGCCTCAAGCAGTCCTCCCGCC...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS-3UTR TCA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAAATACGAGGGCAGAAATaGGCAAGAGACAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQIRGQK*ARDKNS
Trigger: GGAGTTCTTGTCTCTTGCTCATTTCTGCCCTCGTAT...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR TCA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGAAGTGCTTTTGTACATaGAACGTTTATACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWKCFCT*NVYTVS
Trigger: GCTCACAGTATAAACGTTTCATGTACAAAAGCACTT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR GCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCTGCACGTGGGCTCTCTaGTCTTCAGCCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAICTWAL*SSAFAF
Trigger: AAAAGCAAAGGCTGAAGAGCAGAGAGCCCACGTGCA...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCGAAGCAAAGAACTCCTaGACGTGGGCTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTEAKNS*TWALCS
Trigger: AGAGCAGAGAGCCCACGTGCAGGAGTTCTTTGCTTC...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGTTCTTCATTAAACGCTaGTTTTACCTGGACATGTGG +
Preference number: 4 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPFFIKR*FYLDMW
Trigger: CCACATGTCCAGGTAAAAGCAGCGTTTAATGAAGAA...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCCCCTCCACAGAAGTCTaGCCACTCTCCATACAGCAT +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTPSTEV*PLSIQH
Trigger: ATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCACCCTCCACAGAAGTCTaGCCACTCTCCATACAGCAT +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAPSTEV*PLSIQH
Trigger: ATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACCCTCCACAGAAGTCTaGCCACTCTCCATACAGCAT +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSPSTEV*PLSIQH
Trigger: ATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGGCGTCTGGGCCACCCTaGCGGGGATCCAGGACTACC +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKASGPP*RGSRTT
Trigger: GGTAGTCCTGGATCCCCGCCAGGGTGGCCCAGACGC...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAGAGTTTTCGTCTTCTaGTCCGGCTTGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ALHRSLPTLHTAYDEIHCRVFVF*SGLFSL
Trigger: AAGGGAGAACAAGCCGGATCAGAAGACGAAAACTCT...GCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCCTCATTCACTCCTCTTaGTTCAGAACTTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAILIHSS*FRTSAE
Trigger: CTCTGCGGAAGTTCTGAATCAAGAGGAGTGAATGAG...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399215.5
CDS-3UTR TCA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGATGCTTTCTCCAACGTaGAGTCGTTCTAATTTCGTA +
Preference number: 4 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEMLSPT*SRSNFV
Trigger: TACGAAATTAGAACGACTTCACGTTGGAGAAAGCAT...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTAAGACAAGCGCCACCTTaGGAGGCCAGGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: STEVCPLSIQHMMKYTALRQAPP*EARSML
Trigger: AAGCATGCTCCTGGCCTCTCAAGGTGGCGCTTGTCT...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp AGTCCGCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCAGGTAAAAGCTGTTTaGAAACTGTGCAGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SPPLSSQFSTLFGRALDLQVKAV*KLCRVS
Trigger: CGAGACCCTGCACAGTTTGCAAACAGCTTTTACCTG...CAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGCGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAGAGGAGGTGACCAAATaGGCTTCGGTGAAATCAGGT +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSEEVTK*ASVKSG
Trigger: ACCTGATTTCACCGAAGCGCATTTGGTCACCTCCTC...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACCCCCTGCAGAAATCCTaGATGTCCTGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYPLQKS*MSWGQP
Trigger: TGGCTGCCCCCAGGACATGCAGGATTTCTGCAGGGG...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGACCACGGCCCAGCTGTaGAGGATGAGCCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKTTAQL*RMSQLP
Trigger: GGGGAGCTGGCTCATCCTGCACAGCTGGGCCGTGGT...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCAGAGTTTTCGTCTTCTaGTCCGGCTTGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTRVFVF*SGLFSL
Trigger: AAGGGAGAACAAGCCGGATCAGAAGACGAAAACTCT...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAACACGGCTCTGGTGTTaGCGGTGCACCAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: GLSVLKGEKELTYLGPLITRLWC*RCTKPT
Trigger: TGTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGT...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCCCAAATGCGCTTCGGTaGAATCAGGTAAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAIPNALR*NQVKAV
Trigger: AACAGCTTTTACCTGATTTCACCGAAGCGCATTTGG...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTAGCTGTTTGCAAACTGTaGAGGGTCTCGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: STEVCPLSIQHMMKYTALAVCKL*RVSADA
Trigger: GGCATCTGCCGAGACCCTGCACAGTTTGCAAACAGC...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCAAGATGAGAGGTTACTaGAGCGCACACGATAATGCC +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTKMRGY*SAHDNA
Trigger: GGCATTATCGTGTGCGCTGCAGTAACCTCTCATCTT...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR CCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAGGCAGGTATACGCCTTaGGTAAAATCTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSGRYTP*VKSPGK
