RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000181555

Ensembl transcript IDs: ENST00000330022.11, ENST00000409792.4, ENST00000412450.1, ENST00000431180.5, ENST00000445387.5, ENST00000479832.1, ENST00000638947.1

Found 1238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCTGAACTGGGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTaGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGG +
Preference number: 1 (lower is better)
Translates to: VPELGRGPALARQQR*SLGVLHHHSGPHTG
Trigger: CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCCCAGTTCAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp ACTGGGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTaGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAA +
Preference number: 1 (lower is better)
Translates to: TGPGAGTGKTATLES*CTTPSLWATYWELE
Trigger: TTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR GCA 90 bp TGGCTGCAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTaGTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAA +
Preference number: 1 (lower is better)
Translates to: WLQGLRLPWCNYCSH*CGWLYHHSLWMSCE
Trigger: TTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp GGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTG +
Preference number: 1 (lower is better)
Translates to: GNFHRSCHMWHHWYW*RGRKGFCRMSHQGL
Trigger: CAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR GCA 90 bp TGTCACAACCATTTCAGATGGCTGCAAGGGCTGAGGCTGCCCTGGTaGAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCC +
Preference number: 1 (lower is better)
Translates to: CHNHFRWLQGLRLPW*NYCSHCCGWLYHHS
Trigger: GGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp ACTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTaGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGG +
Preference number: 1 (lower is better)
Translates to: TGNFHRSCHMWHHWY*WRGRKGFCRMSHQG
Trigger: CCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp CTGGGAACTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTaGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCAC +
Preference number: 1 (lower is better)
Translates to: LGTGNFHRSCHMWHH*YWWRGRKGFCRMSH
Trigger: GTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp CCAAACACTATAATTCTGTCCCTGAACTGGGCCGGGGGCCGGCACTaGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACT +
Preference number: 1 (lower is better)
Translates to: PNTIILSLNWAGGRH*QDSNAGVLVYYTIT
Trigger: AGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCCCAGTTCAGGGACAGAATTATAGTGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp GGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTaGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTG +
Preference number: 1 (lower is better)
Translates to: GLRLPWCNYCSHCCG*LYHHSLWMSCENLL
Trigger: CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp ATTTGTCACAACCATTTCAGATGGCTGCAAGGGCTGAGGCTGCCCTaGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCAC +
Preference number: 1 (lower is better)
Translates to: ICHNHFRWLQGLRLP*CNYCSHCCGWLYHH
Trigger: GTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp TCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGAT +
Preference number: 1 (lower is better)
Translates to: SQVHLSFMLKAGIIS*AFPSRRIPLSLPCD
Trigger: ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 90 bp CCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTCAGGCAGGACTGTGAGTGTGTGTTC +
Preference number: 1 (lower is better)
Translates to: PSPSSAIQIHNKDSP*RSRKDFRQDCECVF
Trigger: GAACACACACTCACAGTCCTGCCTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 90 bp TCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTaGAAATCTGTTGCCCCTGGATATACTGAAGACTTGGCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: SLLRLAVPPLLVDEL*KSVAPGYTEDLAGH
Trigger: ATGCCCAGCCAAGTCTTCAGTATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 90 bp CTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTTaGATCCCAAACACTATAATTCTGTCCCTGAACTGGGCCGGGGGC +
Preference number: 1 (lower is better)
Translates to: LCRRVLLLYTDRLLV*IPNTIILSLNWAGG
Trigger: GCCCCCGGCCCAGTTCAGGGACAGAATTATAGTGTTTGGGATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp AGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATGGGATAACCTaGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAG +
Preference number: 1 (lower is better)
Translates to: SIRVAGIHIGLHGIT*WVTSKGMMRGIITK
Trigger: CTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 90 bp GGGTCTCTCTCTCTTGACCTATTAGGAGTCTTCGGGGCAGGTGTTTaGTCTCTGAAGCCAACAGCATCCCTTCCTCGTTCAGTTGTTGTG +
Preference number: 1 (lower is better)
Translates to: GSLSLDLLGVFGAGV*SLKPTASLPRSVVV
Trigger: CACAACAACTGAACGAGGAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 90 bp GGGTCTCTCTCTCTTGACCTATTAGGAGTCTTCGGGGCAGGTGTTTaGTCTCTGAAGCCAACAGCATCCCTTCCTCGTTCAGTTGCAACA +
Preference number: 1 (lower is better)
Translates to: GSLSLDLLGVFGAGV*SLKPTASLPRSVAT
Trigger: TGTTGCAACTGAACGAGGAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445387.5
3UTR GCA 90 bp GGGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATaGTCAAGGCTGGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGA +
Preference number: 1 (lower is better)
Translates to: GFSSYVGVPRSISAS*SRLASSPGLSQVGG
Trigger: TCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp ATTAGGGTTGCTGGGATCCACATAGGCCTGCATGGGATAACCTGGTaGGTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGA +
Preference number: 1 (lower is better)
Translates to: IRVAGIHIGLHGITW*VTSKGMMRGIITKR
Trigger: TCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATCCCAGCAACCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp GTCAGCTTCTGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTaGTGTATGAGCACGCGATGTATTCTCACTAGAATACCCATCTCC +
Preference number: 1 (lower is better)
Translates to: VSFCAQLGGRIRCVE*CMSTRCILTRIPIS
Trigger: GGAGATGGGTATTCTAGTGAGAATACATCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACAGAAGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 90 bp TCTGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCACTAGAATACCCATCTCCTTCACTC +
Preference number: 1 (lower is better)
Translates to: SVLSLVEGSGVLSGV*ARDVFSLEYPSPSL
Trigger: GAGTGAAGGAGATGGGTATTCTAGTGAGAATACATCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 90 bp AACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTaGATGAGCTGTGAAAATCTGTTGCCCCTGGATATACTGAAGACT +
Preference number: 1 (lower is better)
Translates to: NYCSHCCGWLYHHSL*MSCENLLPLDILKT
Trigger: AGTCTTCAGTATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp ACATATACATTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTaGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAG +
Preference number: 1 (lower is better)
Translates to: TYTLKYNTDHQGKGL*VGMRMGLCADSTAK
Trigger: CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAATGTATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR TCA 90 bp ACGCTAGGTTCTCGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTaGGAAAAGGAGACACATGGTCAGCTGGTGATGTTAACAAGCTCC +
Preference number: 1 (lower is better)
Translates to: TLGSRFSSARSWKWS*EKETHGQLVMLTSS
Trigger: GGAGCTTGTTAACATCACCAGCTGACCATGTGTCTCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACGAGAACCTAGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431180.5
3UTR GCA 90 bp CTACAGGGACATTTTCTAATTGATCAAGATCCTCTTTGCCATCCTTaGCTTCTAGCTCACTGGTTGCATCAGAGATTGCACTGTCCATGC +
Preference number: 1 (lower is better)
Translates to: LQGHFLIDQDPLCHP*LLAHWLHQRLHCPC
Trigger: GCATGGACAGTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR GCA 90 bp CCTCTTCCTCTACAGGGACATTTTCTAATTGATCAAGATCCTCTTTaGCATCCTTGCCTTCTAGCTCACTGGTTGCATCAGAGATTGCAC +
Preference number: 1 (lower is better)
Translates to: PLPLQGHFLIDQDPL*HPCLLAHWLHQRLH
Trigger: GTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCCTGTAGAGGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR GCA 90 bp CACACCATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTaGTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGA +
Preference number: 1 (lower is better)
Translates to: HTIDCWTCLSLIIYG*LRLCRRVLLLYTDR
Trigger: TCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATGGTGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 90 bp TGGCTCCTTTCACTCTCCACATCAGACACACCCTCCTCTTCATCTTaGGATGGTGTTTCTTCATTAATAGGTTCTTCTAGTTTTGTGCCG +
Preference number: 1 (lower is better)
Translates to: WLLSLSTSDTPSSSS*DGVSSLIGSSSFVP
Trigger: CGGCACAAAACTAGAAGAACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGTGGAGAGTGAAAGGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR GCA 90 bp GACTGTGAGTGTGTGTTCTGTATGAGTTCCAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTAACCATTAGCCGGGATAAGCTGAGC +
Preference number: 1 (lower is better)
Translates to: DCECVFCMSSRQVSF*SKVSILTISRDKLS
Trigger: GCTCAGCTTATCCCGGCTAATGGTTAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCTGGAACTCATACAGAACACACACTCACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 90 bp CAACGGAGGGACAGCAGTCTTAGTCTGAGACCAGCGTTGAATAATTaGAAGTACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGG +
Preference number: 1 (lower is better)
Translates to: QRRDSSLSLRPALNN*KYFAFLQHIFSRNG
Trigger: CCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGGTCTCAGACTAAGACTGCTGTCCCTCCGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 90 bp CTTTCTCGTGTTATTCTTGTGATGGTGATTAAGTCACACAAGATCTaGTGGGTTTATCAAGGGTTTTCACTTTTGCTTCTTCCTCTTTTT +
Preference number: 1 (lower is better)
Translates to: LSRVILVMVIKSHKI*WVYQGFSLLLLPLF
Trigger: AAAAAGAGGAAGAAGCAAAAGTGAAAACCCTTGATAAACCCATCAGATCTTGTGTGACTTAATCACCATCACAAGAATAACACGAGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR TCA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGCTTCAGGCAGGACTGTaGGTGTGTGTTCTGTATGAG +
Preference number: 2 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLLQAGL*VCVLYE
Trigger: CTCATACAGAACACACACTCACAGTCCTGCCTGAAG...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR GCA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACCCACCATGTAAGAAGTaGCTTTTGCCTCCTGCCGCA +
Preference number: 2 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDPPCKK*LLPPAA
Trigger: TGCGGCAGGAGGCAAAAGGCACTTCTTACATGGTGG...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTC +
Preference number: 2 (lower is better)
Translates to: ATLESWCTTPSLWATYWEHHWYW*RGRKGF
Trigger: GAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTG...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR TCA 90 bp TGGTTTGGCTGTTTCCCCACCCAAACTCAACTTGAGGAGGTAACTGAATCATGGCTCCTGCCGCAATTCTaGGGCCTCCCCAGCCATGTG +
Preference number: 2 (lower is better)
Translates to: WFGCFPTQTQLEEVTESWLLPQF*GLPSHV
Trigger: CACATGGCTGGGGAGGCCTCAGAATTGCGGCAGGAG...CCATGATTCAGTTACCTCCTCAAGTTGAGTTTGGGTGGGGAAACAGCCAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR TCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGGGCAGAAGAGGGTGGTaGGAGGGAGCTTCTTCGTTT +
Preference number: 2 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLGRRGW*EGASSF
Trigger: AAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCC...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCGGTAACCCCGGCAATTaGCTGATCCGCAGAAACATT +
Preference number: 2 (lower is better)
Translates to: PRSISASCSRLASSPGLSGNPGN*LIRRNI
Trigger: AATGTTTCTGCGGATCAGCCAATTGCCGGGGTTACC...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACAACTGTCCAGGAGTTTaGTGGCCAAATCACTTATAT +
Preference number: 2 (lower is better)
Translates to: GRGPALARQQRWSLGVLHNCPGV*WPNHLY
Trigger: ATATAAGTGATTTGGCCACCAAACTCCTGGACAGTT...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATGGTCCATGCTGGGTGTaGGCAGGAGCACCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHGPCWV*AGAPFQ
Trigger: CTGGAAAGGTGCTCCTGCCCACACCCAGCATGGACC...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR TCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTCAGGTGTTTGATCTCTaGAGCCAACAGCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCQVFDL*SQQHPF
Trigger: GAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTG...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCTTCTGTGCTCAGCTTaGTGGAAGGATCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSLLCSA*WKDQVC
Trigger: ACACACCTGATCCTTCCACCAAGCTGAGCACAGAAG...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAAGCAGGAGAACACACTaGGTCCATGCTGGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SYVGVPRSISASCSRLASSRRTH*VHAGCG
Trigger: CCCACACCCAGCATGGACCCAGTGTGTTCTCCTGCT...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 90 bp CTTCTTCCTCTTTTTCTCTTGCCACCACCATGTAAGAAGTGCCTTTaGCCTCCTGCCGCAATTCTGAGGCCTCCCCAGCCATGTGGAACT +
Preference number: 2 (lower is better)
Translates to: LLPLFLLPPPCKKCL*PPAAILRPPQPCGT
Trigger: AGTTCCACATGGCTGGGGAGGCCTCAGAATTGCGGCAGGAGGCAAAAGGCACTTCTTACATGGTGGTGGCAAGAGAAAAAGAGGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR TCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCNKDSP*RSRKDF
Trigger: GAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTT...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR GCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAAACTTCCACAGGAGCTaGCACATGTGGCACCACTGG +
Preference number: 2 (lower is better)
Translates to: SYVGVPRSISASCSRLASNFHRS*HMWHHW
Trigger: CCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTT...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGACAATAATCCCCATTTaGACACCGAGAAGAACATTC +
Preference number: 2 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLTIIPI*TPRRTF
Trigger: GAATGTTCTTCTCGGTGTCCAAATGGGGATTATTGT...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGGGTAACCCCGGCAATTaGCTGATCCGCAGAAACATT +
Preference number: 2 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLGNPGN*LIRRNI
Trigger: AATGTTTCTGCGGATCAGCCAATTGCCGGGGTTACC...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTCTTCTGTGCTCAGCTTaGTGGAAGGATCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCLLCSA*WKDQVC
Trigger: ACACACCTGATCCTTCCACCAAGCTGAGCACAGAAG...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 90 bp GGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTaGCCCCTGGATATACTGAAGACTTGGCTGGGCATAACTCTGTAC +
Preference number: 2 (lower is better)
Translates to: GWLYHHSLWMSCENL*PLDILKTWLGITLY
Trigger: GTACAGAGTTATGCCCAGCCAAGTCTTCAGTATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGCTTCATTTTCCCTCCTaGTGCTCTGATGCTGACTCT +
Preference number: 2 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKLHFPS*CSDADS
Trigger: AGAGTCAGCATCAGAGCAGCAGGAGGGAAAATGAAG...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATTGCCGTTGCTCTCTTTaGGCTCTATTTCAGCGTCAG +
Preference number: 2 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDCRCSL*ALFQRQ
Trigger: CTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCA...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 90 bp CTGCATCTGTTGCTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCG +
Preference number: 2 (lower is better)
Translates to: LHLLLLFLSLPLSHL*LKQLPAFLCRKFIA
Trigger: CGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAGCAACAGATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 90 bp TGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTaGTGGATGAGCTGTGAAAATCTGTTGCCCCTGGATATACTGAAG +
Preference number: 2 (lower is better)
Translates to: CNYCSHCCGWLYHHS*WMSCENLLPLDILK
Trigger: CTTCAGTATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR TCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGACCCCGGCAATTGGCTaGTCCGCAGAAACATTTCTG +
Preference number: 2 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLTPAIG*SAETFL
Trigger: CAGAAATGTTTCTGCGGATCAGCCAATTGCCGGGGT...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGGACATTTTCTAATTaGTCAAGATCCTCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSGTFSN*SRSSLP
Trigger: TGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATTGGGTCTCTCTCTCTTaGCCTATTAGGAGTCTTCGG +
Preference number: 2 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHWVSLS*PIRSLR
Trigger: CCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCA...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR TCA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGGTAGGAGGATCCCACTaGGTCTGCCTTGTGATCACA +
Preference number: 2 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQVGGSH*VCLVIT
Trigger: TGTGATCACAAGGCAGACTCAGTGGGATCCTCCTAC...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGCTAGTTTTGTGCCGTTaGTCTCTTTGGGCTCTATTT +
Preference number: 2 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPALVLCR*SLWALF
Trigger: AAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAG...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCCGCAGAAACATTTCTaGGCTTCTTTTCCATATCTC +
Preference number: 2 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSPQKHF*ASFPYL
Trigger: GAGATATGGAAAAGAAGCCCAGAAATGTTTCTGCGG...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAATTTGGTTCACAGCTGTaGTTCATGAAACGAGAGCAA +
Preference number: 2 (lower is better)
Translates to: ATLESWCTTPSLWATYWEFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCACAGCTGTGAACCAAA...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCGGGACATTTTCTAATTaGTCAAGATCCTCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: TGKTATLESWCTTPSLWAGTFSN*SRSSLP
Trigger: TGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCC...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGTCATAGGGCAGTGGTaGTGTCATTCCCAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: VFIICWSSQVHLSFMLKAVIGQW*CHSQVL
Trigger: CAGAACCTGGGAATGACATCACCACTGCCCTATGAC...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGAGGTGTACACTCACACTaGATTCGCTTAATATCTCGA +
Preference number: 2 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRGVHSH*IRLISR
Trigger: TCGAGATATTAAGCGAATGCAGTGTGAGTGTACACC...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR GCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTACTGAGGCTGCCCTGGTaGAACTATTGTAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALLRLPW*NYCSHC
Trigger: GCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAG...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR GCA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGTTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 2 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQFTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAA...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATGCCTTCTAGCTCACTaGTTGCATCAGAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: SYVGVPRSISASCSRLASCLLAH*LHQRLH
Trigger: GTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCA...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAACTACACCATCACTCTaGGCCACATACTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQATTPSL*ATYWEL
Trigger: CAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGT...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAGCAACGCTGGAGTCTTaGTGTACTACACCATCACTC +
Preference number: 2 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQAATLES*CTTPSL
Trigger: GAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 90 bp TTCACATATACATTAAAATATAATACAGATCATCAGGGTAAAGGGTaGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCC +
Preference number: 2 (lower is better)
Translates to: FTYTLKYNTDHQGKG*WVGMRMGLCADSTA
Trigger: GGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAATGTATATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR TCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTGGGTCTCTCTCTCTTaGCCTATTAGGAGTCTTCGG +
Preference number: 2 (lower is better)
Translates to: INLINIAQGWPKPQGSLLWVSLS*PIRSLR
Trigger: CCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCA...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: VFIICWSSQVHLSFMLKANKDSP*RSRKDF
Trigger: GAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTT...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATAAGGATCAGGTGTGTTaGGTGGTGTATGAGCACGCG +
Preference number: 2 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDKDQVC*VVYEHA
Trigger: CGCGTGCTCATACACCACTCAACACACCTGATCCTT...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGACTGCTGCTGTACACTaGCAGACTGTTGGTTTGAAT +
Preference number: 2 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLTAAVH*QTVGLN
Trigger: ATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGT...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCATTTTCCCTCCTGCTaGTCTGATGCTGACTCTGTT +
Preference number: 2 (lower is better)
Translates to: INLINIAQGWPKPQGSLLHFPSC*SDADSV
Trigger: AACAGAGTCAGCATCAGAGCAGCAGGAGGGAAAATG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR GCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTAGTAGCTGTTGTGACTaGAATTCTTCCTCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: RFPVRVQALDDELGHLFSSSCCD*NSSSSS
Trigger: AGAGGAAGAGGAAGAATTGCAGTCACAACAGCTACT...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR GCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGTCATTCCCAGGTTCTaGATCTGTTGCTGTTGTTTC +
Preference number: 2 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLVIPRF*ICCCCF
Trigger: GAAACAACAGCAACAGATGCAGAACCTGGGAATGAC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp ACATCAGACACACCCTCCTCTTCATCTTGGGATGGTGTTTCTTCATTAATAGGTATGAAGGAAGGTCTTTaGCAGCTCTCAAGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: TSDTPSSSSWDGVSSLIGMKEGL*QLSSPS
Trigger: GCTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCAT...ACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGATATACTGAAGACTTaGCTGGGCATAACTCTGTAC +
Preference number: 2 (lower is better)
Translates to: RFPVRVQALDDELGHLFSDILKT*LGITLY
Trigger: GTACAGAGTTATGCCCAGCCAAGTCTTCAGTATATC...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGTACCACCACTCCTTGTaGATGAGCTGTGAAAATCTG +
Preference number: 2 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLYHHSL*MSCENL
Trigger: CAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTA...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAATAAATCTTCCCTTCTaGATCTCGAGCTGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: SYVGVPRSISASCSRLASINLPF*ISSCLP
Trigger: TGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTAT...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 90 bp ACCATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTaGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTG +
Preference number: 2 (lower is better)
Translates to: TIDCWTCLSLIIYGC*RLCRRVLLLYTDRL
Trigger: CAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAAAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTA +
Preference number: 2 (lower is better)
Translates to: ATLESWCTTPSLWATYWERQVSF*SKVSIL
Trigger: TAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCT...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTTCTTCTTTCTGATATaGTTTGGCTGTTTCCCCACC +
Preference number: 2 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGFFFLI*FGCFPT
Trigger: GGTGGGGAAACAGCCAAACCATATCAGAAAGAAGAA...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAAGAAAAGGAGACACATaGTCAGCTGGTGATGTTAAC +
Preference number: 2 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQARKGDT*SAGDVN
Trigger: GTTAACATCACCAGCTGACCATGTGTCTCCTTTTCT...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431180.5
3UTR-3UTR TCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAGAGCAATTTCCTTTTTaGGTGGCATCTATTATGAAG +
Preference number: 2 (lower is better)
Translates to: SYVGVPRSISASCSRLASEQFPF*VASIMK
Trigger: CTTCATAATAGATGCCACTCAAAAAGGAAATTGCTC...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR GCA 90 bp TCAGTCTGCGAAACATTAGTTTCTTGGGAGTGTCTGTGTCAGCTTCTGTGCTCAACAATCTTCCCCACATaGTATTTCACCTTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SVCETLVSWECLCQLLCSTIFPT*YFTLSS
Trigger: AGAGCTCAAGGTGAAATAGCATGTGGGGAAGATTGT...TGAGCACAGAAGCTGACACAGACACTCCCAAGAAACTAATGTTTCGCAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR GCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGCCTTCCTCGTTCAGTTaGAACAGTTCATATTCTGAC +
Preference number: 2 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQPSSFS*NSSYSD
Trigger: GTCAGAATATGAACTGTTGCAACTGAACGAGGAAGG...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445387.5
3UTR CAA 90 bp GATGTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTaGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAAT +
Preference number: 2 (lower is better)
Translates to: DVGSLLASMLVSLST*HSGSCCGSSCCDCN
Trigger: ATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 90 bp TGGGATGGTGTTTCTTCATTAATAGGTTCTTCTAGTTTTGTGCCGTaGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTTCTGGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: WDGVSSLIGSSSFVP*LSLGSISASASGSD
Trigger: ATCTGAACCAGAAGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACCTATTAATGAAGAAACACCATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCCATGCTATTTCACCTTaGGCTCTTTCATCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVHAISP*ALSSLE
Trigger: TTCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATG...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR TCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTTAGCCGGGATAAGCTaGGCACCTGGTTTTTATCAG +
Preference number: 2 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFLAGIS*APGFYQ
Trigger: CTGATAAAAACCAGGTGCTCAGCTTATCCCGGCTAA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCA +
Preference number: 2 (lower is better)
Translates to: SLLASMLVSLSTLHSGSCVLSGV*ARDVFS
Trigger: TGAGAATACATCGCGTGCTCATACACCACTCAACAC...ACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR TCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGACAGACTGTTGGTTTaGATCCCAAACACTATAATT +
Preference number: 2 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLDRLLV*IPNTII
Trigger: AATTATAGTGTTTGGGATTCAAACCAACAGTCTGTC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAACAGCCCCAAACTTCTaGATGTACTTCTTAATGTAC +
Preference number: 2 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALTAPNF*MYFLMY
Trigger: GTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 90 bp TCCTTCACTCAACGGAGGGACAGCAGTCTTAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTTGCTTTCCTCCAACATATTTTTAGT +
Preference number: 2 (lower is better)
Translates to: SFTQRRDSSLSLRPA*NNWKYFAFLQHIFS
Trigger: ACTAAAAATATGTTGGAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGGTCTCAGACTAAGACTGCTGTCCCTCCGTTGAGTGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 90 bp TTGGTGGAGTTGTCTGTGAATAAGGTGATGTCACACCATAGACTGTaGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTG +
Preference number: 2 (lower is better)
Translates to: LVELSVNKVMSHHRL*DMSVLDNIWLLETV
Trigger: CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGACAACTCCACCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTA +
Preference number: 2 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLRQVSF*SKVSIL
Trigger: TAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCT...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTTCACAGTCCATTTTTaGGTTTCACAATTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGFTVHF*VSQFGS
Trigger: TGAACCAAATTGTGAAACCCAAAAATGGACTGTGAA...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTGATAAGCTGAGCACCTaGTTTTTATCAGAGAGACCC +
Preference number: 2 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFDKLST*FLSERP
Trigger: GGGTCTCTCTGATAAAAACCAGGTGCTCAGCTTATC...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 90 bp ATGCTATTTTCACTTATAATTTTCAGTCTGCGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCTTCTGTGCTCAGCTTGGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: MLFSLIIFSLRNISF*GVSVSASVLSLVEG
Trigger: TCCTTCCACCAAGCTGAGCACAGAAGCTGACACAGACACTCCCAAGAAACTAATGTTTCGCAGACTGAAAATTATAAGTGAAAATAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR GCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACTTCCTCTTTTTCTCTTaGCACCACCATGTAAGAAGT +
Preference number: 2 (lower is better)
Translates to: IALQVLRILTVLQLLIHNFLFFS*HHHVRS
Trigger: ACTTCTTACATGGTGGTGGCAAGAGAAAAAGAGGAA...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CCA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATTGGGTTTCACAATTTaGTTCACAGCTGTGATTCAT +
Preference number: 2 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQLGFTI*FTAVIH
Trigger: ATGAATCACAGCTGTGAACCAAATTGTGAAACCCAA...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 90 bp ATGTACTTCTTAATGTACTCCTTGGTTTTGTGTTTCACATTCTCATaGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTA +
Preference number: 2 (lower is better)
Translates to: MYFLMYSLVLCFTFS*HSRSSGFLQYFSSL
Trigger: TAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCAAGGAGTACATTAAGAAGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR GCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTGGTTGCATCAGAGATTaGACTGTCCATGCTATTTTC +
Preference number: 2 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLGCIRD*TVHAIF
Trigger: GAAAATAGCATGGACAGTGCAATCTCTGATGCAACC...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTCCGCAGAAACATTTCTaGGCTTCTTTTCCATATCTC +
Preference number: 2 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLPQKHF*ASFPYL
Trigger: GAGATATGGAAAAGAAGCCCAGAAATGTTTCTGCGG...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTCCAGCGTTGAATAATTaGAAGTACTTTGCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLPALNN*KYFAFL
Trigger: GAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGG...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 72 bp CTGGGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTaGAGTCTTGGTGTACTACACCATCACTCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: LGRGPALARQQR*SLGVLHHHSGP
Trigger: TGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR GCA 72 bp GGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTaGGCTGACAGCACCGCCAAGGAGAAGACCCAGGTT +
Preference number: 3 (lower is better)
Translates to: GKGLWVGMRMGL*ADSTAKEKTQV
Trigger: AACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp AGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTaGCAGCACCGCCAAGGAGAAGACCCAGGTTTAAGA +
Preference number: 3 (lower is better)
Translates to: RVVGGDAHGSVR*QHRQGEDPGLR
Trigger: TCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR GCA 72 bp GGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTaGTGCGGCTGGCTGTACCACCACTCCTTGTGGATG +
Preference number: 3 (lower is better)
Translates to: GLRLPWCNYCSH*CGWLYHHSLWM
Trigger: CATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp GGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTaGTGTACTACACCATCACTCTGGGCCACATACTGG +
Preference number: 3 (lower is better)
Translates to: GAGTGKTATLES*CTTPSLWATYW
Trigger: CCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACTTTATCTGGCTGTTCTaGGCTCCTTTCACTCTCCAC +
Preference number: 3 (lower is better)
Translates to: GRGPALARQQRWSLGVLHFIWLF*APFTLH
Trigger: GTGGAGAGTGAAAGGAGCCAAGAACAGCCAGATAAA...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 72 bp CACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCAC +
Preference number: 3 (lower is better)
Translates to: HRSCHMWHHWYW*RGRKGFCRMSH
Trigger: GTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp ATAATTCTGTCCCTGAACTGGGCCGGGGGCCGGCACTaGCAAGACAGCAACGCTGGAGTCTTGGTGTACTAC +
Preference number: 3 (lower is better)
Translates to: IILSLNWAGGRH*QDSNAGVLVYY
Trigger: GTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCCCAGTTCAGGGACAGAATTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp TTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTaGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCC +
Preference number: 3 (lower is better)
Translates to: FHRSCHMWHHWY*WRGRKGFCRMS
Trigger: GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp GGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTaGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: GNFHRSCHMWHH*YWWRGRKGFCR
Trigger: TCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp GTTGCTGGGATCCACATAGGCCTGCATGGGATAACCTaGTGGGTAACCAGCAAAGGGATGATGCGGGGCATT +
Preference number: 3 (lower is better)
Translates to: VAGIHIGLHGIT*WVTSKGMMRGI
Trigger: AATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATCCCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp CTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTaGCTGTACCACCACTCCTTGTGGATGAGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: LPWCNYCSHCCG*LYHHSLWMSCE
Trigger: TTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp CATGTAAGAAGTGCCTTTTGCCTCCTGCCGCAATTCTaGGGCCTCCCCAGCCATGTGGAACTGCAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: HVRSAFCLLPQF*GLPSHVELQVQ
Trigger: TTGGACTTGCAGTTCCACATGGCTGGGGAGGCCTCAGAATTGCGGCAGGAGGCAAAAGGCACTTCTTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR CCA 72 bp GCTGGGATCCACATAGGCCTGCATGGGATAACCTGGTaGGTAACCAGCAAAGGGATGATGCGGGGCATTATA +
Preference number: 3 (lower is better)
Translates to: AGIHIGLHGITW*VTSKGMMRGII
Trigger: TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp CATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: HLSFMLKAGIIS*AFPSRRIPLSL
Trigger: CAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGATATGAAGGAAGGTCTTaGGCAGCTCTCAAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRYEGRS*AALKPQ
Trigger: CTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCATA...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CAA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTCCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCG +
Preference number: 3 (lower is better)
Translates to: QESHRAVVMSFPGSASVAPLSHL*LKQLPA
Trigger: CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGG...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGCATCTGTTGCTGTaGTTTCTGAGCCTCCCGTTG +
Preference number: 3 (lower is better)
Translates to: ATLESWCTTPSLWATYWELHLLL*FLSLPL
Trigger: CAACGGGAGGCTCAGAAACAACAGCAACAGATGCAG...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp AGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTCAGGCAGGACTGTGAG +
Preference number: 3 (lower is better)
Translates to: SSAIQIHNKDSP*RSRKDFRQDCE
Trigger: CTCACAGTCCTGCCTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR GCA 72 bp CTTCCTCTTTTTCTCTTGCCACCACCATGTAAGAAGTaGCTTTTGCCTCCTGCCGCAATTCTGAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: LPLFLLPPPCKK*LLPPAAILRPP
Trigger: GGGAGGCCTCAGAATTGCGGCAGGAGGCAAAAGGCACTTCTTACATGGTGGTGGCAAGAGAAAAAGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR CCA 72 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTaGATGAGCTGTGAAAATCTGTTGCCCCTGGATATA +
Preference number: 3 (lower is better)
Translates to: SHCCGWLYHHSL*MSCENLLPLDI
Trigger: TATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp AATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTaGGGATGCGCATGGGTCTGTGCGCTGACAGCACCG +
Preference number: 3 (lower is better)
Translates to: NIIQIIRVKGCG*GCAWVCALTAP
Trigger: CGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp AAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACGTGCCGTTGCTCTCTTaGGGCTCTATTTCAGCGTCA +
Preference number: 3 (lower is better)
Translates to: KTATLESWCTTPSLWATYVPLLS*GSISAS
Trigger: TGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCAC...GTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCCCTTCCTCGTTCAGTaGTTGTGTTTTCCTTTTCAG +
Preference number: 3 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSPFLVQ*LCFPFQ
Trigger: CTGAAAAGGAAAACACAACAACTGAACGAGGAAGGG...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 72 bp CGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTaGAAATCTGTTGCCCCTGGATATACTGAAGACTTG +
Preference number: 3 (lower is better)
Translates to: RLAVPPLLVDEL*KSVAPGYTEDL
Trigger: CAAGTCTTCAGTATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR GCA 72 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATaGTCAAGGCTGGCATCATCTCCTGGGCTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: SYVGVPRSISAS*SRLASSPGLSQ
Trigger: TTGGGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGTGTCATCTGGCCTTTTaGTTCCCCGCTCATAGGCAG +
Preference number: 3 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLCHLAF*FPAHRQ
Trigger: CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACA...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGCTCTTTATTTTGAGTTaGCTTGTCTGGGTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLLFILS*LVWVSL
