RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD1A (Homo sapiens)

Ensembl gene IDs: ENSG00000099381

Ensembl transcript IDs: ENST00000262519.14, ENST00000452917.3, ENST00000640410.1, ENST00000682768.1, ENST00000684162.1

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTaGTGGCTGCTACAAAACATTTACAGCTTCTTCTCCGCAAAGAAA +
Preference number: 1 (lower is better)
Translates to: QNLYRPAPQVSTGNS*WLLQNIYSFFSAKK
Trigger: TTTCTTTGCGGAGAAGAAGCTGTAAATGTTTTGTAGCAGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACTGAGGCTCCCTCGCTaGGCTTGGGGCCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGLRLPR*AWGPQP
Trigger: GGGTTGGGGGCCCCAAGCCCAGCGAGGGAGCCTCAG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCCAGGGGGAGAACATaGCCACTGCCCCAGAGACCC +
Preference number: 2 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPRGRT*PLPQRP
Trigger: GGGTCTCTGGGGCAGTGGCCATGTTCTCCCCCTGGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCCCCACGCTTGGAGATaGGGGCATGTGGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: QDRICTGRHPRFPQETAAPHAWR*GHVGPA
Trigger: AGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGG...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR TCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCTGCCTCCAGGGACTaGGGCTCCCTCGCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVAASRD*GSLAGL
Trigger: AAGCCCAGCGAGGGAGCCTCAGTCCCTGGAGGCAGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR GCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCAGGAGAGGCAGAAGCTaGCTCCAGGGACTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCRRGRS*LQGLRL
Trigger: GAGCCTCAGTCCCTGGAGGCAGCTTCTGCCTCTCCT...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGGAGATGGGGGCATGTaGGCCCTGCTGAGCCCACTA +
Preference number: 2 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVGDGGM*ALLSPL
Trigger: TAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR GCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATCCACAGGAAACAGCTaGTGGCTGCTACAAAACATT +
Preference number: 2 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTSTGNS*WLLQNI
Trigger: AATGTTTTGTAGCAGCCAGCAGCTGTTTCCTGTGGA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCTCCCTCGCTGGGCTTaGGGCCCCCAACCCCACGCT +
Preference number: 2 (lower is better)
Translates to: IIKMWRRVCAINICTVQPLPRWA*GPQPHA
Trigger: AGCGTGGGGTTGGGGGCCCCAAGCCCAGCGAGGGAG...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGTGACCCTCAGGGTCTaGCAGGAACAGATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: TIIKMWRRVCAINICTVQVTLRV*QEQMRQ
Trigger: CTGCCTCATCTGTTCCTGCCAGACCCTGAGGGTCAC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGAAACAGCTGCTGGCTaGTACAAAACATTTACAGCT +
Preference number: 2 (lower is better)
Translates to: TIIKMWRRVCAINICTVQETAAG*YKTFTA
Trigger: AGCTGTAAATGTTTTGTAGCAGCCAGCAGCTGTTTC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR CCA 72 bp ATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTaGAAGGGTGACCCTCAGGGTCTGGCAGGAACAGAT +
Preference number: 3 (lower is better)
Translates to: ILAWLSRGVTPG*KGDPQGLAGTD
Trigger: ATCTGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR CCA 72 bp AGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTaGCTGCTACAAAACATTTACAGCTTCTTCTCCGCA +
Preference number: 3 (lower is better)
Translates to: RPAPQVSTGNSC*LLQNIYSFFSA
Trigger: TGCGGAGAAGAAGCTGTAAATGTTTTGTAGCAGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
3UTR GCA 72 bp TACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTaGTGGCTGCTACAAAACATTTACAGCTTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: YRPAPQVSTGNS*WLLQNIYSFFS
Trigger: GGAGAAGAAGCTGTAAATGTTTTGTAGCAGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTTTCGCCACAGGCGCTaGCGGGGGACCCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGFRHRR*RGTHGA
Trigger: GGCCCCGTGGGTCCCCCGGCAGCGCCTGTGGCGAAA...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCTCAGCAGCCGCCGCTaGTCGGACCGGCGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPLSSRR*SDRRSD
Trigger: GTCCGAGCGCCGGTCCGAGCAGCGGCGGCTGCTGAG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGGGGTTCCTCCCGTGTaGCCCGGCGTGGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGGVPPV*PGVVGR
Trigger: CCTACCCACCACGCCGGGCCACACGGGAGGAACCCC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
71% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGCTCCCTCGCTGGGCTTaGGGCCCCCAACCCCACGCT +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGLPRWA*GPQPHA
Trigger: AGCGTGGGGTTGGGGGCCCCAAGCCCAGCGAGGGAG...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGCCCGCCATCCTGGCCTaGCTGAGCCGGGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGPAILA*LSRGVT
Trigger: TGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGG...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGGCCTTCGCTGCGGGCTaGGCCTGTCTGGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRAFAAG*ACLVLP
Trigger: CGGGAGCACCAGACAGGCTCAGCCCGCAGCGAAGGC...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGACGGCCCACGGTGCCTaGTGTCGGGAGGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPTAHGA*CREGLA
Trigger: GGCAAGACCCTCCCGACAGCAGGCACCGTGGGCCGT...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGGGGCCTGCAGGCCTTaGTGGAGACGCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGGACRP*WRRLLF
Trigger: GAACAGGAGGCGTCTCCAGCAAGGCCTGCAGGCCCC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGAGTGCCCACCGCAGTaGTGCCTGCTGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGECPPQ*CLLGRQ
Trigger: CTGCCTACCCAGCAGGCACCACTGCGGTGGGCACTC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCGGAGGATGAGGCAGTaGCTGCAGTGGTGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKRRMRQ*LQWWRR
Trigger: TCGCCGCCACCACTGCAGCCACTGCCTCATCCTCCG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGGGTGGTGGAGGAGGTaGGGGGTACTCAGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGGWWRR*GVLRGR
Trigger: CCGCCCCCTGAGTACCCCCCACCTCCTCCACCACCC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGTGCCTCCTGCGGGGGTaGAAACGGGAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKCLLRG*KREEGL