Trigger: CTTACCTGGAGATTTTACCCAAGGCGTATACCTGCC...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCGGCAGGTATACGCCTTaGGTAAAATCTCCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTGRYTP*VKSPGK
Trigger: CTTACCTGGAGATTTTACCCAAGGCGTATACCTGCC...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTTGCCCCTTAACCCAATaGTATCAGAGCATCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PSRQLVHLHSQPHNPRTCCPLTQ*YQSILK
Trigger: TTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCA...ACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCAGGAAAAAGAAATTCTaGCATAGCACAGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAIRKKKF*HSTGVR
Trigger: CCTGACCCCTGTGCTATGCCAGAATTTCTTTTTCCT...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp AGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAAGCTAAGTTTGAATCTTaGAACTTCCTAGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SIRPAIQTACPPSLTASQAKFES*NFLAFS
Trigger: GCTGAAAGCTAGGAAGTTTCAAGATTCAAACTTAGC...TTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp GCCTCTCTCCTCACAGTTCAGCACTTTATTCGGAAGAGCATTAGACCTGCCATCGCTAAGTTTGAATCTTaGAACTTCCTAGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ASLLTVQHFIRKSIRPAIAKFES*NFLAFS
Trigger: GCTGAAAGCTAGGAAGTTTCAAGATTCAAACTTAGC...GATGGCAGGTCTAATGCTCTTCCGAATAAAGTGCTGAACTGTGAGGAGAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCACTTCTCATTCGTATCTaGAATTACCTCCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTALLIRI*NYLPKK
Trigger: CTTCTTGGGGAGGTAATTTCAGATACGAATGAGAAG...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACAAATGGTTGACATGCTaGCGATGGCCGCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYKWLTC*RWPLCR
Trigger: TCTGCAGAGCGGCCATCGGCAGCATGTCAACCATTT...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATACCTGGAGCCCAGCCATaGAAATGGTTGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIPGAQP*KWLTCC
Trigger: GCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGG...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GCCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCTGCCCCTTAACCCAATaGTATCAGAGCATCTTAAAA +
Preference number: 4 (lower is better)
Translates to: ALHRSLPTLHTAYDEIHCCPLTQ*YQSILK
Trigger: TTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCA...GCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCACACCCAAGGTCTGCGTaGTATCAAAACTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSHPRSA*YQNSRI
Trigger: TATTCTTGAGTTTTGATACCACGCAGACCTTGGGTG...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGCCCAGCCATGCAAATaGTTGACATGCTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIAQPCK*LTCCRW
Trigger: CCATCGGCAGCATGTCAACCATTTGCATGGCTGGGC...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAGCTAAGTTTGAATCTTaGAACTTCCTAGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAAKFES*NFLAFS
Trigger: GCTGAAAGCTAGGAAGTTTCAAGATTCAAACTTAGC...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGGAAGGCTGTCGCGCCTaGCTGGTGTCCTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKEGCRA*LVSLSN
Trigger: ATTGCTTAAGGACACCAGGCAGGCGCGACAGCCTTC...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399212.5
CDS-3UTR GCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGACCTGTGCTGCCCCCTaGAGAAATCCTGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKTCAAP*RNPACP
Trigger: AGGACATGCAGGATTTCTGCAGGGGGCAGCACAGGT...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATACACCCACCGCCAATCTaGCCCTTAACCCAATGGTAT +
Preference number: 4 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIHPPPI*PLTQWY
Trigger: ATACCATTGGGTTAAGGGGCAGATTGGCGGTGGGTG...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGCCTGGAGCCCAGCCATaGAAATGGTTGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKPGAQP*KWLTCC
Trigger: GCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGG...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCAAGAGAAAAAGTCTCTaGAGGAAGCAAAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTKRKSL*RKQRTP
Trigger: AGGAGTTCTTTGCTTCCTCCAGAGACTTTTTCTCTT...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGTTGACATGCTGCCGATaGCCGCTCTGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKLTCCR*PLCRIA
Trigger: AGCGATTCTGCAGAGCGGCCATCGGCAGCATGTCAA...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAATAAGGTTCATTATTTaGCCTAACGAAAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAIRFII*PNESRH
Trigger: ATGCCGACTTTCGTTAGGTCAAATAATGAACCTTAT...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS-3UTR GCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATTCCAAAGAGATCGGTaGCCAGCATGCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: STEVCPLSIQHMMKYTALFQRDR*PACFSE
Trigger: TTCAGAAAAGCATGCTGGGCACCGATCTCTTTGGAA...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp CACTTTATTCGGAAGAGCATTAGACCTGCCATCCAGACAGCTTGTCCACCTTCAATAAATTCAGACTTGTaGCTCTCATTCACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HFIRKSIRPAIQTACPPSINSDL*LSFTPL
Trigger: AAGAGGAGTGAATGAGAGCCACAAGTCTGAATTTAT...TGAAGGTGGACAAGCTGTCTGGATGGCAGGTCTAATGCTCTTCCGAATAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399215.5