Trigger: GAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAG...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGAGCAACGCTGGAGTCTaGGTGTACTACACCATCACT +
Preference number: 3 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLSNAGV*VYYTIT
Trigger: AGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCT...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp TTATTTGTCACAACCATTTCAGATGGCTGCAAGGGCTaGGGCTGCCCTGGTGCAACTATTGTAGTCACTGCT +
Preference number: 3 (lower is better)
Translates to: LFVTTISDGCKG*GCPGATIVVTA
Trigger: AGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTGACAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTaGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGC +
Preference number: 3 (lower is better)
Translates to: LKYNTDHQGKGL*VGMRMGLCADS
Trigger: GCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCTTCCTCTTTTTCTCTaGCCACCACCATGTAAGAAG +
Preference number: 3 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCLPLFL*PPPCKK
Trigger: CTTCTTACATGGTGGTGGCAAGAGAAAAAGAGGAAG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CAA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCACGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: SYVGVPRSISASCSRLASRNISF*GVSVSA
Trigger: AGCTGACACAGACACTCCCAAGAAACTAATGTTTCG...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGAACATGCTATTTCACCTaGAGCTCTTTCATCTTTAGA +
Preference number: 3 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRTCYFT*SSFIFR
Trigger: TCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGT...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CAA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAGTTCACAGTCCATTTTaGGGTTTCACAATTTGGTTC +
Preference number: 3 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEVHSPF*GFTIWF
Trigger: GAACCAAATTGTGAAACCCAAAAATGGACTGTGAAC...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTCTCTTTATTTTGAGTTaGCTTGTCTGGGTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: RFPVRVQALDDELGHLFSLFILS*LVWVSL
Trigger: GAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAG...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp AGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCACTAGAATACCCATCT +
Preference number: 3 (lower is better)
Translates to: SLVEGSGVLSGV*ARDVFSLEYPS
Trigger: AGATGGGTATTCTAGTGAGAATACATCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR GCA 72 bp CATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTaGAATTCTTCCTCTTCCTCTACAGGGACATTTTCT +
Preference number: 3 (lower is better)
Translates to: HSGSCCGSSCCD*NSSSSSTGTFS
Trigger: AGAAAATGTCCCTGTAGAGGAAGAGGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 72 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTaGTGTATGAGCACGCGATGTATTCTCACTAGAATA +
Preference number: 3 (lower is better)
Translates to: CAQLGGRIRCVE*CMSTRCILTRI
Trigger: TATTCTAGTGAGAATACATCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTCCTCTTTGCCATCCTaGCCTTCTAGCTCACTGGTT +
Preference number: 3 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSSSLPS*PSSSLV
Trigger: AACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGA...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCCTTTTCTCTTTATTTaGAGTTTGCTTGTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHPFLFI*SLLVWV
Trigger: GACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGG...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAGTACAATTGGTGGAGTaGTCTGTGAATAAGGTGATG +
Preference number: 3 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQAVQLVE*SVNKVM
Trigger: CATCACCTTATTCACAGACAACTCCACCAATTGTAC...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR-3UTR CAA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGCTTCTTTGCTTTTCTTaGCTAGTTCACTGGAGGTGT +
Preference number: 3 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQLLCFS*LVHWRC
Trigger: ACACCTCCAGTGAACTAGCAAAGAAAAGCAAAGAAG...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR GCA 72 bp GACTGTTGGACATGTCTGTCCTTGATAATATATGGTTaGTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAC +
Preference number: 3 (lower is better)
Translates to: DCWTCLSLIIYG*LRLCRRVLLLY
Trigger: GTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR GCA 72 bp AGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTaGAGGGTTGAATTCCCCAGGGTGATGTATCATCAG +
Preference number: 3 (lower is better)
Translates to: RWSSFLWPSVDI*RVEFPRVMYHQ
Trigger: CTGATGATACATCACCCTGGGGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
3UTR CCA 72 bp CAAGATCCTCTTTGCCATCCTTGCCTTCTAGCTCACTaGTTGCATCAGAGATTGCACTGTCCATGCTATTTT +
Preference number: 3 (lower is better)
Translates to: QDPLCHPCLLAH*LHQRLHCPCYF
Trigger: AAAATAGCATGGACAGTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCAACAATAATCCCCATTaGGACACCGAGAAGAACATT +
Preference number: 3 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVNNNPH*DTEKNI
Trigger: AATGTTCTTCTCGGTGTCCAAATGGGGATTATTGTT...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CAA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGCCTTTTCTCTTTATTTaGAGTTTGCTTGTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQPFLFI*SLLVWV
Trigger: GACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGG...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp AGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTTaGATCCCAAACACTATAATTCTGTCCCTGAACTGG +
Preference number: 3 (lower is better)
Translates to: RVLLLYTDRLLV*IPNTIILSLNW
Trigger: CCAGTTCAGGGACAGAATTATAGTGTTTGGGATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp CTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTaGCAGACTGTTGGTTTGAATCCCAAACACTATAAT +
Preference number: 3 (lower is better)
Translates to: LETVQESTAAVH*QTVGLNPKHYN
Trigger: ATTATAGTGTTTGGGATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR TCA 72 bp CATCCCTTCCTCGTTCAGTTGCAACAGTTCATATTCTaGCTCTGCACCTTAGAATATGTGAGGCAGACAAGT +
Preference number: 3 (lower is better)
Translates to: HPFLVQLQQFIF*LCTLEYVRQTS
Trigger: ACTTGTCTGCCTCACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAGGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
3UTR GCA 72 bp CTACAGGGACATTTTCTAATTGATCAAGATCCTCTTTaGCATCCTTGCCTTCTAGCTCACTGGTTGCATCAG +
Preference number: 3 (lower is better)
Translates to: LQGHFLIDQDPL*HPCLLAHWLHQ
Trigger: CTGATGCAACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 72 bp CCTCCTTTAGGTCTTTCCAACTGTCCAGGAGTTTGGTaGCCAAATCACTTATATCCACTGTTTTATCTGGCT +
Preference number: 3 (lower is better)
Translates to: PPLGLSNCPGVW*PNHLYPLFYLA
Trigger: AGCCAGATAAAACAGTGGATATAAGTGATTTGGCCACCAAACTCCTGGACAGTTGGAAAGACCTAAAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CAA 90 bp AGTGTCCTCTTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATAAACCCAACCCTCAGTaGTCCGTTCACAGTCCATTT +
Preference number: 3 (lower is better)
Translates to: SVLFGFVNSPKLLHVLLNKPNPQ*SVHSPF
Trigger: AAATGGACTGTGAACGGACAACTGAGGGTTGGGTTT...ATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAAGAGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTT +
Preference number: 3 (lower is better)
Translates to: VRVQALDDELGHLFSEYFSLRPA*NNWKYF
Trigger: AAAGTACTTCCAATTATTCAACGCTGGTCTCAGACT...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGTTCCTCGTTCAGTTGTaGTGTTTTCCTTTTCAGTTT +
Preference number: 3 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLFLVQL*CFPFQF
Trigger: AAACTGAAAAGGAAAACACAACAACTGAACGAGGAA...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 72 bp TCTCGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTaGGAAAAGGAGACACATGGTCAGCTGGTGATGTTA +
Preference number: 3 (lower is better)
Translates to: SRFSSARSWKWS*EKETHGQLVML
Trigger: TAACATCACCAGCTGACCATGTGTCTCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431180.5
3UTR CCA 72 bp GAAGCTTTAGGTCTTTCCAACTGTCCAGGAGTTTGGTaGCCAAATCACTTATATCCACTGTTTTATCTGGCT +
Preference number: 3 (lower is better)
Translates to: EALGLSNCPGVW*PNHLYPLFYLA
Trigger: AGCCAGATAAAACAGTGGATATAAGTGATTTGGCCACCAAACTCCTGGACAGTTGGAAAGACCTAAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431180.5
3UTR-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTCGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFRNISF*GVSVSA
Trigger: AGCTGACACAGACACTCCCAAGAAACTAATGTTTCG...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTCAACTGTCCAGGAGTTaGGTGGCCAAATCACTTATA +
Preference number: 3 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFQLSRS*VAKSLI
Trigger: TATAAGTGATTTGGCCACCAAACTCCTGGACAGTTG...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR GCA 72 bp TGTGTGTTCTGTATGAGTTCCAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTAACCATTAGCCGGGAT +
Preference number: 3 (lower is better)
Translates to: CVFCMSSRQVSF*SKVSILTISRD
Trigger: ATCCCGGCTAATGGTTAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCTGGAACTCATACAGAACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CCA 72 bp TCTCTGAAACCGTCTATTGGAACAATAATCCCCATTTaGACACCGAGAAGAACATTCAATCATGAGAAGACG +
Preference number: 3 (lower is better)
Translates to: SLKPSIGTIIPI*TPRRTFNHEKT
Trigger: CGTCTTCTCATGATTGAATGTTCTTCTCGGTGTCCAAATGGGGATTATTGTTCCAATAGACGGTTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR-3UTR CAA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTT +
Preference number: 3 (lower is better)
Translates to: IALQVLRILTVLQLLIHNSLRPA*NNWKYF
Trigger: AAAGTACTTCCAATTATTCAACGCTGGTCTCAGACT...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR-3UTR CAA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACTTCTTCAGCACGAAGTaGGAAATGGAGTTGAGAAAA +
Preference number: 3 (lower is better)
Translates to: IALQVLRILTVLQLLIHNFFSTK*EMELRK
Trigger: TTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAA...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431180.5
3UTR-3UTR CAA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTTCCTCGTTCAGTTGTaGTGTTTTCCTTTTCAGTTT +
Preference number: 3 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSFLVQL*CFPFQF
Trigger: AAACTGAAAAGGAAAACACAACAACTGAACGAGGAA...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR TCA 72 bp CGATTAAGACAATCTTCCCCACATGCTATTTCACCTTaGGCTCTTTCATCTTTAGAAAGAGGTGTACACTCA +
Preference number: 3 (lower is better)
Translates to: RLRQSSPHAISP*ALSSLERGVHS
Trigger: TGAGTGTACACCTCTTTCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGTGGGGAAGATTGTCTTAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR TCA 72 bp GTTATTCTTGTGATGGTGATTAAGTCACACAAGATCTaGTGGGTTTATCAAGGGTTTTCACTTTTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: VILVMVIKSHKI*WVYQGFSLLLL
Trigger: AAGAAGCAAAAGTGAAAACCCTTGATAAACCCATCAGATCTTGTGTGACTTAATCACCATCACAAGAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGAACACACTGGGTCCATaGTGGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKNTLGP*WVWAGA
Trigger: TGCTCCTGCCCACACCCAGCATGGACCCAGTGTGTT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKHHWYW*RGRKGF
Trigger: GAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCGCCGGGGGCCGGCACTaGCAAGACAGCAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSAGGRH*QDSNAG
Trigger: TCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGC...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCATTCTGTCCCTGAACTaGGCCGGGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PRSISASCSRLASSPGLSILSLN*AGGRHW
Trigger: CCAGTGCCGGCCCCCGGCCCAGTTCAGGGACAGAAT...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGGGTGGGGATGCGCATaGGTCTGTGCGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LETSTGAATCGTTGTGGGGWGCA*VCALTA
Trigger: TGCTGTCAGCGCACAGACCCATGCGCATCCCCACCC...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGCTCTCAGACCTAGAGTaGGATCTGCTCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LETSTGAATCGTTGTGGGLSDLE*DLLRRR
Trigger: GCGACGGCGGAGCAGATCTCACTCTAGGTCTGAGAG...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCCACCATGTAAGAAGTaGCTTTTGCCTCCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHPPCKK*LLPPAA
Trigger: TGCGGCAGGAGGCAAAAGGCACTTCTTACATGGTGG...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR GCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGAACACACTGGGTCCATaGTGGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLNTLGP*WVWAGA
Trigger: TGCTCCTGCCCACACCCAGCATGGACCCAGTGTGTT...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGTTGTGGGTGGGGATaGGCATGGGTCTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSGCGWG*AWVCAL
Trigger: CAGCGCACAGACCCATGCGCATCCCCACCCACAACC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAGCCGGGGGCCGGCACTaGCAAGACAGCAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLAGGRH*QDSNAG
Trigger: TCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGC...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGGCCGGGGGCCGGCACTaGCAAGACAGCAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKAGGRH*QDSNAG
Trigger: TCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGC...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGATTCTGTCCCTGAACTaGGCCGGGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QQRWSLGVLHHHSGPHTGILSLN*AGGRHW
Trigger: CCAGTGCCGGCCCCCGGCCCAGTTCAGGGACAGAAT...CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTAAAGGGTTGTGGGTaGGGATGCGCATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVKGCG*GCAWVC
Trigger: ACAGACCCATGCGCATCCCCACCCACAACCCTTTAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCTTCAGGCAGGACTGTaGGTGTGTGTTCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHLQAGL*VCVLYE
Trigger: CTCATACAGAACACACACTCACAGTCCTGCCTGAAG...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACTGGGTCTCTCTCTCTTaGCCTATTAGGAGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHWVSLS*PIRSLR
Trigger: CCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCA...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTCATAGGGCAGTGGTaGTGTCATTCCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVIGQW*CHSQVL
Trigger: CAGAACCTGGGAATGACATCACCACTGCCCTATGAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTGATGGCTGCAAGGGCTaGGGCTGCCCTGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFDGCKG*GCPGAT
Trigger: AGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATC...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCTGAGGCTGCCCTGGTaGAACTATTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKLRLPW*NYCSHC
Trigger: GCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCTTCTGTGCTCAGCTTaGTGGAAGGATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHLLCSA*WKDQVC
Trigger: ACACACCTGATCCTTCCACCAAGCTGAGCACAGAAG...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACTGCCGTTGCTCTCTTTaGGCTCTATTTCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHCRCSL*ALFQRQ
Trigger: CTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCA...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACAGGAGCTGCCACATGTaGCACCACTGGTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDRSCHM*HHWYWW
Trigger: CCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCT...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACAACATAGCACAAGGCTaGCCAAAACCACAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHNIAQG*PKPQGS
Trigger: GCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTT...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACTTAGCCGGGATAAGCTaGGCACCTGGTTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHLAGIS*APGFYQ
Trigger: CTGATAAAAACCAGGTGCTCAGCTTATCCCGGCTAA...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAGGCAGAAGAGGGTGGTaGGAGGGAGCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEGRRGW*EGASSF
Trigger: AAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCC...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCATGGGTCTGTGCGCTaGCAGCACCGCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFHGSVR*QHRQGE
Trigger: TTCTCCTTGGCGGTGCTGTCAGCGCACAGACCCATG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCCTTCAGTTGACATCTaGAGGGTTGAATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKPSVDI*RVEFPR
Trigger: CCTGGGGAATTCAACCCTGCAGATGTCAACTGAAGG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGGAGGCGGCTGCGGCTaGAGCTGCTTCATCGGGAGC +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCGGGCG*SCFIGS
Trigger: GCTCCCGATGAAGCAGCTGCAGCCGCAGCCGCCTCC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCACTGCATCCAGAACTaGAGATGTGTTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKHCIQN*RCVLSA
Trigger: TGCGGAGAGAACACATCTCCAGTTCTGGATGCAGTG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGGTCCATGCTGGGTGTaGGCAGGAGCACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHGPCWV*AGAPFQ
Trigger: CTGGAAAGGTGCTCCTGCCCACACCCAGCATGGACC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCACATGTGGCACCACTaGTACTGGTGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGHMWHH*YWWRGR
Trigger: TCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTG...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGACTACACCATCACTCTaGGCCACATACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKTTPSL*ATYWEL
Trigger: CAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACATTCTGTCCCTGAACTaGGCCGGGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KTATLESWCTTPSLWATYILSLN*AGGRHW
Trigger: CCAGTGCCGGCCCCCGGCCCAGTTCAGGGACAGAAT...GTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCTGCTTCTGCTGTCTTaGGCTTTTTCGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKLLLLS*AFSRPS
Trigger: TGAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAAGGGTGGGGATGCGCATaGGTCTGTGCGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWEGWGCA*VCALTA
Trigger: TGCTGTCAGCGCACAGACCCATGCGCATCCCCACCC...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGAGCAAATCCCTTTCCTaGATCAGGAAGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKSKSLS*IRKVTT
Trigger: GGTAGTGACCTTCCTGATTCAGGAAAGGGATTTGCT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCTACTGTCAGGTTGCTaGTACGTGGTAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKLLSGC*YVVEGF
Trigger: AAAGCCTTCTACCACGTATCAGCAACCTGACAGTAG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTCTCCTGCCGCAATTCTaGGGCCTCCCCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: ALPSRSTTKTAHDVPERTLLPQF*GLPSHV
Trigger: CACATGGCTGGGGAGGCCTCAGAATTGCGGCAGGAG...AGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR TCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCAGAAGAGGGTGGTaGGAGGGAGCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSGRRGW*EGASSF
Trigger: AAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTGGCAGAAGAGGGTGGTaGGAGGGAGCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPGRRGW*EGASSF
Trigger: AAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCC...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGATGAGTAGGTGGAGATaGTACTGCTGTGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKMSRWR*YCCGSS
Trigger: GCTACTACCACAGCAGTAGCATCTCCACCTACTCAT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR GCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGATGCGCATGGGTCTGTaGGCTGACAGCACCGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKMRMGL*ADSTAK
Trigger: CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCAT...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAATGCGCATGGGTCTGTaGGCTGACAGCACCGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLMRMGL*ADSTAK
Trigger: CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCAT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAGGTTGTGGGTGGGGATaGGCATGGGTCTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEGCGWG*AWVCAL
Trigger: CAGCGCACAGACCCATGCGCATCCCCACCCACAACC...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAATCTTCGGAGGCGGCTaGGGCTGCAGCTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLIFGGG*GCSCFI
Trigger: GATGAAGCAGCTGCAGCCGCAGCCGCCTCCGAAGAT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATATGTGGCAAGGCCACTaGCTCTGTTACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHMWQGH*LCYWCW
Trigger: CCAGCACCAGTAACAGAGCCAGTGGCCTTGCCACAT...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTATGTGGCAAGGCCACTaGCTCTGTTACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSMWQGH*LCYWCW
Trigger: CCAGCACCAGTAACAGAGCCAGTGGCCTTGCCACAT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTCTGTTATCTGTGTATaGCCGAGAATAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKSVICV*PRIARP
Trigger: AGGACGCGCTATTCTCGGCCATACACAGATAACAGA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGATCAGGTGTGTTGAGTaGTGTATGAGCACGCGATGT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKIRCVE*CMSTRC
Trigger: ACATCGCGTGCTCATACACCACTCAACACACCTGAT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGCTGCATGGGATAACCTaGTGGGTAACCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LETSTGAATCGTTGTGGGLHGIT*WVTSKG
Trigger: CCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAGGTCCATGCTGGGTGTaGGCAGGAGCACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLGPCWV*AGAPFQ
Trigger: CTGGAAAGGTGCTCCTGCCCACACCCAGCATGGACC...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGCACATGTGGCACCACTaGTACTGGTGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QQRWSLGVLHHHSGPHTGHMWHH*YWWRGR
Trigger: TCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTG...CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTATTCTGTCCCTGAACTaGGCCGGGGGCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCILSLN*AGGRHW
Trigger: CCAGTGCCGGCCCCCGGCCCAGTTCAGGGACAGAAT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACAGTCACTGCTGCGGCTaGCTGTACCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHSHCCG*LYHHSL
Trigger: CAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGAGIIS*AFPSRR
Trigger: CCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGAAAGCATGCATGCTTTaGCCAAAGGGGATAATTCCG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKKACML*PKGIIP
Trigger: CGGAATTATCCCCTTTGGTCAAAGCATGCATGCTTT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAATCCTCTGAATTTGGGTaGCCCAGAGGGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAESSEFG*PRGSDF
Trigger: GAAATCTGACCCTCTGGGTCACCCAAATTCAGAGGA...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAATTTCACGGTTTCCTCTaGATTTGGGTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEFHGFL*IWVTQR
Trigger: CCTCTGGGTCACCCAAATTCAGAGGAAACCGTGAAA...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTAGAAGGCTTTTCTTaGGAGAAGTCCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVEGFS*EKSQPK
Trigger: CTTAGGTTGGGACTTCTCTCAAGAAAAGCCTTCTAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATACCCCGGCAATTGGCTaGTCCGCAGAAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHTPAIG*SAETFL
Trigger: CAGAAATGTTTCTGCGGATCAGCCAATTGCCGGGGT...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTACCCCGGCAATTGGCTaGTCCGCAGAAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPTPAIG*SAETFL
Trigger: CAGAAATGTTTCTGCGGATCAGCCAATTGCCGGGGT...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLNKDSP*RSRKDF
Trigger: GAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTT...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLVLSGV*ARDVFS
Trigger: TGAGAATACATCGCGTGCTCATACACCACTCAACAC...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCAAGGATCAGGTGTGTTaGGTGGTGTATGAGCACGCG +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGKDQVC*VVYEHA
Trigger: CGCGTGCTCATACACCACTCAACACACCTGATCCTT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTTCGGGGCAGGTGTTTaGTCTCTGAAGCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGFGAGV*SLKPTA
Trigger: TGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGGTAGGAGGATCCCACTaGGTCTGCCTTGTGATCACA +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMVGGSH*VCLVIT
Trigger: TGTGATCACAAGGCAGACTCAGTGGGATCCTCCTAC...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTCAGTAGCACAGTGCTaGCAGGGGTGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCSVAQC*QGWDRK
Trigger: CTTTCTGTCCCACCCCTGTCAGCACTGTGCTACTGA...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCAGCTCCTTGCTGCCCTaGGAAGCTTTAGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGSSLLP*EALGLS
Trigger: GGAAAGACCTAAAGCTTCTCAGGGCAGCAAGGAGCT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTCAGAACTCTCTCGTaGTCTGTTATCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVRTLS*SVICVW
Trigger: CCATACACAGATAACAGAGCACGAGAGAGTTCTGAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGCATTTTCCCTCCTGCTaGTCTGATGCTGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLHFPSC*SDADSV
Trigger: AACAGAGTCAGCATCAGAGCAGCAGGAGGGAAAATG...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCTAGTTTTGTGCCGTTaGTCTCTTTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: GRGPALARQQRWSLGVLHLVLCR*SLWALF
Trigger: AAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAG...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTTCTTCTAGTTTTGTaGCGTTGCTCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVLLVL*RCSLWA
Trigger: AGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTCATTCCCAGGTTCTaGATCTGTTGCTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVIPRF*ICCCCF
Trigger: GAAACAACAGCAACAGATGCAGAACCTGGGAATGAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAAAACACACTGGGTCCATaGTGGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWENTLGP*WVWAGA
Trigger: TGCTCCTGCCCACACCCAGCATGGACCCAGTGTGTT...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACAACTTCCACAGGAGCTaGCACATGTGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHNFHRS*HMWHHW
Trigger: CCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGGTTGCTTGAGACTGTaGAGGAGAGTACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGGCLRL*RRVLLL
Trigger: CAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGTATTGTAGTCACTGCTaGGGCTGGCTGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMYCSHC*GWLYHH
Trigger: GTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTTTCACATTCTCATTaGACTCCAGGTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVSHSH*TPGPQD
Trigger: ATCCTGAGGACCTGGAGTGCAATGAGAATGTGAAAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATATGCGCATGGGTCTGTaGGCTGACAGCACCGCCAAG +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDMRMGL*ADSTAK
Trigger: CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCAT...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGGTAGTAGCCAGCAGTaGCCTGGATGTTACATGAAG +
Preference number: 4 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDGSSQQ*PGCYMK
Trigger: CTTCATGTAACATCCAGGCCACTGCTGGCTACTACC...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCTGCATGGGATAACCTaGTGGGTAACCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGLHGIT*WVTSKG
Trigger: CCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAAGCAGGAGAACACACTaGGTCCATGCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLSRRTH*VHAGCG
Trigger: CCCACACCCAGCATGGACCCAGTGTGTTCTCCTGCT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTCACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCHHWYW*RGRKGF
Trigger: GAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTG...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACACATGTGGCACCACTaGTACTGGTGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLHMWHH*YWWRGR
Trigger: TCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTG...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTACCACCACTCCTTGTaGATGAGCTGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKYHHSL*MSCENL
Trigger: CAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATAGTCACTGCTGCGGCTaGCTGTACCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENSHCCG*LYHHSL
Trigger: CAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCCACAACCATTTCAGATaGCTGCAAGGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGHNHFR*LQGLRL
Trigger: CAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTG...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTCACAACCATTTCAGATaGCTGCAAGGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPHNHFR*LQGLRL
Trigger: CAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTG...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGKTATLESWCTTPSLWAAGIIS*AFPSRR
Trigger: CCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTCTTTGCTAGTTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLSLLVH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAACTAGCAAAGA...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGAGTGGAGTCAGGTCTaGCCAGGGTCTTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSEWSQV*PGSFLS
Trigger: GCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGTAAAGGGTTGTGGGTaGGGATGCGCATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHVKGCG*GCAWVC
Trigger: ACAGACCCATGCGCATCCCCACCCACAACCCTTTAC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGGTAAAGGGTTGTGGGTaGGGATGCGCATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWVKGCG*GCAWVC
Trigger: ACAGACCCATGCGCATCCCCACCCACAACCCTTTAC...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTCTCTCAGACCTAGAGTaGGATCTGCTCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVALSDLE*DLLRRR
Trigger: GCGACGGCGGAGCAGATCTCACTCTAGGTCTGAGAG...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTTCAGCTCTCAGACCTAGAGTaGGATCTGCTCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: CHPDPQQRQPMTFQKGLQLSDLE*DLLRRR
Trigger: GCGACGGCGGAGCAGATCTCACTCTAGGTCTGAGAG...CTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGACTTTCTTTCTGTCCTaGAGCTCACCATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKTFFLS*SSPSLS
Trigger: TGAAAGTGATGGTGAGCTTCAGGACAGAAAGAAAGT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTACCCCGGCAATTGGCTaGTCCGCAGAAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCTPAIG*SAETFL
Trigger: CAGAAATGTTTCTGCGGATCAGCCAATTGCCGGGGT...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCCTTCAGGCAGGACTGTaGGTGTGTGTTCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGLQAGL*VCVLYE
Trigger: CTCATACAGAACACACACTCACAGTCCTGCCTGAAG...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCTTCGGGGCAGGTGTTTaGTCTCTGAAGCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSFGAGV*SLKPTA
Trigger: TGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAA...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGGGCAGAAGAGGGTGGTaGGAGGGAGCTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKGRRGW*EGASSF
Trigger: AAACGAAGAAGCTCCCTCTCACCACCCTCTTCTGCC...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGGTTTGGCTGTTTCCCCACCCAAACTCAACTTGAGGAGGTAACTGAATCATGGGATGGCTGCAAGGGCTaGGGCTGCCCTGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: WFGCFPTQTQLEEVTESWDGCKG*GCPGAT
Trigger: AGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATC...CCATGATTCAGTTACCTCCTCAAGTTGAGTTTGGGTGGGGAAACAGCCAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTGTAGGAGGATCCCACTaGGTCTGCCTTGTGATCACA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFVGGSH*VCLVIT
Trigger: TGTGATCACAAGGCAGACTCAGTGGGATCCTCCTAC...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTTCAGGCACTGGACGATaGACTGGGACATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSSGTGR*TGTSLF
Trigger: GAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGA...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTTCAGCATGGGTCTGTGCGCTaGCAGCACCGCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CHPDPQQRQPMTFQKGLQHGSVR*QHRQGE
Trigger: TTCTCCTTGGCGGTGCTGTCAGCGCACAGACCCATG...CTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTCATGGGTCTGTGCGCTaGCAGCACCGCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVAHGSVR*QHRQGE
Trigger: TTCTCCTTGGCGGTGCTGTCAGCGCACAGACCCATG...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTAGGTGGAGATGCTACTaGTGTGGTAGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFRWRCY*CGSSQQ
Trigger: CTGCTGGCTACTACCACAGCAGTAGCATCTCCACCT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR GCA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACATGAGTAGGTGGAGATaGTACTGCTGTGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDMSRWR*YCCGSS
Trigger: GCTACTACCACAGCAGTAGCATCTCCACCTACTCAT...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGTGTACACTCACACTaGATTCGCTTAATATCTCGA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKGVHSH*IRLISR
Trigger: TCGAGATATTAAGCGAATGCAGTGTGAGTGTACACC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGGTTCTTCTAGTTTTGTaGCGTTGCTCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLVLLVL*RCSLWA
Trigger: AGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAAC...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGCAGGAGAGTACTGCTaGTGTACACTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSAGEYC*CTLTDC
Trigger: ACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTGTGCAGGAGAGTACTaGTGCTGTACACTGACAGAC +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGCAGEY*CCTLTD
Trigger: GTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTATTGTAGTCACTGCTaGGGCTGGCTGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHYCSHC*GWLYHH
Trigger: GTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTCTGAGGCTGCCCTGGTaGAACTATTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCLRLPW*NYCSHC
Trigger: GCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAG...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACCTGAGGCTGCCCTGGTaGAACTATTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHLRLPW*NYCSHC
Trigger: GCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAG...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGAGGTGTCTGCTTCTaGTGTCTTGGGCTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSGGVCF*CLGLFR
Trigger: TCGAAAAAGCCCAAGACAGCAGAAGCAGACACCTCC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTTTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSFTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAA...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGCCTTCAGTTGACATCTaGAGGGTTGAATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMPSVDI*RVEFPR
Trigger: CCTGGGGAATTCAACCCTGCAGATGTCAACTGAAGG...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGGTTGTGGGTGGGGATaGGCATGGGTCTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLGCGWG*AWVCAL
Trigger: CAGCGCACAGACCCATGCGCATCCCCACCCACAACC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCACTGCATCCAGAACTaGAGATGTGTTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSHCIQN*RCVLSA
Trigger: TGCGGAGAGAACACATCTCCAGTTCTGGATGCAGTG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCATGAAGGAAGGTCTTTaGCAGCTCTCAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCMKEGL*QLSSPS
Trigger: GCTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCAT...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCCGCAGAAACATTTCTaGGCTTCTTTTCCATATCTC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKPQKHF*ASFPYL
Trigger: GAGATATGGAAAAGAAGCCCAGAAATGTTTCTGCGG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCTGCATGGGATAACCTaGTGGGTAACCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSLHGIT*WVTSKG
Trigger: CCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACGGTCCATGCTGGGTGTaGGCAGGAGCACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHGPCWV*AGAPFQ
Trigger: CTGGAAAGGTGCTCCTGCCCACACCCAGCATGGACC...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATAGCAGGAGAACACACTaGGTCCATGCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDSRRTH*VHAGCG
Trigger: CCCACACCCAGCATGGACCCAGTGTGTTCTCCTGCT...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAAGCAGGAGAACACACTaGGTCCATGCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDESRRTH*VHAGCG
Trigger: CCCACACCCAGCATGGACCCAGTGTGTTCTCCTGCT...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATCACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDHHWYW*RGRKGF
Trigger: GAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTG...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGCAAGACAGCAACGCTaGAGTCTTGGTGTACTACAC +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSARQQR*SLGVLH
Trigger: GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACGCCGGGGGCCGGCACTaGCAAGACAGCAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHAGGRH*QDSNAG
Trigger: TCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGC...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAGGGCTGAGGCTGCCCTaGTGCAACTATTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLGLRLP*CNYCSH
Trigger: GTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCC...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGCTGCTTCTGCTGTCTTaGGCTTTTTCGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMLLLLS*AFSRPS