Trigger: GAGGCCTTCCTCCCGTTTCCACCCCCGCAGGAGGCA...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCGGCTGCCATTGGCATaGGCAGGTGGTAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKRLPLA*AGGRPP
Trigger: GGGAGGCCTACCACCTGCCCATGCCAATGGCAGCCG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGGTGACTCCTCCGTaGGGCCTGCAGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGVTPP*GLQALL
Trigger: CAGCAAGGCCTGCAGGCCCCACGGAGGAGTCACCCC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGCCCAGCAGGTGGTTCTaGGGGACGCAGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGPSRWF*GTQRRT
Trigger: AGTGCGCCTCTGCGTCCCCCAGAACCACCTGCTGGG...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGTCCCGGGGCCCATCCTaGGGCCGCCGCTTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPSRGPS*GRRLRF
Trigger: AAAACGCAAGCGGCGGCCCCAGGATGGGCCCCGGGA...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGTGGCGGAGGTACCGATaGCGCTCAGCAGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPWRRYR*RSAAAA
Trigger: AGCGGCGGCTGCTGAGCGCCATCGGTACCTCCGCCA...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGTGGTAGGCCTCCCGTaGGTATGCCCCTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPVVGLP*VCPSAL
Trigger: GAGGGCAGAGGGGCATACTCACGGGAGGCCTACCAC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGCCCCTCTCAGCCCTaGCCCAAAGGCGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGPSQP*PKGESL
Trigger: GAGGCTTTCGCCTTTGGGTCAGGGCTGAGAGGGGCC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCCGCTTTACCTTGAATaGAGGCAGCCGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKPLYLE*RQPQGP
Trigger: GGGGCCCTGCGGCTGCCTTCATTCAAGGTAAAGCGG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGAAGCTCGGGGCCTTCTaGCCATCTCCCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGKLGAF*PSPPPS
Trigger: GGAAGGTGGGGGAGATGGGCAGAAGGCCCCGAGCTT...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGTGTGCAGGGCCCATaGCCTGACCCAGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGVQGP*PDPEGT
Trigger: GGTGCCTTCTGGGTCAGGGCATGGGCCCTGCACACC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGCCCTCTGCCAGCTCTaGTTCTTCCCTGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGALCQL*FFPGWQ
Trigger: CTGCCACCCAGGGAAGAAGCAGAGCTGGCAGAGGGC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTCAGCCCCGCTTGTCTaGTGCAGCAGCCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGSAPLV*CSSRSY
Trigger: GTACGAGCGGCTGCTGCAGCAGACAAGCGGGGCTGA...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGTCTCCTGGACCAGCATaGCGAGCACACGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPSPGPA*RAHGPR
Trigger: CCGTGGGCCGTGTGCTCGCCATGCTGGTCCAGGAGA...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCACCTCCACAGGTGCTaGCGTGGGCACTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKHLHRC*RGHWDF
Trigger: GAAGTCCCAGTGCCCACGCCAGCACCTGTGGAGGTG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACTGGGCCGGGAAACTTaGCCTGCGGCGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGLGRET*PAAVWL
Trigger: CAGCCACACCGCCGCAGGCCAAGTTTCCCGGCCCAG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGGAGATGGGGGCATGTaGGCCCTGCTGAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGGDGGM*ALLSPL
Trigger: TAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACAGTTCGGGCAGGGGTGTaGCTGGGGAGCCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTVRAGV*LGSLQP
Trigger: GGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAAC...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGCCTCGGGCCAACTCTTaGCCAGAGATGCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGPRANS*PEMRGP
Trigger: TGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGG...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCCAGTGAGTGTCGTTaGGCCAGTCAGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPSECR*ASQPRL
Trigger: CAAGCGGGGCTGACTGGCTCAACGACACTCACTGGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCCAGGCCCAGGTGCTTaGGCGTACGGGGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRPGPGA*AYGGEG
Trigger: TCCTTCACCCCCGTACGCGCAAGCACCTGGGCCTGG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCGGCAAGCCGTAGGCTaGCTCCTGCGGGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRRQAVG*LLRGWK
Trigger: TTTCCACCCCCGCAGGAGGCAGCCTACGGCTTGCCG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGCTTGCCCTGGGTCTTaGCTCGCTCTTCGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPACPGS*LALRPA
Trigger: AGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACACTCCTCCGTGGGGCCTaGAGGCCTTGCTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTLLRGA*RPCWRR
Trigger: GCGTCTCCAGCAAGGCCTGCAGGCCCCACGGAGGAG...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACAGGTCCAGGGGCAGGTTaGGGATGGTCCGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTGPGAG*GWSAPR
Trigger: GCGTGGAGCGGACCATCCGCAACCTGCCCCTGGACC...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACCCTCCTCCCGCTGCTaGTGCAGTTGCTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGPSSRC*CSCCGL
Trigger: CAAGCCGCAGCAACTGCAGCAGCAGCGGGAGGAGGG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGAGCCTTGCGGGAGGCTaGGCCGGGAAACTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRSLAGG*AGKLGL
Trigger: CAGGCCAAGTTTCCCGGCCCAGCCTCCCGCAAGGCT...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGAGGGTCTTGCCCTCTaGCAGCTCTGCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGEGLAL*QLCFFP
Trigger: AGGGAAGAAGCAGAGCTGGCAGAGGGCAAGACCCTC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCTCCCCATCGCTGCTaGTGCTGCTGTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPPHRC*CCCQRT
Trigger: AGTCCTCTGACAGCAGCAGCAGCAGCGATGGGGAGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGTAGCTGCTGCCAATaGCCTCCTGCACGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGSCCQ*PPARSA
Trigger: AGCGCTACGTGCAGGAGGGCATTGGCAGCAGCTACC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCCGGAACAGGTAGCTaGTGCCAATGCCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPGTGS*CQCPPA