CDS-3UTR TCA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACCCAAATGCGCTTCGGTaGAATCAGGTAAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYPNALR*NQVKAV
Trigger: AACAGCTTTTACCTGATTTCACCGAAGCGCATTTGG...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGCACCCACCGCCAATCTaGCCCTTAACCCAATGGTAT +
Preference number: 4 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKHPPPI*PLTQWY
Trigger: ATACCATTGGGTTAAGGGGCAGATTGGCGGTGGGTG...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACTTTTACCTGGACATGTaGGCTATGATTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYFYLDM*AMIQQV
Trigger: GACCTGCTGAATCATAGCCCACATGTCCAGGTAAAA...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGGAGGGCCGTAACAGATaGATACCTCTTCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKEGRNR*IPLHAF
Trigger: GAAAGCATGAAGAGGTATTCATCTGTTACGGCCCTC...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATTCACTAGGCTCCAATaGGAAAGGAATTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: STEVCPLSIQHMMKYTALFTRLQ*ERNLSS
Trigger: AGAACTCAAATTCCTTTCTCATTGGAGCCTAGTGAA...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR GCA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATATTCCAAAGAGATCGGTaGCCAGCATGCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIFQRDR*PACFSE
Trigger: TTCAGAAAAGCATGCTGGGCACCGATCTCTTTGGAA...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTAAAGAGAAAAAGTCTCTaGAGGAAGCAAAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: STEVCPLSIQHMMKYTALKRKSL*RKQRTP
Trigger: AGGAGTTCTTTGCTTCCTCCAGAGACTTTTTCTCTT...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATCCACCAAAGTTAGTTaGTTTATCAGGGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: STEVCPLSIQHMMKYTALSTKVS*FIRASF
Trigger: AAAAGAGGCCCTGATAAACCAACTAACTTTGGTGGA...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACTTCACTAGGCTCCAATaGGAAAGGAATTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYFTRLQ*ERNLSS
Trigger: AGAACTCAAATTCCTTTCTCATTGGAGCCTAGTGAA...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGCACCCAAGGTCTGCGTaGTATCAAAACTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKHPRSA*YQNSRI
Trigger: TATTCTTGAGTTTTGATACCACGCAGACCTTGGGTG...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR TCA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGTTCACTAGGCTCCAATaGGAAAGGAATTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKFTRLQ*ERNLSS
Trigger: AGAACTCAAATTCCTTTCTCATTGGAGCCTAGTGAA...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS TCA 90 bp GGGCCCTCGCGCGAGCTGTCCACCATCACCCTGCTGAGGACCACGTaGAGCCCGGTGACCGCCACAGACACAGGCACCGTCCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: GPSRELSTITLLRTT*SPVTATDTGTVPAP
Trigger: GGGGGCGGGGACGGTGCCTGTGTCTGTGGCGGTCACCGGGCTTCACGTGGTCCTCAGCAGGGTGATGGTGGACAGCTCGCGCGAGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399215.5
ENST00000443703.1
CDS GCA 90 bp AAAGTCGGCATGTCCAGCTCCAGAGGCGAACGGCGGCTGGTTCGGTaGGGGTCCCAGCGCTCAGTCCACAGACCGCGCCGGGAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: KVGMSSSRGERRLVR*GSQRSVHRPRREVS
Trigger: GGACACTTCCCGGCGCGGTCTGTGGACTGAGCGCTGGGACCCGCACCGAACCAGCCGCCGTTCGCCTCTGGAGCTGGACATGCCGACTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399215.5
ENST00000443703.1
CDS CCA 90 bp GGAAATGCTCAATCCCGCCGACTCTGCTCCCGTTACCCGGGCAACTaGAGGCCCGACCCGGAAGTCCTACTAGCTCACCTAGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: GNAQSRRLCSRYPGN*RPDPEVLLAHLGAG
Trigger: GCCGGCGCCTAGGTGAGCTAGTAGGACTTCCGGGTCGGGCCTCCAGTTGCCCGGGTAACGGGAGCAGAGTCGGCGGGATTGAGCATTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399208.6
CDS GCA 90 bp GGAGCGAGTGCACAGGTGTCCGGCTCTGCAGAAAGGCATTCCCGCTaGCTGGGCCTCAGGTACACGGCTCTGGTGTTGACGGTGCACCAA +
Preference number: 5 (lower is better)
Translates to: GASAQVSGSAERHSR*LGLRYTALVLTVHQ
Trigger: TTGGTGCACCGTCAACACCAGAGCCGTGTACCTGAGGCCCAGGCAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGTGCACTCGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000481477.5
CDS-3UTR CAA 90 bp GACCAGCAGCCCCTCCGTTACTTACGCAGGCAGTTCCAAGGCCACAGGCCGCTGGGACTCTGGGCAACATaGTCTAAGCGGCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: DQQPLRYLRRQFQGHRPLGLWAT*SKRRPQ
Trigger: CTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC...CAGCGGCCTGTGGCCTTGGAACTGCCTGCGTAAGTAACGGAGGGGCTGCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp TGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTCAGCCATGCAAATGGTaGACATGCTGCCGATGGCCG +
Preference number: 5 (lower is better)
Translates to: CLSGVPSTGLNRTSSPSVQPCKW*TCCRWP
Trigger: CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTG...AACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS GCA 90 bp ATTCAGCAGGTCCAGGTACGGAGCGAGTGCACAGGTGTCCGGCTCTaGAGAAAGGCATTCCCGCTGCCTGGGCCTCAGGTACACGGCTCT +
Preference number: 5 (lower is better)
Translates to: IQQVQVRSECTGVRL*RKAFPLPGPQVHGS
Trigger: AGAGCCGTGTACCTGAGGCCCAGGCAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTGGACCTGCTGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS GCA 90 bp GAAATGCTCAATCTAGGCGCCGGCGGCCGCTTCCAAGATGGAGGCTaGAGTGGGCGGGCCCAAGGCACGTGGAAATACCAAACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: EMLNLGAGGRFQDGG*SGRAQGTWKYQTAP