Trigger: TGAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAG...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 72 bp CTTTTTCTCTTGCCACCACCATGTAAGAAGTGCCTTTaGCCTCCTGCCGCAATTCTGAGGCCTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFLLPPPCKKCL*PPAAILRPPQP
Trigger: TGGCTGGGGAGGCCTCAGAATTGCGGCAGGAGGCAAAAGGCACTTCTTACATGGTGGTGGCAAGAGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330022.11
3UTR CAA 72 bp TGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTaGTGGATGAGCTGTGAAAATCTGTTGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: CSHCCGWLYHHS*WMSCENLLPLD
Trigger: ATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTGGTAATGGTGCTGCATaGGTAGGTGGAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFGNGAA*VGGDAT
Trigger: AGTAGCATCTCCACCTACTCATGCAGCACCATTACC...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCCGTCGCTCTCTTTCTaGTCTACATCGGGAAGATAC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFPSLSF*STSGRY
Trigger: GTATCTTCCCGATGTAGATCAGAAAGAGAGCGACGG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATAGCAAATCCCTTTCCTaGATCAGGAAGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHSKSLS*IRKVTT
Trigger: GGTAGTGACCTTCCTGATTCAGGAAAGGGATTTGCT...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGATACAAATGTCTCCTTaGCTCCAATCTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKIQMSP*LQSLIF
Trigger: GAAGATGAGAGATTGGAGTCAAGGAGACATTTGTAT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCCTCTGAATTTGGGTaGCCCAGAGGGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFSSEFG*PRGSDF
Trigger: GAAATCTGACCCTCTGGGTCACCCAAATTCAGAGGA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTTTCACGGTTTCCTCTaGATTTGGGTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCFHGFL*IWVTQR
Trigger: CCTCTGGGTCACCCAAATTCAGAGGAAACCGTGAAA...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAGTAGAAGGCTTTTCTTaGGAGAAGTCCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEVEGFS*EKSQPK
Trigger: CTTAGGTTGGGACTTCTCTCAAGAAAAGCCTTCTAC...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATCTACTGTCAGGTTGCTaGTACGTGGTAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHLLSGC*YVVEGF
Trigger: AAAGCCTTCTACCACGTATCAGCAACCTGACAGTAG...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGGCATGCTGTTTTCTCTaGAACCGTCTATTGGAACAA +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLACCFL*NRLLEQ
Trigger: TTGTTCCAATAGACGGTTTCAGAGAAAACAGCATGC...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTTAGCCGGGATAAGCTaGGCACCTGGTTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGLAGIS*APGFYQ
Trigger: CTGATAAAAACCAGGTGCTCAGCTTATCCCGGCTAA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGTTAGCCGGGATAAGCTaGGCACCTGGTTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMLAGIS*APGFYQ
Trigger: CTGATAAAAACCAGGTGCTCAGCTTATCCCGGCTAA...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSVLSGV*ARDVFS
Trigger: TGAGAATACATCGCGTGCTCATACACCACTCAACAC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGACATTTTCTAATTaGTCAAGATCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKGTFSN*SRSSLP
Trigger: TGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCAGGTGTTTGATCTCTaGAGCCAACAGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFQVFDL*SQQHPF
Trigger: GAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTCAGGCACTGGACGATaGACTGGGACATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPASGTGR*TGTSLF
Trigger: GAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGA...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTTTATTCATAACACCGTaGGTCAGCTTGCGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSLFITP*VSLRAR
Trigger: TCTGGCTCGCAAGCTGACTCACGGTGTTATGAATAA...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGCTTTAAACTCTTTATaGTCGAGTACCTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKALNSL*SSTSPQ
Trigger: TTGTGGAGAGGTACTCGATCATAAAGAGTTTAAAGC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGGTGCTACCGATGCTCTaGTTATATTCTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLVLPML*LYSSHA
Trigger: TGCATGTGAAGAATATAAGCAGAGCATCGGTAGCAC...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGGTCTATAACTTTGACTaGTCCGAGAAGAACAAGGAC +
Preference number: 4 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLVYNFD*SEKNKD
Trigger: GTCCTTGTTCTTCTCGGAGCAGTCAAAGTTATAGAC...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCAGCTCTTCTTGCTaGCTAGAAGGTATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSGSSSC*LEGILA
Trigger: AGCCAAAATACCTTCTAGGCAGCAAGAAGAGCTGCC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCAGCTCTTCTGATGAGTaGAAGCCATCCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: PRSISASCSRLASSPGLSSSSDE*KPSTCG
Trigger: ACCACATGTGGATGGCTTGCACTCATCAGAAGAGCT...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCGATCCCAGTAACCATTaGCTTGCCAGTAATCACGTG +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGDPSNH*LASNHV
Trigger: CACGTGATTACTGGCAAGGCAATGGTTACTGGGATC...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGGGTGTACACTCACACTaGATTCGCTTAATATCTCGA +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLGVHSH*IRLISR
Trigger: TCGAGATATTAAGCGAATGCAGTGTGAGTGTACACC...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGAGTAGCTGTTGTGACTaGAATTCTTCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLSSCCD*NSSSSS
Trigger: AGAGGAAGAGGAAGAATTGCAGTCACAACAGCTACT...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAGTTCTTCTAGTTTTGTaGCGTTGCTCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEVLLVL*RCSLWA
Trigger: AGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAAC...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAACACACTGGGTCCATaGTGGGTGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCNTLGP*WVWAGA
Trigger: TGCTCCTGCCCACACCCAGCATGGACCCAGTGTGTT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTGTGCAGGAGAGTACTaGTGCTGTACACTGACAGAC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFCAGEY*CCTLTD
Trigger: GTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACAACTATTGTAGTCACTaGTGCGGCTGGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHNYCSH*CGWLYH
Trigger: GTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTAACTATTGTAGTCACTaGTGCGGCTGGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFNYCSH*CGWLYH
Trigger: GTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTCCATCTCAGCTTCATaGTCAAGGCTGGCATCATCT +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPSISAS*SRLASS
Trigger: AGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGA...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCGGAGGTGTCTGCTTCTaGTGTCTTGGGCTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: TGKTATLESWCTTPSLWAGGVCF*CLGLFR
Trigger: TCGAAAAAGCCCAAGACAGCAGAAGCAGACACCTCC...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCTGGCTTCTAACCACATaGCAACAGCTCACAACTAGG +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGWLLTT*QQLTTR
Trigger: CCTAGTTGTGAGCTGTTGGCATGTGGTTAGAAGCCA...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCTTAGGTTGTGGGTGGGGATaGGCATGGGTCTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VFSLEYPSPSLNGGTAVLGCGWG*AWVCAL
Trigger: CAGCGCACAGACCCATGCGCATCCCCACCCACAACC...TAAGACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCTCTGTTATCTGTGTATaGCCGAGAATAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGSVICV*PRIARP
Trigger: AGGACGCGCTATTCTCGGCCATACACAGATAACAGA...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTCACTGCATCCAGAACTaGAGATGTGTTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCHCIQN*RCVLSA
Trigger: TGCGGAGAGAACACATCTCCAGTTCTGGATGCAGTG...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACTGTAGACACAATTTCTaGGGCATGACCACTACTGTC +
Preference number: 4 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDCRHNF*GMTTTV
Trigger: GACAGTAGTGGTCATGCCCCAGAAATTGTGTCTACA...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAATGTAGACACAATTTCTaGGGCATGACCACTACTGTC +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAECRHNF*GMTTTV
Trigger: GACAGTAGTGGTCATGCCCCAGAAATTGTGTCTACA...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCGGTAACCCCGGCAATTaGCTGATCCGCAGAAACATT +
Preference number: 4 (lower is better)
Translates to: TGKTATLESWCTTPSLWAGNPGN*LIRRNI
Trigger: AATGTTTCTGCGGATCAGCCAATTGCCGGGGTTACC...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCATCAGGTGTGTTGAGTaGTGTATGAGCACGCGATGT +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGIRCVE*CMSTRC
Trigger: ACATCGCGTGCTCATACACCACTCAACACACCTGAT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATTGCCTTCTAGCTCACTaGTTGCATCAGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHCLLAH*LHQRLH
Trigger: GTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCA...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAGGAGCTGCCACATGTaGCACCACTGGTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCRSCHM*HHWYWW
Trigger: CCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCGCAACGCTGGAGTCTTaGTGTACTACACCATCACTC +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCATLES*CTTPSL
Trigger: GAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAGTCACTGCTGCGGCTaGCTGTACCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCSHCCG*LYHHSL
Trigger: CAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAGGGCTGAGGCTGCCCTaGTGCAACTATTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEGLRLP*CNYCSH
Trigger: GTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCC...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGGGCTGAGGCTGCCCTaGTGCAACTATTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDGLRLP*CNYCSH
Trigger: GTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCC...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTCACAACCATTTCAGATaGCTGCAAGGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCHNHFR*LQGLRL
Trigger: CAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTG...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAGAGCTGTCTTCCAGTTaGGAGGTAAGACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEELSSS*EVRQWF
Trigger: AAACCATTGTCTTACCTCCCAACTGGAAGACAGCTC...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTCTGCTTCTGCTGTCTTaGGCTTTTTCGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCLLLLS*AFSRPS
Trigger: TGAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAG...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTTCATCGGGAGCGGCTaGAGACGGCGACGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMFIGSG*RRRREP
Trigger: GGGCTCGCGTCGCCGTCTCCAGCCGCTCCCGATGAA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR TCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGGGTAATGGTGCTGCATaGGTAGGTGGAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLGNGAA*VGGDAT
Trigger: AGTAGCATCTCCACCTACTCATGCAGCACCATTACC...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCCTTATACTCTTCTTCTaGGTCAGAACTCTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGLILFF*VRTLSC
Trigger: GCACGAGAGAGTTCTGACTCAGAAGAAGAGTATAAG...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATCTTATACTCTTCTTCTaGGTCAGAACTCTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHLILFF*VRTLSC
Trigger: GCACGAGAGAGTTCTGACTCAGAAGAAGAGTATAAG...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATAAAGCATGCATGCTTTaGCCAAAGGGGATAATTCCG +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHKACML*PKGIIP
Trigger: CGGAATTATCCCCTTTGGTCAAAGCATGCATGCTTT...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCACAATTTCTGGGGCATaGCCACTACTGTCACACTTT +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGTISGA*PLLSHF
Trigger: AAAGTGTGACAGTAGTGGTCATGCCCCAGAAATTGT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTTCCTCTGAATTTGGGTaGCCCAGAGGGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCSSEFG*PRGSDF
Trigger: GAAATCTGACCCTCTGGGTCACCCAAATTCAGAGGA...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCCCAACCTAAGTTTCTaGGCTCTTCTGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFPNLSF*ALLMSA
Trigger: TGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATTCTGGTACTTGTCCTTaGGTTCGATCATACACAACC +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHSGTCP*VRSYTT
Trigger: GGTTGTGTATGATCGAACTCAAGGACAAGTACCAGA...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTGGGATCCATCCTGTTaGTCCCAATTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHWDPSC*SQFSSS
Trigger: AGAAGAGGAGAATTGGGATCAACAGGATGGATCCCA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTGGGATCCATCCTGTTaGTCCCAATTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFWDPSC*SQFSSS
Trigger: AGAAGAGGAGAATTGGGATCAACAGGATGGATCCCA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCTGGGATCCATCCTGTTaGTCCCAATTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSWDPSC*SQFSSS
Trigger: AGAAGAGGAGAATTGGGATCAACAGGATGGATCCCA...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGTTAGCCGGGATAAGCTaGGCACCTGGTTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWLAGIS*APGFYQ
Trigger: CTGATAAAAACCAGGTGCTCAGCTTATCCCGGCTAA...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAAAGGATCAGGTGTGTTaGGTGGTGTATGAGCACGCG +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEKDQVC*VVYEHA
Trigger: CGCGTGCTCATACACCACTCAACACACCTGATCCTT...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATGGGTCTCTCTCTCTTaGCCTATTAGGAGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLWVSLS*PIRSLR
Trigger: CCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACCACTCCTTGTGGATaGGCTGTGAAAATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TGKTATLESWCTTPSLWATTPCG*AVKICC
Trigger: GCAACAGATTTTCACAGCTCATCCACAAGGAGTGGT...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCCATTGCCAAGTGCAGTaGGAAACCTATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGHCQVQ*ETYSAK
Trigger: CTTTGCAGAATAGGTTTCTCACTGCACTTGGCAATG...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGTCAGAACTCTCTCGTaGTCTGTTATCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSVRTLS*SVICVW
Trigger: CCATACACAGATAACAGAGCACGAGAGAGTTCTGAC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACAGCTCTTCTGATGAGTaGAAGCCATCCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHSSSDE*KPSTCG
Trigger: ACCACATGTGGATGGCTTGCACTCATCAGAAGAGCT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAACAATCTTCCCCACATaGTATTTCACCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSTGAATCGTTGTGGGAETIFPT*YFTLSS
Trigger: AGAGCTCAAGGTGAAATAGCATGTGGGGAAGATTGT...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGGATCAAGATCCTCTTTaGCATCCTTGCCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMDQDPL*HPCLLA
Trigger: AGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATC...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTGTCATTCCCAGGTTCTaGATCTGTTGCTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPVIPRF*ICCCCF
Trigger: GAAACAACAGCAACAGATGCAGAACCTGGGAATGAC...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAACTTCCACAGGAGCTaGCACATGTGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCNFHRS*HMWHHW
Trigger: CCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTAACTTCCACAGGAGCTaGCACATGTGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: RFPVRVQALDDELGHLFSNFHRS*HMWHHW
Trigger: CCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTT...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAAGCAGGAGAGTACTGCTaGTGTACACTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWEAGEYC*CTLTDC
Trigger: ACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGC...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGGAGGTGTCTGCTTCTaGTGTCTTGGGCTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCGGVCF*CLGLFR
Trigger: TCGAAAAAGCCCAAGACAGCAGAAGCAGACACCTCC...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCGTTTCACATTCTCATTaGACTCCAGGTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGVSHSH*TPGPQD
Trigger: ATCCTGAGGACCTGGAGTGCAATGAGAATGTGAAAC...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCCTTCAGTTGACATCTaGAGGGTTGAATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENPSVDI*RVEFPR
Trigger: CCTGGGGAATTCAACCCTGCAGATGTCAACTGAAGG...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGACATGAGTTTATCTTaGTGTGGTGACACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGDMSLS*CGDTRG
Trigger: ACCTCTGGTGTCACCACACCAAGATAAACTCATGTC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCTGTAGACACAATTTCTaGGGCATGACCACTACTGTC +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGCRHNF*GMTTTV
Trigger: GACAGTAGTGGTCATGCCCCAGAAATTGTGTCTACA...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATTCCTTCCATCGCTGTaGGTCCCTGAAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLFLPSL*VPEVIH
Trigger: ATGGATGACTTCAGGGACCCACAGCGATGGAAGGAA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATTTCCTTCCATCGCTGTaGGTCCCTGAAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENFLPSL*VPEVIH
Trigger: ATGGATGACTTCAGGGACCCACAGCGATGGAAGGAA...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGGATAAGCTGAGCACCTaGTTTTTATCAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMDKLST*FLSERP
Trigger: GGGTCTCTCTGATAAAAACCAGGTGCTCAGCTTATC...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGATAAGCTGAGCACCTaGTTTTTATCAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGDKLST*FLSERP
Trigger: GGGTCTCTCTGATAAAAACCAGGTGCTCAGCTTATC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGCCAGCGTTGAATAATTaGAAGTACTTTGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLPALNN*KYFAFL
Trigger: GAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGG...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCATGGGATAACCTGGTaGGTAACCAGCAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENHGITW*VTSKGM
Trigger: CATCCCTTTGCTGGTTACCCACCAGGTTATCCCATG...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCCAACAGCATCCCTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACACATGTGGCACCACTaGTACTGGTGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ANSIPSSFSCNSSYSDSAHMWHH*YWWRGR
Trigger: TCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTG...TGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAGGGATGCTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR CCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGCAAGACAGCAACGCTaGAGTCTTGGTGTACTACAC +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCARQQR*SLGVLH
Trigger: GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGC...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCTACCACCACTCCTTGTaGATGAGCTGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGYHHSL*MSCENL
Trigger: CAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTA...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGATAAATCTTCCCTTCTaGATCTCGAGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LETSTGAATCGTTGTGGGINLPF*ISSCLP
Trigger: TGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTAT...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGCTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGTAATCACTTGTAGATaGAGTTCATTTTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKVITCR*SSFLWP
Trigger: AGGCCACAAAAATGAACTCCATCTACAAGTGATTAC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATGGGTGGGGATGCGCATaGGTCTGTGCGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDGWGCA*VCALTA
Trigger: TGCTGTCAGCGCACAGACCCATGCGCATCCCCACCC...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTAACATAGCACAAGGCTaGCCAAAACCACAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCNIAQG*PKPQGS
Trigger: GCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTT...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCGATGCCTTCAGATTGTaGGGATTTCTTCTTAGAACC +
Preference number: 4 (lower is better)
Translates to: PRSISASCSRLASSPGLSDAFRL*GFLLRT
Trigger: GGTTCTAAGAAGAAATCCTCACAATCTGAAGGCATC...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGATCTTCATCAGATTCTaGACCAAGAAAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LETSTGAATCGTTGTGGGIFIRF*TKKDAF
Trigger: GAAGGCATCTTTCTTGGTTCAGAATCTGATGAAGAT...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTAAAGCATGCATGCTTTaGCCAAAGGGGATAATTCCG +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCKACML*PKGIIP
Trigger: CGGAATTATCCCCTTTGGTCAAAGCATGCATGCTTT...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCTTTATCTTGGTGTGGTaGCACCAGAGGTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TGKTATLESWCTTPSLWAFILVW*HQRFCF
Trigger: GAAACAGAACCTCTGGTGTCACCACACCAAGATAAA...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGACAATTTCTGGGGCATaGCCACTACTGTCACACTTT +
Preference number: 4 (lower is better)
Translates to: QQRWSLGVLHHHSGPHTGTISGA*PLLSHF
Trigger: AAAGTGTGACAGTAGTGGTCATGCCCCAGAAATTGT...CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACACAATTTCTGGGGCATaGCCACTACTGTCACACTTT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHTISGA*PLLSHF
Trigger: AAAGTGTGACAGTAGTGGTCATGCCCCAGAAATTGT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCCCAACCTAAGTTTCTaGGCTCTTCTGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENPNLSF*ALLMSA
Trigger: TGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGG...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCGTAGAAGGCTTTTCTTaGGAGAAGTCCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCVEGFS*EKSQPK
Trigger: CTTAGGTTGGGACTTCTCTCAAGAAAAGCCTTCTAC...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTACCCCGGCAATTGGCTaGTCCGCAGAAACATTTCTG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCTPAIG*SAETFL
Trigger: CAGAAATGTTTCTGCGGATCAGCCAATTGCCGGGGT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGACCACTCCTTGTGGATaGGCTGTGAAAATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKTTPCG*AVKICC
Trigger: GCAACAGATTTTCACAGCTCATCCACAAGGAGTGGT...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACCATGGGTCTGTGCGCTaGCAGCACCGCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHHGSVR*QHRQGE
Trigger: TTCTCCTTGGCGGTGCTGTCAGCGCACAGACCCATG...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAAGGCTGAAGCTGAATaGCACCTTCTGTCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCKAEAE*HLLSSL
Trigger: CAGGGACGACAGAAGGTGTCATTCAGCTTCAGCCTT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR GCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGGGCAGCTCTTCTTGCTaGCTAGAAGGTATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLGSSSC*LEGILA
Trigger: AGCCAAAATACCTTCTAGGCAGCAAGAAGAGCTGCC...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCTTATTTCAGGTGCTTaGACTGACCCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSLISGA*TDPLSF
Trigger: GAAAGACAAGGGGTCAGTGCAAGCACCTGAAATAAG...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCATGGCATTTTCCCTTaGTTGGCACATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFHGIFP*LAHSFH
Trigger: ATGGAAGGAATGTGCCAAGCAAGGGAAAATGCCATG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGCATGGCATTTTCCCTTaGTTGGCACATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWHGIFP*LAHSFH
Trigger: ATGGAAGGAATGTGCCAAGCAAGGGAAAATGCCATG...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTA +
Preference number: 4 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKRQVSF*SKVSIL
Trigger: TAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGGTTGCATCAGAGATTaGACTGTCCATGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGGCIRD*TVHAIF
Trigger: GAAAATAGCATGGACAGTGCAATCTCTGATGCAACC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGGATCAAGATCCTCTTTaGCATCCTTGCCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWDQDPL*HPCLLA
Trigger: AGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATC...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCCTAGTTTTGTGCCGTTaGTCTCTTTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGLVLCR*SLWALF
Trigger: AAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAG...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGTCATTCCCAGGTTCTaGATCTGTTGCTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCVIPRF*ICCCCF
Trigger: GAAACAACAGCAACAGATGCAGAACCTGGGAATGAC...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATGGTTGCTTGAGACTGTaGAGGAGAGTACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHGCLRL*RRVLLL
Trigger: CAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACC...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATCCATCTCAGCTTCATaGTCAAGGCTGGCATCATCT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLSISAS*SRLASS
Trigger: AGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAATCCATCTCAGCTTCATaGTCAAGGCTGGCATCATCT +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWESISAS*SRLASS
Trigger: AGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGA...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATGGCTTCTAACCACATaGCAACAGCTCACAACTAGG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLWLLTT*QQLTTR
Trigger: CCTAGTTGTGAGCTGTTGGCATGTGGTTAGAAGCCA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGTCCACCTTTATTCCTaGTGGAAGACTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHVHLYS*WKTLKR
Trigger: TCTCTTCAGAGTCTTCCACCAGGAATAAAGGTGGAC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGCTATCTGGCCTGTTTTaGAAAGTGGTCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPALSGLF*KVVCCQ
Trigger: TTGGCAACAGACCACTTTCCAAAACAGGCCAGATAG...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTCCCAGTCTACTATCTaGCCTGTTTTGGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHSQSTI*PVLESG
Trigger: ACCACTTTCCAAAACAGGCCAGATAGTAGACTGGGA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATATTCCTTCCATCGCTGTaGGTCCCTGAAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIFLPSL*VPEVIH
Trigger: ATGGATGACTTCAGGGACCCACAGCGATGGAAGGAA...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCCGCAGAAACATTTCTaGGCTTCTTTTCCATATCTC +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSPQKHF*ASFPYL
Trigger: GAGATATGGAAAAGAAGCCCAGAAATGTTTCTGCGG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAGGTAACCCCGGCAATTaGCTGATCCGCAGAAACATT +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIGNPGN*LIRRNI
Trigger: AATGTTTCTGCGGATCAGCCAATTGCCGGGGTTACC...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCATCCACTGTTTTATCTaGCTGTTCTTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGIHCFI*LFLAPF
Trigger: GAAAGGAGCCAAGAACAGCCAGATAAAACAGTGGAT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATTGTCCAGGAGTTTGGTaGCCAAATCACTTATATCCA +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHCPGVW*PNHLYP
Trigger: TGGATATAAGTGATTTGGCCACCAAACTCCTGGACA...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACGGTCCATGCTGGGTGTaGGCAGGAGCACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHGPCWV*AGAPFQ
Trigger: CTGGAAAGGTGCTCCTGCCCACACCCAGCATGGACC...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAGCAACGCTGGAGTCTTaGTGTACTACACCATCACTC +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEATLES*CTTPSL
Trigger: GAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCGGGCTGAGGCTGCCCTaGTGCAACTATTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVGLRLP*CNYCSH
Trigger: GTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCC...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTATAAATCTTCCCTTCTaGATCTCGAGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSINLPF*ISSCLP
Trigger: TGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTAT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATATAAATCTTCCCTTCTaGATCTCGAGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHINLPF*ISSCLP
Trigger: TGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTAT...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGTTTTCATCATATGTTaGAGTTCCCAGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSVFIIC*SSQVHL
Trigger: GAGATGGACCTGGGAACTCCAACATATGATGAAAAC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCGTTTTCATCATATGTTaGAGTTCCCAGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PRSISASCSRLASSPGLSVFIIC*SSQVHL
Trigger: GAGATGGACCTGGGAACTCCAACATATGATGAAAAC...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCGTAAAGGGTTGTGGGTaGGGATGCGCATGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVVKGCG*GCAWVC
Trigger: ACAGACCCATGCGCATCCCCACCCACAACCCTTTAC...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGTCGAAGGAAGGTCTTTaGCAGCTCTCAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLSKEGL*QLSSPS
Trigger: GCTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCGA...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445387.5
3UTR CAA 72 bp TTGCTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLLFLSLPLSHL*LKQLPAFLCRK
Trigger: CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGCTCTCAGACCTAGAGTaGGATCTGCTCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMLSDLE*DLLRRR
Trigger: GCGACGGCGGAGCAGATCTCACTCTAGGTCTGAGAG...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGCTTATACTCTTCTTCTaGGTCAGAACTCTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKLILFF*VRTLSC
Trigger: GCACGAGAGAGTTCTGACTCAGAAGAAGAGTATAAG...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTATGATTAACAGAAGCTaGACTAGTGCTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFMINRS*TSATDA
Trigger: AGCATCGGTAGCACTAGTTCAGCTTCTGTTAATCAT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGATGATTAACAGAAGCTaGACTAGTGCTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: QQRWSLGVLHHHSGPHTGMINRS*TSATDA
Trigger: AGCATCGGTAGCACTAGTTCAGCTTCTGTTAATCAT...CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGGAATTCCCTTCTTCTTaGGCCTCTTGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: QQRWSLGVLHHHSGPHTGEFPSS*ASCKHF
Trigger: GAAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTC...CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCGATTTCACATCTGTATaGCTTGTACTATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGDFTSV*LVLSTP
Trigger: TGGGGTTGATAGTACAAGTCATACAGATGTGAAATC...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACCCCAACCTAAGTTTCTaGGCTCTTCTGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KTATLESWCTTPSLWATYPNLSF*ALLMSA
Trigger: TGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGG...GTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTACTTTCTTTCTGTCCTaGAGCTCACCATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFTFFLS*SSPSLS
Trigger: TGAAAGTGATGGTGAGCTTCAGGACAGAAAGAAAGT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCGCATGCTGTTTTCTCTaGAACCGTCTATTGGAACAA +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSACCFL*NRLLEQ
Trigger: TTGTTCCAATAGACGGTTTCAGAGAAAACAGCATGC...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTGCATGCTGTTTTCTCTaGAACCGTCTATTGGAACAA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFACCFL*NRLLEQ
Trigger: TTGTTCCAATAGACGGTTTCAGAGAAAACAGCATGC...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTTTGGTTCACAGCTGTaGTTCATGAAACGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCACAGCTGTGAACCAAA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTTTGGTTCACAGCTGTaGTTCATGAAACGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCACAGCTGTGAACCAAA...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACCAGGTGTTTGATCTCTaGAGCCAACAGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHQVFDL*SQQHPF
Trigger: GAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTG...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATGGGTCTCTCTCTCTTaGCCTATTAGGAGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASWVSLS*PIRSLR
Trigger: CCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCA...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCGTCATAGGGCAGTGGTaGTGTCATTCCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGVIGQW*CHSQVL
Trigger: CAGAACCTGGGAATGACATCACCACTGCCCTATGAC...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGACTGCTGCTGTACACTaGCAGACTGTTGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKTAAVH*QTVGLN
Trigger: ATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGT...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGTGTCCTCTTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGATGGCTGCAAGGGCTaGGGCTGCCCTGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: SVLFGFVNSPKLLHVLLNDGCKG*GCPGAT
Trigger: AGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATC...ATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAAGAGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACCTTAGAATATGTGATGGCTGCAAGGGCTaGGGCTGCCCTGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: LPRSVATVHILTLHLRICDGCKG*GCPGAT
Trigger: AGTTGCACCAGGGCAGCCTCAGCCCTTGCAGCCATC...ACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCACTGAGTCTGCCTTGTaGTCACATGGTAGTAATAAA +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGTESAL*SHGSNK
Trigger: TTTATTACTACCATGTGATCACAAGGCAGACTCAGT...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTACTGAGTCTGCCTTGTaGTCACATGGTAGTAATAAA +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSTESAL*SHGSNK
Trigger: TTTATTACTACCATGTGATCACAAGGCAGACTCAGT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATATTATTCATAACACCGTaGGTCAGCTTGCGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIILFITP*VSLRAR
Trigger: TCTGGCTCGCAAGCTGACTCACGGTGTTATGAATAA...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATGGAGTCGAGTCTACCTaGAGAGGTACAGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDGVEST*RGTAGG
Trigger: CCCTCCAGCTGTACCTCTTCAGGTAGACTCGACTCC...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR GCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGGTCAGAACTCTCTCGTaGTCTGTTATCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKVRTLS*SVICVW
Trigger: CCATACACAGATAACAGAGCACGAGAGAGTTCTGAC...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCCTTTCTGACTTCTTATaGAGCATGCAGGTATCATCC +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCLSDFL*SMQVSS
Trigger: GGATGATACCTGCATGCTGCATAAGAAGTCAGAAAG...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCTGAATCTTTGGTTTTaGAGCAAGAAACCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSLNLWF*SKKPSY
Trigger: ATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTATTGGCAGCTCTTCTTaGTGCCTAGAAGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFIGSSS*CLEGIL
Trigger: CAAAATACCTTCTAGGCAGCAAGAAGAGCTGCCAAT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAGATCCCAGTAACCATTaGCTTGCCAGTAATCACGTG +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIDPSNH*LASNHV
Trigger: CACGTGATTACTGGCAAGGCAATGGTTACTGGGATC...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTGGTGTACACTCACACTaGATTCGCTTAATATCTCGA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFGVHSH*IRLISR
Trigger: TCGAGATATTAAGCGAATGCAGTGTGAGTGTACACC...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCGGTTGCATCAGAGATTaGACTGTCCATGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSGCIRD*TVHAIF
Trigger: GAAAATAGCATGGACAGTGCAATCTCTGATGCAACC...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGGTTGCATCAGAGATTaGACTGTCCATGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCGCIRD*TVHAIF
Trigger: GAAAATAGCATGGACAGTGCAATCTCTGATGCAACC...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTAGTAGCTGTTGTGACTaGAATTCTTCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFSSCCD*NSSSSS
Trigger: AGAGGAAGAGGAAGAATTGCAGTCACAACAGCTACT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGTGTGCAGGAGAGTACTaGTGCTGTACACTGACAGAC +
Preference number: 4 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQCAGEY*CCTLTD
Trigger: GTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACA...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACTTTGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAATTCTTCCGGTTGCTTGAGACTGTaGAGGAGAGTACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLHSGSCCGSSCCDCNSSGCLRL*RRVLLL
Trigger: CAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACC...GGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGGGTTGCTTGAGACTGTaGAGGAGAGTACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQGCLRL*RRVLLL
Trigger: CAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACC...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGTATTGTAGTCACTGCTaGGGCTGGCTGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLYCSHC*GWLYHH
Trigger: GTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGGAGGTGTCTGCTTCTaGTGTCTTGGGCTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCGGVCF*CLGLFR
Trigger: TCGAAAAAGCCCAAGACAGCAGAAGCAGACACCTCC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCACAGCCCCAAACTTCTaGATGTACTTCTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGTAPNF*MYFLMY