Trigger: TGCAGGAGGGCATTGGCAGCAGCTACCTGTTCCGGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGGTGGTCTCCGGGGCTaGGGAGCCAGAGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCGGLRG*GARAGR
Trigger: CCTGCCCGCTCTGGCTCCCCAGCCCCGGAGACCACC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCCATCAGGTCTGGGTaGGAGGAGGTAGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPIRSG*EEVGRL
Trigger: CAACCTGCCTACCTCCTCCCACCCAGACCTGATGGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGTTGCGGTGCTTGCCCTaGGTCTTGCCTCGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPLRCLP*VLPRSS
Trigger: CGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAA...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGAGGAGGATGAGGAGCTaGAAGAGCTGCTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGRRMRS*KSCCSR
Trigger: CCGAGAGCAGCAGCTCTTCCAGCTCCTCATCCTCCT...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGAGGCAGGATCCACGATaGGCTTGTAGTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKRQDPR*ACSSAT
Trigger: AGTGGCGGAACTACAAGCTCATCGTGGATCCTGCCT...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCGCCCCGAGTGCTGGTaGAGAGCACACGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCRPECW*RAHGPG
Trigger: GCCTGGCCCGTGTGCTCTTCACCAGCACTCGGGGCG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGTTGGTAGCTGTTCTCTaGCCGCCGGGGCTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPLVAVL*PPGLEG
Trigger: TCCTTCAAGCCCCGGCGGTCAGAGAACAGCTACCAA...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGTCTCTGTGGCCTCTaGGTCTTCAACAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGCLCGL*VFNSRQ
Trigger: CTGCCTGCTGTTGAAGACTCAGAGGCCACAGAGACA...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGACTTGGTGGCATCGATaGTGGTGTCGTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPTWWHR*WCRGPP
Trigger: GGGTGGACCACGACACCATCATCGATGCCACCAAGT...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGGTAGTAGCCTTCGCTaGGGGCTGAGCCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGGSSLR*GLSLSG
Trigger: ACCAGACAGGCTCAGCCCGCAGCGAAGGCTACTACC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGAACAGGTAGCTGCTaGCAATGCCCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGTGSC*QCPPAR
Trigger: ACGTGCAGGAGGGCATTGGCAGCAGCTACCTGTTCC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGGCTGCACCCGAGCCTTaGAACTTCTCACTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRAAPEP*NFSLRA
Trigger: GGCCCTGAGTGAGAAGTTCCAAGGCTCGGGTGCAGC...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCGTGGAGGCGGTTGTaGAGGCTGAAGATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPWRRL*RLKMQR
Trigger: TCTCTGCATCTTCAGCCTCCACAACCGCCTCCACGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGCCGCGTTCTGGAATaGCTTGGCCTTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGRVLE*LGLLLL
Trigger: AAGGAGGAGAAGGCCAAGCCATTCCAGAACGCGGCC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCAGGACCTCATCAGCTaGGGAACTGAAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRQDLIS*GTEEGG
Trigger: GCCGCCCTCTTCAGTTCCCCAGCTGATGAGGTCCTG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGGAGTGACACCAGGGTaGAAGGGTGACCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGGVTPG*KGDPQG
Trigger: ACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGGACTGAGGTGTaGACTGGCCAAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGRTEV*TGQRKM
Trigger: CATCTTCCTTTGGCCAGTTCACACCTCAGTCCTCCC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGTGGTCAGGTTGGTaGTTGTGTGATGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPGWSGW*LCDGPS
Trigger: ACTGGGTCCATCACACAATCACCAACCTGACCACCC...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGCCCGCTCCCTGTAGGTaGCACATCCTCAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGPAPCR*HILKIS
Trigger: GCTAATTTTGAGGATGTGGCACCTACAGGGAGCGGG...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCGGTTGAGGTCTCGCTaGATGATGCTCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKRLRSR*MMLFIS
Trigger: GGAGATGAAGAGCATCATGCAGCGAGACCTCAACCG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATGTGACTGGGGAGCCTaGAACCCTTTCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTCDWGA*NPFRHW
Trigger: CCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGGCGGCGATGGCCGTaGAGGCGGTTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCWRRWP*RRLWRL
Trigger: CAGCCTCCACAACCGCCTCCACGGCCATCGCCGCCA...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACACTCCCTGTATCTCTaGCCCCAAGGACCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGHSLYL*PQGPCC
Trigger: GCAGCATGGTCCTTGGGGCCAGAGATACAGGGAGTG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGTCTCCAGAAGAGCATaGAGAAGCCTGGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGVSRRA*RSLVLS
Trigger: GGACAGAACCAGGCTTCTCCATGCTCTTCTGGAGAC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCTTCCTCAGCAGGAGTaGAGGGACGAGGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPLPQQE*RDEASF
Trigger: AAAAGAGGCCTCGTCCCTCCACTCCTGCTGAGGAAG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCCGCCGCTTGCGTTTTaGGGTGGTCAGGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRPPLAF*GGQVGD
Trigger: ATCACCAACCTGACCACCCCAAAACGCAAGCGGCGG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGTTAGGCGTGCAGCAGTaGTTGATGAATCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKLGVQQ*LMNLAR
Trigger: CCTGGCCAGATTCATCAACCACTGCTGCACGCCTAA...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACACAGAGACCCCTAAACTaGGGAGGGGTACACGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTQRPLN*GGVHAG
Trigger: CCCTGCGTGTACCCCTCCCCAGTTTAGGGGTCTCTG...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATTGCGCGTACGGGGGTaGAGGAGGATCTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTLRVRG*RRISTS
Trigger: AGAGGTAGAGATCCTCCTTCACCCCCGTACGCGCAA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGTTCCTTGGGAGGACTaGGGTGTGAACTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGVPWED*GVNWPK