Trigger: TGGGGCTGTTTGGTATTTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCTAGATTGAGCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS GCA 90 bp CTGGACATGTGGGCTATGATTCAGCAGGTCCAGGTACGGAGCGAGTaGACAGGTGTCCGGCTCTGCAGAAAGGCATTCCCGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LDMWAMIQQVQVRSE*TGVRLCRKAFPLPG
Trigger: CCCAGGCAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTGGACCTGCTGAATCATAGCCCACATGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS-3UTR CAA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCATTCCAGGAACAGCCGTaGATTATCGTGAGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAFQEQP*IIVRAV
Trigger: TACGGCCCTCACGATAATCAACGGCTGTTCCTGGAA...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp CTCCTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGGGACTCTGGGCAACATaGTCTAAGCGGCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LLEAVCPLGGSSTPTSVQGLWAT*SKRRPQ
Trigger: CTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC...CTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACGCCCACCACCTGTCGTaGTCAGTAGTTTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDAHHLS*SVVSLE
Trigger: CTCCAGGGAAACTACTGACAACGACAGGTGGTGGGC...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS GCA 90 bp TCGGGCCTCAGGCTCCTCAGCTTTACGCAGCGCGCCGGAGCAACATaGGCTAAGTGTAGGACTCCACAAGATGAGAGGTTACTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: SGLRLLSFTQRAGAT*AKCRTPQDERLLQR
Trigger: GCGCTGCAGTAACCTCTCATCTTGTGGAGTCCTACACTTAGCGCATGTTGCTCCGGCGCGCTGCGTAAAGCTGAGGAGCCTGAGGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399207.5
ENST00000399215.5
ENST00000443703.1
CDS CCA 90 bp TTCTGTGGAAATGCTCAATCTAGGCGCCGGCGGCCGCTTCCAAGATaGAGGCTGCAGTGGGCGGGCCCAAGGCACGTGGAAATACCAAAC +
Preference number: 5 (lower is better)
Translates to: FCGNAQSRRRRPLPR*RLQWAGPRHVEIPN
Trigger: GTTTGGTATTTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCTAGATTGAGCATTTCCACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS-3UTR CAA 90 bp CTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCACAGCCATGCAAATGGTaGACATGCTGCCGATGGCCG +
Preference number: 5 (lower is better)
Translates to: LEAVCPLGGSSTPTSVQPQPCKW*TCCRWP
Trigger: CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTG...TGGCTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCATACACGGCTCTGGTGTaGACGGTGCACCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPYTALV*TVHQAH
Trigger: GTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGTA...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp AGTAGTTTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGGGACTCTGGGCAACATaGTCTAAGCGGCGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSFPGAQPCKWLTCCRWPGLWAT*SKRRPQ
Trigger: CTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC...CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAAACTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGGCCCACCACCTGTCGTaGTCAGTAGTTTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLAHHLS*SVVSLE
Trigger: CTCCAGGGAAACTACTGACAACGACAGGTGGTGGGC...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGTGCCATCCAGACAGCTaGTCCACCTTCACTCACAGC +
Preference number: 5 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWCHPDS*STFTHS
Trigger: GCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCA...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGCGTCCCCAGCACGGGCCTGAACAGGACCAGCAGCCCCTCCGTTACTTACGCAAAGGAATTTGAGTTCTaGGGAAGAATGAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GVPSTGLNRTSSPSVTYAKEFEF*GRMNPG
Trigger: CCCAGGGTTCATTCTTCCCAAGAACTCAAATTCCTT...TGCGTAAGTAACGGAGGGGCTGCTGGTCCTGTTCAGGCCCGTGCTGGGGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS GCA 90 bp GAGCAACATGCGCTAAGTGTAGGACTCCACAAGATGAGAGGTTACTaGAGCGCACACGATAATGCCTGCCCTGGAGGGGACCTGCGACCT +
Preference number: 5 (lower is better)
Translates to: EQHALSVGLHKMRGY*SAHDNACPGGDLRP
Trigger: AGGTCGCAGGTCCCCTCCAGGGCAGGCATTATCGTGTGCGCTGCAGTAACCTCTCATCTTGTGGAGTCCTACACTTAGCGCATGTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399207.5
ENST00000399215.5
ENST00000443703.1
CDS-3UTR CAA 90 bp GGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGTTCCAGGAACAGCCGTaGATTATCGTGAGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: GKACPGKSPEQSRKSRWLFQEQP*IIVRAV
Trigger: TACGGCCCTCACGATAATCAACGGCTGTTCCTGGAA...CAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGACTCTGGGCAACATTGTCTAAGCGGCGTCCCCAGCACGGGCCTGAACAGGACGGGCTATGTCCAAACTaGTCTTCTCATTCGTATCTG +
Preference number: 5 (lower is better)
Translates to: GLWATLSKRRPQHGPEQDGLCPN*SSHSYL
Trigger: CAGATACGAATGAGAAGACAAGTTTGGACATAGCCC...GTCCTGTTCAGGCCCGTGCTGGGGACGCCGCTTAGACAATGTTGCCCAGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp CCATCCAGACAGCTTGTCCACCTTCACTCACAGCCTCACAATCCCAGAACCTGTGCCCACCACCTGTCGTaGTCAGTAGTTTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSRQLVHLHSQPHNPRTCAHHLS*SVVSLE
Trigger: CTCCAGGGAAACTACTGACAACGACAGGTGGTGGGC...ACAGGTTCTGGGATTGTGAGGCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS GCA 90 bp TCCAAAGAGATCGGTGCCCAGCATGCTTTTCTGAAACTAAAAAGGTaGACAGCGCCAGCAGAGGAGATGGAGGAGGCTTCCACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SKEIGAQHAFLKLKR*TAPAEEMEEASTCR