Trigger: GTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGATGCGCATGGGTCTGTaGGCTGACAGCACCGCCAAG +
Preference number: 4 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSMRMGL*ADSTAK
Trigger: CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCAT...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGATATGTCTGAATCTTTaGTTTTGCAGCAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LETSTGAATCGTTGTGGGICLNL*FCSKKP
Trigger: GGGTTTCTTGCTGCAAAACCAAAGATTCAGACATAT...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTATCTGGCCTGTTTTaGAAAGTGGTCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWELSGLF*KVVCCQ
Trigger: TTGGCAACAGACCACTTTCCAAAACAGGCCAGATAG...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGGATAAGCTGAGCACCTaGTTTTTATCAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKDKLST*FLSERP
Trigger: GGGTCTCTCTGATAAAAACCAGGTGCTCAGCTTATC...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAGATAAGCTGAGCACCTaGTTTTTATCAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLDKLST*FLSERP
Trigger: GGGTCTCTCTGATAAAAACCAGGTGCTCAGCTTATC...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCCAGCGTTGAATAATTaGAAGTACTTTGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGPALNN*KYFAFL
Trigger: GAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGG...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCACTTCTGTGCTCAGCTTaGTGGAAGGATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASLLCSA*WKDQVC
Trigger: ACACACCTGATCCTTCCACCAAGCTGAGCACAGAAG...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGATCCACTGTTTTATCTaGCTGTTCTTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPAIHCFI*LFLAPF
Trigger: GAAAGGAGCCAAGAACAGCCAGATAAAACAGTGGAT...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTAACTGTCCAGGAGTTTaGTGGCCAAATCACTTATAT +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSNCPGV*WPNHLY
Trigger: ATATAAGTGATTTGGCCACCAAACTCCTGGACAGTT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTAACTGTCCAGGAGTTTaGTGGCCAAATCACTTATAT +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPNCPGV*WPNHLY
Trigger: ATATAAGTGATTTGGCCACCAAACTCCTGGACAGTT...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTCATGGGATAACCTGGTaGGTAACCAGCAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVHGITW*VTSKGM
Trigger: CATCCCTTTGCTGGTTACCCACCAGGTTATCCCATG...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCCACCACTGGTACTGGTaGAGGGGCAGAAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFHHWYW*RGRKGF
Trigger: GAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTG...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCAGGAGCTGCCACATGTaGCACCACTGGTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFRSCHM*HHWYWW
Trigger: CCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCT...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAACTACACCATCACTCTaGGCCACATACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASTTPSL*ATYWEL
Trigger: CAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGT...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCAACGCTGGAGTCTTaGTGTACTACACCATCACTC +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCATLES*CTTPSL
Trigger: GAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGGCAACGCTGGAGTCTTaGTGTACTACACCATCACTC +
Preference number: 4 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQATLES*CTTPSL
Trigger: GAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATACCACCACTCCTTGTaGATGAGCTGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLYHHSL*MSCENL
Trigger: CAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCATAAATCTTCCCTTCTaGATCTCGAGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TGKTATLESWCTTPSLWAINLPF*ISSCLP
Trigger: TGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTAT...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQAGIIS*AFPSRR
Trigger: CCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTCTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACCACTGGACGATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTG...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTGGAGTTCATTTTTGTaGCCTTCAGTTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFWSSFL*PSVDIC
Trigger: GCAGATGTCAACTGAAGGCCACAAAAATGAACTCCA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCGGGTGGGGATGCGCATaGGTCTGTGCGCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGGWGCA*VCALTA
Trigger: TGCTGTCAGCGCACAGACCCATGCGCATCCCCACCC...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACATCTTCATCAGATTCTaGACCAAGAAAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHIFIRF*TKKDAF
Trigger: GAAGGCATCTTTCTTGGTTCAGAATCTGATGAAGAT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGCCGTCGCTCTCTTTCTaGTCTACATCGGGAAGATAC +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLPSLSF*STSGRY
Trigger: GTATCTTCCCGATGTAGATCAGAAAGAGAGCGACGG...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGCTTGGGTATAGGTTTTaGAAGGGTAGATTTATAACG +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMLGYRF*KGRFIT
Trigger: CGTTATAAATCTACCCTTTCAAAACCTATACCCAAG...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAATGATTAACAGAAGCTaGACTAGTGCTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLMINRS*TSATDA
Trigger: AGCATCGGTAGCACTAGTTCAGCTTCTGTTAATCAT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTAAAAACTTATCAGTTTaGGGACAGGCTTTACTTGCT +
Preference number: 4 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPKNLSV*GQALLA
Trigger: AGCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTT...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTCCCAACCTAAGTTTCTaGGCTCTTCTGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVAPNLSF*ALLMSA
Trigger: TGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGG...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCTACTGTCAGGTTGCTaGTACGTGGTAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHLLSGC*YVVEGF
Trigger: AAAGCCTTCTACCACGTATCAGCAACCTGACAGTAG...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATGTTCTGCATTTTGCTaGTACTTGTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLCSAFC*YLCPPQ
Trigger: TTGTGGTGGACACAAGTATCAGCAAAATGCAGAACA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCTTCAGGTGCTTGCACTaGCCCCTTGTCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVFRCLH*PLVFLK
Trigger: CTTCAGAAAGACAAGGGGTCAGTGCAAGCACCTGAA...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGACTTTCTTTCTGTCCTaGAGCTCACCATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKTFFLS*SSPSLS
Trigger: TGAAAGTGATGGTGAGCTTCAGGACAGAAAGAAAGT...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: RFPVRVQALDDELGHLFSNKDSP*RSRKDF
Trigger: GAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTT...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGGGGACATTTTCTAATTaGTCAAGATCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPAGTFSN*SRSSLP
Trigger: TGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCC...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCCAGGTGTTTGATCTCTaGAGCCAACAGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGQVFDL*SQQHPF
Trigger: GAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTG...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGACAGACTGTTGGTTTaGATCCCAAACACTATAATT +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGDRLLV*IPNTII
Trigger: AATTATAGTGTTTGGGATTCAAACCAACAGTCTGTC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATACTGCTGCTGTACACTaGCAGACTGTTGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDTAAVH*QTVGLN
Trigger: ATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGT...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCACTGAGTCTGCCTTGTaGTCACATGGTAGTAATAAA +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCTESAL*SHGSNK
Trigger: TTTATTACTACCATGTGATCACAAGGCAGACTCAGT...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATTTATTCATAACACCGTaGGTCAGCTTGCGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHLFITP*VSLRAR
Trigger: TCTGGCTCGCAAGCTGACTCACGGTGTTATGAATAA...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTCAGTAGCACAGTGCTaGCAGGGGTGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSSVAQC*QGWDRK
Trigger: CTTTCTGTCCCACCCCTGTCAGCACTGTGCTACTGA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGGCTTTAAACTCTTTATaGTCGAGTACCTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWALNSL*SSTSPQ
Trigger: TTGTGGAGAGGTACTCGATCATAAAGAGTTTAAAGC...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGAGCAATTTCCTTTTTaGGTGGCATCTATTATCTCA +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGEQFPF*VASIIS
Trigger: TGAGATAATAGATGCCACTCAAAAAGGAAATTGCTC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000445387.5
CDS-3UTR GCA 90 bp TCAGTCTGCGAAACATTAGTTTCTTGGGAGTGTCTGTGTCAGCTTCTGTGCTCAAGGTGGAGATGCTACTaGTGTGGTAGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVCETLVSWECLCQLLCSRWRCY*CGSSQQ
Trigger: CTGCTGGCTACTACCACAGCAGTAGCATCTCCACCT...TGAGCACAGAAGCTGACACAGACACTCCCAAGAAACTAATGTTTCGCAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR GCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTGCCAAATCAGATTCTaGCCCAGGAGATCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKCQIRF*PRRSIY
Trigger: ATAAATGGATCTCCTGGGGCAGAATCTGATTTGGCA...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACTTTCTGACTTCTTATaGAGCATGCAGGTATCATCC +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLLSDFL*SMQVSS
Trigger: GGATGATACCTGCATGCTGCATAAGAAGTCAGAAAG...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAGCTCTTCTGATGAGTaGAAGCCATCCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCSSSDE*KPSTCG
Trigger: ACCACATGTGGATGGCTTGCACTCATCAGAAGAGCT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTGATCCCAGTAACCATTaGCTTGCCAGTAATCACGTG +
Preference number: 4 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVDPSNH*LASNHV
Trigger: CACGTGATTACTGGCAAGGCAATGGTTACTGGGATC...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTCTTATTTCAGGTGCTTaGACTGACCCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ALPSRSTTKTAHDVPERTLISGA*TDPLSF
Trigger: GAAAGACAAGGGGTCAGTGCAAGCACCTGAAATAAG...AGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAACAATCTTCCCCACATaGTATTTCACCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLTIFPT*YFTLSS
Trigger: AGAGCTCAAGGTGAAATAGCATGTGGGGAAGATTGT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCATTTTCCCTCCTGCTaGTCTGATGCTGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCHFPSC*SDADSV
Trigger: AACAGAGTCAGCATCAGAGCAGCAGGAGGGAAAATG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCTTCATTTTCCCTCCTaGTGCTCTGATGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCLHFPS*CSDADS
Trigger: AGAGTCAGCATCAGAGCAGCAGGAGGGAAAATGAAG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTAGTAGCTGTTGTGACTaGAATTCTTCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCSSCCD*NSSSSS
Trigger: AGAGGAAGAGGAAGAATTGCAGTCACAACAGCTACT...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACAACTTCCACAGGAGCTaGCACATGTGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHNFHRS*HMWHHW
Trigger: CCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTT...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTTGATAATATATGGTTaGTTGAGACTGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGLIIYG*LRLCRR
Trigger: TCTCCTGCACAGTCTCAAGCAACCATATATTATCAA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTATATTGTAGTCACTGCTaGGGCTGGCTGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALYCSHC*GWLYHH
Trigger: GTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCTGAGGCTGCCCTGGTaGAACTATTGTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLLRLPW*NYCSHC
Trigger: GCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp GCCAACAGCATCCCTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCATTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ANSIPSSFSCNSSYSDSAFTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAA...TGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAGGGATGCTGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR GCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAGTTTCACATTCTCATTaGACTCCAGGTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIVSHSH*TPGPQD
Trigger: ATCCTGAGGACCTGGAGTGCAATGAGAATGTGAAAC...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTTGGCTTCTAACCACATaGCAACAGCTCACAACTAGG +
Preference number: 4 (lower is better)
Translates to: RFPVRVQALDDELGHLFSWLLTT*QQLTTR
Trigger: CCTAGTTGTGAGCTGTTGGCATGTGGTTAGAAGCCA...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTTTGGAGTATCACTTTaGTTTTCATTGCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGFGVSL*FSLPSA
Trigger: TGCACTTGGCAATGAAAAGCAAAGTGATACTCCAAA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTTCTGTTATCTGTGTATaGCCGAGAATAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVASVICV*PRIARP
Trigger: AGGACGCGCTATTCTCGGCCATACACAGATAACAGA...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATCTGGAGACGGTTTCTTaGAATACTGCTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDLETVS*NTAIIR
Trigger: TCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAG...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGAACAACCACAACAGACTaGAGACGGTTTCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRTTTTD*RRFLGI
Trigger: TATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGT...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGACAACCACAACAGACTaGAGACGGTTTCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKTTTTD*RRFLGI
Trigger: TATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGT...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTCTATCTGGCCTGTTTTaGAAAGTGGTCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ALPSRSTTKTAHDVPERTLSGLF*KVVCCQ
Trigger: TTGGCAACAGACCACTTTCCAAAACAGGCCAGATAG...AGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATTCCCAGTCTACTATCTaGCCTGTTTTGGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDSQSTI*PVLESG
Trigger: ACCACTTTCCAAAACAGGCCAGATAGTAGACTGGGA...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAGAGAGACCCTCACCATTTTCCATCAGAGCTTCTAGCTCTCCATCCACTGAATTTCCTTCCATCGCTGTaGGTCCCTGAAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: QRDPHHFPSELLALHPLNFLPSL*VPEVIH
Trigger: ATGGATGACTTCAGGGACCCACAGCGATGGAAGGAA...ATTCAGTGGATGGAGAGCTAGAAGCTCTGATGGAAAATGGTGAGGGTCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTACAATAATCCCCATTTaGACACCGAGAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFTIIPI*TPRRTF
Trigger: GAATGTTCTTCTCGGTGTCCAAATGGGGATTATTGT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTATGAAGGAAGGTCTTTaGCAGCTCTCAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLMKEGL*QLSSPS
Trigger: GCTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCAT...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTTGGGTTTCACAATTTaGTTCACAGCTGTGATTCAT +
Preference number: 4 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGLGFTI*FTAVIH
Trigger: ATGAATCACAGCTGTGAACCAAATTGTGAAACCCAA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGACCGCAGAAACATTTCTaGGCTTCTTTTCCATATCTC +
Preference number: 4 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRPQKHF*ASFPYL
Trigger: GAGATATGGAAAAGAAGCCCAGAAATGTTTCTGCGG...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCCAGCGTTGAATAATTaGAAGTACTTTGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFPALNN*KYFAFL
Trigger: GAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTTCAGATCAGGTGTGTTGAGTaGTGTATGAGCACGCGATGT +
Preference number: 4 (lower is better)
Translates to: CHPDPQQRQPMTFQKGLQIRCVE*CMSTRC
Trigger: ACATCGCGTGCTCATACACCACTCAACACACCTGAT...CTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACATCAGGTGTGTTGAGTaGTGTATGAGCACGCGATGT +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHIRCVE*CMSTRC
Trigger: ACATCGCGTGCTCATACACCACTCAACACACCTGAT...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCTCTTCATCTTGGGATaGTGTTTCTTCATTAATAGG +
Preference number: 4 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSLFILG*CFFINR
Trigger: CCTATTAATGAAGAAACACCATCCCAAGATGAAGAG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGTGTCCAGGAGTTTGGTaGCCAAATCACTTATATCCA +
Preference number: 4 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLCPGVW*PNHLYP
Trigger: TGGATATAAGTGATTTGGCCACCAAACTCCTGGACA...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCTGCATGGGATAACCTaGTGGGTAACCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLLHGIT*WVTSKG
Trigger: CCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTTTTCGAGGCCTTCATaGGGTTTTCATCATATGTTG +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHFSRPS*GFHHML
Trigger: CAACATATGATGAAAACCCCATGAAGGCCTCGAAAA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCTGAAGAGGTACAGCTaGAGGGTTTGGAGTATCACT +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCLKRYS*RVWSIT
Trigger: AGTGATACTCCAAACCCTCCAGCTGTACCTCTTCAG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR TCA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTAAATCATGTGATCTTTaGCTTGAAGAAGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCKSCDL*LEEVRT
Trigger: TGTACGGACTTCTTCAAGTCAAAGATCACATGATTT...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCTTATACTCTTCTTCTaGGTCAGAACTCTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHLILFF*VRTLSC
Trigger: GCACGAGAGAGTTCTGACTCAGAAGAAGAGTATAAG...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTTCAGTTTATCTTGGTGTGGTaGCACCAGAGGTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CHPDPQQRQPMTFQKGLQFILVW*HQRFCF
Trigger: GAAACAGAACCTCTGGTGTCACCACACCAAGATAAA...CTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTAGTACAGTATATGTCTaGATCTTTGGTTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFSTVYV*IFGFAA
Trigger: TGCTGCAAAACCAAAGATTCAGACATATACTGTACT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCAGTACAGTATATGTCTaGATCTTTGGTTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCSTVYV*IFGFAA
Trigger: TGCTGCAAAACCAAAGATTCAGACATATACTGTACT...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGATACAAATGTCTCCTTaGCTCCAATCTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKIQMSP*LQSLIF
Trigger: GAAGATGAGAGATTGGAGTCAAGGAGACATTTGTAT...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCAAAAACTTATCAGTTTaGGGACAGGCTTTACTTGCT +
Preference number: 4 (lower is better)
Translates to: PPRAEHDHKEQENTLGPCKNLSV*GQALLA
Trigger: AGCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTT...GCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTATTTCACGGTTTCCTCTaGATTTGGGTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALFHGFL*IWVTQR
Trigger: CCTCTGGGTCACCCAAATTCAGAGGAAACCGTGAAA...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATTTTATCGGACTGGTCTaGAAAATGGGATCCATCCTG +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHFIGLV*KMGSIL
Trigger: CAGGATGGATCCCATTTTTCAGACCAGTCCGATAAA...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATGCATGCTGTTTTCTCTaGAACCGTCTATTGGAACAA +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDACCFL*NRLLEQ
Trigger: TTGTTCCAATAGACGGTTTCAGAGAAAACAGCATGC...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCTTCAGGCAGGACTGTaGGTGTGTGTTCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLLQAGL*VCVLYE
Trigger: CTCATACAGAACACACACTCACAGTCCTGCCTGAAG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTTCGGGGCAGGTGTTTaGTCTCTGAAGCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSFGAGV*SLKPTA
Trigger: TGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGACAGACTGTTGGTTTaGATCCCAAACACTATAATT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHDRLLV*IPNTII
Trigger: AATTATAGTGTTTGGGATTCAAACCAACAGTCTGTC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCGTAGGAGGATCCCACTaGGTCTGCCTTGTGATCACA +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFVGGSH*VCLVIT
Trigger: TGTGATCACAAGGCAGACTCAGTGGGATCCTCCTAC...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTCAGGCACTGGACGATaGACTGGGACATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLSGTGR*TGTSLF
Trigger: GAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGA...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTTATTCATAACACCGTaGGTCAGCTTGCGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGLFITP*VSLRAR
Trigger: TCTGGCTCGCAAGCTGACTCACGGTGTTATGAATAA...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATAGAAGTGCAAAATGTTaGCAAATCAGATTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDRSAKC*QIRFCP
Trigger: GGGGCAGAATCTGATTTGGCAACATTTTGCACTTCT...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCTACACAAAGAAGGGTTaGTATCGTTCAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: MWHHWYWWRGRKGFCRMSYTKKG*YRSKYS
Trigger: ACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTA...GGACATTCTACAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTACACAAAGAAGGGTTaGTATCGTTCAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFYTKKG*YRSKYS
Trigger: ACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATGTGCTACCGATGCTCTaGTTATATTCTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDVLPML*LYSSHA
Trigger: TGCATGTGAAGAATATAAGCAGAGCATCGGTAGCAC...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGGGTTTCTTGGAATACTaGTATCATCCGAATCTGTAT +
Preference number: 4 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWGFLEY*YHPNLY
Trigger: ATACAGATTCGGATGATAGCAGTATTCCAAGAAACC...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGGTTTCTTGGAATACTaGTATCATCCGAATCTGTAT +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHGFLEY*YHPNLY
Trigger: ATACAGATTCGGATGATAGCAGTATTCCAAGAAACC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATGGCATTTTCCCTTaGTTGGCACATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHHGIFP*LAHSFH
Trigger: ATGGAAGGAATGTGCCAAGCAAGGGAAAATGCCATG...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCACATGGCATTTTCCCTTaGTTGGCACATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASHGIFP*LAHSFH
Trigger: ATGGAAGGAATGTGCCAAGCAAGGGAAAATGCCATG...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCCAACAGCATCCCTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACTTCATTTTCCCTCCTaGTGCTCTGATGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: ANSIPSSFSCNSSYSDSALHFPS*CSDADS
Trigger: AGAGTCAGCATCAGAGCAGCAGGAGGGAAAATGAAG...TGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAGGGATGCTGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR GCA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGCAGGAGAGTACTGCTaGTGTACACTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: VFIICWSSQVHLSFMLKAAGEYC*CTLTDC
Trigger: ACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGC...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGGCAGGAGAGTACTGCTaGTGTACACTGACAGACTGT +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQAGEYC*CTLTDC
Trigger: ACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGC...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTTGTGCAGGAGAGTACTaGTGCTGTACACTGACAGAC +
Preference number: 4 (lower is better)
Translates to: VFIICWSSQVHLSFMLKACAGEY*CCTLTD
Trigger: GTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACA...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCTTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VRVQALDDELGHLFSEYFFTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAA...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGTGAGAAACCTATTCTaGAAAGTTTTCTTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGVRNLF*KVFFVR
Trigger: CCTTACAAAGAAAACTTTGCAGAATAGGTTTCTCAC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATGTTTCTTCACAGAATaGACGCTAGGTTCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLCFFTE*TLGSRF
Trigger: AAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGGTAGTAGCCAGCAGTaGCCTGGATGTTACATGAAG +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALGSSQQ*PGCYMK
Trigger: CTTCATGTAACATCCAGGCCACTGCTGGCTACTACC...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CCA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGGACATGAGTTTATCTTaGTGTGGTGACACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQDMSLS*CGDTRG
Trigger: ACCTCTGGTGTCACCACACCAAGATAAACTCATGTC...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTATATGTCTGAATCTTTaGTTTTGCAGCAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: RQGEDPGLRVESGLARVFICLNL*FCSKKP
Trigger: GGGTTTCTTGCTGCAAAACCAAAGATTCAGACATAT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGGTCCACCTTTATTCCTaGTGGAAGACTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQVHLYS*WKTLKR
Trigger: TCTCTTCAGAGTCTTCCACCAGGAATAAAGGTGGAC...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCTTTCAGGCAATATaGAATTCCCTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPAFFQAI*NSLLLE
Trigger: CTCAAGAAGAAGGGAATTCCATATTGCCTGAAAGAA...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCCCAGTCTACTATCTaGCCTGTTTTGGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASSQSTI*PVLESG
Trigger: ACCACTTTCCAAAACAGGCCAGATAGTAGACTGGGA...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAAAGATCAAAGTAACATaGCATTTTCCCTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLKIKVT*HFPLLG
Trigger: GCCAAGCAAGGGAAAATGCCATGTTACTTTGATCTT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTGGGTTTCACAATTTaGTTCACAGCTGTGATTCAT +
Preference number: 4 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPALGFTI*FTAVIH
Trigger: ATGAATCACAGCTGTGAACCAAATTGTGAAACCCAA...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGTTCACAGTCCATTTTTaGGTTTCACAATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMFTVHF*VSQFGS
Trigger: TGAACCAAATTGTGAAACCCAAAAATGGACTGTGAA...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCGGTAACCCCGGCAATTaGCTGATCCGCAGAAACATT +
Preference number: 4 (lower is better)
Translates to: VRVQALDDELGHLFSEYFGNPGN*LIRRNI
Trigger: AATGTTTCTGCGGATCAGCCAATTGCCGGGGTTACC...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTTGCCTTCTAGCTCACTaGTTGCATCAGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: GSSSFVPLLSLGSISASACLLAH*LHQRLH
Trigger: GTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCA...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTATGCCGTTGCTCTCTTTaGGCTCTATTTCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALCRCSL*ALFQRQ
Trigger: CTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCA...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGAAACTGTCCAGGAGTTTaGTGGCCAAATCACTTATAT +
Preference number: 4 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRNCPGV*WPNHLY
Trigger: ATATAAGTGATTTGGCCACCAAACTCCTGGACAGTT...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTACATGGGATAACCTGGTaGGTAACCAGCAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALHGITW*VTSKGM
Trigger: CATCCCTTTGCTGGTTACCCACCAGGTTATCCCATG...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGAGCAGGAGAACACACTaGGTCCATGCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVSRRTH*VHAGCG
Trigger: CCCACACCCAGCATGGACCCAGTGTGTTCTCCTGCT...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGGAGCTGCCACATGTaGCACCACTGGTACTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGRSCHM*HHWYWW
Trigger: CCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCT...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGACTACACCATCACTCTaGGCCACATACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQTTPSL*ATYWEL
Trigger: CAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGT...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAACTACACCATCACTCTaGGCCACATACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALTTPSL*ATYWEL
Trigger: CAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCGCAAGACAGCAACGCTaGAGTCTTGGTGTACTACAC +
Preference number: 4 (lower is better)
Translates to: VRVQALDDELGHLFSEYFARQQR*SLGVLH
Trigger: GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGC...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTGATATACTGAAGACTTaGCTGGGCATAACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: ALPSRSTTKTAHDVPERTDILKT*LGITLY
Trigger: GTACAGAGTTATGCCCAGCCAAGTCTTCAGTATATC...AGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp TGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTTCAGTACCACCACTCCTTGTaGATGAGCTGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: CHPDPQQRQPMTFQKGLQYHHSL*MSCENL
Trigger: CAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTA...CTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACCACAACCATTTCAGATaGCTGCAAGGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHHNHFR*LQGLRL
Trigger: CAGCCTCAGCCCTTGCAGCCATCTGAAATGGTTGTG...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGTCTTTGCTAGTTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLSLLVH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAACTAGCAAAGA...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCATCTTTGCTAGTTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQASLLVH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAACTAGCAAAGA...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACACTGGACGATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTG...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACGAGTGGAGTCAGGTCTaGCCAGGGTCTTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHEWSQV*PGSFLS
Trigger: GCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTAACATAGCACAAGGCTaGCCAAAACCACAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLNIAQG*PKPQGS
Trigger: GCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTT...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp ACCATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCCCGTCGCTCTCTTTCTaGTCTACATCGGGAAGATAC +
Preference number: 4 (lower is better)
Translates to: TIFLFLHRMHARFSFFFSPSLSF*STSGRY
Trigger: GTATCTTCCCGATGTAGATCAGAAAGAGAGCGACGG...GCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR TCA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTTGGGTATAGGTTTTaGAAGGGTAGATTTATAACG +
Preference number: 4 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENLGYRF*KGRFIT
Trigger: CGTTATAAATCTACCCTTTCAAAACCTATACCCAAG...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATGAATTCCCTTCTTCTTaGGCCTCTTGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHEFPSS*ASCKHF
Trigger: GAAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTC...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAAGAAAATACAACTTCTaGGTCATCAGAAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLRKYNF*VIRSMH
Trigger: GTGCATACTTCTGATGACTCAGAAGTTGTATTTTCT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAATACAAATGTCTCCTTaGCTCCAATCTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIIQMSP*LQSLIF
Trigger: GAAGATGAGAGATTGGAGTCAAGGAGACATTTGTAT...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAGATTTCACATCTGTATaGCTTGTACTATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIDFTSV*LVLSTP
Trigger: TGGGGTTGATAGTACAAGTCATACAGATGTGAAATC...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATCCTCTGAATTTGGGTaGCCCAGAGGGTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQSSEFG*PRGSDF
Trigger: GAAATCTGACCCTCTGGGTCACCCAAATTCAGAGGA...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGCTACTGTCAGGTTGCTaGTACGTGGTAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQLLSGC*YVVEGF
Trigger: AAAGCCTTCTACCACGTATCAGCAACCTGACAGTAG...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGTTTATCGGACTGGTCTaGAAAATGGGATCCATCCTG +
Preference number: 4 (lower is better)
Translates to: VYHICHLAFLFPAHRQKRFIGLV*KMGSIL
Trigger: CAGGATGGATCCCATTTTTCAGACCAGTCCGATAAA...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTTCAGGTGCTTGCACTaGCCCCTTGTCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDFRCLH*PLVFLK
Trigger: CTTCAGAAAGACAAGGGGTCAGTGCAAGCACCTGAA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTACTTTCTTTCTGTCCTaGAGCTCACCATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVTFFLS*SSPSLS
Trigger: TGAAAGTGATGGTGAGCTTCAGGACAGAAAGAAAGT...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGCATGCTATTTCACCTTaGGCTCTTTCATCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLHAISP*ALSSLE
Trigger: TTCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATG...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTTTTGGTTCACAGCTGTaGTTCATGAAACGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCACAGCTGTGAACCAAA...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCTTAAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: VFSLEYPSPSLNGGTAVLNKDSP*RSRKDF
Trigger: GAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTT...TAAGACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLVLSGV*ARDVFS
Trigger: TGAGAATACATCGCGTGCTCATACACCACTCAACAC...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp ACCATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCCAGGTGTTTGATCTCTaGAGCCAACAGCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: TIFLFLHRMHARFSFFFSQVFDL*SQQHPF
Trigger: GAAGGGATGCTGTTGGCTTCAGAGATCAAACACCTG...GCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTTCGGGGCAGGTGTTTaGTCTCTGAAGCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMFGAGV*SLKPTA
Trigger: TGCTGTTGGCTTCAGAGATCAAACACCTGCCCCGAA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACCTTAGAATATGTTCAGTAGCACAGTGCTaGCAGGGGTGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPRSVATVHILTLHLRICSVAQC*QGWDRK
Trigger: CTTTCTGTCCCACCCCTGTCAGCACTGTGCTACTGA...ACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGCCCAATTCCACCCTTaGCTTTGGTGGGGAAGATTC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMAQFHP*LWWGRF
Trigger: GAATCTTCCCCACCAAAGTCAAGGGTGGAATTGGGC...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR GCA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGGTCAGAACTCTCTCGTaGTCTGTTATCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: VYHICHLAFLFPAHRQKRVRTLS*SVICVW
Trigger: CCATACACAGATAACAGAGCACGAGAGAGTTCTGAC...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATACACAAAGAAGGGTTaGTATCGTTCAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLYTKKG*YRSKYS
Trigger: ACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGTGCTACCGATGCTCTaGTTATATTCTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCVLPML*LYSSHA
Trigger: TGCATGTGAAGAATATAAGCAGAGCATCGGTAGCAC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAAGGTTTCTTGGAATACTaGTATCATCCGAATCTGTAT +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWEGFLEY*YHPNLY
Trigger: ATACAGATTCGGATGATAGCAGTATTCCAAGAAACC...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGGCAGCTCTTCTTGCTaGCTAGAAGGTATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALGSSSC*LEGILA
Trigger: AGCCAAAATACCTTCTAGGCAGCAAGAAGAGCTGCC...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTATTGGCAGCTCTTCTTaGTGCCTAGAAGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCIGSSS*CLEGIL
Trigger: CAAAATACCTTCTAGGCAGCAAGAAGAGCTGCCAAT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATATGACTTCCACATCTaGATGCTGTTTTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLYDFHI*MLFSLK
Trigger: TTTCAGAGAAAACAGCATGCAGATGTGGAAGTCATA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTCTAGTTTTGTGCCGTTaGTCTCTTTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: RFPVRVQALDDELGHLFSLVLCR*SLWALF
Trigger: AAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAG...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACAACTATTGTAGTCACTaGTGCGGCTGGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHNYCSH*CGWLYH
Trigger: GTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTT...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTATCCATCTCAGCTTCATaGTCAAGGCTGGCATCATCT +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALSISAS*SRLASS
Trigger: AGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGA...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSFTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATACAGCCCCAAACTTCTaGATGTACTTCTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDTAPNF*MYFLMY
Trigger: GTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGT...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTCCTTCAGTTGACATCTaGAGGGTTGAATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: MLVSLSTLHSGSCCGSSCPSVDI*RVEFPR
Trigger: CCTGGGGAATTCAACCCTGCAGATGTCAACTGAAGG...ACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACATGAAACCTGTTTTCTaGACATTTTCAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHMKPVF*TFSIFA
Trigger: GGCAAAGATTGAAAATGTGCAGAAAACAGGTTTCAT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTGCTGCATGAGTAGGTaGAGATGCTACTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSCCMSR*RCYCCG