Trigger: CTTTGGCCAGTTCACACCTCAGTCCTCCCAAGGAAC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCCTTCTCCTTCTTGCTaGTGGGGTAGTAGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRPSPSC*WGSSLR
Trigger: GCGAAGGCTACTACCCCATCAGCAAGAAGGAGAAGG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTAGCAGGGGGTGCCGTTaGCAGGAGTGCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAASRGCR*QECPPQ
Trigger: CTGCGGTGGGCACTCCTGGCAACGGCACCCCCTGCT...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGCACACGGCCCACGGTaGCTGCTGTCGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAAHGPR*LLSGGS
Trigger: AGACCCTCCCGACAGCAGGCACCGTGGGCCGTGTGC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGATCCTCCTTGGCTTGCTaGTTGGCCGCGTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGSSLAC*LAAFWN
Trigger: ATTCCAGAACGCGGCCAAGCAGCAAGCCAAGGAGGA...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCGCTGCTGCTGCAGTTaGTGCGGCTTGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCRCCCS*CGLGSS
Trigger: GGAGGAGCCCAAGCCGCAGCAACTGCAGCAGCAGCG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCCTTTGATGTCAAGCTaGGCATGGATGATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKPLMSS*AWMMLP
Trigger: GGGCAACATCATCCATGCCCAGCTTGACATCAAAGG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGGGCCTTGCCCCCAGTaGGCACAGTCTGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCGPCPQ*AQSEGC
Trigger: ACACCCCTCAGACTGTGCCCACTGGGGGCAAGGCCC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCAGTGGTGGCGGCGATaGCCGTGGAGGCGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAQWWRR*PWRRLW
Trigger: CCACAACCGCCTCCACGGCCATCGCCGCCACCACTG...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCCGTGTGGCCCGGCGTaGTGGGTAGGAAGTATGGCG +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCPCGPA*WVGSMA
Trigger: CGCCATACTTCCTACCCACCACGCCGGGCCACACGG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGATCCTCAAAATTAGCTaGGGCCGGAGGGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRILKIS*GRRGCA
Trigger: TGCACACCCCCTCCGGCCCCAGCTAATTTTGAGGAT...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGAGCCGAGTTAACATCTaGGTCTGCATCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKSRVNI*VCIWKD
Trigger: GTCCTTCCAGATGCAGACCCAGATGTTAACTCGGCT...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACTTTATCCTCCTCCTTaGCTTGCTGCTTGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGLYPPP*LAAWPR
Trigger: ACGCGGCCAAGCAGCAAGCCAAGGAGGAGGATAAAG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGACGCAGAGGCGCACTaGGGGGTGACTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAADAEAH*GVTPPW
Trigger: CCACGGAGGAGTCACCCCCCAGTGCGCCTCTGCGTC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACCTCGTCCACGCCAATaGGCTGCTTGGAGTAGATCA +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGPRPRQ*AAWSRS
Trigger: TGATCTACTCCAAGCAGCCCATTGGCGTGGACGAGG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGTTCGTTGTTGTCCTTTaGTGTCAAGCTGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKFVVVL*CQAGHG
Trigger: TCCATGCCCAGCTTGACATCAAAGGACAACAACGAA...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCAGGGGGCGTGGGCTTaGCGGCCAGGGCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAQGAWA*RPGHSC
Trigger: ACAACTATGCCCTGGCCGTCAAGCCCACGCCCCCTG...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTTGCTGCTGCAGTTGCTaGGGCTTGGGCTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAACCCSC*GLGSSA
Trigger: GGCGGAGGAGCCCAAGCCGCAGCAACTGCAGCAGCA...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTTCCTCCCGCTGCTGCTaGAGTTGCTGCGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAASSRCC*SCCGLG
Trigger: GCCCAAGCCGCAGCAACTGCAGCAGCAGCGGGAGGA...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGTCCACGCCCTCCAGCTaGCGGGCCGAGACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVSTPSS*RAETGH
Trigger: GTGCCCAGTCTCGGCCCGGCAGCTGGAGGGCGTGGA...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGATTTTTGGACCTGACATaGCAACGGGGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGFLDLT*QRGSWR
Trigger: CCTCCAAGACCCCCGTTGCCATGTCAGGTCCAAAAA...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGATATCTTGTCGGCTGCTaGAGAAGCTTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGYLVGC*RSLCPG
Trigger: CCCAGGACACAAGCTTCTCCAGCAGCCGACAAGATA...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGATTGAAGTGGTGCTGCTaGAGTAGGCAGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGLKWCC*SRQSPE
Trigger: CTCAGGACTCTGCCTACTCCAGCAGCACCACTTCAA...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGAAGATGCAGAGAAGTaGCGGCGGGAAAAGGCATCT +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGEDAEK*RREKAS
Trigger: AGATGCCTTTTCCCGCCGCCACTTCTCTGCATCTTC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAATGCTCTTCATCTCCTaGACCAGCATGGCGAGCACA +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGMLFIS*TSMAST
Trigger: TGTGCTCGCCATGCTGGTCCAGGAGATGAAGAGCAT...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGGTCCCCGGACGTCCTaGCTCTCCAGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAGPRTS*LSSLLL
Trigger: GAGAAGGAGGCTGGAGAGCCAGGACGTCCGGGGACC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCTGTCTCCTTCTTTGTaGTATCCACAGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKLSPSL*YPQLPL
Trigger: GAGAGGAAGCTGTGGATACCACAAAGAAGGAGACAG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGATCACGATCTTCTTCTaGGACTCGATGGTGATGACC +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKITIFF*DSMVMT
Trigger: GGTCATCACCATCGAGTCCCAGAAGAAGATCGTGAT...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGGAGGACGAGGACAATaGGGAGGAAGAGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCGGRGQ*GGRGGG
Trigger: TCCTCCGCCTCTTCCTCCTCATTGTCCTCGTCCTCC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGGTCATTTTCGCCATCTaGGTCAGCATACAGAGAACA +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKVIFAI*VSIQRT
Trigger: TGTTCTCTGTATGCTGACTCAGATGGCGAAAATGAC...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGCATCAGCTGGGGAACTaGAGAGGGCGGCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVHQLGN*RGRRVR