Trigger: CCTGCAGGTGGAAGCCTCCTCCATCTCCTCTGCTGGCGCTGTGCACCTTTTTAGTTTCAGAAAAGCATGCTGGGCACCGATCTCTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481477.5
CDS-3UTR CAA 90 bp GCCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCTACACGGCTCTGGTGTaGACGGTGCACCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ALHRSLPTLHTAYDEIHCYTALV*TVHQAH
Trigger: GTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGTA...GCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp TTCCCTGGAGCCCAGCCATGCAAATGGTTGACATGCTGCCGATGGCCGCTCTGCGGGCTATGTCCAAACTaGTCTTCTCATTCGTATCTG +
Preference number: 5 (lower is better)
Translates to: FPGAQPCKWLTCCRWPLCGLCPN*SSHSYL
Trigger: CAGATACGAATGAGAAGACAAGTTTGGACATAGCCC...GCAGAGCGGCCATCGGCAGCATGTCAACCATTTGCATGGCTGGGCTCCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAACCCCATCTCTCCTCTaGATTCAGAACTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPTPSLL*IQNFRR
Trigger: TCTGCGGAAGTTCTGAATCAAGAGGAGAGATGGGGT...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS GCA 90 bp GGACTCCACAAGATGAGAGGTTACTGCAGCGCACACGATAATGCCTaGCCTGGAGGGGACCTGCGACCTAAACTCAGTTCTTTTTACGCT +
Preference number: 5 (lower is better)
Translates to: GLHKMRGYCSAHDNA*PGGDLRPKLSSFYA
Trigger: AGCGTAAAAAGAACTGAGTTTAGGTCGCAGGTCCCCTCCAGGGCAGGCATTATCGTGTGCGCTGCAGTAACCTCTCATCTTGTGGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS CCA 90 bp GGTTCACCACTTCCGGCTCCAAACAAACAGGGCAGGTATACGCCTTaGGTAAAATCTCCAGGTAAGGCTTCCAAAGAGATCGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GSPLPAPNKQGRYTP*VKSPGKASKEIGAQ
Trigger: CTGGGCACCGATCTCTTTGGAAGCCTTACCTGGAGATTTTACCCAAGGCGTATACCTGCCCTGTTTGTTTGGAGCCGGAAGTGGTGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000481477.5
ENST00000485865.1
CDS-3UTR CAA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAACTCCTGCAGGGATGTTaGACTCATCAGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQLLQGC*THQPSS
Trigger: GGAAGAGGGCTGATGAGTCAAACATCCCTGCAGGAG...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp CTGGAAGCTGTGTGTCCCCTAGGGGGCTCTTCAACACCCACCTCAGTGCAGCCAAAGGGGCTGTCCGTTTaGAAAGGTGAAAAGGAATTA +
Preference number: 5 (lower is better)
Translates to: LEAVCPLGGSSTPTSVQPKGLSV*KGEKEL
Trigger: TAATTCCTTTTCACCTTTCAAAACGGACAGCCCCTT...TGGCTGCACTGAGGTGGGTGTTGAAGAGCCCCCTAGGGGACACACAGCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS CCA 90 bp CCTGCACGTGGGCTCTCTGCTCTTCAGCCTTTGCTTTTAAAGATTTaGGAAGAAGGTTCACCACTTCCGGCTCCAAACAAACAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PARGLSALQPLLLKI*EEGSPLPAPNKQGR
Trigger: CCTGCCCTGTTTGTTTGGAGCCGGAAGTGGTGAACCTTCTTCCCAAATCTTTAAAAGCAAAGGCTGAAGAGCAGAGAGCCCACGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000481477.5
ENST00000485865.1
CDS-3UTR CAA 90 bp GGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTGGAGCCCAGCCAAAGGAATTTGAGTTCTaGGGAAGAATGAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GNYGPPPVVVSSFPGAQPKEFEF*GRMNPG
Trigger: CCCAGGGTTCATTCTTCCCAAGAACTCAAATTCCTT...TGGCTGGGCTCCAGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGTGGAAAGGCCTGCCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGAAGGGGCTGTCCGTTTaGAAAGGTGAAAAGGAATTA +
Preference number: 5 (lower is better)
Translates to: GGKACPGKSPEQSRKSRWKGLSV*KGEKEL
Trigger: TAATTCCTTTTCACCTTTCAAAACGGACAGCCCCTT...CCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGGCAGGCCTTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS TCA 90 bp CACATCACGACTGCCTCACAGACAGCAGCAGCTCCCTTGGCATACTaGAAACGTGATCTGACATGTAACATGTGCTGTGGCAGAGATTGC +
Preference number: 5 (lower is better)
Translates to: HITTASQTAAAPLAY*KRDLTCNMCCGRDC
Trigger: GCAATCTCTGCCACAGCACATGTTACATGTCAGATCACGTTTTCAGTATGCCAAGGGAGCTGCTGCTGTCTGTGAGGCAGTCGTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460704.1
CDS-3UTR CAA 90 bp GCACAGGGGTCAGGAAACTATGGCCCACCACCTGTCGTTGTCAGTAGTTTCCCTTCTCATTCACTCCTCTaGATTCAGAACTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: AQGSGNYGPPPVVVSSFPSHSLL*IQNFRR
Trigger: TCTGCGGAAGTTCTGAATCAAGAGGAGTGAATGAGA...AGGGAAACTACTGACAACGACAGGTGGTGGGCCATAGTTTCCTGACCCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399215.5
CDS-3UTR CAA 90 bp CAAACCACCACCATGGTTCGCCATCAGCTGACCTACACTGAACCCCAGAATCAAGCAGGTCCCGTTCATTaGGTTTCACTAGGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: QTTTMVRHQLTYTEPQNQAGPVH*VSLGSN
Trigger: ATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGC...TTGATTCTGGGGTTCAGTGTAGGTCAGCTGATGGCGAACCATGGTGGTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCTTCCAGGAACAGCCGTaGATTATCGTGAGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTFQEQP*IIVRAV
Trigger: TACGGCCCTCACGATAATCAACGGCTGTTCCTGGAA...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp CCCAGGAAAGTCGCCAGAACAAAGCAGAAAGAGCCGCTGGCTGAGCTAGTCATTGGGCTATGTCCAAACTaGTCTTCTCATTCGTATCTG +
Preference number: 5 (lower is better)
Translates to: PRKVARTKQKEPLAELVIGLCPN*SSHSYL
Trigger: CAGATACGAATGAGAAGACAAGTTTGGACATAGCCC...AATGACTAGCTCAGCCAGCGGCTCTTTCTGCTTTGTTCTGGCGACTTTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp TGCCTCCTGAGGCCAGCAGGTCCCGTTCATTTGGTTTCACTAGGCTCCAATGAGAAGGGGCTGTCCGTTTaGAAAGGTGAAAAGGAATTA +
Preference number: 5 (lower is better)