Trigger: ACCACAGCAGTAGCATCTCCACCTACTCATGCAGCA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTATGTTATTGGTGTATGTaGCAAGGCCACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALCYWCM*QGHWLC
Trigger: ACAGAGCCAGTGGCCTTGCCACATACACCAATAACA...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATTCTTTCAGGCAATATaGAATTCCCTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLFFQAI*NSLLLE
Trigger: CTCAAGAAGAAGGGAATTCCATATTGCCTGAAAGAA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAGAGAGACCCTCACCATTTTCCATCAGAGCTTCTAGCTCTCCATCCACTGAATCTGGAGACGGTTTCTTaGAATACTGCTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: QRDPHHFPSELLALHPLNLETVS*NTAIIR
Trigger: TCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAG...ATTCAGTGGATGGAGAGCTAGAAGCTCTGATGGAAAATGGTGAGGGTCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp TGTGCTCAGCTTGGTGGAAGGATCAGGTGTGTTGAGTGGTGTATGAGCACGCGATTGGGTTTCACAATTTaGTTCACAGCTGTGATTCAT +
Preference number: 4 (lower is better)
Translates to: CAQLGGRIRCVEWCMSTRLGFTI*FTAVIH
Trigger: ATGAATCACAGCTGTGAACCAAATTGTGAAACCCAA...TCGCGTGCTCATACACCACTCAACACACCTGATCCTTCCACCAAGCTGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCGGTAACCCCGGCAATTaGCTGATCCGCAGAAACATT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSGNPGN*LIRRNI
Trigger: AATGTTTCTGCGGATCAGCCAATTGCCGGGGTTACC...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCCTTCTGTGCTCAGCTTaGTGGAAGGATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSLLCSA*WKDQVC
Trigger: ACACACCTGATCCTTCCACCAAGCTGAGCACAGAAG...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACCTTCTGTGCTCAGCTTaGTGGAAGGATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHLLCSA*WKDQVC
Trigger: ACACACCTGATCCTTCCACCAAGCTGAGCACAGAAG...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTCTTCATCTTGGGATaGTGTTTCTTCATTAATAGG +
Preference number: 4 (lower is better)
Translates to: ATLESWCTTPSLWATYWELFILG*CFFINR
Trigger: CCTATTAATGAAGAAACACCATCCCAAGATGAAGAG...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAATCCACTGTTTTATCTaGCTGTTCTTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASIHCFI*LFLAPF
Trigger: GAAAGGAGCCAAGAACAGCCAGATAAAACAGTGGAT...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTCAGTCACTGCTGCGGCTaGCTGTACCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLLSSNIFLVGMGKCSKVSHCCG*LYHHSL
Trigger: CAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT...GACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCGAGCTGTCTTCCAGTTaGGAGGTAAGACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGELSSS*EVRQWF
Trigger: AAACCATTGTCTTACCTCCCAACTGGAAGACAGCTC...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTGTTTTCATCATATGTTaGAGTTCCCAGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVAVFIIC*SSQVHL
Trigger: GAGATGGACCTGGGAACTCCAACATATGATGAAAAC...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACTGGAGTTCATTTTTGTaGCCTTCAGTTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHWSSFL*PSVDIC
Trigger: GCAGATGTCAACTGAAGGCCACAAAAATGAACTCCA...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 72 bp ACATTAAAATATAATACAGATCATCAGGGTAAAGGGTaGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGAC +
Preference number: 4 (lower is better)
Translates to: TLKYNTDHQGKG*WVGMRMGLCAD
Trigger: GTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGATCTTCATCAGATTCTaGACCAAGAAAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQIFIRF*TKKDAF
Trigger: GAAGGCATCTTTCTTGGTTCAGAATCTGATGAAGAT...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTTGGGTATAGGTTTTaGAAGGGTAGATTTATAACG +
Preference number: 4 (lower is better)
Translates to: SSHFAVRFPVRVQALDDELGYRF*KGRFIT
Trigger: CGTTATAAATCTACCCTTTCAAAACCTATACCCAAG...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCATGATTAACAGAAGCTaGACTAGTGCTACCGATGCT +
Preference number: 4 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVMINRS*TSATDA
Trigger: AGCATCGGTAGCACTAGTTCAGCTTCTGTTAATCAT...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAAGCAAATCCCTTTCCTaGATCAGGAAGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVSKSLS*IRKVTT
Trigger: GGTAGTGACCTTCCTGATTCAGGAAAGGGATTTGCT...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAGAATTCCCTTCTTCTTaGGCCTCTTGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQAEFPSS*ASCKHF
Trigger: GAAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTC...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATAGAAAATACAACTTCTaGGTCATCAGAAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDRKYNF*VIRSMH
Trigger: GTGCATACTTCTGATGACTCAGAAGTTGTATTTTCT...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTATACAAATGTCTCCTTaGCTCCAATCTCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVAIQMSP*LQSLIF
Trigger: GAAGATGAGAGATTGGAGTCAAGGAGACATTTGTAT...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAGATTTCACATCTGTATaGCTTGTACTATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: SYVGVPRSISASCSRLASDFTSV*LVLSTP
Trigger: TGGGGTTGATAGTACAAGTCATACAGATGTGAAATC...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGGTAGAAGGCTTTTCTTaGGAGAAGTCCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQVEGFS*EKSQPK
Trigger: CTTAGGTTGGGACTTCTCTCAAGAAAAGCCTTCTAC...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGGATCCATCCTGTTaGTCCCAATTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQWDPSC*SQFSSS
Trigger: AGAAGAGGAGAATTGGGATCAACAGGATGGATCCCA...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTGAGTGGCATCTATTATaGAGGAAGGTCTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MLVSLSTLHSGSCCGSSCEWHLL*RKVFGS
Trigger: GCTGCCAAAGACCTTCCTTCATAATAGATGCCACTC...ACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTTTGGTTCACAGCTGTaGTTCATGAAACGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCACAGCTGTGAACCAAA...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACCTTAGAATATGTAAGGATCAGGTGTGTTaGGTGGTGTATGAGCACGCG +
Preference number: 4 (lower is better)
Translates to: LPRSVATVHILTLHLRICKDQVC*VVYEHA
Trigger: CGCGTGCTCATACACCACTCAACACACCTGATCCTT...ACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR TCA 90 bp CTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACCTTAGAATATGTGTCATAGGGCAGTGGTaGTGTCATTCCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LPRSVATVHILTLHLRICVIGQW*CHSQVL
Trigger: CAGAACCTGGGAATGACATCACCACTGCCCTATGAC...ACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR TCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAACTGCTGCTGTACACTaGCAGACTGTTGGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALTAAVH*QTVGLN
Trigger: ATTCAAACCAACAGTCTGTCAGTGTACAGCAGCAGT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATACCACTCCTTGTGGATaGGCTGTGAAAATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDTTPCG*AVKICC
Trigger: GCAACAGATTTTCACAGCTCATCCACAAGGAGTGGT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTACTGAGTCTGCCTTGTaGTCACATGGTAGTAATAAA +
Preference number: 4 (lower is better)
Translates to: QESHRAVVMSFPGSASVATESAL*SHGSNK
Trigger: TTTATTACTACCATGTGATCACAAGGCAGACTCAGT...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCTGAACCAAGAAAGATaGCTTCAGATTGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHLNQER*LQIVRI
Trigger: AATCCTCACAATCTGAAGGCATCTTTCTTGGTTCAG...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGAAGCACTACTGTCATaGTTAGAATATGATGACCCT +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCEALLS*LEYDDP
Trigger: AGGGTCATCATATTCTAAGCATGACAGTAGTGCTTC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACTTTGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAATTCTTCCTGCCAAATCAGATTCTaGCCCAGGAGATCCATTTAT +
Preference number: 4 (lower is better)
Translates to: TLHSGSCCGSSCCDCNSSCQIRF*PRRSIY
Trigger: ATAAATGGATCTCCTGGGGCAGAATCTGATTTGGCA...GGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTAGAAGTGCAAAATGTTaGCAAATCAGATTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSSSFVPLLSLGSISASARSAKC*QIRFCP
Trigger: GGGGCAGAATCTGATTTGGCAACATTTTGCACTTCT...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp TGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAATTCTTCCTCTTCTTTCTGACTTCTTATaGAGCATGCAGGTATCATCC +
Preference number: 4 (lower is better)
Translates to: CIQAAVVGVAVVTAILPLLSDFL*SMQVSS
Trigger: GGATGATACCTGCATGCTGCATAAGAAGTCAGAAAG...AAGAGGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTTTCTGACTTCTTATaGAGCATGCAGGTATCATCC +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQALSDFL*SMQVSS
Trigger: GGATGATACCTGCATGCTGCATAAGAAGTCAGAAAG...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAGTTTCTTTCCCTGCATaGTTTAAAAACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLVSFPA*FKNSEL
Trigger: AAGTTCAGAGTTTTTAAAGCATGCAGGGAAAGAAAC...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGTTTCTTTCCCTGCATaGTTTAAAAACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCVSFPA*FKNSEL
Trigger: AAGTTCAGAGTTTTTAAAGCATGCAGGGAAAGAAAC...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGTCTATAACTTTGACTaGTCCGAGAAGAACAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLVYNFD*SEKNKD
Trigger: GTCCTTGTTCTTCTCGGAGCAGTCAAAGTTATAGAC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCGGTGTACACTCACACTaGATTCGCTTAATATCTCGA +
Preference number: 4 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVGVHSH*IRLISR
Trigger: TCGAGATATTAAGCGAATGCAGTGTGAGTGTACACC...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCCTTCATTTTCCCTCCTaGTGCTCTGATGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSLHFPS*CSDADS
Trigger: AGAGTCAGCATCAGAGCAGCAGGAGGGAAAATGAAG...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACTTCATTTTCCCTCCTaGTGCTCTGATGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVLHFPS*CSDADS
Trigger: AGAGTCAGCATCAGAGCAGCAGGAGGGAAAATGAAG...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTAGTAGCTGTTGTGACTaGAATTCTTCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSSFVPLLSLGSISASASSCCD*NSSSSS
Trigger: AGAGGAAGAGGAAGAATTGCAGTCACAACAGCTACT...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp AAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTTGATAATATATGGTTaGTTGAGACTGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KTATLESWCTTPSLWATYLIIYG*LRLCRR
Trigger: TCTCCTGCACAGTCTCAAGCAACCATATATTATCAA...GTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCTTTTCATTGCCAAGTaGAGTGAGAAACCTATTCTG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCLFIAK*SEKPIL
Trigger: CAGAATAGGTTTCTCACTGCACTTGGCAATGAAAAG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTGTTATTGGTGTATGTaGCAAGGCCACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSCYWCM*QGHWLC
Trigger: ACAGAGCCAGTGGCCTTGCCACATACACCAATAACA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CCA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTACAACCACAACAGACTaGAGACGGTTTCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: GSSSFVPLLSLGSISASATTTTD*RRFLGI
Trigger: TATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGT...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTTTCTTCTTTCTGATATaGTTTGGCTGTTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: GSSSFVPLLSLGSISASAFFFLI*FGCFPT
Trigger: GGTGGGGAAACAGCCAAACCATATCAGAAAGAAGAA...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTCCAGCGTTGAATAATTaGAAGTACTTTGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RFPVRVQALDDELGHLFSPALNN*KYFAFL
Trigger: GAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGG...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTGCCGTTGCTCTCTTTaGGCTCTATTTCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMCRCSL*ALFQRQ
Trigger: CTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGCAAGACAGCAACGCTaGAGTCTTGGTGTACTACAC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMARQQR*SLGVLH
Trigger: GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGC...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAGCTGTCTTCCAGTTaGGAGGTAAGACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALELSSS*EVRQWF
Trigger: AAACCATTGTCTTACCTCCCAACTGGAAGACAGCTC...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTCTTTGCTAGTTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDSLLVH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAACTAGCAAAGA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCATGGAGTTCATTTTTGTaGCCTTCAGTTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQAWSSFL*PSVDIC
Trigger: GCAGATGTCAACTGAAGGCCACAAAAATGAACTCCA...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTGAGTGGAGTCAGGTCTaGCCAGGGTCTTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFEWSQV*PGSFLS
Trigger: GCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 72 bp CAACGGAGGGACAGCAGTCTTAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTTGCTTTCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: QRRDSSLSLRPA*NNWKYFAFLQH
Trigger: ATGTTGGAGGAAAGCAAAGTACTTCCAATTATTCAACGCTGGTCTCAGACTAAGACTGCTGTCCCTCCGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 72 bp GACTTGGCTGGGCATAACTCTGTACAATTGGTGGAGTaGTCTGTGAATAAGGTGATGTCACACCATAGACTG +
Preference number: 4 (lower is better)
Translates to: DLAGHNSVQLVE*SVNKVMSHHRL
Trigger: CAGTCTATGGTGTGACATCACCTTATTCACAGACAACTCCACCAATTGTACAGAGTTATGCCCAGCCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGATGCCTTCAGATTGTaGGGATTTCTTCTTAGAACC +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALDAFRL*GFLLRT
Trigger: GGTTCTAAGAAGAAATCCTCACAATCTGAAGGCATC...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGTCTAAATGGGCTTTCTaGCTTCTTATGCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQSKWAF*LLMQHA
Trigger: TGCATGCTGCATAAGAAGTCAGAAAGCCCATTTAGA...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACAGTACAGTATATGTCTaGATCTTTGGTTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHSTVYV*IFGFAA
Trigger: TGCTGCAAAACCAAAGATTCAGACATATACTGTACT...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACAGCAAATCCCTTTCCTaGATCAGGAAGGTCACTACC +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNSKSLS*IRKVTT
Trigger: GGTAGTGACCTTCCTGATTCAGGAAAGGGATTTGCT...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATACAATTTCTGGGGCATaGCCACTACTGTCACACTTT +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDTISGA*PLLSHF
Trigger: AAAGTGTGACAGTAGTGGTCATGCCCCAGAAATTGT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTTCAGGTGCTTGCACTaGCCCCTTGTCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFFRCLH*PLVFLK
Trigger: CTTCAGAAAGACAAGGGGTCAGTGCAAGCACCTGAA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCATGCTATTTCACCTTaGGCTCTTTCATCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCHAISP*ALSSLE
Trigger: TTCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACATCAGACACACCCTCCTCTTCATCTTGGGATGGTGTTTCTTCATTAATAGGTGAGTGGCATCTATTATaGAGGAAGGTCTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TSDTPSSSSWDGVSSLIGEWHLL*RKVFGS
Trigger: GCTGCCAAAGACCTTCCTTCATAATAGATGCCACTC...ACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCCTTCAGGCAGGACTGTaGGTGTGTGTTCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGLQAGL*VCVLYE
Trigger: CTCATACAGAACACACACTCACAGTCCTGCCTGAAG...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGAACAAAGACAGCCCATaGCGTTCCAGAAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMNKDSP*RSRKDF
Trigger: GAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTT...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACGTGTTGAGTGGTGTATaGGCACGCGATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNVLSGV*ARDVFS
Trigger: TGAGAATACATCGCGTGCTCATACACCACTCAACAC...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGGGACATTTTCTAATTaGTCAAGATCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLGTFSN*SRSSLP
Trigger: TGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACCATTCTTCAGGGCCATaGAATAGTAATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHHSSGP*NSNGCF
Trigger: AAAACATCCATTACTATTTCATGGCCCTGAAGAATG...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR GCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTGCCAAATCAGATTCTaGCCCAGGAGATCCATTTAT +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLCQIRF*PRRSIY
Trigger: ATAAATGGATCTCCTGGGGCAGAATCTGATTTGGCA...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAAGAAGTGCAAAATGTTaGCAAATCAGATTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALRSAKC*QIRFCP
Trigger: GGGGCAGAATCTGATTTGGCAACATTTTGCACTTCT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAGAAGTGCAAAATGTTaGCAAATCAGATTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQRSAKC*QIRFCP
Trigger: GGGGCAGAATCTGATTTGGCAACATTTTGCACTTCT...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCCTGAATCTTTGGTTTTaGAGCAAGAAACCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGLNLWF*SKKPSY
Trigger: ATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAG...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTATTGGCAGCTCTTCTTaGTGCCTAGAAGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLIGSSS*CLEGIL
Trigger: CAAAATACCTTCTAGGCAGCAAGAAGAGCTGCCAAT...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCCTTATTTCAGGTGCTTaGACTGACCCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSLISGA*TDPLSF
Trigger: GAAAGACAAGGGGTCAGTGCAAGCACCTGAAATAAG...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCCTTATTTCAGGTGCTTaGACTGACCCCTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFLISGA*TDPLSF
Trigger: GAAAGACAAGGGGTCAGTGCAAGCACCTGAAATAAG...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCATTCCTCTTTTTCTCTTaGCACCACCATGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQAFLFFS*HHHVRS
Trigger: ACTTCTTACATGGTGGTGGCAAGAGAAAAAGAGGAA...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR GCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGACAATCTTCCCCACATaGTATTTCACCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQTIFPT*YFTLSS
Trigger: AGAGCTCAAGGTGAAATAGCATGTGGGGAAGATTGT...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACCATTTTCCCTCCTGCTaGTCTGATGCTGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNHFPSC*SDADSV
Trigger: AACAGAGTCAGCATCAGAGCAGCAGGAGGGAAAATG...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAAGATCAAGATCCTCTTTaGCATCCTTGCCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQDQDPL*HPCLLA
Trigger: AGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATC...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTCTAGTTTTGTGCCGTTaGTCTCTTTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: VFIICWSSQVHLSFMLKALVLCR*SLWALF
Trigger: AAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAG...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAGTTCTTCTAGTTTTGTaGCGTTGCTCTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVVLLVL*RCSLWA
Trigger: AGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAAC...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCACAGCCCCAAACTTCTaGATGTACTTCTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVTAPNF*MYFLMY
Trigger: GTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGT...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATGACATGAGTTTATCTTaGTGTGGTGACACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDDMSLS*CGDTRG
Trigger: ACCTCTGGTGTCACCACACCAAGATAAACTCATGTC...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTATATGTCTGAATCTTTaGTTTTGCAGCAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: RFPVRVQALDDELGHLFSICLNL*FCSKKP
Trigger: GGGTTTCTTGCTGCAAAACCAAAGATTCAGACATAT...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACGTCCACCTTTATTCCTaGTGGAAGACTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHVHLYS*WKTLKR
Trigger: TCTCTTCAGAGTCTTCCACCAGGAATAAAGGTGGAC...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGCACTGCATCCAGAACTaGAGATGTGTTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVHCIQN*RCVLSA
Trigger: TGCGGAGAGAACACATCTCCAGTTCTGGATGCAGTG...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTTTCTTTCAGGCAATATaGAATTCCCTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCFFQAI*NSLLLE
Trigger: CTCAAGAAGAAGGGAATTCCATATTGCCTGAAAGAA...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATCTGGAGACGGTTTCTTaGAATACTGCTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDLETVS*NTAIIR
Trigger: TCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAG...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACTGGAGACGGTTTCTTaGAATACTGCTATCATCCGA +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVLETVS*NTAIIR
Trigger: TCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAG...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGCAAAGTAGAATTCTTTaGCACAACCACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQQSRIL*HNHNRL
Trigger: CAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTG...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATAGAAATTTATCGGACTaGTCTGAAAAATGGGATCCA +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHRNLSD*SEKWDP
Trigger: TGGATCCCATTTTTCAGACCAGTCCGATAAATTTCT...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATTCTGAAACCGTCTATTaGAACAATAATCCCCATTTG +
Preference number: 4 (lower is better)
Translates to: HHMLEFPGPSQLHAQGWHSETVY*NNNPHL
Trigger: CAAATGGGGATTATTGTTCCAATAGACGGTTTCAGA...ATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTGCCTTCTAGCTCACTaGTTGCATCAGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMCLLAH*LHQRLH
Trigger: GTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTTGCCGTTGCTCTCTTTaGGCTCTATTTCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: SLLASMLVSLSTLHSGSCCRCSL*ALFQRQ
Trigger: CTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCA...ACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACCTCTTCATCTTGGGATaGTGTTTCTTCATTAATAGG +
Preference number: 4 (lower is better)
Translates to: LVYYTITLGHILGTGNFHLFILG*CFFINR
Trigger: CCTATTAATGAAGAAACACCATCCCAAGATGAAGAG...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCTCTTCATCTTGGGATaGTGTTTCTTCATTAATAGG +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCLFILG*CFFINR
Trigger: CCTATTAATGAAGAAACACCATCCCAAGATGAAGAG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGTTTTCGAGGCCTTCATaGGGTTTTCATCATATGTTG +
Preference number: 4 (lower is better)
Translates to: VYHICHLAFLFPAHRQKRFSRPS*GFHHML
Trigger: CAACATATGATGAAAACCCCATGAAGGCCTCGAAAA...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGTGTCCTCTTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATCTGCTTCTGCTGTCTTaGGCTTTTTCGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVLFGFVNSPKLLHVLLNLLLLS*AFSRPS
Trigger: TGAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAG...ATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAAGAGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTGAGTGGAGTCAGGTCTaGCCAGGGTCTTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLEWSQV*PGSFLS
Trigger: GCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 72 bp CAAATCACTTATATCCACTGTTTTATCTGGCTGTTCTaGGCTCCTTTCACTCTCCACATCAGACACACCCTC +
Preference number: 4 (lower is better)
Translates to: QITYIHCFIWLF*APFTLHIRHTL
Trigger: GAGGGTGTGTCTGATGTGGAGAGTGAAAGGAGCCAAGAACAGCCAGATAAAACAGTGGATATAAGTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 72 bp TGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTaGAGACTGTGCAGGAGAGTACTGCTGCTGTACACT +
Preference number: 4 (lower is better)
Translates to: CWTCLSLIIYGC*RLCRRVLLLYT
Trigger: AGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
3UTR CAA 72 bp AGACTGTTGGACATGTCTGTCCTTGATAATATATGGTaGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RLLDMSVLDNIW*LETVQESTAAV
Trigger: TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTTTGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAATTCTTCCAAATCATGTGATCTTTaGCTTGAAGAAGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: TLHSGSCCGSSCCDCNSSKSCDL*LEEVRT
Trigger: TGTACGGACTTCTTCAAGTCAAAGATCACATGATTT...GGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTTTATCTTGGTGTGGTaGCACCAGAGGTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMFILVW*HQRFCF
Trigger: GAAACAGAACCTCTGGTGTCACCACACCAAGATAAA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAGAGAGACCCTCACCATTTTCCATCAGAGCTTCTAGCTCTCCATCCACTGAATAGAAAATACAACTTCTaGGTCATCAGAAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: QRDPHHFPSELLALHPLNRKYNF*VIRSMH
Trigger: GTGCATACTTCTGATGACTCAGAAGTTGTATTTTCT...ATTCAGTGGATGGAGAGCTAGAAGCTCTGATGGAAAATGGTGAGGGTCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCTGTTCTGCATTTTGCTaGTACTTGTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFCSAFC*YLCPPQ
Trigger: TTGTGGTGGACACAAGTATCAGCAAAATGCAGAACA...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTCTGGTACTTGTCCTTaGGTTCGATCATACACAACC +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMSGTCP*VRSYTT
Trigger: GGTTGTGTATGATCGAACTCAAGGACAAGTACCAGA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTTTATCGGACTGGTCTaGAAAATGGGATCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMFIGLV*KMGSIL
Trigger: CAGGATGGATCCCATTTTTCAGACCAGTCCGATAAA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTTGGGTCTCTCTCTCTTaGCCTATTAGGAGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLWVSLS*PIRSLR
Trigger: CCGAAGACTCCTAATAGGTCAAGAGAGAGAGACCCA...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCACCACTCCTTGTGGATaGGCTGTGAAAATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGTTPCG*AVKICC
Trigger: GCAACAGATTTTCACAGCTCATCCACAAGGAGTGGT...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTTCAGGCACTGGACGATaGACTGGGACATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLSGTGR*TGTSLF
Trigger: GAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGA...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTTCAGTAGCACAGTGCTaGCAGGGGTGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPSVAQC*QGWDRK
Trigger: CTTTCTGTCCCACCCCTGTCAGCACTGTGCTACTGA...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGGAGCAATTTCCTTTTTaGGTGGCATCTATTATCTCA +
Preference number: 4 (lower is better)
Translates to: VYHICHLAFLFPAHRQKREQFPF*VASIIS
Trigger: TGAGATAATAGATGCCACTCAAAAAGGAAATTGCTC...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR GCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGCTGAATCTTTGGTTTTaGAGCAAGAAACCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQLNLWF*SKKPSY
Trigger: ATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAG...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATGTCTATAACTTTGACTaGTCCGAGAAGAACAAGGAC +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDVYNFD*SEKNKD
Trigger: GTCCTTGTTCTTCTCGGAGCAGTCAAAGTTATAGAC...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGATCAAGATCCTCTTTaGCATCCTTGCCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMDQDPL*HPCLLA
Trigger: AGCTAGAAGGCAAGGATGGCAAAGAGGATCTTGATC...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACGTCATTCCCAGGTTCTaGATCTGTTGCTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNVIPRF*ICCCCF
Trigger: GAAACAACAGCAACAGATGCAGAACCTGGGAATGAC...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCATTGATAATATATGGTTaGTTGAGACTGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQALIIYG*LRLCRR
Trigger: TCTCCTGCACAGTCTCAAGCAACCATATATTATCAA...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ACATCAGACACACCCTCCTCTTCATCTTGGGATGGTGTTTCTTCATTAATAGGTGTTTCACATTCTCATTaGACTCCAGGTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TSDTPSSSSWDGVSSLIGVSHSH*TPGPQD
Trigger: ATCCTGAGGACCTGGAGTGCAATGAGAATGTGAAAC...ACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTTGGCTTCTAACCACATaGCAACAGCTCACAACTAGG +
Preference number: 4 (lower is better)
Translates to: SLLASMLVSLSTLHSGSCWLLTT*QQLTTR
Trigger: CCTAGTTGTGAGCTGTTGGCATGTGGTTAGAAGCCA...ACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCCCTTCCTCGTTCAGTTaGAACAGTTCATATTCTGAC +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFPSSFS*NSSYSD
Trigger: GTCAGAATATGAACTGTTGCAACTGAACGAGGAAGG...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR CCA 90 bp CTTCCTCGTTCAGTTGCAACAGTTCATATTCTGACTCTGCACCTTAGAATATGTTCTGTTATCTGTGTATaGCCGAGAATAGCGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LPRSVATVHILTLHLRICSVICV*PRIARP
Trigger: AGGACGCGCTATTCTCGGCCATACACAGATAACAGA...ACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATACAACCACAACAGACTaGAGACGGTTTCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDTTTTD*RRFLGI
Trigger: TATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAACAATAATCCCCATTTaGACACCGAGAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALTIIPI*TPRRTF
Trigger: GAATGTTCTTCTCGGTGTCCAAATGGGGATTATTGT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTTTCACAGTCCATTTTTaGGTTTCACAATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCFTVHF*VSQFGS
Trigger: TGAACCAAATTGTGAAACCCAAAAATGGACTGTGAA...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCATCCACTGTTTTATCTaGCTGTTCTTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSIHCFI*LFLAPF
Trigger: GAAAGGAGCCAAGAACAGCCAGATAAAACAGTGGAT...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCGATATACTGAAGACTTaGCTGGGCATAACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSDILKT*LGITLY
Trigger: GTACAGAGTTATGCCCAGCCAAGTCTTCAGTATATC...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCTAGGTTCTCGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTGAGAAAAGGAGAGCTGTCTTCCAGTTaGGAGGTAAGACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: ARFSFFFSTKLEMELRKGELSSS*EVRQWF
Trigger: AAACCATTGTCTTACCTCCCAACTGGAAGACAGCTC...TCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACGAGAACCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR CCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCGTTTTCATCATATGTTaGAGTTCCCAGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFVFIIC*SSQVHL
Trigger: GAGATGGACCTGGGAACTCCAACATATGATGAAAAC...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGTTTTCGAGGCCTTCATaGGGTTTTCATCATATGTTG +
Preference number: 4 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQFSRPS*GFHHML
Trigger: CAACATATGATGAAAACCCCATGAAGGCCTCGAAAA...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGTAATCACTTGTAGATaGAGTTCATTTTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLVITCR*SSFLWP
Trigger: AGGCCACAAAAATGAACTCCATCTACAAGTGATTAC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTTCGAAGGAAGGTCTTTaGCAGCTCTCAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPSKEGL*QLSSPS
Trigger: GCTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCGA...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
3UTR CAA 72 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTaGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLLASMLVSLST*HSGSCCGSSCC
Trigger: ACAACAGCTACTCCCACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 72 bp TTAATAGGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTaGGGCTCTATTTCAGCGTCAGCTTCTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LIGSSSFVPLLS*GSISASASGSD
Trigger: ATCTGAACCAGAAGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACCTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
3UTR CAA 72 bp GCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTaGGTTTTGTGTTTCACATTCTCATTGCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: APNFCMYFLMYS*VLCFTFSLHSR
Trigger: CCTGGAGTGCAATGAGAATGTGAAACACAAAACCAAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATGATGCCTTCAGATTGTaGGGATTTCTTCTTAGAACC +
Preference number: 4 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDDAFRL*GFLLRT
Trigger: GGTTCTAAGAAGAAATCCTCACAATCTGAAGGCATC...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCTTGGGTATAGGTTTTaGAAGGGTAGATTTATAACG +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLLGYRF*KGRFIT
Trigger: CGTTATAAATCTACCCTTTCAAAACCTATACCCAAG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp ACATCAGACACACCCTCCTCTTCATCTTGGGATGGTGTTTCTTCATTAATAGGTTCTAAATGGGCTTTCTaGCTTCTTATGCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: TSDTPSSSSWDGVSSLIGSKWAF*LLMQHA
Trigger: TGCATGCTGCATAAGAAGTCAGAAAGCCCATTTAGA...ACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTCTAAATGGGCTTTCTaGCTTCTTATGCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMSKWAF*LLMQHA
Trigger: TGCATGCTGCATAAGAAGTCAGAAAGCCCATTTAGA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAAAAAACTTATCAGTTTaGGGACAGGCTTTACTTGCT +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALKNLSV*GQALLA
Trigger: AGCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCGATTTCACATCTGTATaGCTTGTACTATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSDFTSV*LVLSTP
Trigger: TGGGGTTGATAGTACAAGTCATACAGATGTGAAATC...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTTTTCACGGTTTCCTCTaGATTTGGGTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSFHGFL*IWVTQR
Trigger: CCTCTGGGTCACCCAAATTCAGAGGAAACCGTGAAA...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTCTGGTACTTGTCCTTaGGTTCGATCATACACAACC +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFSGTCP*VRSYTT
Trigger: GGTTGTGTATGATCGAACTCAAGGACAAGTACCAGA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTTCTGGTACTTGTCCTTaGGTTCGATCATACACAACC +
Preference number: 4 (lower is better)
Translates to: SLLASMLVSLSTLHSGSCSGTCP*VRSYTT
Trigger: GGTTGTGTATGATCGAACTCAAGGACAAGTACCAGA...ACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp AGTGTCCTCTTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATTTTATCGGACTGGTCTaGAAAATGGGATCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SVLFGFVNSPKLLHVLLNFIGLV*KMGSIL
Trigger: CAGGATGGATCCCATTTTTCAGACCAGTCCGATAAA...ATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAAGAGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTGGTTGCATCAGAGATTGCACTGTCCATGCTATTTTCACTTATAATTTTCAGTTCAGGTGCTTGCACTaGCCCCTTGTCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TGCIRDCTVHAIFTYNFQFRCLH*PLVFLK
Trigger: CTTCAGAAAGACAAGGGGTCAGTGCAAGCACCTGAA...CTGAAAATTATAAGTGAAAATAGCATGGACAGTGCAATCTCTGATGCAACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TCAGTCTGCGAAACATTAGTTTCTTGGGAGTGTCTGTGTCAGCTTCTGTGCTCAGAGCAATTTCCTTTTTaGGTGGCATCTATTATGAAG +
Preference number: 4 (lower is better)
Translates to: SVCETLVSWECLCQLLCSEQFPF*VASIMK
Trigger: CTTCATAATAGATGCCACTCAAAAAGGAAATTGCTC...TGAGCACAGAAGCTGACACAGACACTCCCAAGAAACTAATGTTTCGCAGACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTAAGGATCAGGTGTGTTaGGTGGTGTATGAGCACGCG +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPKDQVC*VVYEHA
Trigger: CGCGTGCTCATACACCACTCAACACACCTGATCCTT...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCATTCTTCAGGGCCATaGAATAGTAATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLHSSGP*NSNGCF
Trigger: AAAACATCCATTACTATTTCATGGCCCTGAAGAATG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR GCA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAAGAAGCACTACTGTCATaGTTAGAATATGATGACCCT +
Preference number: 4 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQEALLS*LEYDDP
Trigger: AGGGTCATCATATTCTAAGCATGACAGTAGTGCTTC...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAGAAGCACTACTGTCATaGTTAGAATATGATGACCCT +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVEALLS*LEYDDP
Trigger: AGGGTCATCATATTCTAAGCATGACAGTAGTGCTTC...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCGAAGCACTACTGTCATaGTTAGAATATGATGACCCT +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSEALLS*LEYDDP
Trigger: AGGGTCATCATATTCTAAGCATGACAGTAGTGCTTC...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACGTGCTACCGATGCTCTaGTTATATTCTTCACATGCA +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNVLPML*LYSSHA
Trigger: TGCATGTGAAGAATATAAGCAGAGCATCGGTAGCAC...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGATTGGCAGCTCTTCTTaGTGCCTAGAAGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSIGSSS*CLEGIL
Trigger: CAAAATACCTTCTAGGCAGCAAGAAGAGCTGCCAAT...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTAGCTCTTCTGATGAGTaGAAGCCATCCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLSSSDE*KPSTCG
Trigger: ACCACATGTGGATGGCTTGCACTCATCAGAAGAGCT...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGACAATCTTCCCCACATaGTATTTCACCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMTIFPT*YFTLSS
Trigger: AGAGCTCAAGGTGAAATAGCATGTGGGGAAGATTGT...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTA +
Preference number: 4 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQARQVSF*SKVSIL
Trigger: TAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCT...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTTGATAATATATGGTTaGTTGAGACTGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLLIIYG*LRLCRR