Trigger: CCGCACCCGCCGCCCTCTTCAGTTCCCCAGCTGATG...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACAAGGTTGAAGTGGTGCTaGTGGAGTAGGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTRLKWC*WSRQSP
Trigger: AGGACTCTGCCTACTCCAGCAGCACCACTTCAACCT...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGTTAACATCTGGGTCTaGATCTGGAAGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGVNIWV*IWKDMG
Trigger: GCCCATGTCCTTCCAGATGCAGACCCAGATGTTAAC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCCCCATCGCTGCTGCTaGTGCTGTCAGAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCPHRCC*CCQRTP
Trigger: AGGAGTCCTCTGACAGCAGCAGCAGCAGCGATGGGG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCTGAGCCTGTCTGGTaGTCCCGGGGCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVAEPVW*SRGPSW
Trigger: CCAGGATGGGCCCCGGGAGCACCAGACAGGCTCAGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTCCACAGGAAACAGCTaGTGGCTGCTACAAAACATT +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGSTGNS*WLLQNI
Trigger: AATGTTTTGTAGCAGCCAGCAGCTGTTTCCTGTGGA...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCCTCCACCAGGTTCTaGAGGCTCCGGGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVASTRF*RLRGWS
Trigger: GCTCCACCCCCGGAGCCTCCAGAACCTGGTGGAGGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGACCAAGAAGGAAAACTTaGAGCGCTGCTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGPRRKT*SAAPSA
Trigger: TGCTGAAGGAGCAGCGCTCCAAGTTTTCCTTCTTGG...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGAGCATGGAGAAGCCTaGTTCTGTCCATTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGEHGEA*FCPFAL
Trigger: CAAGGCAAATGGACAGAACCAGGCTTCTCCATGCTC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCACTGGGACTTCTCTaGGGGGCGGGGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVALGLL*GAGRLR
Trigger: CCTCAGCCTCCCCGCCCCCCAGAGAAGTCCCAGTGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCTGCCGGGCCGAGACTaGGCACACGTCCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAALPGRD*AHVQVL
Trigger: AAGTACCTGGACGTGTGCCCAGTCTCGGCCCGGCAG...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATCAGAACTACGAAACTaGGAGGACGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTSELRN*EDEEEE
Trigger: CTCTTCCTCCTCGTCCTCTCAGTTTCGTAGTTCTGA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTTCCTCCTCCTTGGCTTaGTGCTTGGCCGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAASSSLA*CLAAFW
Trigger: CCAGAACGCGGCCAAGCAGCAAGCCAAGGAGGAGGA...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCATCGCTGCTGCTGCTaGTGTCAGAGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCHRCCC*CQRTPP
Trigger: AGGAGGAGTCCTCTGACAGCAGCAGCAGCAGCGATG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGCTTAAACTTAGGGACTaGGAGGGAAAAGTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKLKLRD*EGKVSV
Trigger: AACAGAGACTTTTCCCTCCCAGTCCCTAAGTTTAAG...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGAGAAGCTTGTGTCCTaGGAGCAGGGGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAEKLVS*EQGVPL
Trigger: CAACGGCACCCCCTGCTCCCAGGACACAAGCTTCTC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACAGGAGGTGTAAGAAGGTaGGAAGCGCTCAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTGGVRR*EALSCI
Trigger: AATACAGCTGAGCGCTTCCCACCTTCTTACACCTCC...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGGGGTGTAGGAGCCATTaGCAATTAGTTCATAGTATT +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGGCRSH*QLVHSI
Trigger: AATACTATGAACTAATTGTCAATGGCTCCTACACCC...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCCCCGCTTGTCTGCTaGAGCAGCCGCTCGTACGTA +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVAPLVC*SSRSYV
Trigger: TACGTACGAGCGGCTGCTGCAGCAGACAAGCGGGGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACCTCGGCCGGCGCCCTaGGAGGCTCGGAAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKPRPAP*EARKLR
Trigger: CCGCAACTTCCGAGCCTCCCAGGGCGCCGGCCGAGG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGGCTTTCATAATACGCTaGGTAGTTTGCATCAGAACT +
Preference number: 4 (lower is better)
Translates to: THPAILAWLSRGVTPGWKAFIIR*VVCIRT
Trigger: AGTTCTGATGCAAACTACCCAGCGTATTATGAAAGC...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGGTAGTCCTGGTCGGTaGGCCGGCTGGGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKGSPGR*AGWARG
Trigger: CCCCCGAGCCCAGCCGGCCCACCGACCAGGACTACC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGAGGGCACACTCTCATTaGTGGTCTCCGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVRAHSH*WSPGLG
Trigger: CCCCAGCCCCGGAGACCACCAATGAGAGTGTGCCCT...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCTCGGAAATTTCCGATaGCTCTTTCCGCTTTACCTT +
Preference number: 4 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRLGNFR*LFPLYL
Trigger: AAGGTAAAGCGGAAAGAGCCATCGGAAATTTCCGAG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGCATACAGAGAACATTTaGAAGACGAATCGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGHTENI*KTNRFP
Trigger: AGGAAAGCGATTCGTCTTCCAAATGTTCTCTGTATG...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGGGGCAGGTTGCGGATaGTCCGCTCCACGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKGAGCG*SAPRPG
Trigger: CCCGGGGCGTGGAGCGGACCATCCGCAACCTGCCCC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCTCTGTTTTTGGACCTaGCATGGCAACGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCLCFWT*HGNGGL
Trigger: AAGACCCCCGTTGCCATGTCAGGTCCAAAAACAGAG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCTTTCCGCTTTACCTTaGATGAAGGCAGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAALSALP*MKAAAG
Trigger: CCCTGCGGCTGCCTTCATTCAAGGTAAAGCGGAAAG...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCAGGTCACTGTCCATaGTGGCGGAGGTACCGATGG +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVAGHCP*WRRYRW
Trigger: CCATCGGTACCTCCGCCATCATGGACAGTGACCTGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTTGGCCTTCTCCTCCTTaGTCTCCCACCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAWPSPP*SPTTGQ
Trigger: TTGACCAGTGGTGGGAGAGCAAGGAGGAGAAGGCCA...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTAGCTGGAAGAGCTGCTaGTCTCGGAGTCTGATGTGC +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAASWKSC*SRSLMC