Translates to: CLLRPAGPVHLVSLGSNEKGLSV*KGEKEL
Trigger: TAATTCCTTTTCACCTTTCAAAACGGACAGCCCCTT...CTCATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGCTGGCCTCAGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS TCA 90 bp CAGGCAATATTAATACCGCACTTCCGCAGTATAAGGTTCATTATTTaGCCTAACGAAAGTCGGCATGTCCAGCTCCAGAGGCGAACGGCG +
Preference number: 5 (lower is better)
Translates to: QAILIPHFRSIRFII*PNESRHVQLQRRTA
Trigger: CGCCGTTCGCCTCTGGAGCTGGACATGCCGACTTTCGTTAGGTCAAATAATGAACCTTATACTGCGGAAGTGCGGTATTAATATTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS TCA 90 bp TTGGGTTTCAAGGATCAAAGAACAGTTCTCACCTGCAGGGATGTTTaGCTCATCAGCCCTCTTCCTGTACCTGGAAAACAAGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: LGFKDQRTVLTCRDV*LISPLPVPGKQAGA
Trigger: AGCGCCTGCTTGTTTTCCAGGTACAGGAAGAGGGCTGATGAGTCAAACATCCCTGCAGGTGAGAACTGTTCTTTGATCCTTGAAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460704.1
CDS-3UTR CAA 90 bp CCCTCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCAGCAGGTCCCGTTCATTaGGTTTCACTAGGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: PSTEVCPLSIQHMMKYTAAGPVH*VSLGSN
Trigger: ATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGC...TGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp TCCACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATGCCATCCAGACAGCTaGTCCACCTTCACTCACAGC +
Preference number: 5 (lower is better)
Translates to: STEVCPLSIQHMMKYTALCHPDS*STFTHS
Trigger: GCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCA...TAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS GCA 90 bp AAAAAGTCTCTGGAGGAAGCAAAGAACTCCTGCACGTGGGCTCTCTaGTCTTCAGCCTTTGCTTTTAAAGATTTGGGAAGAAGGTTCACC +
Preference number: 5 (lower is better)
Translates to: KKSLEEAKNSCTWAL*SSAFAFKDLGRRFT
Trigger: GGTGAACCTTCTTCCCAAATCTTTAAAAGCAAAGGCTGAAGAGCAGAGAGCCCACGTGCAGGAGTTCTTTGCTTCCTCCAGAGACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000481477.5
CDS-3UTR CAA 90 bp ACCGCCAATCTGCCCCTTAACCCAATGGTATCAGAGCATCTTAAAAGCACAACCTCTCATTCACTCCTCTaGATTCAGAACTTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: TANLPLNPMVSEHLKSTTSHSLL*IQNFRR
Trigger: TCTGCGGAAGTTCTGAATCAAGAGGAGTGAATGAGA...GGTTGTGCTTTTAAGATGCTCTGATACCATTGGGTTAAGGGGCAGATTGGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000399215.5
CDS-3UTR CAA 90 bp ACAGAAGTCTGCCCACTCTCCATACAGCATATGATGAAATACACTGCATTATACCTCCTGCAGGGATGTTaGACTCATCAGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TEVCPLSIQHMMKYTALYLLQGC*THQPSS
Trigger: GGAAGAGGGCTGATGAGTCAAACATCCCTGCAGGAG...GTATAATGCAGTGTATTTCATCATATGCTGTATGGAGAGTGGGCAGACTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp TCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGTACACGGCTCTGGTGTaGACGGTGCACCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: SVLKGEKELTYLGPLIGKYTALV*TVHQAH
Trigger: GTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGTA...CTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATACAGCCATGCAAATGGTaGACATGCTGCCGATGGCCG +
Preference number: 5 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIQPCKW*TCCRWP
Trigger: CGGCCATCGGCAGCATGTCAACCATTTGCATGGCTG...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATACTCCTGCAGGGATGTTaGACTCATCAGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GLSVLKGEKELTYLGPLILLQGC*THQPSS
Trigger: GGAAGAGGGCTGATGAGTCAAACATCCCTGCAGGAG...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS TCA 90 bp CCTCTTCCTGTACCTGGAAAACAAGCAGGCGCTAAGTTTGAATCTTaGAACTTCCTAGCTTTCAGCCACTTCCTCAGCTCTATAAATTCA +
Preference number: 5 (lower is better)
Translates to: PLPVPGKQAGAKFES*NFLAFSHFLSSINS
Trigger: TGAATTTATAGAGCTGAGGAAGTGGCTGAAAGCTAGGAAGTTTCAAGATTCAAACTTAGCGCCTGCTTGTTTTCCAGGTACAGGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000442559.5
ENST00000443703.1
ENST00000446166.5
ENST00000460704.1
ENST00000481477.5
ENST00000485865.1
CDS-3UTR CAA 90 bp AAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGGGAAGAGGAAAAAGTGCCATCCAGACAGCTaGTCCACCTTCACTCACAGC +
Preference number: 5 (lower is better)
Translates to: KGEKELTYLGPLIGKRKKCHPDS*STFTHS
Trigger: GCTGTGAGTGAAGGTGGACAAGCTGTCTGGATGGCA...CTTTTTCCTCTTCCCTATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp GGGCTGTCCGTTTTGAAAGGTGAAAAGGAATTAACATATTTAGGTCCACTCATAGCAGGTCCCGTTCATTaGGTTTCACTAGGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: GLSVLKGEKELTYLGPLIAGPVH*VSLGSN
Trigger: ATTGGAGCCTAGTGAAACCAAATGAACGGGACCTGC...TATGAGTGGACCTAAATATGTTAATTCCTTTTCACCTTTCAAAACGGACAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
CDS-3UTR CAA 90 bp CCCATGATGATGCTCTTCAAAATTAACTTTTGTTTCAGAGGAGGTGACCAAATGAAGGAATTTGAGTTCTaGGGAAGAATGAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: PMMMLFKINFCFRGGDQMKEFEF*GRMNPG
Trigger: CCCAGGGTTCATTCTTCCCAAGAACTCAAATTCCTT...CATTTGGTCACCTCCTCTGAAACAAAAGTTAATTTTGAAGAGCATCATCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332131.9
CDS TCA 90 bp CAAATGAATACTTCGCGGACATCAATATTAAATTTATCAGGATTTTaGAAACATGAAGCCAATCTCGAAGCTGGTTTTCTAGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: QMNTSRTSILNLSGF*KHEANLEAGFLAAR
Trigger: TCTTGCTGCTAGAAAACCAGCTTCGAGATTGGCTTCATGTTTTCAAAATCCTGATAAATTTAATATTGATGTCCGCGAAGTATTCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487297.5