Trigger: TCTCCTGCACAGTCTCAAGCAACCATATATTATCAA...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTGACATGAGTTTATCTTaGTGTGGTGACACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLLASMLVSLSTLHSGSCDMSLS*CGDTRG
Trigger: ACCTCTGGTGTCACCACACCAAGATAAACTCATGTC...ACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGAACCCTCGTATCAACTaGTTCTTTAACTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: VYHICHLAFLFPAHRQKRNPRIN*FFNYCF
Trigger: AAAACAGTAGTTAAAGAACCAGTTGATACGAGGGTT...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCGTCCACCTTTATTCCTaGTGGAAGACTCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGVHLYS*WKTLKR
Trigger: TCTCTTCAGAGTCTTCCACCAGGAATAAAGGTGGAC...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTATTCTTTCAGGCAATATaGAATTCCCTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALFFQAI*NSLLLE
Trigger: CTCAAGAAGAAGGGAATTCCATATTGCCTGAAAGAA...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGTGTAGACACAATTTCTaGGGCATGACCACTACTGTC +
Preference number: 4 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVCRHNF*GMTTTV
Trigger: GACAGTAGTGGTCATGCCCCAGAAATTGTGTCTACA...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCCAAAGTAGAATTCTTTaGCACAACCACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSQSRIL*HNHNRL
Trigger: CAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTG...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCCAAAGTAGAATTCTTTaGCACAACCACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFQSRIL*HNHNRL
Trigger: CAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTG...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATAAGATCAAAGTAACATaGCATTTTCCCTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDKIKVT*HFPLLG
Trigger: GCCAAGCAAGGGAAAATGCCATGTTACTTTGATCTT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCAAGATCAAAGTAACATaGCATTTTCCCTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFKIKVT*HFPLLG
Trigger: GCCAAGCAAGGGAAAATGCCATGTTACTTTGATCTT...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATCCGCAGAAACATTTCTaGGCTTCTTTTCCATATCTC +
Preference number: 4 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDPQKHF*ASFPYL
Trigger: GAGATATGGAAAAGAAGCCCAGAAATGTTTCTGCGG...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTGTCCAGGAGTTTGGTaGCCAAATCACTTATATCCA +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMCPGVW*PNHLYP
Trigger: TGGATATAAGTGATTTGGCCACCAAACTCCTGGACA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTCATGGGATAACCTGGTaGGTAACCAGCAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSHGITW*VTSKGM
Trigger: CATCCCTTTGCTGGTTACCCACCAGGTTATCCCATG...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACGATATACTGAAGACTTaGCTGGGCATAACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNDILKT*LGITLY
Trigger: GTACAGAGTTATGCCCAGCCAAGTCTTCAGTATATC...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGAGAAAAGGAGACACATaGTCAGCTGGTGATGTTAAC +
Preference number: 4 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSRKGDT*SAGDVN
Trigger: GTTAACATCACCAGCTGACCATGTGTCTCCTTTTCT...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431180.5
3UTR CAA 72 bp GTTTCTTCATTAATAGGTTCTTCTAGTTTTGTGCCGTaGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSLIGSSSFVP*LSLGSISASAS
Trigger: AGAAGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACCTATTAATGAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTCCGTCGCTCTCTTTCTaGTCTACATCGGGAAGATAC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPPSLSF*STSGRY
Trigger: GTATCTTCCCGATGTAGATCAGAAAGAGAGCGACGG...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTAAAGCATGCATGCTTTaGCCAAAGGGGATAATTCCG +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLKACML*PKGIIP
Trigger: CGGAATTATCCCCTTTGGTCAAAGCATGCATGCTTT...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACAGAAAATACAACTTCTaGGTCATCAGAAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHRKYNF*VIRSMH
Trigger: GTGCATACTTCTGATGACTCAGAAGTTGTATTTTCT...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATAAAAACTTATCAGTTTaGGGACAGGCTTTACTTGCT +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDKNLSV*GQALLA
Trigger: AGCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGTGTTCTGCATTTTGCTaGTACTTGTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVCSAFC*YLCPPQ
Trigger: TTGTGGTGGACACAAGTATCAGCAAAATGCAGAACA...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTCTTTATCAGCAGCATaGAAACGGACTAATACAGTA +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDSLSAA*KRTNTV
Trigger: TACTGTATTAGTCCGTTTTCATGCTGCTGATAAAGA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR GCA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTATGACTTCCACATCTaGATGCTGTTTTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSYDFHI*MLFSLK
Trigger: TTTCAGAGAAAACAGCATGCAGATGTGGAAGTCATA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTAACTATTGTAGTCACTaGTGCGGCTGGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPNYCSH*CGWLYH
Trigger: GTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTT...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACACAGCCCCAAACTTCTaGATGTACTTCTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNTAPNF*MYFLMY
Trigger: GTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGT...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTGATGTTTTTGTTTCGTaGATACTCCTTCACTCGAGC +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFDVFVS*ILLHSS
Trigger: GCTCGAGTGAAGGAGTATGCACGAAACAAAAACATC...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR CCA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTAACCCTCGTATCAACTaGTTCTTTAACTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: INLINIAQGWPKPQGSLLNPRIN*FFNYCF
Trigger: AAAACAGTAGTTAAAGAACCAGTTGATACGAGGGTT...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATATGTCTGAATCTTTaGTTTTGCAGCAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFICLNL*FCSKKP
Trigger: GGGTTTCTTGCTGCAAAACCAAAGATTCAGACATAT...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTTCCCAGTCTACTATCTaGCCTGTTTTGGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLSQSTI*PVLESG
Trigger: ACCACTTTCCAAAACAGGCCAGATAGTAGACTGGGA...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATACAATAATCCCCATTTaGACACCGAGAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDTIIPI*TPRRTF
Trigger: GAATGTTCTTCTCGGTGTCCAAATGGGGATTATTGT...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTGTCCAGGAGTTTGGTaGCCAAATCACTTATATCCA +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFCPGVW*PNHLYP
Trigger: TGGATATAAGTGATTTGGCCACCAAACTCCTGGACA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATTTTTCGAGGCCTTCATaGGGTTTTCATCATATGTTG +
Preference number: 4 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDFSRPS*GFHHML
Trigger: CAACATATGATGAAAACCCCATGAAGGCCTCGAAAA...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTCACTGGACGATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTG...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTGGAGTTCATTTTTGTaGCCTTCAGTTGACATCTGC +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFWSSFL*PSVDIC
Trigger: GCAGATGTCAACTGAAGGCCACAAAAATGAACTCCA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATGTAATCACTTGTAGATaGAGTTCATTTTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: STRLAKTTRQPALEYLHDVITCR*SSFLWP
Trigger: AGGCCACAAAAATGAACTCCATCTACAAGTGATTAC...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAAGTAATCACTTGTAGATaGAGTTCATTTTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQVITCR*SSFLWP
Trigger: AGGCCACAAAAATGAACTCCATCTACAAGTGATTAC...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp ACTGGTTGCATCAGAGATTGCACTGTCCATGCTATTTTCACTTATAATTTTCAGTTTATCTTGGTGTGGTaGCACCAGAGGTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TGCIRDCTVHAIFTYNFQFILVW*HQRFCF
Trigger: GAAACAGAACCTCTGGTGTCACCACACCAAGATAAA...CTGAAAATTATAAGTGAAAATAGCATGGACAGTGCAATCTCTGATGCAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR TCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGCATGCTATTTCACCTTaGGCTCTTTCATCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMHAISP*ALSSLE
Trigger: TTCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATG...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGGACAGACTGTTGGTTTaGATCCCAAACACTATAATT +
Preference number: 4 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSDRLLV*IPNTII
Trigger: AATTATAGTGTTTGGGATTCAAACCAACAGTCTGTC...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTTGCCAAATCAGATTCTaGCCCAGGAGATCCATTTAT +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLCQIRF*PRRSIY
Trigger: ATAAATGGATCTCCTGGGGCAGAATCTGATTTGGCA...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATTACACAAAGAAGGGTTaGTATCGTTCAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDYTKKG*YRSKYS
Trigger: ACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTA...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGGGTTTCTTGGAATACTaGTATCATCCGAATCTGTAT +
Preference number: 4 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSGFLEY*YHPNLY
Trigger: ATACAGATTCGGATGATAGCAGTATTCCAAGAAACC...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTGATCCCAGTAACCATTaGCTTGCCAGTAATCACGTG +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPDPSNH*LASNHV
Trigger: CACGTGATTACTGGCAAGGCAATGGTTACTGGGATC...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTA +
Preference number: 4 (lower is better)
Translates to: LDNIWLLETVQESTAAVHRQVSF*SKVSIL
Trigger: TAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCT...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAAGACAGGTAAGTTTCTaGTCCAAAGTTTCAATTCTA +
Preference number: 4 (lower is better)
Translates to: VLDNIWLLETVQESTAAVRQVSF*SKVSIL
Trigger: TAGAATTGAAACTTTGGAGCAGAAACTTACCTGTCT...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTCAAAGTAGAATTCTTTaGCACAACCACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFQSRIL*HNHNRL
Trigger: CAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTG...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGAGAAATTTATCGGACTaGTCTGAAAAATGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMRNLSD*SEKWDP
Trigger: TGGATCCCATTTTTCAGACCAGTCCGATAAATTTCT...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGAAGATCAAAGTAACATaGCATTTTCCCTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVKIKVT*HFPLLG
Trigger: GCCAAGCAAGGGAAAATGCCATGTTACTTTGATCTT...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp AGTGTCCTCTTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATACAATAATCCCCATTTaGACACCGAGAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: SVLFGFVNSPKLLHVLLNTIIPI*TPRRTF
Trigger: GAATGTTCTTCTCGGTGTCCAAATGGGGATTATTGT...ATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAAGAGGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTCTGAAACCGTCTATTaGAACAATAATCCCCATTTG +
Preference number: 4 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMSETVY*NNNPHL
Trigger: CAAATGGGGATTATTGTTCCAATAGACGGTTTCAGA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACCATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCTTCACAGTCCATTTTTaGGTTTCACAATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TIFLFLHRMHARFSFFFSFTVHF*VSQFGS
Trigger: TGAACCAAATTGTGAAACCCAAAAATGGACTGTGAA...GCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR CCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTTGCCTTCTAGCTCACTaGTTGCATCAGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPCLLAH*LHQRLH
Trigger: GTGCAATCTCTGATGCAACCAGTGAGCTAGAAGGCA...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTCACTGGACGATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTG...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTGGGACATTTTCTAATTaGTCAAGATCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLGTFSN*SRSSLP
Trigger: TGGCAAAGAGGATCTTGATCAATTAGAAAATGTCCC...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTGACAGACTGTTGGTTTaGATCCCAAACACTATAATT +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFDRLLV*IPNTII
Trigger: AATTATAGTGTTTGGGATTCAAACCAACAGTCTGTC...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACGTTTCTTTCCCTGCATaGTTTAAAAACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: IALQVLRILTVLQLLIHNVSFPA*FKNSEL
Trigger: AAGTTCAGAGTTTTTAAAGCATGCAGGGAAAGAAAC...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp GCTAGGTTCTCGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTGAGAAAAGGAAACCCTCGTATCAACTaGTTCTTTAACTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: ARFSFFFSTKLEMELRKGNPRIN*FFNYCF
Trigger: AAAACAGTAGTTAAAGAACCAGTTGATACGAGGGTT...TCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACGAGAACCTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR CCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTCTATCTGGCCTGTTTTaGAAAGTGGTCTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPLSGLF*KVVCCQ
Trigger: TTGGCAACAGACCACTTTCCAAAACAGGCCAGATAG...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CCA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTCTGAAACCGTCTATTaGAACAATAATCCCCATTTG +
Preference number: 4 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFSETVY*NNNPHL
Trigger: CAAATGGGGATTATTGTTCCAATAGACGGTTTCAGA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATTTCACAGTCCATTTTTaGGTTTCACAATTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDFTVHF*VSQFGS
Trigger: TGAACCAAATTGTGAAACCCAAAAATGGACTGTGAA...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTAGTACAGTATATGTCTaGATCTTTGGTTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLSTVYV*IFGFAA
Trigger: TGCTGCAAAACCAAAGATTCAGACATATACTGTACT...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR TCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTGAATTCCCTTCTTCTTaGGCCTCTTGCAAACATTTC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPEFPSS*ASCKHF
Trigger: GAAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTC...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTTGTTCTGCATTTTGCTaGTACTTGTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPCSAFC*YLCPPQ
Trigger: TTGTGGTGGACACAAGTATCAGCAAAATGCAGAACA...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp ACTGGTTGCATCAGAGATTGCACTGTCCATGCTATTTTCACTTATAATTTTCAGCTGAATCTTTGGTTTTaGAGCAAGAAACCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: TGCIRDCTVHAIFTYNFQLNLWF*SKKPSY
Trigger: ATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAG...CTGAAAATTATAAGTGAAAATAGCATGGACAGTGCAATCTCTGATGCAACCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR GCA 90 bp AGTGTCCTCTTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTTTCTTTCCCTGCATaGTTTAAAAACTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: SVLFGFVNSPKLLHVLLNVSFPA*FKNSEL
Trigger: AAGTTCAGAGTTTTTAAAGCATGCAGGGAAAGAAAC...ATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAAGAGGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTGTCTATAACTTTGACTaGTCCGAGAAGAACAAGGAC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPVYNFD*SEKNKD
Trigger: GTCCTTGTTCTTCTCGGAGCAGTCAAAGTTATAGAC...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTTATGACTTCCACATCTaGATGCTGTTTTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLYDFHI*MLFSLK
Trigger: TTTCAGAGAAAACAGCATGCAGATGTGGAAGTCATA...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR GCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTGATGTTTTTGTTTCGTaGATACTCCTTCACTCGAGC +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPDVFVS*ILLHSS
Trigger: GCTCGAGTGAAGGAGTATGCACGAAACAAAAACATC...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CCA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGAACCCTCGTATCAACTaGTTCTTTAACTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVNPRIN*FFNYCF
Trigger: AAAACAGTAGTTAAAGAACCAGTTGATACGAGGGTT...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CCA 90 bp ACTGGTTGCATCAGAGATTGCACTGTCCATGCTATTTTCACTTATAATTTTCAGAGAAATTTATCGGACTaGTCTGAAAAATGGGATCCA +
Preference number: 4 (lower is better)
Translates to: TGCIRDCTVHAIFTYNFQRNLSD*SEKWDP
Trigger: TGGATCCCATTTTTCAGACCAGTCCGATAAATTTCT...CTGAAAATTATAAGTGAAAATAGCATGGACAGTGCAATCTCTGATGCAACCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTAGAAATTTATCGGACTaGTCTGAAAAATGGGATCCA +
Preference number: 4 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSRNLSD*SEKWDP
Trigger: TGGATCCCATTTTTCAGACCAGTCCGATAAATTTCT...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTAACTGTCCAGGAGTTTaGTGGCCAAATCACTTATAT +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPNCPGV*WPNHLY
Trigger: ATATAAGTGATTTGGCCACCAAACTCCTGGACAGTT...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR TCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTAAATCATGTGATCTTTaGCTTGAAGAAGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPKSCDL*LEEVRT
Trigger: TGTACGGACTTCTTCAAGTCAAAGATCACATGATTT...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR GCA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTTATGACTTCCACATCTaGATGCTGTTTTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPYDFHI*MLFSLK
Trigger: TTTCAGAGAAAACAGCATGCAGATGTGGAAGTCATA...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS GCA 90 bp TTCAATCTTTGCCTCATTTTCTTCTTCTCCTCACCGGCGCCCTCTTaGCGGGCCCGGCACCGGCAGCTCCTCCGACTCTGCCCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: FNLCLIFFFSSPAPS*RARHRQLLRLCPLA
Trigger: AGCCAAAGGGCAGAGTCGGAGGAGCTGCCGGTGCCGGGCCCGGCAAGAGGGCGCCGGTGAGGAGAAGAAGAAAATGAGGCAAAGATTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412450.1
CDS-3UTR CAA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACGTGCCGTTGCTCTCTTaGGGCTCTATTTCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: GRGPALARQQRWSLGVLHVPLLS*GSISAS
Trigger: TGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCAC...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTGTCATCTGGCCTTTTaGTTCCCCGCTCATAGGCAG +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKCHLAF*FPAHRQ
Trigger: CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGCCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCG +
Preference number: 5 (lower is better)
Translates to: LETSTGAATCGTTGTGGGPLSHL*LKQLPA
Trigger: CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGG...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGCCAGTAACCATTGCCTaGCCAGTAATCACGTGTCCC +
Preference number: 5 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLPVTIA*PVITCP
Trigger: GGGACACGTGATTACTGGCAAGGCAATGGTTACTGG...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGAGGTCTACCTGATCTaGGATCCCAGTAACCATTGC +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKEVYLI*DPSNHC
Trigger: GCAATGGTTACTGGGATCCAAGATCAGGTAGACCTC...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTCCTCTTTGCCATCCTaGCCTTCTAGCTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKSSLPS*PSSSLV
Trigger: AACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCG +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSPLSHL*LKQLPA
Trigger: CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCATCAGGGTAAAGGGTaGTGGGTGGGGATGCGCATG +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSHQGKG*WVGMRM
Trigger: CATGCGCATCCCCACCCACAACCCTTTACCCTGATG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCCGGTTTCCTCTGAATTaGGGTGACCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PRSISASCSRLASSPGLSRFPLN*GDPEGQ
Trigger: CTGACCCTCTGGGTCACCCAAATTCAGAGGAAACCG...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACCCAGTAACCATTGCCTaGCCAGTAATCACGTGTCCC +
Preference number: 5 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDPVTIA*PVITCP
Trigger: GGGACACGTGATTACTGGCAAGGCAATGGTTACTGG...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGTCCTCTTTGCCATCCTaGCCTTCTAGCTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLSSLPS*PSSSLV
Trigger: AACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGA...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACGGATATACTGAAGACTaGGCTGGGCATAACTCTGTA +
Preference number: 5 (lower is better)
Translates to: GRGPALARQQRWSLGVLHGYTED*AGHNSV
Trigger: TACAGAGTTATGCCCAGCCAAGTCTTCAGTATATCC...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGCTGTACCACCACTCCTaGTGGATGAGCTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKLYHHS*WMSCEN
Trigger: ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAG...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCCATCAGGGTAAAGGGTaGTGGGTGGGGATGCGCATG +
Preference number: 5 (lower is better)
Translates to: TGKTATLESWCTTPSLWAHQGKG*WVGMRM
Trigger: CATGCGCATCCCCACCCACAACCCTTTACCCTGATG...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCTTCGAAGGAAGGTCTTaGGCAGCTCTCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGFEGRS*AALKPQ
Trigger: CTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCGAA...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTTGGAAAGTGGTCTGTaGCCAAGACTTATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKLESGL*PRLIWD
Trigger: GTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCCAGTAACCATTGCCTaGCCAGTAATCACGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGPVTIA*PVITCP
Trigger: GGGACACGTGATTACTGGCAAGGCAATGGTTACTGG...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTCTGCTTCTGCTGTCTaGGGCTTTTTCGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPSASAV*GFFEAF
Trigger: GAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAGA...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTTTTGTGGCCTTCAGTaGACATCTGCAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKFCGLQ*TSAGLN
Trigger: ATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS CCA 90 bp GTAACATGGCATTTTCCCTTGCTTGGCACATTCCTTCCATCGCTGTaGGTCCCTGAAGTCATCCATGACACAGGAGGGCCCAACCAGTGC +
Preference number: 5 (lower is better)
Translates to: VTWHFPLLGTFLPSL*VPEVIHDTGGPNQC
Trigger: GCACTGGTTGGGCCCTCCTGTGTCATGGATGACTTCAGGGACCCACAGCGATGGAAGGAATGTGCCAAGCAAGGGAAAATGCCATGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
ENST00000638947.1
CDS-3UTR CAA 90 bp GGCCGGGGGCCGGCACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACGAAAAACTTATCAGTTaGAGGACAGGCTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: GRGPALARQQRWSLGVLHEKLIS*RTGFTC
Trigger: GCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTTC...GTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGTGCCGGCCCCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACGGTTTCCTCTGAATTaGGGTGACCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLRFPLN*GDPEGQ
Trigger: CTGACCCTCTGGGTCACCCAAATTCAGAGGAAACCG...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTCGGTTTCCTCTGAATTaGGGTGACCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCRFPLN*GDPEGQ
Trigger: CTGACCCTCTGGGTCACCCAAATTCAGAGGAAACCG...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGAATCAGAAGAATAAATaGGCAGCTCTTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKNQKNK*AALLAA
Trigger: GGCAGCAAGAAGAGCTGCCAATTTATTCTTCTGATT...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAATTTATCTGGCTGTTCTaGGCTCCTTTCACTCTCCAC +
Preference number: 5 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEFIWLF*APFTLH
Trigger: GTGGAGAGTGAAAGGAGCCAAGAACAGCCAGATAAA...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGTGTCATCTGGCCTTTTaGTTCCCCGCTCATAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWCHLAF*FPAHRQ
Trigger: CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACA...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCCTGCATCTGTTGCTGTaGTTTCTGAGCCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: TGKTATLESWCTTPSLWALHLLL*FLSLPL
Trigger: CAACGGGAGGCTCAGAAACAACAGCAACAGATGCAG...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACCTGCATCTGTTGCTGTaGTTTCTGAGCCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHLHLLL*FLSLPL
Trigger: CAACGGGAGGCTCAGAAACAACAGCAACAGATGCAG...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCAGCAACGCTGGAGTCTaGGTGTACTACACCATCACT +
Preference number: 5 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGSNAGV*VYYTIT
Trigger: AGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCAGCAACGCTGGAGTCTaGGTGTACTACACCATCACT +
Preference number: 5 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGSNAGV*VYYTIT
Trigger: AGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCT...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTGCCCAATTCCACCCTaGACTTTGGTGGGGAAGATT +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHCPIPP*TLVGKI
Trigger: AATCTTCCCCACCAAAGTCAAGGGTGGAATTGGGCA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CAA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGGAGATGAGGTACGCCTaGAGTATGTCTTCTTATACT +
Preference number: 5 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLEMRYA*SMSSYT
Trigger: AGTATAAGAAGACATACTCAAGGCGTACCTCATCTC...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGTTACACAAAGAAGGGTaGCTATCGTTCAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: KGLWVGMRMGLCADSTAKLHKEG*LSFKVQ
Trigger: CTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAA...CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCATCCCCACCCACAACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTACTGGAGACGGTTTCTaGGAATACTGCTATCATCCG +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSTGDGF*EYCYHP
Trigger: CGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTCACATCTGTATGACTaGTACTATCAACCCCATCAC +
Preference number: 5 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLSHLYD*YYQPHH
Trigger: GTGATGGGGTTGATAGTACAAGTCATACAGATGTGA...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCCAGTAACCATTGCCTaGCCAGTAATCACGTGTCCC +
Preference number: 5 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENPVTIA*PVITCP
Trigger: GGGACACGTGATTACTGGCAAGGCAATGGTTACTGG...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTATGGGATCCATCCTGTaGATCCCAATTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSMGSIL*IPILLF
Trigger: GAAGAGGAGAATTGGGATCAACAGGATGGATCCCAT...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAACGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: TSTGAATCGTTGTGGGAERNISF*GVSVSA
Trigger: AGCTGACACAGACACTCCCAAGAAACTAATGTTTCG...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTCTTCTAGCTCACTGGTaGCATCAGAGATTGCACTGT +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSLLAHW*HQRLHC
Trigger: ACAGTGCAATCTCTGATGCAACCAGTGAGCTAGAAG...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGGTTTCACTATCAACTTaGCATTCAGGCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLVSLST*HSGSCC
Trigger: ACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAAC...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTTTATCTGGCTGTTCTaGGCTCCTTTCACTCTCCAC +
Preference number: 5 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPFIWLF*APFTLH
Trigger: GTGGAGAGTGAAAGGAGCCAAGAACAGCCAGATAAA...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGCCCTTCCTCGTTCAGTaGTTGTGTTTTCCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: LETSTGAATCGTTGTGGGPFLVQ*LCFPFQ
Trigger: CTGAAAAGGAAAACACAACAACTGAACGAGGAAGGG...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAACCCTTCCTCGTTCAGTaGTTGTGTTTTCCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: TSTGAATCGTTGTGGGAEPFLVQ*LCFPFQ
Trigger: CTGAAAAGGAAAACACAACAACTGAACGAGGAAGGG...TTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGCTCTTTATTTTGAGTTaGCTTGTCTGGGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLLFILS*LVWVSL
Trigger: GAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAG...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGCAGAAAGGGGTTCTGCTTGATAATATATGGTaGCTTGAGACTGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: ELPHVAPLVLVEGQKGVLLDNIW*LETVQE
Trigger: CTCCTGCACAGTCTCAAGCAACCATATATTATCAAG...CAGAACCCCTTTCTGCCCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCGAGCTGTCTTCCAGTaGGGAGGTAAGACAATGGTT +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFRAVFQ*GGKTMV
Trigger: AACCATTGTCTTACCTCCCAACTGGAAGACAGCTCG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTCGAGCTGTCTTCCAGTaGGGAGGTAAGACAATGGTT +
Preference number: 5 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCRAVFQ*GGKTMV
Trigger: AACCATTGTCTTACCTCCCAACTGGAAGACAGCTCG...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTCATCAGGGTAAAGGGTaGTGGGTGGGGATGCGCATG +
Preference number: 5 (lower is better)
Translates to: RFPVRVQALDDELGHLFSHQGKG*WVGMRM
Trigger: CATGCGCATCCCCACCCACAACCCTTTACCCTGATG...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATTGCCCAATTCCACCCTaGACTTTGGTGGGGAAGATT +
Preference number: 5 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENCPIPP*TLVGKI
Trigger: AATCTTCCCCACCAAAGTCAAGGGTGGAATTGGGCA...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCGTGAGTCTACAGTTGTaGATTCTGCTATCACTGCTG +
Preference number: 5 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGVSLQL*ILLSLL
Trigger: CAGCAGTGATAGCAGAATCAACAACTGTAGACTCAC...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CAA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGATAGTGTCTATAACTTaGACTGCTCCGAGAAGAACA +
Preference number: 5 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLIVSIT*TAPRRT
Trigger: TGTTCTTCTCGGAGCAGTCAAAGTTATAGACACTAT...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GGGCAGGAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCCTGCATTTGGAAAGTGGTCTGTaGCCAAGACTTATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GQEHLSSIRVAGIHIGLHLESGL*PRLIWD
Trigger: GTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAA...ATGCAGGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTACTATCTGGCCTGTTTaGGAAAGTGGTCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCTIWPV*ESGLLP
Trigger: TGGCAACAGACCACTTTCCAAAACAGGCCAGATAGT...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACTATCTGGCCTGTTTaGGAAAGTGGTCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: TGKTATLESWCTTPSLWATIWPV*ESGLLP
Trigger: TGGCAACAGACCACTTTCCAAAACAGGCCAGATAGT...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTGTCCTTAATGGAATaGCTGCTTATTTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDVSLME*LLISGA
Trigger: AGCACCTGAAATAAGCAGCAATTCCATTAAGGACAC...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTAAACCCAACCCTCAGTaGTCCGTTCACAGTCCATTT +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFKPNPQ*SVHSPF
Trigger: AAATGGACTGTGAACGGACAACTGAGGGTTGGGTTT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTT +
Preference number: 5 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLSLRPA*NNWKYF
Trigger: AAAGTACTTCCAATTATTCAACGCTGGTCTCAGACT...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAGTGCCGTTGCTCTCTTaGGGCTCTATTTCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIVPLLS*GSISAS
Trigger: TGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCAC...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCCAACTGTCCAGGAGTTaGGTGGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGQLSRS*VAKSLI
Trigger: TATAAGTGATTTGGCCACCAAACTCCTGGACAGTTG...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCGGCCGTCACCTAGCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTACAATTGGTGGAGTaGTCTGTGAATAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: PGRHLALPSRSTTKTAHDVQLVE*SVNKVM
Trigger: CATCACCTTATTCACAGACAACTCCACCAATTGTAC...GTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGCTAGGTGACGGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGCTGTACCACCACTCCTaGTGGATGAGCTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPALYHHS*WMSCEN
Trigger: ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAG...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGAATCATTTAATCGATTaGATGGAGCTGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMNHLID*MELETQ
Trigger: CTGGGTCTCCAGCTCCATCAAATCGATTAAATGATT...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTGAAAGCATGCATGCTTaGACCAAAGGGGATAATTCC +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFESMHA*TKGDNS
Trigger: GGAATTATCCCCTTTGGTCAAAGCATGCATGCTTTC...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCGGAATTCCCTTCTTCTaGAGCCTCTTGCAAACATTT +
Preference number: 5 (lower is better)
Translates to: PRSISASCSRLASSPGLSGIPFF*SLLQTF
Trigger: AAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTCC...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCTCACATCTGTATGACTaGTACTATCAACCCCATCAC +
Preference number: 5 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGSHLYD*YYQPHH
Trigger: GTGATGGGGTTGATAGTACAAGTCATACAGATGTGA...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGGTTGCCAAGACTTATTaGGGACATCTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: LETSTGAATCGTTGTGGGVAKTY*GHLQNQ
Trigger: CTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAAC...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGTTGGAAAGTGGTCTGTaGCCAAGACTTATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: QQRWSLGVLHHHSGPHTGLESGL*PRLIWD
Trigger: GTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAA...CCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTATAGCTACTGTCAGGTaGCTGATACGTGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCIATVR*LIRGRR
Trigger: CCTTCTACCACGTATCAGCAACCTGACAGTAGCTAT...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCATACTGTTCTGCATTTaGCTGATACTTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGILFCI*LILVST
Trigger: GGTGGACACAAGTATCAGCAAAATGCAGAACAGTAT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACGAGGTCTACCTGATCTaGGATCCCAGTAACCATTGC +
Preference number: 5 (lower is better)
Translates to: KTATLESWCTTPSLWATYEVYLI*DPSNHC
Trigger: GCAATGGTTACTGGGATCCAAGATCAGGTAGACCTC...GTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGTGTCCTTAATGGAATaGCTGCTTATTTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSVSLME*LLISGA
Trigger: AGCACCTGAAATAAGCAGCAATTCCATTAAGGACAC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACTTCTAGCTCACTGGTaGCATCAGAGATTGCACTGT +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLLLAHW*HQRLHC
Trigger: ACAGTGCAATCTCTGATGCAACCAGTGAGCTAGAAG...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCGCTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGTTTCACTATCAACTTaGCATTCAGGCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: ALTAPPRRRPRFKSGVRSVSLST*HSGSCC
Trigger: ACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAAC...AGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGTGCCGTTGCTCTCTTaGGGCTCTATTTCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCVPLLS*GSISAS
Trigger: TGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCAC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACGTGCCGTTGCTCTCTTaGGGCTCTATTTCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: LVYYTITLGHILGTGNFHVPLLS*GSISAS
Trigger: TGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCAC...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGCAACTGTCCAGGAGTTaGGTGGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWQLSRS*VAKSLI
Trigger: TATAAGTGATTTGGCCACCAAACTCCTGGACAGTTG...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCAGTCTGCGAAACATTAGTTTCTTGGGAGTGTCTGTGTCAGCTTCTGTGCTCACCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCG +
Preference number: 5 (lower is better)
Translates to: SVCETLVSWECLCQLLCSPLSHL*LKQLPA
Trigger: CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGG...TGAGCACAGAAGCTGACACAGACACTCCCAAGAAACTAATGTTTCGCAGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTCCGTTGAGCCACCTCTaGCTCAAACAACTTCCGGCG +
Preference number: 5 (lower is better)
Translates to: VFIICWSSQVHLSFMLKAPLSHL*LKQLPA
Trigger: CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGG...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGTGGACATGTCTGTCCTaGATAATATATGGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LETSTGAATCGTTGTGGGWTCLS*IIYGCL
Trigger: CAAGCAACCATATATTATCAAGGACAGACATGTCCA...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTCACACCATAGACTGTaGGACATGTCTGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHSHHRL*DMSVLD
Trigger: ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAAGGGCTGAGGCTGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGGATCCAAGAGATTATTaGTCACAACCATTTCAGATG +
Preference number: 5 (lower is better)
Translates to: QGLRLPWCNYCSHCCGWLDPRDY*SQPFQM
Trigger: CATCTGAAATGGTTGTGACAAATAATCTCTTGGATC...CAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGGTTTTCATCATATGTaGGAGTTCCCAGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: GIISWAFPSRRIPLSLPCGFHHM*EFPGPS
Trigger: AGATGGACCTGGGAACTCCAACATATGATGAAAACC...ACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCCTTCTTTGCTTTTCTTaGCTAGTTCACTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: PRSISASCSRLASSPGLSLLCFS*LVHWRC