Trigger: GCACATCAGACTCCGAGAGCAGCAGCTCTTCCAGCT...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGAAACAGCTGCTGGCTaGTACAAAACATTTACAGCT +
Preference number: 4 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGETAAG*YKTFTA
Trigger: AGCTGTAAATGTTTTGTAGCAGCCAGCAGCTGTTTC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGAGGGAGCTTGGAGATTaGCCGCATCCCCCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVRELGD*PHPPES
Trigger: ACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCT...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGAGTCACTTCCTTCAGTaGAATCTGTCCAATATAGAA +
Preference number: 4 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGSHFLQ*NLSNIE
Trigger: TTCTATATTGGACAGATTCCACTGAAGGAAGTGACT...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGCGCAGTGGTGCCTGCTaGGTAGGCAGCTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVRSGAC*VGSCVR
Trigger: TCTGACACAGCTGCCTACCCAGCAGGCACCACTGCG...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGGGTATCTTGTCGGCTaGTGGAGAAGCTTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAGYLVG*WRSLCP
Trigger: AGGACACAAGCTTCTCCAGCAGCCGACAAGATACCC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGCCAGAGCAAAGGACTTaGGGTGCTTGCCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVPEQRT*GACPGS
Trigger: AGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGG...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGTGCTTGGCCGCGTTCTaGAATGGCTTGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVCLAAF*NGLAFS
Trigger: GGAGAAGGCCAAGCCATTCCAGAACGCGGCCAAGCA...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGCCTCTTTTCCTCACTaGCCTCGGAAATTTCCGATG +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCASFPH*PRKFPM
Trigger: CATCGGAAATTTCCGAGGCCAGTGAGGAAAAGAGGC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCCTCCTCTTCCTCGGTaGGGCGGCCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPPPLPR*GGLGLQ
Trigger: CTGGAGGCCGAGGCCGCCTCACCGAGGAAGAGGAGG...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAATGCCCACCGCAGTGGTaGCTGCTGGGTAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKCPPQW*LLGRQL
Trigger: CAGCTGCCTACCCAGCAGGCACCACTGCGGTGGGCA...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAATGCCGTTGCCAGGAGTaGCCACCGCAGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKCRCQE*PPQWCL
Trigger: CAGGCACCACTGCGGTGGGCACTCCTGGCAACGGCA...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCTCGGAGTCTGATGTaGTGTCATTTTCGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCSRSLM*CHFRHL
Trigger: CAGATGGCGAAAATGACAGCACATCAGACTCCGAGA...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGCGGCCCATCAGGTCTaGGTGGGAGGAGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKAAHQV*VGGGRQ
Trigger: CTGCCTACCTCCTCCCACCCAGACCTGATGGGCCGC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCCCGCTTCGGGGGCTTaGTCCCCGGACGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPPASGA*SPDVLA
Trigger: AGCCAGGACGTCCGGGGACCAAGCCCCCGAAGCGGG...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCGGGGGCCCAGCAGGTaGTTCTGGGGGACGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPRGPSR*FWGTQR
Trigger: CCTCTGCGTCCCCCAGAACCACCTGCTGGGCCCCCG...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACCCCACGCTTGGAGATaGGGGCATGTGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKPHAWR*GHVGPA
Trigger: AGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACCCAGGGGGAGAACATaGCCACTGCCCCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKPRGRT*PLPQRP
Trigger: GGGTCTCTGGGGCAGTGGCCATGTTCTCCCCCTGGG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACTGACCGCCGGGGCTTaGAGGAGGTTGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKLTAGA*RRLKWC
Trigger: GCACCACTTCAACCTCCTTCAAGCCCCGGCGGTCAG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACCTGAGAGTAGGGGGTaGTGCCCCGAGACGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKPESRG*CPETCR
Trigger: CCTACACGTCTCGGGGCAGCACCCCCTACTCTCAGG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGGGCCGGAGGGGGTGTaGAGGGCCCATGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQGPEGV*RAHALT
Trigger: GGTCAGGGCATGGGCCCTGCACACCCCCTCCGGCCC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCGCGGCCCAGGGAGCTTaGAGATTGGCCGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPAAQGA*RLAASP
Trigger: GGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGC...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAATGTGGCCCGGCGTGGTaGGTAGGAAGTATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKCGPAW*VGSMAL
Trigger: CAGCGCCATACTTCCTACCCACCACGCCGGGCCACA...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGCGTTCTGGAATGGCTTaGCCTTCTCCTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVRSGMA*PSPPCS
Trigger: AGAGCAAGGAGGAGAAGGCCAAGCCATTCCAGAACG...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCCTTGTTGTCTTCCAGTaGGAACTTGTAGTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCLVVFQ*ELVVVG
Trigger: ACCTACGACTACAAGTTCCCACTGGAAGACAACAAG...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCGGGGGTGGAGCCTCTaGGGCAGGAGGCCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQRGWSL*GRRPVV
Trigger: GACTACCGGCCTCCTGCCTCAGAGGCTCCACCCCCG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTTTCCTGATCCATCTTTaGTCATTTACACTGCGCGAG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAFLIHL*SFTLRE
Trigger: CTCGCGCAGTGTAAATGAGCAAAGATGGATCAGGAA...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGGCCGTCTCAGTGGCTaGACCCGAGCCTTGGAACTT +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKGRLSG*TRALEL
Trigger: AAGTTCCAAGGCTCGGGTGCAGCCACTGAGACGGCC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAAGGAGAGGCAGAAGCTaGCTCCAGGGACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKRRGRS*LQGLRL
Trigger: GAGCCTCAGTCCCTGGAGGCAGCTTCTGCCTCTCCT...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCTCCCGGGTAGCCCCTaGCTCCCCGCTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQLPGSP*LPAPCR