CDS GCA 72 bp ATGTCCAGCTCCAGAGGCGAACGGCGGCTGGTTCGGTaGGGGTCCCAGCGCTCAGTCCACAGACCGCGCCGG +
Preference number: 6 (lower is better)
Translates to: MSSSRGERRLVR*GSQRSVHRPRR
Trigger: CCGGCGCGGTCTGTGGACTGAGCGCTGGGACCCGCACCGAACCAGCCGCCGTTCGCCTCTGGAGCTGGACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399215.5
ENST00000443703.1
CDS TCA 72 bp CCCGCTGCCTGGGCCTCAGGTACACGGCTCTGGTGTTaGCGGTGCACCAAGCCCACAGCAGGGCACTGTAGC +
Preference number: 6 (lower is better)
Translates to: PAAWASGTRLWC*RCTKPTAGHCS
Trigger: GCTACAGTGCCCTGCTGTGGGCTTGGTGCACCGTCAACACCAGAGCCGTGTACCTGAGGCCCAGGCAGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000481477.5
CDS TCA 72 bp CGCGAGCTGTCCACCATCACCCTGCTGAGGACCACGTaGAGCCCGGTGACCGCCACAGACACAGGCACCGTC +
Preference number: 6 (lower is better)
Translates to: RELSTITLLRTT*SPVTATDTGTV
Trigger: GACGGTGCCTGTGTCTGTGGCGGTCACCGGGCTTCACGTGGTCCTCAGCAGGGTGATGGTGGACAGCTCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399215.5
ENST00000443703.1
CDS CCA 72 bp AGGCGCCGGCGGCCGCTTCCAAGATGGAGGCTGCAGTaGGCGGGCCCAAGGCACGTGGAAATACCAAACAGC +
Preference number: 6 (lower is better)
Translates to: RRRRPLPRWRLQ*AGPRHVEIPNS
Trigger: GCTGTTTGGTATTTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000446166.5
CDS CCA 72 bp AAGTCGGCATGTCCAGCTCCAGAGGCGAACGGCGGCTaGTTCGGTGCGGGTCCCAGCGCTCAGTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: KSACPAPEANGG*FGAGPSAQSTD
Trigger: GTCTGTGGACTGAGCGCTGGGACCCGCACCGAACCAGCCGCCGTTCGCCTCTGGAGCTGGACATGCCGACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399215.5
ENST00000443703.1
CDS GCA 72 bp GTTCTAGGCGCCGGCGGCCGCTTCCAAGATGGAGGCTaGAGTGGGCGGGCCCAAGGCACGTGGAAATACCAA +
Preference number: 6 (lower is better)
Translates to: VLGAGGRFQDGG*SGRAQGTWKYQ
Trigger: TTGGTATTTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCTAGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000446166.5
CDS CCA 72 bp AATGCTCAATCTAGGCGCCGGCGGCCGCTTCCAAGATaGAGGCTGCAGTGGGCGGGCCCAAGGCACGTGGAA +
Preference number: 6 (lower is better)
Translates to: NAQSRRRRPLPR*RLQWAGPRHVE
Trigger: TTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCTAGATTGAGCATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS GCA 72 bp GTCCAGGTACGGAGCGAGTGCACAGGTGTCCGGCTCTaGAGAAAGGCATTCCCGCTGCCTGGGCCTCAGGTA +
Preference number: 6 (lower is better)
Translates to: VQVRSECTGVRL*RKAFPLPGPQV
Trigger: TACCTGAGGCCCAGGCAGCGGGAATGCCTTTCTGCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS GCA 72 bp AATCTAGGCGCCGGCGGCCGCTTCCAAGATGGAGGCTaGAGTGGGCGGGCCCAAGGCACGTGGAAATACCAA +
Preference number: 6 (lower is better)
Translates to: NLGAGGRFQDGG*SGRAQGTWKYQ
Trigger: TTGGTATTTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCTAGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399212.5
CDS CCA 72 bp AAATACAGTTCTAGGCGCCGGCGGCCGCTTCCAAGATaGAGGCTGCAGTGGGCGGGCCCAAGGCACGTGGAA +
Preference number: 6 (lower is better)
Translates to: KYSSRRRRPLPR*RLQWAGPRHVE
Trigger: TTCCACGTGCCTTGGGCCCGCCCACTGCAGCCTCCATCTTGGAAGCGGCCGCCGGCGCCTAGAACTGTATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332131.9
ENST00000446166.5
CDS CCA 72 bp CAATCCCGCCGACTCTGCTCCCGTTACCCGGGCAACTaGAGGCCCGACCCGGAAGTCCTACTAGCTCACCTA +
Preference number: 6 (lower is better)
Translates to: QSRRLCSRYPGN*RPDPEVLLAHL
Trigger: TAGGTGAGCTAGTAGGACTTCCGGGTCGGGCCTCCAGTTGCCCGGGTAACGGGAGCAGAGTCGGCGGGATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399208.6
CDS CCA 72 bp CCCTCCTCGCTAACGGAATCCTACTTAGAGGGCACGTaGCTGGGGAAAGGCCAGCACGGATCTCCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: PSSLTESYLEGT*LGKGQHGSPPL
Trigger: CAAGGGAGGAGATCCGTGCTGGCCTTTCCCCAGCCACGTGCCCTCTAAGTAGGATTCCGTTAGCGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460704.1
CDS GCA 72 bp TGGGCTATGATTCAGCAGGTCCAGGTACGGAGCGAGTaGACAGGTGTCCGGCTCTGCAGAAAGGCATTCCCG +
Preference number: 6 (lower is better)
Translates to: WAMIQQVQVRSE*TGVRLCRKAFP
Trigger: CGGGAATGCCTTTCTGCAGAGCCGGACACCTGTGCACTCGCTCCGTACCTGGACCTGCTGAATCATAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS GCA 72 bp GCGCTAAGTGTAGGACTCCACAAGATGAGAGGTTACTaGAGCGCACACGATAATGCCTGCCCTGGAGGGGAC +
Preference number: 6 (lower is better)
Translates to: ALSVGLHKMRGY*SAHDNACPGGD
Trigger: GTCCCCTCCAGGGCAGGCATTATCGTGTGCGCTGCAGTAACCTCTCATCTTGTGGAGTCCTACACTTAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399207.5
ENST00000399215.5
ENST00000443703.1
CDS GCA 72 bp AAAACTGCAGAGGGAGAGGCTGAAGGCTGTCGCGCCTaGCTGGTGTCCTTAAGCAATCCAAGTCCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: KTAEGEAEGCRA*LVSLSNPSPQS
Trigger: AGACTGAGGACTTGGATTGCTTAAGGACACCAGGCAGGCGCGACAGCCTTCAGCCTCTCCCTCTGCAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000446166.5
CDS GCA 72 bp AGGCTCCTCAGCTTTACGCAGCGCGCCGGAGCAACATaGGCTAAGTGTAGGACTCCACAAGATGAGAGGTTA +
Preference number: 6 (lower is better)
Translates to: RLLSFTQRAGAT*AKCRTPQDERL
Trigger: TAACCTCTCATCTTGTGGAGTCCTACACTTAGCGCATGTTGCTCCGGCGCGCTGCGTAAAGCTGAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399207.5
ENST00000399215.5
ENST00000443703.1
CDS GCA 72 bp AAGATGAGAGGTTACTGCAGCGCACACGATAATGCCTaGCCTGGAGGGGACCTGCGACCTAAACTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: KMRGYCSAHDNA*PGGDLRPKLSS