Trigger: ACACCTCCAGTGAACTAGCAAAGAAAAGCAAAGAAG...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS TCA 90 bp TCTACAGTTGTTGATTCTGCTATCACTGCTGGTAATGGTGCTGCATaGGTAGGTGGAGATGCTACTGCTGTGGTAGTAGCCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: STVVDSAITAGNGAA*VGGDATAVVVASSG
Trigger: GCCACTGCTGGCTACTACCACAGCAGTAGCATCTCCACCTACTCATGCAGCACCATTACCAGCAGTGATAGCAGAATCAACAACTGTAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
CDS GCA 90 bp CCCCAGTTCCAGGAGGTCTACCTGATCTTGGATCCCAGTAACCATTaGCTTGCCAGTAATCACGTGTCCCACCATACTGTTCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: PQFQEVYLILDPSNH*LASNHVSHHTVLHF
Trigger: AAAATGCAGAACAGTATGGTGGGACACGTGATTACTGGCAAGGCAATGGTTACTGGGATCCAAGATCAGGTAGACCTCCTGGAACTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTGAATCTTTGGTTTaGCAGCAAGAAACCCTCGTA +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFSESLV*QQETLV
Trigger: TACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTACCTACTTCTACTATaGTTTCTTTCCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPYLLLL*FLSLHA
Trigger: AGCATGCAGGGAAAGAAACAATAGTAGAAGTAGGTA...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTGGGCTTTCCGAAAAACTTATCAGTTaGAGGACAGGCTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: PRSISASCSRLASSPGLSEKLIS*RTGFTC
Trigger: GCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTTC...GGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGCAGGCGATTATCTATTaGTTTTCTACTGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMQAIIY*FSTGLC
Trigger: ACACAGTCCAGTAGAAAACAAATAGATAATCGCCTG...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCCCTGGTGCAACTATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTGTTGCCAAGACTTATTaGGGACATCTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: CPGATIVVTAAAGCTTTPVAKTY*GHLQNQ
Trigger: CTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAAC...AGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATAGTTGCACCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAACTATCTGGCCTGTTTaGGAAAGTGGTCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: SSHFAVRFPVRVQALDDETIWPV*ESGLLP
Trigger: TGGCAACAGACCACTTTCCAAAACAGGCCAGATAGT...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATATAGCTACTGTCAGGTaGCTGATACGTGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDIATVR*LIRGRR
Trigger: CCTTCTACCACGTATCAGCAACCTGACAGTAGCTAT...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGGAGGTCTACCTGATCTaGGATCCCAGTAACCATTGC +
Preference number: 5 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQEVYLI*DPSNHC
Trigger: GCAATGGTTACTGGGATCCAAGATCAGGTAGACCTC...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAATGGGATCCATCCTGTaGATCCCAATTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIMGSIL*IPILLF
Trigger: GAAGAGGAGAATTGGGATCAACAGGATGGATCCCAT...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGTATGAAGGAAGGTCTTaGGCAGCTCTCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: VYHICHLAFLFPAHRQKRYEGRS*AALKPQ
Trigger: CTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCATA...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCGTTCACAGTCCATTTTaGGGTTTCACAATTTGGTTC +
Preference number: 5 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGVHSPF*GFTIWF
Trigger: GAACCAAATTGTGAAACCCAAAAATGGACTGTGAAC...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAAAAACCCAACCCTCAGTaGTCCGTTCACAGTCCATTT +
Preference number: 5 (lower is better)
Translates to: SSHFAVRFPVRVQALDDEKPNPQ*SVHSPF
Trigger: AAATGGACTGTGAACGGACAACTGAGGGTTGGGTTT...TTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATAAACCCAACCCTCAGTaGTCCGTTCACAGTCCATTT +
Preference number: 5 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDKPNPQ*SVHSPF
Trigger: AAATGGACTGTGAACGGACAACTGAGGGTTGGGTTT...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGACAGCACCGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTT +
Preference number: 5 (lower is better)
Translates to: LTAPPRRRPRFKSGVRSGSLRPA*NNWKYF
Trigger: AAAGTACTTCCAATTATTCAACGCTGGTCTCAGACT...GCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCGGTGCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLRNISF*GVSVSA
Trigger: AGCTGACACAGACACTCCCAAGAAACTAATGTTTCG...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACTGGCAAGACAGCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCTGGTTGCATCAGAGATaGCACTGTCCATGCTATTTT +
Preference number: 5 (lower is better)
Translates to: TGKTATLESWCTTPSLWAWLHQR*HCPCYF
Trigger: AAAATAGCATGGACAGTGCAATCTCTGATGCAACCA...GGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCTGTCTTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGTTTCACTATCAACTTaGCATTCAGGCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHVSLST*HSGSCC
Trigger: ACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAAC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATCTAGTTTTGTGCCGTaGCTCTCTTTGGGCTCTATT +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLSSFVP*LSLGSI
Trigger: AATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGGAAACTTCCACAGGAGCTGCCACATGTGGCACCACTGGTACTGGTGGAGGGCAGTTTGACTTTTCTTaGGAATTCGATATACCTCCT +
Preference number: 5 (lower is better)
Translates to: LETSTGAATCGTTGTGGGQFDFS*EFDIPP
Trigger: AGGAGGTATATCGAATTCCAAAGAAAAGTCAAACTG...CCCTCCACCAGTACCAGTGGTGCCACATGTGGCAGCTCCTGTGGAAGTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGCTCTTTATTTTGAGTTaGCTTGTCTGGGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWLFILS*LVWVSL
Trigger: GAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAG...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACAGCAACGCTGGAGTCTaGGTGTACTACACCATCACT +
Preference number: 5 (lower is better)
Translates to: LVYYTITLGHILGTGNFHSNAGV*VYYTIT
Trigger: AGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCT...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAGGTTTTCATCATATGTaGGAGTTCCCAGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLGFHHM*EFPGPS
Trigger: AGATGGACCTGGGAACTCCAACATATGATGAAAACC...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCAACGCTGGAGTCTTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAAGGTTTTCATCATATGTaGGAGTTCCCAGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: ATLESWCTTPSLWATYWEGFHHM*EFPGPS
Trigger: AGATGGACCTGGGAACTCCAACATATGATGAAAACC...TTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAAGACTCCAGCGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCTCTGCTTCTGCTGTCTaGGGCTTTTTCGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVSASAV*GFFEAF
Trigger: GAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAGA...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCTTCTTTGCTTTTCTTaGCTAGTTCACTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFLLCFS*LVHWRC
Trigger: ACACCTCCAGTGAACTAGCAAAGAAAAGCAAAGAAG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACAGATGGAGTTCATTTTaGTGGCCTTCAGTTGACATC +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHRWSSF*WPSVDI
Trigger: GATGTCAACTGAAGGCCACAAAAATGAACTCCATCT...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCACGCATCAGGGTAAAGGGTaGTGGGTGGGGATGCGCATG +
Preference number: 5 (lower is better)
Translates to: IFLFLHRMHARFSFFFSTHQGKG*WVGMRM
Trigger: CATGCGCATCCCCACCCACAACCCTTTACCCTGATG...CGTGCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS TCA 90 bp TCCTTGAGTTCGATCATACACAACCCCAGTTCCAGGAGGTCTACCTaGTCTTGGATCCCAGTAACCATTGCCTTGCCAGTAATCACGTGT +
Preference number: 5 (lower is better)
Translates to: SLSSIIHNPSSRRST*SWIPVTIALPVITC
Trigger: ACACGTGATTACTGGCAAGGCAATGGTTACTGGGATCCAAGATCAGGTAGACCTCCTGGAACTGGGGTTGTGTATGATCGAACTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATGTGAGTCTACAGTTGTaGATTCTGCTATCACTGCTG +
Preference number: 5 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDVSLQL*ILLSLL
Trigger: CAGCAGTGATAGCAGAATCAACAACTGTAGACTCAC...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGGAGATGAGGTACGCCTaGAGTATGTCTTCTTATACT +
Preference number: 5 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKEMRYA*SMSSYT
Trigger: AGTATAAGAAGACATACTCAAGGCGTACCTCATCTC...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTATCTGAATCTTTGGTTTaGCAGCAAGAAACCCTCGTA +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLSESLV*QQETLV
Trigger: TACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGA...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTCTGAATCTTTGGTTTaGCAGCAAGAAACCCTCGTA +
Preference number: 5 (lower is better)
Translates to: LPLSHLLLKQLPAFLCRKSESLV*QQETLV
Trigger: TACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGA...CTTTCTACAGAGGAACGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCATACAAATGTCTCCTaGACTCCAATCTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFHTNVS*TPISHL
Trigger: AAGATGAGAGATTGGAGTCAAGGAGACATTTGTATG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACCATACAAATGTCTCCTaGACTCCAATCTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHHTNVS*TPISHL
Trigger: AAGATGAGAGATTGGAGTCAAGGAGACATTTGTATG...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTCAGGCGATTATCTATTaGTTTTCTACTGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFQAIIY*FSTGLC
Trigger: ACACAGTCCAGTAGAAAACAAATAGATAATCGCCTG...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATAATCAGAAGAATAAATaGGCAGCTCTTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHCCGWLYHHSLWMSCENNQKNK*AALLAA
Trigger: GGCAGCAAGAAGAGCTGCCAATTTATTCTTCTGATT...ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGTTGCCAAGACTTATTaGGGACATCTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHVAKTY*GHLQNQ
Trigger: CTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAAC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGGTTTCCGGTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTATAGCTACTGTCAGGTaGCTGATACGTGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RFPVRVQALDDELGHLFSIATVR*LIRGRR
Trigger: CCTTCTACCACGTATCAGCAACCTGACAGTAGCTAT...AGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTACCGGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCGAGGTCTACCTGATCTaGGATCCCAGTAACCATTGC +
Preference number: 5 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVEVYLI*DPSNHC
Trigger: GCAATGGTTACTGGGATCCAAGATCAGGTAGACCTC...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAATCTGGTACTTGTCCTaGAGTTCGATCATACACAAC +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLIWYLS*SSIIHN
Trigger: GTTGTGTATGATCGAACTCAAGGACAAGTACCAGAT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTATCTGGTACTTGTCCTaGAGTTCGATCATACACAAC +
Preference number: 5 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCIWYLS*SSIIHN
Trigger: GTTGTGTATGATCGAACTCAAGGACAAGTACCAGAT...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGGTGGAGGGGCAGAAAGGGGTTCTGTAGAATGTCCCACCAAGGGCTGAGCATGACATGCTATTTCACCTaGAGCTCTTTCATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: WWRGRKGFCRMSHQGLSMTCYFT*SSFIFR
Trigger: TCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGT...CATGCTCAGCCCTTGGTGGGACATTCTACAGAACCCCTTTCTGCCCCTCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTAACAATAATCCCCATTaGGACACCGAGAAGAACATT +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFNNNPH*DTEKNI
Trigger: AATGTTCTTCTCGGTGTCCAAATGGGGATTATTGTT...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TATTGTAGTCACTGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTTGGTTGCATCAGAGATaGCACTGTCCATGCTATTTT +
Preference number: 5 (lower is better)
Translates to: YCSHCCGWLYHHSLWMSCWLHQR*HCPCYF
Trigger: AAAATAGCATGGACAGTGCAATCTCTGATGCAACCA...ACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCAGTGACTACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAATTCTTCCTCTTTCCTCTTTGCCATCCTaGCCTTCTAGCTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: CIQAAVVGVAVVTAILPLSSLPS*PSSSLV
Trigger: AACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGA...AAGAGGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTTTTATCTGGCTGTTCTaGGCTCCTTTCACTCTCCAC +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCFIWLF*APFTLH
Trigger: GTGGAGAGTGAAAGGAGCCAAGAACAGCCAGATAAA...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGGTTTGGCTGTTTCCCCACCCAAACTCAACTTGAGGAGGTAACTGAATCATGGAGCAACGCTGGAGTCTaGGTGTACTACACCATCACT +
Preference number: 5 (lower is better)
Translates to: WFGCFPTQTQLEEVTESWSNAGV*VYYTIT
Trigger: AGTGATGGTGTAGTACACCAAGACTCCAGCGTTGCT...CCATGATTCAGTTACCTCCTCAAGTTGAGTTTGGGTGGGGAAACAGCCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp CGCCAAGGAGAAGACCCAGGTTTAAGAGTGGAGTCAGGTCTGGCCAGGGTCTTTTGGACATGTCTGTCCTaGATAATATATGGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: RQGEDPGLRVESGLARVFWTCLS*IIYGCL
Trigger: CAAGCAACCATATATTATCAAGGACAGACATGTCCA...AAAGACCCTGGCCAGACCTGACTCCACTCTTAAACCTGGGTCTTCTCCTTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCAAGGGCTGAGCATGATCATAAGGAGCAGGAGAACACACTGGGTCCATGCTGGCATAACTCTGTACAATaGGTGGAGTTGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: PRAEHDHKEQENTLGPCWHNSVQ*VELSVN
Trigger: ATTCACAGACAACTCCACCAATTGTACAGAGTTATG...CCAGCATGGACCCAGTGTGTTCTCCTGCTCCTTATGATCATGCTCAGCCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAACCAGCAAAGGGATGATGCGGGGCATTATAACCAAGAGAGTCATAGGGCAGCTGTACCACCACTCCTaGTGGATGAGCTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: VTSKGMMRGIITKRVIGQLYHHS*WMSCEN
Trigger: ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAG...CTGCCCTATGACTCTCTTGGTTATAATGCCCCGCATCATCCCTTTGCTGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCCGAGCTGTCTTCCAGTaGGGAGGTAAGACAATGGTT +
Preference number: 5 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVRAVFQ*GGKTMV
Trigger: AACCATTGTCTTACCTCCCAACTGGAAGACAGCTCG...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ACAGGGGTGGGACAGAAAGGCCCACAGGATTTCCTCTCCCTAGAGTCTGTCTTAAGATGGAGTTCATTTTaGTGGCCTTCAGTTGACATC +
Preference number: 5 (lower is better)
Translates to: TGVGQKGPQDFLSLESVLRWSSF*WPSVDI
Trigger: GATGTCAACTGAAGGCCACAAAAATGAACTCCATCT...TAAGACAGACTCTAGGGAGAGGAAATCCTGTGGGCCTTTCTGTCCCACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACTTTGTTTTGGTGCCTTaGGGCAAAAATCGACTAGAA +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHFVLVP*GKNRLE
Trigger: TTCTAGTCGATTTTTGCCCAAAGGCACCAAAACAAA...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CAA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATTCGAAGGAAGGTCTTaGGCAGCTCTCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQFEGRS*AALKPQ
Trigger: CTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCGAA...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS-3UTR CAA 90 bp GAGTGGAGTCAGGTCTGGCCAGGGTCTTTTCTAAGCCCTTGCACCTCTGATGGCAGAGCAATTTCCTTTTaGAGTGGCATCTATTATCTC +
Preference number: 5 (lower is better)
Translates to: EWSQVWPGSFLSPCTSDGRAISF*SGIYYL
Trigger: GAGATAATAGATGCCACTCAAAAAGGAAATTGCTCT...GCCATCAGAGGTGCAAGGGCTTAGAAAAGACCCTGGCCAGACCTGACTCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000445387.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCCATTAGAACTGTTATaGGTGTATGTGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCPLELL*VYVARP
Trigger: TGGCCTTGCCACATACACCAATAACAGTTCTAATGG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CAA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAAATCATTTAATCGATTaGATGGAGCTGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: LHGITWWVTSKGMMRGIINHLID*MELETQ
Trigger: CTGGGTCTCCAGCTCCATCAAATCGATTAAATGATT...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTGAAAGCATGCATGCTTaGACCAAAGGGGATAATTCC +
Preference number: 5 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVESMHA*TKGDNS
Trigger: GGAATTATCCCCTTTGGTCAAAGCATGCATGCTTTC...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGTACCTACTTCTACTATaGTTTCTTTCCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLYLLLL*FLSLHA
Trigger: AGCATGCAGGGAAAGAAACAATAGTAGAAGTAGGTA...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCTGCGGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTTGGTTGCCAAGACTTATTaGGGACATCTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: CCGWLYHHSLWMSCENLLVAKTY*GHLQNQ
Trigger: CTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAAC...CAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCCGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTATGAAGGAAGGTCTTaGGCAGCTCTCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDYEGRS*AALKPQ
Trigger: CTGGGGCTTGAGAGCTGCCAAAGACCTTCCTTCATA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATTGGTTGCATCAGAGATaGCACTGTCCATGCTATTTT +
Preference number: 5 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDWLHQR*HCPCYF
Trigger: AAAATAGCATGGACAGTGCAATCTCTGATGCAACCA...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAGAGAGACCCTCACCATTTTCCATCAGAGCTTCTAGCTCTCCATCCACTGAATCTTCTAGCTCACTGGTaGCATCAGAGATTGCACTGT +
Preference number: 5 (lower is better)
Translates to: QRDPHHFPSELLALHPLNLLAHW*HQRLHC
Trigger: ACAGTGCAATCTCTGATGCAACCAGTGAGCTAGAAG...ATTCAGTGGATGGAGAGCTAGAAGCTCTGATGGAAAATGGTGAGGGTCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGTCATCTGGCCTTTTaGTTCCCCGCTCATAGGCAG +
Preference number: 5 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQCHLAF*FPAHRQ
Trigger: CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACA...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGTCATCTGGCCTTTTaGTTCCCCGCTCATAGGCAG +
Preference number: 5 (lower is better)
Translates to: LDNIWLLETVQESTAAVHCHLAF*FPAHRQ
Trigger: CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACA...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAAGAGAGTCATAGGGCAGTGGTGATGTCATTCCCAGGTTCTGCATCTGTTGCTTCACACCATAGACTGTaGGACATGTCTGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: QESHRAVVMSFPGSASVASHHRL*DMSVLD
Trigger: ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGA...AGCAACAGATGCAGAACCTGGGAATGACATCACCACTGCCCTATGACTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CCACAGGATTTCCTCTCCCTAGAGTCTGTCTTACCTGACCACCCATCCTCCCACGATCCAAGAGATTATTaGTCACAACCATTTCAGATG +
Preference number: 5 (lower is better)
Translates to: PQDFLSLESVLPDHPSSHDPRDY*SQPFQM
Trigger: CATCTGAAATGGTTGTGACAAATAATCTCTTGGATC...GTGGGAGGATGGGTGGTCAGGTAAGACAGACTCTAGGGAGAGGAAATCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGTTGTTTCTGAGCCTCCCGTTGAGCCACCTCTTGCTCAAACAACTTCCGGCGGATCCAAGAGATTATTaGTCACAACCATTTCAGATG +
Preference number: 5 (lower is better)
Translates to: LLFLSLPLSHLLLKQLPADPRDY*SQPFQM
Trigger: CATCTGAAATGGTTGTGACAAATAATCTCTTGGATC...CGCCGGAAGTTGTTTGAGCAAGAGGTGGCTCAACGGGAGGCTCAGAAACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGCGAGCTGTCTTCCAGTaGGGAGGTAAGACAATGGTT +
Preference number: 5 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQRAVFQ*GGKTMV
Trigger: AACCATTGTCTTACCTCCCAACTGGAAGACAGCTCG...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCAGGTTTTCATCATATGTaGGAGTTCCCAGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: SYVGVPRSISASCSRLASGFHHM*EFPGPS
Trigger: AGATGGACCTGGGAACTCCAACATATGATGAAAACC...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTCTGCTTCTGCTGTCTaGGGCTTTTTCGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDSASAV*GFFEAF
Trigger: GAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAGA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS TCA 90 bp TCTCTCAGACCTAGAGTGAGATCTGCTCCGCCGTCGCTCTCTTTCTaGTCTACATCGGGAAGATACATACCGAGTATCTCTTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SLRPRVRSAPPSLSF*STSGRYIPSISFKF
Trigger: AAACTTGAAAGAGATACTCGGTATGTATCTTCCCGATGTAGATCAGAAAGAGAGCGACGGCGGAGCAGATCTCACTCTAGGTCTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTAATCATTTAATCGATTaGATGGAGCTGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCNHLID*MELETQ
Trigger: CTGGGTCTCCAGCTCCATCAAATCGATTAAATGATT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGGAAAGCATGCATGCTTaGACCAAAGGGGATAATTCC +
Preference number: 5 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQESMHA*TKGDNS
Trigger: GGAATTATCCCCTTTGGTCAAAGCATGCATGCTTTC...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATATTACACAAAGAAGGGTaGCTATCGTTCAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: LHGITWWVTSKGMMRGIILHKEG*LSFKVQ
Trigger: CTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAA...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATATACCTACTTCTACTATaGTTTCTTTCCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIYLLLL*FLSLHA
Trigger: AGCATGCAGGGAAAGAAACAATAGTAGAAGTAGGTA...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCACTGGAGACGGTTTCTaGGAATACTGCTATCATCCG +
Preference number: 5 (lower is better)
Translates to: VRVQALDDELGHLFSEYFTGDGF*EYCYHP
Trigger: CGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGT...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTATAGCTACTGTCAGGTaGCTGATACGTGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLIATVR*LIRGRR
Trigger: CCTTCTACCACGTATCAGCAACCTGACAGTAGCTAT...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTGTGTCCTTAATGGAATaGCTGCTTATTTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCVSLME*LLISGA
Trigger: AGCACCTGAAATAAGCAGCAATTCCATTAAGGACAC...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATGCGGGGCATTATAGTTCACAGTCCATTTTaGGGTTTCACAATTTGGTTC +
Preference number: 5 (lower is better)
Translates to: LHGITWWVTSKGMMRGIIVHSPF*GFTIWF
Trigger: GAACCAAATTGTGAAACCCAAAAATGGACTGTGAAC...TATAATGCCCCGCATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGTCTAGTTTTGTGCCGTaGCTCTCTTTGGGCTCTATT +
Preference number: 5 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQSSFVP*LSLGSI
Trigger: AATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGA...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGTCTGCTTCTGCTGTCTaGGGCTTTTTCGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMSASAV*GFFEAF
Trigger: GAAGGCCTCGAAAAAGCCCAAGACAGCAGAAGCAGA...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTCTTCTTTGCTTTTCTTaGCTAGTTCACTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVLLCFS*LVHWRC
Trigger: ACACCTCCAGTGAACTAGCAAAGAAAAGCAAAGAAG...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCATTTTGTGGCCTTCAGTaGACATCTGCAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQAFCGLQ*TSAGLN
Trigger: ATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAA...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGTTTTGTGGCCTTCAGTaGACATCTGCAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQFCGLQ*TSAGLN
Trigger: ATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAA...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGGTTTGGCTGTTTCCCCACCCAAACTCAACTTGAGGAGGTAACTGAATCATGGGAGATGAGGTACGCCTaGAGTATGTCTTCTTATACT +
Preference number: 5 (lower is better)
Translates to: WFGCFPTQTQLEEVTESWEMRYA*SMSSYT
Trigger: AGTATAAGAAGACATACTCAAGGCGTACCTCATCTC...CCATGATTCAGTTACCTCCTCAAGTTGAGTTTGGGTGGGGAAACAGCCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp GATCCACATAGGCCTGCATGGGATAACCTGGTGGGTAACCAGCAAAGGGATGATAGTTTTGAAGAATACTaGCCTCTTCTTTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: DPHRPAWDNLVGNQQRDDSFEEY*PLLSIS
Trigger: AGAGATGGAAAGAAGAGGCAAGTATTCTTCAAAACT...ATCATCCCTTTGCTGGTTACCCACCAGGTTATCCCATGCAGGCCTATGTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGCCTTGTGATAGTTTTGAAGAATACTaGCCTCTTCTTTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: IISWAFPSRRIPLSLPCDSFEEY*PLLSIS
Trigger: AGAGATGGAAAGAAGAGGCAAGTATTCTTCAAAACT...ATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GATGTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCTCTGAATCTTTGGTTTaGCAGCAAGAAACCCTCGTA +
Preference number: 5 (lower is better)
Translates to: DVFSLEYPSPSLNGGTAVSESLV*QQETLV
Trigger: TACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGA...GACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp TCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGCATCATTACACAAAGAAGGGTaGCTATCGTTCAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: SYVGVPRSISASCSRLASLHKEG*LSFKVQ
Trigger: CTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAA...TGATGCCAGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACCATACAAATGTCTCCTaGACTCCAATCTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: LVYYTITLGHILGTGNFHHTNVS*TPISHL
Trigger: AAGATGAGAGATTGGAGTCAAGGAGACATTTGTATG...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACTGACAGACTGTTGGTTCAGGCGATTATCTATTaGTTTTCTACTGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: CLRLCRRVLLLYTDRLLVQAIIY*FSTGLC
Trigger: ACACAGTCCAGTAGAAAACAAATAGATAATCGCCTG...AACCAACAGTCTGTCAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGGTTTGGCTGTTTCCCCACCCAAACTCAACTTGAGGAGGTAACTGAATCATGGAATCAGAAGAATAAATaGGCAGCTCTTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: WFGCFPTQTQLEEVTESWNQKNK*AALLAA
Trigger: GGCAGCAAGAAGAGCTGCCAATTTATTCTTCTGATT...CCATGATTCAGTTACCTCCTCAAGTTGAGTTTGGGTGGGGAAACAGCCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATACTATCTGGCCTGTTTaGGAAAGTGGTCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDTIWPV*ESGLLP
Trigger: TGGCAACAGACCACTTTCCAAAACAGGCCAGATAGT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTATACTGTTCTGCATTTaGCTGATACTTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: GSSSFVPLLSLGSISASAILFCI*LILVST
Trigger: GGTGGACACAAGTATCAGCAAAATGCAGAACAGTAT...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCATGGGATCCATCCTGTaGATCCCAATTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSMGSIL*IPILLF
Trigger: GAAGAGGAGAATTGGGATCAACAGGATGGATCCCAT...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAATGGGATCCATCCTGTaGATCCCAATTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VLDNIWLLETVQESTAAVMGSIL*IPILLF
Trigger: GAAGAGGAGAATTGGGATCAACAGGATGGATCCCAT...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTATTCTCACTAGAATACCCATCTCCTTCACTCAACGGAGGGACAGCAGTCTTACTTCCTCTTTTTCTCTaGCCACCACCATGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: VFSLEYPSPSLNGGTAVLLPLFL*PPPCKK
Trigger: CTTCTTACATGGTGGTGGCAAGAGAAAAAGAGGAAG...TAAGACTGCTGTCCCTCCGTTGAGTGAAGGAGATGGGTATTCTAGTGAGAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp ACCATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCAAACCCAACCCTCAGTaGTCCGTTCACAGTCCATTT +
Preference number: 5 (lower is better)
Translates to: TIFLFLHRMHARFSFFFSKPNPQ*SVHSPF
Trigger: AAATGGACTGTGAACGGACAACTGAGGGTTGGGTTT...GCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR CAA 90 bp TGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTTCAGAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTT +
Preference number: 5 (lower is better)
Translates to: CHPDPQQRQPMTFQKGLQSLRPA*NNWKYF
Trigger: AAAGTACTTCCAATTATTCAACGCTGGTCTCAGACT...CTGAAGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCCGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: VRVQALDDELGHLFSEYFRNISF*GVSVSA
Trigger: AGCTGACACAGACACTCCCAAGAAACTAATGTTTCG...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGGTTTCACTATCAACTTaGCATTCAGGCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLVSLST*HSGSCC
Trigger: ACAACAGCTGCCTGAATGCAAAGTTGATAGTGAAAC...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGCAACTGTCCAGGAGTTaGGTGGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQQLSRS*VAKSLI
Trigger: TATAAGTGATTTGGCCACCAAACTCCTGGACAGTTG...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GCTCTGCCATCCAGATCCACAACAAAGACAGCCCATGACGTTCCAGAAAGGACTCAGTTTGACTTTTCTTaGGAATTCGATATACCTCCT +
Preference number: 5 (lower is better)
Translates to: ALPSRSTTKTAHDVPERTQFDFS*EFDIPP
Trigger: AGGAGGTATATCGAATTCCAAAGAAAAGTCAAACTG...AGTCCTTTCTGGAACGTCATGGGCTGTCTTTGTTGTGGATCTGGATGGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCCCTTCCTCGTTCAGTaGTTGTGTTTTCCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLPFLVQ*LCFPFQ
Trigger: CTGAAAAGGAAAACACAACAACTGAACGAGGAAGGG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTCTGCATCTGTTGCTGTaGTTTCTGAGCCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFLHLLL*FLSLPL
Trigger: CAACGGGAGGCTCAGAAACAACAGCAACAGATGCAG...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCATAACTCTGTACAATaGGTGGAGTTGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCHNSVQ*VELSVN
Trigger: ATTCACAGACAACTCCACCAATTGTACAGAGTTATG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTGGATATACTGAAGACTaGGCTGGGCATAACTCTGTA +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLGYTED*AGHNSV
Trigger: TACAGAGTTATGCCCAGCCAAGTCTTCAGTATATCC...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCCTGTACCACCACTCCTaGTGGATGAGCTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSLYHHS*WMSCEN
Trigger: ATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAG...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGTTGTGGTAATTCTTCCCACTTTGCAGTCAGGTTTCCGGTAAGGGTTCAGGCAAGATGGAGTTCATTTTaGTGGCCTTCAGTTGACATC +
Preference number: 5 (lower is better)
Translates to: SCGNSSHFAVRFPVRVQARWSSF*WPSVDI
Trigger: GATGTCAACTGAAGGCCACAAAAATGAACTCCATCT...TGCCTGAACCCTTACCGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTGTACAGCTGGAGGGTTaGGAGTATCACTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLVQLEG*EYHFAF
Trigger: AAAAGCAAAGTGATACTCCAAACCCTCCAGCTGTAC...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS TCA 90 bp AGCCAACAGCATCCCTTCCTCGTTCAGTTGCAACAGTTCATATTCTaGCTCTGCACCTTAGAATATGTGAGGCAGACAAGTCATTCCATT +
Preference number: 5 (lower is better)
Translates to: SQQHPFLVQLQQFIF*LCTLEYVRQTSHSI
Trigger: AATGGAATGACTTGTCTGCCTCACATATTCTAAGGTGCAGAGTCAGAATATGAACTGTTGCAACTGAACGAGGAAGGGATGCTGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445387.5
CDS CCA 90 bp CTTGCAAACATTTCCCAGATAACCCATTATTACGCCTGTTCTCCCTaGAAGCAAATCCCTTTCCTGAATCAGGAAGGTCACTACCTACTT +
Preference number: 5 (lower is better)
Translates to: LANISQITHYYACSP*KQIPFLNQEGHYLL
Trigger: AAGTAGGTAGTGACCTTCCTGATTCAGGAAAGGGATTTGCTTCCAGGGAGAACAGGCGTAATAATGGGTTATCTGGGAAATGTTTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAGATGAGGTACGCCTaGAGTATGTCTTCTTATACT +
Preference number: 5 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALEMRYA*SMSSYT
Trigger: AGTATAAGAAGACATACTCAAGGCGTACCTCATCTC...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp TTGGTGTACTACACCATCACTCTGGGCCACATACTGGGAACTGGAAACTTCCACAGTTTTGAAGAATACTaGCCTCTTCTTTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: LVYYTITLGHILGTGNFHSFEEY*PLLSIS
Trigger: AGAGATGGAAAGAAGAGGCAAGTATTCTTCAAAACT...GTGGAAGTTTCCAGTTCCCAGTATGTGGCCCAGAGTGATGGTGTAGTACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCGGAATTCCCTTCTTCTaGAGCCTCTTGCAAACATTT +
Preference number: 5 (lower is better)
Translates to: VRVQALDDELGHLFSEYFGIPFF*SLLQTF
Trigger: AAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTCC...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTGGAATTCCCTTCTTCTaGAGCCTCTTGCAAACATTT +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLGIPFF*SLLQTF
Trigger: AAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTCC...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp CACCCTGGCCCAACAGTCACTCTAATTCAGTGTCCTCTTTGGGTTTGTAAACAGATAGTGTCTATAACTTaGACTGCTCCGAGAAGAACA +
Preference number: 5 (lower is better)
Translates to: HPGPTVTLIQCPLWVCKQIVSIT*TAPRRT
Trigger: TGTTCTTCTCGGAGCAGTCAAAGTTATAGACACTAT...CTGTTTACAAACCCAAAGAGGACACTGAATTAGAGTGACTGTTGGGCCAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TGCATTCAGGCAGCTGTTGTGGGAGTAGCTGTTGTGACTGCAATTCTTCCTCTTCATACAAATGTCTCCTaGACTCCAATCTCTCATCTT +
Preference number: 5 (lower is better)
Translates to: CIQAAVVGVAVVTAILPLHTNVS*TPISHL
Trigger: AAGATGAGAGATTGGAGTCAAGGAGACATTTGTATG...AAGAGGAAGAATTGCAGTCACAACAGCTACTCCCACAACAGCTGCCTGAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCCAGGCGATTATCTATTaGTTTTCTACTGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGQAIIY*FSTGLC
Trigger: ACACAGTCCAGTAGAAAACAAATAGATAATCGCCTG...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGGTGTCCTTAATGGAATaGCTGCTTATTTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQVSLME*LLISGA
Trigger: AGCACCTGAAATAAGCAGCAATTCCATTAAGGACAC...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTACATGCTATTTCACCTaGAGCTCTTTCATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCTCYFT*SSFIFR
Trigger: TCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGT...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACCTTCTAGCTCACTGGTaGCATCAGAGATTGCACTGT +
Preference number: 5 (lower is better)
Translates to: IALQVLRILTVLQLLIHNLLAHW*HQRLHC
Trigger: ACAGTGCAATCTCTGATGCAACCAGTGAGCTAGAAG...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCTCCTCTTTGCCATCCTaGCCTTCTAGCTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGSSLPS*PSSSLV
Trigger: AACCAGTGAGCTAGAAGGCAAGGATGGCAAAGAGGA...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTCTAGTTTTGTGCCGTaGCTCTCTTTGGGCTCTATT +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDSSFVP*LSLGSI
Trigger: AATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACTTTATCTGGCTGTTCTaGGCTCCTTTCACTCTCCAC +
Preference number: 5 (lower is better)
Translates to: IALQVLRILTVLQLLIHNFIWLF*APFTLH
Trigger: GTGGAGAGTGAAAGGAGCCAAGAACAGCCAGATAAA...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGGTCTGTCAGTTTGACTTTTCTTaGGAATTCGATATACCTCCT +
Preference number: 5 (lower is better)
Translates to: IIQIIRVKGCGWGCAWVCQFDFS*EFDIPP
Trigger: AGGAGGTATATCGAATTCCAAAGAAAAGTCAAACTG...ACAGACCCATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTACTCTTTATTTTGAGTTaGCTTGTCTGGGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALLFILS*LVWVSL
Trigger: GAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAG...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp TCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATGGTTTTTGCCTTTTCTCTTTATTTaGAGTTTGCTTGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SLLDLELSSSWEVRQWFLPFLFI*SLLVWV
Trigger: GACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGG...CAAAAACCATTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAAGAGGATAATATATGGTTGCTaGAGACTGTGCAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: VYHICHLAFLFPAHRQKRIIYGC*RLCRRV
Trigger: TACTCTCCTGCACAGTCTCAAGCAACCATATATTAT...CCTCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GGTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTGGACATGTCTGTCCTaGATAATATATGGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: GFHHMLEFPGPSQLHAQGWTCLS*IIYGCL
Trigger: CAAGCAACCATATATTATCAAGGACAGACATGTCCA...GCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCACGGGATATACTGAAGACTaGGCTGGGCATAACTCTGTA +
Preference number: 5 (lower is better)
Translates to: IFLFLHRMHARFSFFFSTGYTED*AGHNSV
Trigger: TACAGAGTTATGCCCAGCCAAGTCTTCAGTATATCC...CGTGCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS-3UTR CAA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCGGATATACTGAAGACTaGGCTGGGCATAACTCTGTA +
Preference number: 5 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFGYTED*AGHNSV
Trigger: TACAGAGTTATGCCCAGCCAAGTCTTCAGTATATCC...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATAGCTGTGAAAATCTGTaGCCCCTGGATATACTGAAG +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDSCENL*PLDILK
Trigger: CTTCAGTATATCCAGGGGCAACAGATTTTCACAGCT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTTTTGTGGCCTTCAGTaGACATCTGCAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSFCGLQ*TSAGLN
Trigger: ATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTAGATGGAGTTCATTTTaGTGGCCTTCAGTTGACATC +
Preference number: 5 (lower is better)
Translates to: VFIICWSSQVHLSFMLKARWSSF*WPSVDI
Trigger: GATGTCAACTGAAGGCCACAAAAATGAACTCCATCT...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCTAGAAGCAACACCTTaGAACATTGGTCCTTTGATG +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLLEATP*NIGPLM
Trigger: CATCAAAGGACCAATGTTCAAAGGTGTTGCTTCTAG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS TCA 90 bp TCTGGTCTTCCTCTTCTTTCAGGCAATATGGAATTCCCTTCTTCTTaGGCCTCTTGCAAACATTTCCCAGATAACCCATTATTACGCCTG +
Preference number: 5 (lower is better)
Translates to: SGLPLLSGNMEFPSS*ASCKHFPDNPLLRL
Trigger: CAGGCGTAATAATGGGTTATCTGGGAAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTCCATATTGCCTGAAAGAAGAGGAAGACCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CCA 90 bp TCTTCCATGGGCAAAGTAGAATTCTTTGGCACAACCACAACAGACTaGAGACGGTTTCTTGGAATACTGCTATCATCCGAATCTGTATCT +
Preference number: 5 (lower is better)
Translates to: SSMGKVEFFGTTTTD*RRFLGILLSSESVS
Trigger: AGATACAGATTCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCCCATGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CCA 90 bp AGAAGAACAAGGACTTGTTTCTTCCATGGGCAAAGTAGAATTCTTTaGCACAACCACAACAGACTGGAGACGGTTTCTTGGAATACTGCT +
Preference number: 5 (lower is better)