Trigger: CCTACAGGGAGCGGGGAGCCAGGGGCTACCCGGGAG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCGGGCTCGGCTGCCATTaGCATGGGCAGGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPGLGCH*HGQVVG
Trigger: GCCTACCACCTGCCCATGCCAATGGCAGCCGAGCCC...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCTGAGGCTCCCTCGCTaGGCTTGGGGCCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQLRLPR*AWGPQP
Trigger: GGGTTGGGGGCCCCAAGCCCAGCGAGGGAGCCTCAG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCGGAAGAGGCGGAGGATaGGGCAGTGGCTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPGRGGG*GSGCSG
Trigger: ACCACTGCAGCCACTGCCTCATCCTCCGCCTCTTCC...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGTTGTCATTCAGCCTTaGAAAAGTCACTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAVVIQP*KSHFLQ
Trigger: CTGAAGGAAGTGACTTTTGCAAGGCTGAATGACAAC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTATACGCTGGGTAGTTTaGATCAGAACTACGAAACTG +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAAIRWVV*IRTTKL
Trigger: CAGTTTCGTAGTTCTGATGCAAACTACCCAGCGTAT...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCTGCGGGAATCCAGGCTaGTGTGCTGGGCGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPCGNPG*CAGRRA
Trigger: TGCCCTTCGCCCAGCACAGCAGCCTGGATTCCCGCA...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCGGGAAACTTGGCCTaGGGCGGTGTGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQPGNLA*GGVAGG
Trigger: CCCTCCAGCCACACCGCCGCAGGCCAAGTTTCCCGG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCGGGCAGGGGTGTGACTaGGGAGCCTGCAACCCTTTC +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPGQGCD*GACNPF
Trigger: GAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCC...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGAGGGGGCTCCGGGGCTaGCACCACCTCGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQRGLRG*HHLDGR
Trigger: TCTGCCATCGAGGTGGTGCCAGCCCCGGAGCCCCCT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTACAGGAAACAGCTGCTaGCTGCTACAAAACATTTAC +
Preference number: 4 (lower is better)
Translates to: QDRICTGRHPRFPQETAATGNSC*LLQNIY
Trigger: GTAAATGTTTTGTAGCAGCCAGCAGCTGTTTCCTGT...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGCTGCTCTCGGAGTCTaGTGTGCTGTCATTTTCGCC +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKAALGV*CAVIFA
Trigger: GGCGAAAATGACAGCACATCAGACTCCGAGAGCAGC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAATGGCCCCAAGGACCATaGTGCTGTTCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKWPQGP*CCSLPP
Trigger: AGGAGGAAGAGAACAGCAGCATGGTCCTTGGGGCCA...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACTGGTTCTGTCCATTTaGCTTGGGAGACTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKLVLSI*LGRLPG
Trigger: ACCCGGGAGTCTCCCAAGGCAAATGGACAGAACCAG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGCCTGCAGGCCTTGCTaGAGACGCCTCCTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQACRPC*RRLLFG
Trigger: CCCGAACAGGAGGCGTCTCCAGCAAGGCCTGCAGGC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCTTGCCCTGCCGCAGCTaGTGGAGCCGAGTTAACATC +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPLPCRS*WSRVNI
Trigger: GATGTTAACTCGGCTCCATCAGCTGCGGCAGGGCAA...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCACCGCAGTGGTGCCTaGTGGGTAGGCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQHRSGA*WVGSCV
Trigger: GACACAGCTGCCTACCCAGCAGGCACCACTGCGGTG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACTGGCCAAAGGAAGATaGGGTATCTTGTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKLAKGR*GILSAA
Trigger: AGCAGCCGACAAGATACCCCATCTTCCTTTGGCCAG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGCACACTCTCATTGGTaGTCTCCGGGGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQAHSHW*SPGLGS
Trigger: GCTCCCCAGCCCCGGAGACCACCAATGAGAGTGTGC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGTGCTCCAGGAGGATGTaGCTGAGCAGGGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQCSRRM*LSRGLG
Trigger: CCCTAGGCCCCTGCTCAGCCACATCCTCCTGGAGCA...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAACAGACCCCACTCGTaGATCCGGCTCCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPNRPHS*IRLRPN
Trigger: ATTTGGCCGGAGCCGGATCCACGAGTGGGGTCTGTT...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCCCCAAGGACCATGCTaGTGTTCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPPQGPC*CSLPPP
Trigger: AGGAGGAGGAAGAGAACAGCAGCATGGTCCTTGGGG...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGAGGACTTGCGGTGCTTaGCCTGGGTCTTGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQRTCGA*PGSCLA
Trigger: AGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCACTCTTGACCAGAGATaGGTGGTCCAGGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPTLDQR*VVQGQV
Trigger: AACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGT...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCGGCAGCTCTCTGTaGCACACAGACACGGGATCT +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQPGSSL*HTDTGS
Trigger: AGATCCCGTGTCTGTGTGGCACAGAGAGCTGCCGGG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGATTCGGCCGTCTCAGTaGCTGCACCCGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQIRPSQ*LHPSLG
Trigger: TCCAAGGCTCGGGTGCAGCCACTGAGACGGCCGAAT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGTTGACCAGAGATGCGTaGTCCAGGGGCAGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQLTRDA*SRGRLR
Trigger: CCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAA...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCACTTGTAGTCGTAGGTaGTCTCCTCGTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPTCSRR*SPRPRQ
Trigger: TTGGCGTGGACGAGGAGATCACCTACGACTACAAGT...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGAGCGGGCACAGGGTCTaGATTCGCACTTTCGCCACA +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQSGHRV*IRTFAT
Trigger: TGTGGCGAAAGTGCGAATGCAGACCCTGTGCCCGCT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCGGCAATCAATCCCTTaGCCTGCCGCAGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQRQSIP*PAAADG
Trigger: TCCATCAGCTGCGGCAGGGCAAGGGATTGATTGCCG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCTGGCAACGGGGGTCTTaGAGGTCTTCGACTGGTATA +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPWQRGS*RSSTGI