Trigger: AGAACTGAGTTTAGGTCGCAGGTCCCCTCCAGGGCAGGCATTATCGTGTGCGCTGCAGTAACCTCTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS TCA 72 bp GGCCCAAGGCACGTGGAAATACCAAACAGCCCCAGATaGAGGCAAGTTAAAGGAACCGGCCAAAACTGCAGA +
Preference number: 6 (lower is better)
Translates to: GPRHVEIPNSPR*RQVKGTGQNCR
Trigger: TCTGCAGTTTTGGCCGGTTCCTTTAACTTGCCTTCATCTGGGGCTGTTTGGTATTTCCACGTGCCTTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000446166.5
CDS TCA 72 bp TCATTAAACGCTGCTTTTACCTGGACATGTGGGCTATaGTTCAGCAGGTCCAGGTACGGAGCGAGTGCACAG +
Preference number: 6 (lower is better)
Translates to: SLNAAFTWTCGL*FSRSRYGASAQ
Trigger: CTGTGCACTCGCTCCGTACCTGGACCTGCTGAATCATAGCCCACATGTCCAGGTAAAAGCAGCGTTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS TCA 72 bp CTGTTTGCAAACTGTGCAGGGTCTCGGCAGATGCCCTaGGAATCTTTAGCTCTTCCGTCCACAAGGATTCCA +
Preference number: 6 (lower is better)
Translates to: LFANCAGSRQMP*ESLALPSTRIP
Trigger: TGGAATCCTTGTGGACGGAAGAGCTAAAGATTCTCAGGGCATCTGCCGAGACCCTGCACAGTTTGCAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332131.9
ENST00000399212.5
ENST00000399215.5
ENST00000469482.1
ENST00000481477.5
ENST00000487297.5
CDS CCA 72 bp CTTCCGGCTCCAAACAAACAGGGCAGGTATACGCCTTaGGTAAAATCTCCAGGTAAGGCTTCCAAAGAGATC +
Preference number: 6 (lower is better)
Translates to: LPAPNKQGRYTP*VKSPGKASKEI
Trigger: GATCTCTTTGGAAGCCTTACCTGGAGATTTTACCCAAGGCGTATACCTGCCCTGTTTGTTTGGAGCCGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000446166.5
ENST00000481477.5
ENST00000485865.1
CDS CAA 90 bp ATTGGGTTTCAAGGATCAAAGAACAGTTCTCACCTGCAGGGATGTTaGACTCATCAGCCCTCTTCCTGTACCTGGAAAACAAGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: IGFQGSKNSSHLQGC*THQPSSCTWKTSRR
Trigger: GCGCCTGCTTGTTTTCCAGGTACAGGAAGAGGGCTGATGAGTCAAACATCCCTGCAGGTGAGAACTGTTCTTTGATCCTTGAAACCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460704.1
CDS TCA 72 bp GGAACAGCCGTTGATTATCGTGAGGGCCGTAACAGATaGATACCTCTTCATGCTTTCTCCAACGTGAAGTCG +
Preference number: 6 (lower is better)
Translates to: GTAVDYREGRNR*IPLHAFSNVKS
Trigger: CGACTTCACGTTGGAGAAAGCATGAAGAGGTATTCATCTGTTACGGCCCTCACGATAATCAACGGCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS TCA 72 bp CTCTTGATTCAGAACTTCCGCAGAGTTTTCGTCTTCTaGTCCGGCTTGTTCTCCCTTTTCCTTTCTGCATGC +
Preference number: 6 (lower is better)
Translates to: LLIQNFRRVFVF*SGLFSLFLSAC
Trigger: GCATGCAGAAAGGAAAAGGGAGAACAAGCCGGATCAGAAGACGAAAACTCTGCGGAAGTTCTGAATCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000442559.5
ENST00000443703.1
ENST00000446166.5
ENST00000481477.5
CDS TCA 72 bp GTACCTGGAAAACAAGCAGGCGCTAAGTTTGAATCTTaGAACTTCCTAGCTTTCAGCCACTTCCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: VPGKQAGAKFES*NFLAFSHFLSS
Trigger: AGAGCTGAGGAAGTGGCTGAAAGCTAGGAAGTTTCAAGATTCAAACTTAGCGCCTGCTTGTTTTCCAGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000424303.5
ENST00000429161.5
ENST00000442559.5
ENST00000443703.1
ENST00000446166.5
ENST00000460704.1
ENST00000481477.5
ENST00000485865.1
CDS TCA 72 bp TTAATACCGCACTTCCGCAGTATAAGGTTCATTATTTaGCCTAACGAAAGTCGGCATGTCCAGCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LIPHFRSIRFII*PNESRHVQLQR
Trigger: CCTCTGGAGCTGGACATGCCGACTTTCGTTAGGTCAAATAATGAACCTTATACTGCGGAAGTGCGGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399215.5
CDS CAA 72 bp ATGGACAGAAACAAATCCGTATTCCAGGAACAGCCGTaGATTATCGTGAGGGCCGTAACAGATGAATACCTC +
Preference number: 6 (lower is better)
Translates to: MDRNKSVFQEQP*IIVRAVTDEYL
Trigger: GAGGTATTCATCTGTTACGGCCCTCACGATAATCAACGGCTGTTCCTGGAATACGGATTTGTTTCTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS CAA 90 bp AACTTCCTAGCTTTCAGCCACTTCCTCAGCTCTATAAATTCAGACTaGTGGCTCTCATTCATTCTGTATTCCCAGCATTTGGGAGGCCAA +
Preference number: 6 (lower is better)
Translates to: NFLAFSHFLSSINSD*WLSFILYSQHLGGQ
Trigger: TTGGCCTCCCAAATGCTGGGAATACAGAATGAATGAGAGCCACAAGTCTGAATTTATAGAGCTGAGGAAGTGGCTGAAAGCTAGGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399201.5
ENST00000399205.5
ENST00000399212.5
ENST00000442559.5
ENST00000446166.5
CDS CAA 90 bp ATGAGGATTATGGACAGAAACAAATCCGTATTCCAGGAACAGCCGTaGATTATCGTGAGGGCCGTAACAGATGAATACCTCTTCATGCTT +
Preference number: 6 (lower is better)
Translates to: MRIMDRNKSVFQEQP*IIVRAVTDEYLFML
Trigger: AAGCATGAAGAGGTATTCATCTGTTACGGCCCTCACGATAATCAACGGCTGTTCCTGGAATACGGATTTGTTTCTGTCCATAATCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332131.9
ENST00000399201.5
ENST00000399205.5
ENST00000399207.5
ENST00000399208.6
ENST00000399212.5
ENST00000399215.5
ENST00000481477.5
CDS CCA 72 bp TTCAGCCACTTCCTCAGCTCTATAAATTCAGACTTGTaGCTCTCATTCACTATCAGGCAAGGAGAGAACAAA +
Preference number: 6 (lower is better)
Translates to: FSHFLSSINSDL*LSFTIRQGENK
Trigger: TTTGTTCTCTCCTTGCCTGATAGTGAATGAGAGCCACAAGTCTGAATTTATAGAGCTGAGGAAGTGGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485865.1
CDS TCA 72 bp AAAACAAGCAGGTCATTAGGACATCAGCATGACTGTTaGAAATTTACAGTCAACAAAAGTAGAGGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: KTSRSLGHQHDC*KFTVNKSRGPA
Trigger: TGCAGGGCCTCTACTTTTGTTGACTGTAAATTTTCAACAGTCATGCTGATGTCCTAATGACCTGCTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487297.5