Translates to: RRTRTCFFHGQSRIL*HNHNRLETVSWNTA
Trigger: AGCAGTATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCCCATGGAAGAAACAAGTCCTTGTTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAGGTAGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCGCGGTGAGTCTACAGTaGTTGATTCTGCTATCACTG +
Preference number: 5 (lower is better)
Translates to: VGSLLASMLVSLSTLHSGAVSLQ*LILLSL
Trigger: CAGTGATAGCAGAATCAACAACTGTAGACTCACCGC...GCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCTACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330022.11
CDS-3UTR CAA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGCCATTAGAACTGTTATaGGTGTATGTGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMPLELL*VYVARP
Trigger: TGGCCTTGCCACATACACCAATAACAGTTCTAATGG...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000409792.4
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTCATGTGATCTTTGACTaGAAGAAGTCCGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLHVIFD*KKSVQN
Trigger: ATTCTGTACGGACTTCTTCAAGTCAAAGATCACATG...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GTTTTCATCATATGTTGGAGTTCCCAGGTCCATCTCAGCTTCATGCTCAAGGCTCATGTGATCTTTGACTaGAAGAAGTCCGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: VFIICWSSQVHLSFMLKAHVIFD*KKSVQN
Trigger: ATTCTGTACGGACTTCTTCAAGTCAAAGATCACATG...AGCCTTGAGCATGAAGCTGAGATGGACCTGGGAACTCCAACATATGATGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATAATCATTTAATCGATTaGATGGAGCTGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDNHLID*MELETQ
Trigger: CTGGGTCTCCAGCTCCATCAAATCGATTAAATGATT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGGAAAGCATGCATGCTTaGACCAAAGGGGATAATTCC +
Preference number: 5 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMESMHA*TKGDNS
Trigger: GGAATTATCCCCTTTGGTCAAAGCATGCATGCTTTC...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTACCTACTTCTACTATaGTTTCTTTCCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLYLLLL*FLSLHA
Trigger: AGCATGCAGGGAAAGAAACAATAGTAGAAGTAGGTA...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTACTGGAGACGGTTTCTaGGAATACTGCTATCATCCG +
Preference number: 5 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFTGDGF*EYCYHP
Trigger: CGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGT...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGGAAAAACTTATCAGTTaGAGGACAGGCTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQEKLIS*RTGFTC
Trigger: GCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTTC...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAATCACATCTGTATGACTaGTACTATCAACCCCATCAC +
Preference number: 5 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQSHLYD*YYQPHH
Trigger: GTGATGGGGTTGATAGTACAAGTCATACAGATGTGA...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATATCTGGTACTTGTCCTaGAGTTCGATCATACACAAC +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDIWYLS*SSIIHN
Trigger: GTTGTGTATGATCGAACTCAAGGACAAGTACCAGAT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GGTTCTTCTAGTTTTGTGCCGTTGCTCTCTTTGGGCTCTATTTCAGCGTCAGCTACATGCTATTTCACCTaGAGCTCTTTCATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: GSSSFVPLLSLGSISASATCYFT*SSFIFR
Trigger: TCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGT...AGCTGACGCTGAAATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGAAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGAACAATAATCCCCATTaGGACACCGAGAAGAACATT +
Preference number: 5 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQNNNPH*DTEKNI
Trigger: AATGTTCTTCTCGGTGTCCAAATGGGGATTATTGTT...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAAGGGTTCAGGCACTGGACGATGAACTGGGACATCTCTTTTCTGAATACTTCGTTCACAGTCCATTTTaGGGTTTCACAATTTGGTTC +
Preference number: 5 (lower is better)
Translates to: VRVQALDDELGHLFSEYFVHSPF*GFTIWF
Trigger: GAACCAAATTGTGAAACCCAAAAATGGACTGTGAAC...GAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTCCAGTGCCTGAACCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTGGTTGCATCAGAGATaGCACTGTCCATGCTATTTT +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSWLHQR*HCPCYF
Trigger: AAAATAGCATGGACAGTGCAATCTCTGATGCAACCA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAGAGAGACCCTCACCATTTTCCATCAGAGCTTCTAGCTCTCCATCCACTGAATTTCCTCGTTCAGTTGTaGTGTTTTCCTTTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: QRDPHHFPSELLALHPLNFLVQL*CFPFQF
Trigger: AAACTGAAAAGGAAAACACAACAACTGAACGAGGAA...ATTCAGTGGATGGAGAGCTAGAAGCTCTGATGGAAAATGGTGAGGGTCTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ATCAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTATAATATATGGTTGCTaGAGACTGTGCAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: INLINIAQGWPKPQGSLLIIYGC*RLCRRV
Trigger: TACTCTCCTGCACAGTCTCAAGCAACCATATATTAT...AAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCGTACAATTGGTGGAGTaGTCTGTGAATAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSVQLVE*SVNKVM
Trigger: CATCACCTTATTCACAGACAACTCCACCAATTGTAC...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTAGTACAATTGGTGGAGTaGTCTGTGAATAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: VLDNIWLLETVQESTAAVVQLVE*SVNKVM
Trigger: CATCACCTTATTCACAGACAACTCCACCAATTGTAC...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATAGCTGTGAAAATCTGTaGCCCCTGGATATACTGAAG +
Preference number: 5 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDSCENL*PLDILK
Trigger: CTTCAGTATATCCAGGGGCAACAGATTTTCACAGCT...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AATAAATCTTCCCTTCTGGATCTCGAGCTGTCTTCCAGTTGGGAGGTAAGACAACTTCTTTGCTTTTCTTaGCTAGTTCACTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: NKSSLLDLELSSSWEVRQLLCFS*LVHWRC
Trigger: ACACCTCCAGTGAACTAGCAAAGAAAAGCAAAGAAG...TTGTCTTACCTCCCAACTGGAAGACAGCTCGAGATCCAGAAGGGAAGATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS TCA 90 bp GAATTGCTGCTTATTTCAGGTGCTTGCACTGACCCCTTGTCTTTCTaGAGGGATAGAAGAAATTTATCGGACTGGTCTGAAAAATGGGAT +
Preference number: 5 (lower is better)
Translates to: ELLLISGACTDPLSF*RDRRNLSDWSEKWD
Trigger: ATCCCATTTTTCAGACCAGTCCGATAAATTTCTTCTATCCCTTCAGAAAGACAAGGGGTCAGTGCAAGCACCTGAAATAAGCAGCAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS GCA 90 bp GACACCAGAGGTTCTGTTTCTCTAAATGGGCTTTCTGACTTCTTATaGAGCATGCAGGTATCATCCAAGTCTTTTTCTTTGCACCTACTA +
Preference number: 5 (lower is better)
Translates to: DTRGSVSLNGLSDFL*SMQVSSKSFSLHLL
Trigger: TAGTAGGTGCAAAGAAAAAGACTTGGATGATACCTGCATGCTGCATAAGAAGTCAGAAAGCCCATTTAGAGAAACAGAACCTCTGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAAGTTTTGAAGAATACTaGCCTCTTCTTTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALSFEEY*PLLSIS
Trigger: AGAGATGGAAAGAAGAGGCAAGTATTCTTCAAAACT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTTACACAAAGAAGGGTaGCTATCGTTCAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSLHKEG*LSFKVQ
Trigger: CTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACATCAGACACACCCTCCTCTTCATCTTGGGATGGTGTTTCTTCATTAATAGGTGGAATTCCCTTCTTCTaGAGCCTCTTGCAAACATTT +
Preference number: 5 (lower is better)
Translates to: TSDTPSSSSWDGVSSLIGGIPFF*SLLQTF
Trigger: AAATGTTTGCAAGAGGCTCAAGAAGAAGGGAATTCC...ACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTACTGGAGACGGTTTCTaGGAATACTGCTATCATCCG +
Preference number: 5 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLTGDGF*EYCYHP
Trigger: CGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGT...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATATAGTGTCTATAACTTaGACTGCTCCGAGAAGAACA +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDIVSIT*TAPRRT
Trigger: TGTTCTTCTCGGAGCAGTCAAAGTTATAGACACTAT...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATGAAAAACTTATCAGTTaGAGGACAGGCTTTACTTGC +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDEKLIS*RTGFTC
Trigger: GCAAGTAAAGCCTGTCCTCAAACTGATAAGTTTTTC...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp ATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCATAACTCACATCTGTATGACTaGTACTATCAACCCCATCAC +
Preference number: 5 (lower is better)
Translates to: IALQVLRILTVLQLLIHNSHLYD*YYQPHH
Trigger: GTGATGGGGTTGATAGTACAAGTCATACAGATGTGA...GTTATGAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp ACATCAGACACACCCTCCTCTTCATCTTGGGATGGTGTTTCTTCATTAATAGGTATACTGTTCTGCATTTaGCTGATACTTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: TSDTPSSSSWDGVSSLIGILFCI*LILVST
Trigger: GGTGGACACAAGTATCAGCAAAATGCAGAACAGTAT...ACCTATTAATGAAGAAACACCATCCCAAGATGAAGAGGAGGGTGTGTCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGATACTGTTCTGCATTTaGCTGATACTTGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSILFCI*LILVST
Trigger: GGTGGACACAAGTATCAGCAAAATGCAGAACAGTAT...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGCGAAACATTAGTTTCTaGGGAGTGTCTGTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVRNISF*GVSVSA
Trigger: AGCTGACACAGACACTCCCAAGAAACTAATGTTTCG...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TCTGTGAATAAGGTGATGTCACACCATAGACTGTTGGACATGTCTGTCCTTGATCTCTTTATTTTGAGTTaGCTTGTCTGGGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SVNKVMSHHRLLDMSVLDLFILS*LVWVSL
Trigger: GAGAGAGACCCAGACAAGCAAACTCAAAATAAAGAG...ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGACATCACCTTATTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTCCTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACCTTTTCTCTTTATTTaGAGTTTGCTTGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: VLDNIWLLETVQESTAAVPFLFI*SLLVWV
Trigger: GACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGG...TACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CTTGATAATATATGGTTGCTTGAGACTGTGCAGGAGAGTACTGCTGCTGTACACCCTTTTCTCTTTATTTaGAGTTTGCTTGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LDNIWLLETVQESTAAVHPFLFI*SLLVWV
Trigger: GACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGG...GTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCATATATTATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGCTTGATAATATATGGTaGCTTGAGACTGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMLDNIW*LETVQE
Trigger: CTCCTGCACAGTCTCAAGCAACCATATATTATCAAG...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTGGACATGTCTGTCCTaGATAATATATGGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDWTCLS*IIYGCL
Trigger: CAAGCAACCATATATTATCAAGGACAGACATGTCCA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTTCACACCATAGACTGTaGGACATGTCTGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFSHHRL*DMSVLD
Trigger: ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGA...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGTCACACCATAGACTGTaGGACATGTCTGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVSHHRL*DMSVLD
Trigger: ATCAAGGACAGACATGTCCAACAGTCTATGGTGTGA...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGAGCTGTGAAAATCTGTaGCCCCTGGATATACTGAAG +
Preference number: 5 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVSCENL*PLDILK
Trigger: CTTCAGTATATCCAGGGGCAACAGATTTTCACAGCT...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATAGGCAGGATCCAAGAGATTATTaGTCACAACCATTTCAGATG +
Preference number: 5 (lower is better)
Translates to: KLVYHICHLAFLFPAHRQDPRDY*SQPFQM
Trigger: CATCTGAAATGGTTGTGACAAATAATCTCTTGGATC...CTGCCTATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTTGAACATTGGTCCTTaGATGAAACCTGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDLNIGP*MKPVFC
Trigger: GCAGAAAACAGGTTTCATCAAAGGACCAATGTTCAA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CAA 90 bp CAATCTTATCAACATAGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAAGAGCAATTTCCTTTTaGAGTGGCATCTATTATCTC +
Preference number: 5 (lower is better)
Translates to: QSYQHSTRLAKTTRQPALRAISF*SGIYYL
Trigger: GAGATAATAGATGCCACTCAAAAAGGAAATTGCTCT...TAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCTATGTTGATAAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS-3UTR CAA 90 bp ATCTTCCTGTTTCTTCACAGAATGCACGCTAGGTTCTCGTTTTTCTTCAGCACGTTCTTCAGCACGAAGTaGGAAATGGAGTTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: IFLFLHRMHARFSFFFSTFFSTK*EMELRK
Trigger: TTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAA...CGTGCTGAAGAAAAACGAGAACCTAGCGTGCATTCTGTGAAGAAACAGGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431180.5
CDS TCA 90 bp AGAAGAAATTTATCGGACTGGTCTGAAAAATGGGATCCATCCTGTTaGTCCCAATTCTCCTCTTCTTCACGATCATCTGTTAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: RRNLSDWSEKWDPSC*SQFSSSSRSSVRES
Trigger: AGATTCCCTAACAGATGATCGTGAAGAAGAGGAGAATTGGGATCAACAGGATGGATCCCATTTTTCAGACCAGTCCGATAAATTTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS GCA 90 bp TCTTTGGCACAACCACAACAGACTGGAGACGGTTTCTTGGAATACTaGTATCATCCGAATCTGTATCTTCTGAATCACTTTCATCATTTG +
Preference number: 5 (lower is better)
Translates to: SLAQPQQTGDGFLEY*YHPNLYLLNHFHHL
Trigger: CAAATGATGAAAGTGATTCAGAAGATACAGATTCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGTGCCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp AGCTTACTAGCTTCTATGTTGGTTTCACTATCAACTTTGCATTCAGGCAGCTGTATCTGGTACTTGTCCTaGAGTTCGATCATACACAAC +
Preference number: 5 (lower is better)
Translates to: SLLASMLVSLSTLHSGSCIWYLS*SSIIHN
Trigger: GTTGTGTATGATCGAACTCAAGGACAAGTACCAGAT...ACAGCTGCCTGAATGCAAAGTTGATAGTGAAACCAACATAGAAGCTAGTAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CTCAAACAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGGTTCACAGTCCATTTTaGGGTTTCACAATTTGGTTC +
Preference number: 5 (lower is better)
Translates to: LKQLPAFLCRKFIAVFNSVHSPF*GFTIWF
Trigger: GAACCAAATTGTGAAACCCAAAAATGGACTGTGAAC...CGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTGTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTTCTAGTTTTGTGCCGTaGCTCTCTTTGGGCTCTATT +
Preference number: 5 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLSSFVP*LSLGSI
Trigger: AATAGAGCCCAAAGAGAGCAACGGCACAAAACTAGA...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTCTCATTGCACTCCAGGTCCTCAGGATTCTTACAGTACTTCAGCTCCTTATTCCAGTTTGACTTTTCTTaGGAATTCGATATACCTCCT +
Preference number: 5 (lower is better)
Translates to: FSLHSRSSGFLQYFSSLFQFDFS*EFDIPP
Trigger: AGGAGGTATATCGAATTCCAAAGAAAAGTCAAACTG...GAATAAGGAGCTGAAGTACTGTAAGAATCCTGAGGACCTGGAGTGCAATGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GTAGATGGAGTTCATTTTTGTGGCCTTCAGTTGACATCTGCAGGGTTGAATTCCTTCCTCGTTCAGTTGTaGTGTTTTCCTTTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: VDGVHFCGLQLTSAGLNSFLVQL*CFPFQF
Trigger: AAACTGAAAAGGAAAACACAACAACTGAACGAGGAA...GGAATTCAACCCTGCAGATGTCAACTGAAGGCCACAAAAATGAACTCCATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp AGCACAAGGCTGGCCAAAACCACAAGGCAGCCTGCTTTAGAATATTTACATGATTTCCTCGTTCAGTTGTaGTGTTTTCCTTTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: STRLAKTTRQPALEYLHDFLVQL*CFPFQF
Trigger: AAACTGAAAAGGAAAACACAACAACTGAACGAGGAA...ATCATGTAAATATTCTAAAGCAGGCTGCCTTGTGGTTTTGGCCAGCCTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS-3UTR CAA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGCCTTTTCTCTTTATTTaGAGTTTGCTTGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMPFLFI*SLLVWV
Trigger: GACCCAGACAAGCAAACTCAAAATAAAGAGAAAAGG...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTGTACAATTGGTGGAGTaGTCTGTGAATAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFVQLVE*SVNKVM
Trigger: CATCACCTTATTCACAGACAACTCCACCAATTGTAC...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTAAAATATAATACAGATCATCAGGGTAAAGGGTTGTGGGTGGGGATGCGCATGCATAACTCTGTACAATaGGTGGAGTTGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LKYNTDHQGKGLWVGMRMHNSVQ*VELSVN
Trigger: ATTCACAGACAACTCCACCAATTGTACAGAGTTATG...CATGCGCATCCCCACCCACAACCCTTTACCCTGATGATCTGTATTATATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
ENST00000445387.5
CDS TCA 90 bp GTTACACAAAGAAGGGTTGCTATCGTTCAAAGTACAGTATATGTCTaGATCTTTGGTTTTGCAGCAAGAAACCCTCGTATCAACTGGTTC +
Preference number: 5 (lower is better)
Translates to: VTQRRVAIVQSTVYV*IFGFAARNPRINWF
Trigger: GAACCAGTTGATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGACATATACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS GCA 90 bp GTATCACTTTGCTTTTCATTGCCAAGTGCAGTGAGAAACCTATTCTaGAAAGTTTTCTTTGTAAGGCTGAAGCTGAATGACACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: VSLCFSLPSAVRNLF*KVFFVRLKLNDTFC
Trigger: ACAGAAGGTGTCATTCAGCTTCAGCCTTACAAAGAAAACTTTGCAGAATAGGTTTCTCACTGCACTTGGCAATGAAAAGCAAAGTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000412450.1
CDS CCA 90 bp ACTATCTGGCCTGTTTTGGAAAGTGGTCTGTTGCCAAGACTTATTTaGGACATCTTCAAAATCAGAAGAATAAATTGGCAGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TIWPVLESGLLPRLI*DIFKIRRINWQLFL
Trigger: CAAGAAGAGCTGCCAATTTATTCTTCTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAAAACAGGCCAGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp CAACTTCCGGCGTTCCTCTGTAGAAAGTTTATTGCGGTCTTTAATTCGTACTTTCATGTGATCTTTGACTaGAAGAAGTCCGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: QLPAFLCRKFIAVFNSYFHVIFD*KKSVQN
Trigger: ATTCTGTACGGACTTCTTCAAGTCAAAGATCACATG...AAAGTACGAATTAAAGACCGCAATAAACTTTCTACAGAGGAACGCCGGAAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ACTGGTTGCATCAGAGATTGCACTGTCCATGCTATTTTCACTTATAATTTTCAGTTGGAAAGTGGTCTGTaGCCAAGACTTATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: TGCIRDCTVHAIFTYNFQLESGL*PRLIWD
Trigger: GTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAA...CTGAAAATTATAAGTGAAAATAGCATGGACAGTGCAATCTCTGATGCAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp CATAGACTGTTGGACATGTCTGTCCTTGATAATATATGGTTGCTTGAGACTGTGAACAATAATCCCCATTaGGACACCGAGAAGAACATT +
Preference number: 5 (lower is better)
Translates to: HRLLDMSVLDNIWLLETVNNNPH*DTEKNI
Trigger: AATGTTCTTCTCGGTGTCCAAATGGGGATTATTGTT...CACAGTCTCAAGCAACCATATATTATCAAGGACAGACATGTCCAACAGTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTCAACTGTCCAGGAGTTaGGTGGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSQLSRS*VAKSLI
Trigger: TATAAGTGATTTGGCCACCAAACTCCTGGACAGTTG...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTAGCTGTGAAAATCTGTaGCCCCTGGATATACTGAAG +
Preference number: 5 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSSCENL*PLDILK
Trigger: CTTCAGTATATCCAGGGGCAACAGATTTTCACAGCT...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS TCA 90 bp TTTTTGTTTCGTGCATACTCCTTCACTCGAGCTTTAAACTCTTTATaGTCGAGTACCTCTCCACAATATTCTAGGACAAAGGTGTTCGAA +
Preference number: 5 (lower is better)
Translates to: FLFRAYSFTRALNSL*SSTSPQYSRTKVFE
Trigger: TTCGAACACCTTTGTCCTAGAATATTGTGGAGAGGTACTCGATCATAAAGAGTTTAAAGCTCGAGTGAAGGAGTATGCACGAAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409792.4
ENST00000445387.5
ENST00000638947.1
CDS-3UTR CAA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTAGTCTGAGACCAGCGTaGAATAATTGGAAGTACTTT +
Preference number: 5 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLSLRPA*NNWKYF
Trigger: AAAGTACTTCCAATTATTCAACGCTGGTCTCAGACT...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TTTGGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTAATGTACTCCTTATAATATATGGTTGCTaGAGACTGTGCAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: FGFVNSPKLLHVLLNVLLIIYGC*RLCRRV
Trigger: TACTCTCCTGCACAGTCTCAAGCAACCATATATTAT...AAGGAGTACATTAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTCTTGATAATATATGGTaGCTTGAGACTGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSLDNIW*LETVQE
Trigger: CTCCTGCACAGTCTCAAGCAACCATATATTATCAAG...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp ACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTCCATAACTCTGTACAATaGGTGGAGTTGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: TLLSSNIFLVGMGKCSKVHNSVQ*VELSVN
Trigger: ATTCACAGACAACTCCACCAATTGTACAGAGTTATG...GACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS GCA 90 bp CTGAAGGCTCAATATTTTCAGCTTCAGAGTTACACAAAGAAGGGTTaGTATCGTTCAAAGTACAGTATATGTCTGAATCTTTGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LKAQYFQLQSYTKKG*YRSKYSICLNLWFC
Trigger: GCAAAACCAAAGATTCAGACATATACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAACTCTGAAGCTGAAAATATTGAGCCTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS GCA 90 bp ATCATTCTTCAGGGCCATGAAATAGTAATGGATGTTTTTGTTTCGTaGATACTCCTTCACTCGAGCTTTAAACTCTTTATGATCGAGTAC +
Preference number: 5 (lower is better)
Translates to: IILQGHEIVMDVFVS*ILLHSSFKLFMIEY
Trigger: GTACTCGATCATAAAGAGTTTAAAGCTCGAGTGAAGGAGTATGCACGAAACAAAAACATCCATTACTATTTCATGGCCCTGAAGAATGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409792.4
ENST00000445387.5
ENST00000638947.1
CDS-3UTR CAA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTAACAATAATCCCCATTaGGACACCGAGAAGAACATT +
Preference number: 5 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSNNNPH*DTEKNI
Trigger: AATGTTCTTCTCGGTGTCCAAATGGGGATTATTGTT...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp TACTTTGCTTTCCTCCAACATATTTTTAGTAGGAATGGGCAAGTGTTCCAAAGTATAATATATGGTTGCTaGAGACTGTGCAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: YFAFLQHIFSRNGQVFQSIIYGC*RLCRRV
Trigger: TACTCTCCTGCACAGTCTCAAGCAACCATATATTAT...ACTTTGGAACACTTGCCCATTCCTACTAAAAATATGTTGGAGGAAAGCAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330022.11
ENST00000431180.5
CDS-3UTR CAA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTATAGTGTCTATAACTTaGACTGCTCCGAGAAGAACA +
Preference number: 5 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPIVSIT*TAPRRT
Trigger: TGTTCTTCTCGGAGCAGTCAAAGTTATAGACACTAT...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS TCA 90 bp GTGCTACCGATGCTCTGCTTATATTCTTCACATGCAAATTTTGAGTaGTCTGTCAAATTTCTACTATCACATATAACTGGTTTTGATTCC +
Preference number: 5 (lower is better)
Translates to: VLPMLCLYSSHANFE*SVKFLLSHITGFDS
Trigger: GGAATCAAAACCAGTTATATGTGATAGTAGAAATTTGACAGATCACTCAAAATTTGCATGTGAAGAATATAAGCAGAGCATCGGTAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS-3UTR CAA 90 bp GATAACAAATTAAACCTTGCAGGAGAACTTAAACTGTCCTTACAAAGTCTTCCTACATGCTATTTCACCTaGAGCTCTTTCATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: DNKLNLAGELKLSLQSLPTCYFT*SSFIFR
Trigger: TCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGT...AGGAAGACTTTGTAAGGACAGTTTAAGTTCTCCTGCAAGGTTTAATTTGTTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000431180.5
CDS CAA 72 bp CGGGCCCGGCACCGGCAGCTCCTCCGACTCTGCCCTTaGGCTAGCAGCGGGGCCCGGACGAGCCACGAGGAG +
Preference number: 6 (lower is better)
Translates to: RARHRQLLRLCP*ASSGARTSHEE
Trigger: CTCCTCGTGGCTCGTCCGGGCCCCGCTGCTAGCCAAAGGGCAGAGTCGGAGGAGCTGCCGGTGCCGGGCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412450.1
CDS GCA 72 bp AAATCCCCCATCTTCGGAGGCGGCTGCGGCTGCAGCTaGTTCATCGGGAGCGGCTGGAGACGGCGACGCGAG +
Preference number: 6 (lower is better)
Translates to: KSPIFGGGCGCS*FIGSGWRRRRE
Trigger: CTCGCGTCGCCGTCTCCAGCCGCTCCCGATGAAGCAGCTGCAGCCGCAGCCGCCTCCGAAGATGGGGGATTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409792.4
CDS CAA 72 bp GCGGTGGAGGCGGAGATGAGGGCGGTGAGTCTACAGTaGTTGATTCTGCTATCACTGCTGGTAATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: AVEAEMRAVSLQ*LILLSLLVMVL
Trigger: CAGCACCATTACCAGCAGTGATAGCAGAATCAACAACTGTAGACTCACCGCCCTCATCTCCGCCTCCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
CDS CAA 72 bp GTGGAGGCGGAGATGAGGGCGGTGAGTCTACAGTTGTaGATTCTGCTATCACTGCTGGTAATGGTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: VEAEMRAVSLQL*ILLSLLVMVLH
Trigger: ATGCAGCACCATTACCAGCAGTGATAGCAGAATCAACAACTGTAGACTCACCGCCCTCATCTCCGCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
CDS CAA 90 bp GAGTTCGATCATACACAACCCCAGTTCCAGGAGGTCTACCTGATCTaGGATCCCAGTAACCATTGCCTTGCCAGTAATCACGTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: EFDHTQPQFQEVYLI*DPSNHCLASNHVSH
Trigger: GTGGGACACGTGATTACTGGCAAGGCAATGGTTACTGGGATCCAAGATCAGGTAGACCTCCTGGAACTGGGGTTGTGTATGATCGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp GTTGATTCTGCTATCACTGCTGGTAATGGTGCTGCATaGGTAGGTGGAGATGCTACTGCTGTGGTAGTAGCC +
Preference number: 6 (lower is better)
Translates to: VDSAITAGNGAA*VGGDATAVVVA
Trigger: GGCTACTACCACAGCAGTAGCATCTCCACCTACTCATGCAGCACCATTACCAGCAGTGATAGCAGAATCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
CDS TCA 72 bp CCTAGAGTGAGATCTGCTCCGCCGTCGCTCTCTTTCTaGTCTACATCGGGAAGATACATACCGAGTATCTCT +
Preference number: 6 (lower is better)
Translates to: PRVRSAPPSLSF*STSGRYIPSIS
Trigger: AGAGATACTCGGTATGTATCTTCCCGATGTAGATCAGAAAGAGAGCGACGGCGGAGCAGATCTCACTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp TCGATCATACACAACCCCAGTTCCAGGAGGTCTACCTaGTCTTGGATCCCAGTAACCATTGCCTTGCCAGTA +
Preference number: 6 (lower is better)
Translates to: SIIHNPSSRRST*SWIPVTIALPV
Trigger: TACTGGCAAGGCAATGGTTACTGGGATCCAAGATCAGGTAGACCTCCTGGAACTGGGGTTGTGTATGATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp CTGGTAAGGGTACTGGTGCTGCCATTAGAACTGTTATaGGTGTATGTGGCAAGGCCACTGGCTCTGTTACTG +
Preference number: 6 (lower is better)
Translates to: LVRVLVLPLELL*VYVARPLALLL
Trigger: CAGTAACAGAGCCAGTGGCCTTGCCACATACACCAATAACAGTTCTAATGGCAGCACCAGTACCCTTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
CDS CAA 72 bp CATACACAACCCCAGTTCCAGGAGGTCTACCTGATCTaGGATCCCAGTAACCATTGCCTTGCCAGTAATCAC +
Preference number: 6 (lower is better)
Translates to: HTQPQFQEVYLI*DPSNHCLASNH
Trigger: GTGATTACTGGCAAGGCAATGGTTACTGGGATCCAAGATCAGGTAGACCTCCTGGAACTGGGGTTGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp GGCTGGCTGTACCACCACTCCTTGTGGATGAGCTGTGAAAATCTGTaGCCCCTGGATATACTGAAGACTTGGCTGGGCATAACTCTAAAA +
Preference number: 6 (lower is better)
Translates to: GWLYHHSLWMSCENL*PLDILKTWLGITLK
Trigger: TTTTAGAGTTATGCCCAGCCAAGTCTTCAGTATATCCAGGGGCAACAGATTTTCACAGCTCATCCACAAGGAGTGGTGGTACAGCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479832.1
CDS CAA 90 bp TTGCTGATACTTGTGTCCACCACAAGCTCCATAGCTACTGTCAGGTaGCTGATACGTGGTAGAAGGCTTTTCTTGAGAGAAGTCCCAACC +
Preference number: 6 (lower is better)
Translates to: LLILVSTTSSIATVR*LIRGRRLFLREVPT
Trigger: GGTTGGGACTTCTCTCAAGAAAAGCCTTCTACCACGTATCAGCAACCTGACAGTAGCTATGGAGCTTGTGGTGGACACAAGTATCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp ATTGCCTTGCCAGTAATCACGTGTCCCACCATACTGTTCTGCATTTaGCTGATACTTGTGTCCACCACAAGCTCCATAGCTACTGTCAGG +
Preference number: 6 (lower is better)
Translates to: IALPVITCPTILFCI*LILVSTTSSIATVR
Trigger: CCTGACAGTAGCTATGGAGCTTGTGGTGGACACAAGTATCAGCAAAATGCAGAACAGTATGGTGGGACACGTGATTACTGGCAAGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp GATAAATTAGTTCTAGAGCCTCTCTCAGACCTAGAGTaGGATCTGCTCCGCCGTCGCTCTCTTTCTGATCTA +
Preference number: 6 (lower is better)
Translates to: DKLVLEPLSDLE*DLLRRRSLSDL
Trigger: TAGATCAGAAAGAGAGCGACGGCGGAGCAGATCTCACTCTAGGTCTGAGAGAGGCTCTAGAACTAATTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CCA 72 bp AGGTGGAGATGCTACTGCTGTGGTAGTAGCCAGCAGTaGCCTGGATGTTACATGAAGCAGATGTTTCTTAAA +
Preference number: 6 (lower is better)
Translates to: RWRCYCCGSSQQ*PGCYMKQMFLK
Trigger: TTTAAGAAACATCTGCTTCATGTAACATCCAGGCCACTGCTGGCTACTACCACAGCAGTAGCATCTCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
CDS CAA 72 bp CTTGTGTCCACCACAAGCTCCATAGCTACTGTCAGGTaGCTGATACGTGGTAGAAGGCTTTTCTTGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LVSTTSSIATVR*LIRGRRLFLRE
Trigger: TTCTCTCAAGAAAAGCCTTCTACCACGTATCAGCAACCTGACAGTAGCTATGGAGCTTGTGGTGGACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp CCAGTAATCACGTGTCCCACCATACTGTTCTGCATTTaGCTGATACTTGTGTCCACCACAAGCTCCATAGCT +
Preference number: 6 (lower is better)
Translates to: PVITCPTILFCI*LILVSTTSSIA
Trigger: AGCTATGGAGCTTGTGGTGGACACAAGTATCAGCAAAATGCAGAACAGTATGGTGGGACACGTGATTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp CTGAATTTGGGTGACCCAGAGGGTCAGATTTCACATCTGTATGACTaGTACTATCAACCCCATCACTCTGAGGATGAGAAAGTTCAGGCA +
Preference number: 6 (lower is better)
Translates to: LNLGDPEGQISHLYD*YYQPHHSEDEKVQA
Trigger: TGCCTGAACTTTCTCATCCTCAGAGTGATGGGGTTGATAGTACAAGTCATACAGATGTGAAATCTGACCCTCTGGGTCACCCAAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp AAGGCTTTTCTTGAGAGAAGTCCCAACCTAAGTTTCTaGGCTCTTCTGATGAGTGCAAGCCATCCACATGTG +
Preference number: 6 (lower is better)
Translates to: KAFLERSPNLSF*ALLMSASHPHV
Trigger: CACATGTGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACTTAGGTTGGGACTTCTCTCAAGAAAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CCA 72 bp CATTTTAGGAGTCGAGTCTACCTGAAGAGGTACAGCTaGAGGGTTTGGAGTATCACTTTGCTTTTCATTGCC +
Preference number: 6 (lower is better)
Translates to: HFRSRVYLKRYS*RVWSITLLFIA
Trigger: GGCAATGAAAAGCAAAGTGATACTCCAAACCCTCCAGCTGTACCTCTTCAGGTAGACTCGACTCCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000412450.1
CDS CAA 72 bp GGTGACCCAGAGGGTCAGATTTCACATCTGTATGACTaGTACTATCAACCCCATCACTCTGAGGATGAGAAA +
Preference number: 6 (lower is better)
Translates to: GDPEGQISHLYD*YYQPHHSEDEK
Trigger: TTTCTCATCCTCAGAGTGATGGGGTTGATAGTACAAGTCATACAGATGTGAAATCTGACCCTCTGGGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp ATTACGCCTGTTCTCCCTGGAAGCAAATCCCTTTCCTaGATCAGGAAGGTCACTACCTACTTCTACTATTGT +
Preference number: 6 (lower is better)
Translates to: ITPVLPGSKSLS*IRKVTTYFYYC
Trigger: ACAATAGTAGAAGTAGGTAGTGACCTTCCTGATTCAGGAAAGGGATTTGCTTCCAGGGAGAACAGGCGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CCA 72 bp GGCAAAGTAGAATTCTTTGGCACAACCACAACAGACTaGAGACGGTTTCTTGGAATACTGCTATCATCCGAA +
Preference number: 6 (lower is better)
Translates to: GKVEFFGTTTTD*RRFLGILLSSE
Trigger: TTCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp TCTTTGGCACAACCACAACAGACTGGAGACGGTTTCTaGGAATACTGCTATCATCCGAATCTGTATCTTCTG +
Preference number: 6 (lower is better)
Translates to: SLAQPQQTGDGF*EYCYHPNLYLL
Trigger: CAGAAGATACAGATTCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTGTGCCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp CATAACTGGCATAGACATGAGTTTATCTTGGTGTGGTaGCACCAGAGGTTCTGTTTCTCTAAATGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: HNWHRHEFILVW*HQRFCFSKWAF
Trigger: GAAAGCCCATTTAGAGAAACAGAACCTCTGGTGTCACCACACCAAGATAAACTCATGTCTATGCCAGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp TTATCGGACTGGTCTGAAAAATGGGATCCATCCTGTTaGTCCCAATTCTCCTCTTCTTCACGATCATCTGTT +
Preference number: 6 (lower is better)
Translates to: LSDWSEKWDPSC*SQFSSSSRSSV
Trigger: AACAGATGATCGTGAAGAAGAGGAGAATTGGGATCAACAGGATGGATCCCATTTTTCAGACCAGTCCGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp CCAATTTCCATTTTCATTTTAGGAGTCGAGTCTACCTaGAGAGGTACAGCTGGAGGGTTTGGAGTATCACTT +
Preference number: 6 (lower is better)
Translates to: PISIFILGVEST*RGTAGGFGVSL
Trigger: AAGTGATACTCCAAACCCTCCAGCTGTACCTCTTCAGGTAGACTCGACTCCTAAAATGAAAATGGAAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000412450.1
CDS GCA 72 bp CTTCCCAATGGTCAGAATAGTGTCTATAACTTTGACTaGTCCGAGAAGAACAAGGACTTGTTTCTTCCATGG +
Preference number: 6 (lower is better)
Translates to: LPNGQNSVYNFD*SEKNKDLFLPW
Trigger: CCATGGAAGAAACAAGTCCTTGTTCTTCTCGGAGCAGTCAAAGTTATAGACACTATTCTGACCATTGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp GGTCTCTGTAAGAAGAGGAATGAGATGAGGTACGCCTaGAGTATGTCTTCTTATACTCTTCTTCTGAGTCAG +
Preference number: 6 (lower is better)
Translates to: GLCKKRNEMRYA*SMSSYTLLLSQ
Trigger: CTGACTCAGAAGAAGAGTATAAGAAGACATACTCAAGGCGTACCTCATCTCATTCCTCTTCTTACAGAGACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp ACAGCTGGAGGGTTTGGAGTATCACTTTGCTTTTCATaGCCAAGTGCAGTGAGAAACCTATTCTGCAAAGTT +
Preference number: 6 (lower is better)
Translates to: TAGGFGVSLCFS*PSAVRNLFCKV
Trigger: AACTTTGCAGAATAGGTTTCTCACTGCACTTGGCAATGAAAAGCAAAGTGATACTCCAAACCCTCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000412450.1
CDS CAA 90 bp ATGTCCTTAGGTCTCTGTAAGAAGAGGAATGAGATGAGGTACGCCTaGAGTATGTCTTCTTATACTCTTCTTCTGAGTCAGAACTCTCTC +
Preference number: 6 (lower is better)
Translates to: MSLGLCKKRNEMRYA*SMSSYTLLLSQNSL
Trigger: GAGAGAGTTCTGACTCAGAAGAAGAGTATAAGAAGACATACTCAAGGCGTACCTCATCTCATTCCTCTTCTTACAGAGACCTAAGGACAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp CGTGCATACTCCTTCACTCGAGCTTTAAACTCTTTATaGTCGAGTACCTCTCCACAATATTCTAGGACAAAG +
Preference number: 6 (lower is better)
Translates to: RAYSFTRALNSL*SSTSPQYSRTK
Trigger: CTTTGTCCTAGAATATTGTGGAGAGGTACTCGATCATAAAGAGTTTAAAGCTCGAGTGAAGGAGTATGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409792.4
ENST00000445387.5
ENST00000638947.1
CDS GCA 72 bp CAACCACAACAGACTGGAGACGGTTTCTTGGAATACTaGTATCATCCGAATCTGTATCTTCTGAATCACTTT +
Preference number: 6 (lower is better)
Translates to: QPQQTGDGFLEY*YHPNLYLLNHF
Trigger: AAAGTGATTCAGAAGATACAGATTCGGATGATAGCAGTATTCCAAGAAACCGTCTCCAGTCTGTTGTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp CAGTCTACTATCTGGCCTGTTTTGGAAAGTGGTCTGTaGCCAAGACTTATTTGGGACATCTTCAAAATCAGA +
Preference number: 6 (lower is better)
Translates to: QSTIWPVLESGL*PRLIWDIFKIR
Trigger: TCTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAAAACAGGCCAGATAGTAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp CCCATCACTCTGAGGATGAGAAAGTTCAGGCAGGCGATTATCTATTaGTTTTCTACTGGACTGTGTAAAAGAAATTTCCGGATTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PITLRMRKFRQAIIY*FSTGLCKRNFRILL
Trigger: GAGAAGAATCCGGAAATTTCTTTTACACAGTCCAGTAGAAAACAAATAGATAATCGCCTGCCTGAACTTTCTCATCCTCAGAGTGATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp TTAAACAGGTGGACAGTTTCTATAAGCAAAAACCAATaGAGTGCTGCTCCTGGGATATCCAAGAAACAATGC +
Preference number: 6 (lower is better)
Translates to: LNRWTVSISKNQ*SAAPGISKKQC
Trigger: GCATTGTTTCTTGGATATCCCAGGAGCAGCACTTCATTGGTTTTTGCTTATAGAAACTGTCCACCTGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479832.1
CDS GCA 72 bp GGTTCTGTTTCTCTAAATGGGCTTTCTGACTTCTTATaGAGCATGCAGGTATCATCCAAGTCTTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: GSVSLNGLSDFL*SMQVSSKSFSL
Trigger: CAAAGAAAAAGACTTGGATGATACCTGCATGCTGCATAAGAAGTCAGAAAGCCCATTTAGAGAAACAGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp GGGTTGCTATCGTTCAAAGTACAGTATATGTCTGAATCTTTGGTTTaGCAGCAAGAAACCCTCGTATCAACTGGTTCTTTAACTACTGTT +
Preference number: 6 (lower is better)
Translates to: GLLSFKVQYMSESLV*QQETLVSTGSLTTV
Trigger: AACAGTAGTTAAAGAACCAGTTGATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGACATATACTGTACTTTGAACGATAGCAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp TACTATCTGGCCTGTTTTGGAAAGTGGTCTGTTGCCAAGACTTATTaGGGACATCTTCAAAATCAGAAGAATAAATTGGCAGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: YYLACFGKWSVAKTY*GHLQNQKNKLAALL
Trigger: AAGAAGAGCTGCCAATTTATTCTTCTGATTTTGAAGATGTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAAAACAGGCCAGATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp AGAAAAACTCAATTCTGTTTTTCCCAGTCTACTATCTGGCCTGTTTaGGAAAGTGGTCTGTTGCCAAGACTTATTTGGGACATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: RKTQFCFSQSTIWPV*ESGLLPRLIWDIFK
Trigger: TTTGAAGATGTCCCAAATAAGTCTTGGCAACAGACCACTTTCCAAAACAGGCCAGATAGTAGACTGGGAAAAACAGAATTGAGTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS TCA 72 bp TATTCTGAAATCCATTTGATGAAAGCATGCATGCTTTaGCCAAAGGGGATAATTCCGATCCAGTCACACTAT +
Preference number: 6 (lower is better)
Translates to: YSEIHLMKACML*PKGIIPIQSHY
Trigger: ATAGTGTGACTGGATCGGAATTATCCCCTTTGGTCAAAGCATGCATGCTTTCATCAAATGGATTTCAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS GCA 72 bp CAGGGCCATGAAATAGTAATGGATGTTTTTGTTTCGTaGATACTCCTTCACTCGAGCTTTAAACTCTTTATG +
Preference number: 6 (lower is better)
Translates to: QGHEIVMDVFVS*ILLHSSFKLFM
Trigger: CATAAAGAGTTTAAAGCTCGAGTGAAGGAGTATGCACGAAACAAAAACATCCATTACTATTTCATGGCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409792.4
ENST00000445387.5
ENST00000638947.1
CDS CAA 90 bp AAAGAAGGGTTGCTATCGTTCAAAGTACAGTATATGTCTGAATCTTaGGTTTTGCAGCAAGAAACCCTCGTATCAACTGGTTCTTTAACT +
Preference number: 6 (lower is better)
Translates to: KEGLLSFKVQYMSES*VLQQETLVSTGSLT
Trigger: AGTTAAAGAACCAGTTGATACGAGGGTTTCTTGCTGCAAAACCAAAGATTCAGACATATACTGTACTTTGAACGATAGCAACCCTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 90 bp ACTGAAGGCTCAATATTTTCAGCTTCAGAGTTACACAAAGAAGGGTaGCTATCGTTCAAAGTACAGTATATGTCTGAATCTTTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: TEGSIFSASELHKEG*LSFKVQYMSESLVL
Trigger: CAAAACCAAAGATTCAGACATATACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAACTCTGAAGCTGAAAATATTGAGCCTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5
CDS CAA 72 bp AATCGACTAGAAGCAACACCTTTGAACATTGGTCCTTaGATGAAACCTGTTTTCTGCACATTTTCAATCTTT +
Preference number: 6 (lower is better)
Translates to: NRLEATPLNIGP*MKPVFCTFSIF
Trigger: AAAGATTGAAAATGTGCAGAAAACAGGTTTCATCAAAGGACCAATGTTCAAAGGTGTTGCTTCTAGTCGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409792.4
ENST00000412450.1
CDS GCA 72 bp CAATATTTTCAGCTTCAGAGTTACACAAAGAAGGGTTaGTATCGTTCAAAGTACAGTATATGTCTGAATCTT +
Preference number: 6 (lower is better)
Translates to: QYFQLQSYTKKG*YRSKYSICLNL
Trigger: AAGATTCAGACATATACTGTACTTTGAACGATAGCAACCCTTCTTTGTGTAACTCTGAAGCTGAAAATATTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330022.11
ENST00000409792.4
ENST00000412450.1
ENST00000431180.5
ENST00000445387.5