Trigger: TATACCAGTCGAAGACCTCCAAGACCCCCGTTGCCA...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCTTGGCTTGCTGCTTaGCCGCGTTCTGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQPWLAA*PRSGMA
Trigger: AGCCATTCCAGAACGCGGCCAAGCAGCAAGCCAAGG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGACAATTATAAAAATGTaGCGTCGGGTTTGCGCTATT +
Preference number: 4 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVTIIKM*RRVCAI
Trigger: AATAGCGCAAACCCGACGCCACATTTTTATAATTGT...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGGGCTTGAAGGAGGTTaGAGTGGTGCTGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQGLEGG*SGAAGV
Trigger: TACTCCAGCAGCACCACTTCAACCTCCTTCAAGCCC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR TCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCAAGTCGGTCCATaGGCTCCAAGGAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQPQVGP*APRSSQ
Trigger: TTGTGAACTCCTTGGAGCTCATGGACCGACTTGGGG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCATGTCAAGCTGGGCATaGATGATGTTGCCCATGACG +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPMSSWA*MMLPMT
Trigger: CGTCATGGGCAACATCATCCATGCCCAGCTTGACAT...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCCGCCAATGGGCTGCTTaGAGTAGATCACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: IIKMWRRVCAINICTVQPRQWAA*SRSRSS
Trigger: AGAAGATCGTGATCTACTCCAAGCAGCCCATTGGCG...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR GCA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAATGTGGCGTCGGGTTTaGGCTATTAACATATGTACA +
Preference number: 4 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKMWRRV*AINICT
Trigger: TGTACATATGTTAATAGCGCAAACCCGACGCCACAT...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCTGGCACCACCTCGATaGCAGAGAAGGAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQLAPPR*QRRRQF
Trigger: AAACTGTCTCCTTCTCTGCCATCGAGGTGGTGCCAG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCGTCCGATGTCTCTGTaGCCTCTGAGTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQRPMSL*PLSLQQ
Trigger: CTGTTGAAGACTCAGAGGCCACAGAGACATCGGACG...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CCA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGATGACGGAGGTAAGGTaGAGGTTTTTGACCGTTTCC +
Preference number: 4 (lower is better)
Translates to: TIIKMWRRVCAINICTVQMTEVR*RFLTVS
Trigger: GGAAACGGTCAAAAACCTCCACCTTACCTCCGTCAT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS GCA 90 bp GCCCAGCGGGCACAGGGTCTGCATTCGCACTTTCGCCACAGGCGCTaGCGGGGGACCCACGGGGCCGAGGGTAGCGGCTTCGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: AQRAQGLHSHFRHRR*RGTHGAEGSGFASA
Trigger: GGCCGAGGCGAAGCCGCTACCCTCGGCCCCGTGGGTCCCCCGGCAGCGCCTGTGGCGAAAGTGCGAATGCAGACCCTGTGCCCGCTGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS CCA 90 bp CGCCTCAGCCACCACCACCTCGGGGGCCTCCAGGACCTCATCAGCTaGGGAACTGAAGAGGGCGGCGGGTGCGGGCACTGGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: RLSHHHLGGLQDLIS*GTEEGGGCGHWLRG
Trigger: CCCCCGGAGCCAGTGCCCGCACCCGCCGCCCTCTTCAGTTCCCCAGCTGATGAGGTCCTGGAGGCCCCCGAGGTGGTGGTGGCTGAGGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTCCCGCTTCGGGGGCTaGGTCCCCGGACGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGSRFGG*VPGRPG
Trigger: GCCAGGACGTCCGGGGACCAAGCCCCCGAAGCGGGA...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS TCA 90 bp CAGGGGCCTAGGGCGCTCGGCCTCGTCCGATGTCTCTGTGGCCTCTaGGTCTTCAACAGCAGGCAGGGCAGGCAGCCCGCGCCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QGPRALGLVRCLCGL*VFNSRQGRQPAPGR
Trigger: CCTGCCCGGCGCGGGCTGCCTGCCCTGCCTGCTGTTGAAGACTCAGAGGCCACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp TCGGCCGGCGCCCTGGGAGGCTCGGAAGTTGCGGCCCAGGGAGCTTaGAGATTGGCCGCATCCCCCGGAGAGTCGGCTTCGCCACGACGA +
Preference number: 5 (lower is better)
Translates to: SAGALGGSEVAAQGA*RLAASPGESASPRR
Trigger: TCGTCGTGGCGAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGCCGGCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS GCA 90 bp GAGCACACGGCCCACGGTGCCTGCTGTCGGGAGGGTCTTGCCCTCTaGCAGCTCTGCTTCTTCCCTGGGTGGCAGCCGGGCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: EHTAHGACCREGLAL*QLCFFPGWQPGLLS
Trigger: GGAGAGGAGGCCCGGCTGCCACCCAGGGAAGAAGCAGAGCTGGCAGAGGGCAAGACCCTCCCGACAGCAGGCACCGTGGGCCGTGTGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 90 bp CCGGCCTCCTCGGGACACCTCCTCGGGCCAACTCTTGACCAGAGATaGGTGGTCCAGGGGCAGGTTGCGGATGGTCCGCTCCACGCCCCG +
Preference number: 5 (lower is better)
Translates to: PASSGHLLGPTLDQR*VVQGQVADGPLHAP
Trigger: CGGGGCGTGGAGCGGACCATCCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTCCCGAGGAGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp GCAGGGGGTGCCGTTGCCAGGAGTGCCCACCGCAGTGGTGCCTGCTaGGTAGGCAGCTGTGTCAGAGGAAGAGCGGCGGCGGGATTCGGC +
Preference number: 5 (lower is better)
Translates to: AGGAVARSAHRSGAC*VGSCVRGRAAAGFG
Trigger: GCCGAATCCCGCCGCCGCTCTTCCTCTGACACAGCTGCCTACCCAGCAGGCACCACTGCGGTGGGCACTCCTGGCAACGGCACCCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS TCA 90 bp CTCTGCTTCTTCCCTGGGTGGCAGCCGGGCCTCCTCTCCCGAGACTaGGGAGGAGGGCAGGGGCTCGGCTGCCATTGGCATGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LCFFPGWQPGLLSRD*GGGQGLGCHWHGQV
Trigger: CACCTGCCCATGCCAATGGCAGCCGAGCCCCTGCCCTCCTCCTCAGTCTCGGGAGAGGAGGCCCGGCTGCCACCCAGGGAAGAAGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 90 bp CAGCCCGGCTCCGGCCTCCTCGGGACACCTCCTCGGGCCAACTCTTaGCCAGAGATGCGTGGTCCAGGGGCAGGTTGCGGATGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: QPGSGLLGTPPRANS*PEMRGPGAGCGWSA
Trigger: AGCGGACCATCCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTCCCGAGGAGGCCGGAGCCGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCCGCTGCTGCTGCAGTaGCTGCGGCTTGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPPLLLQ*LRLGLL
Trigger: GAGGAGCCCAAGCCGCAGCAACTGCAGCAGCAGCGG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS TCA 90 bp GGCCTGCAGGCCTTGCTGGAGACGCCTCCTGTTCGGGCAGGGGTGTaGCTGGGGAGCCTGCAACCCTTTCCGGCACTGGCACCTCCACAG +
Preference number: 5 (lower is better)
Translates to: GLQALLETPPVRAGV*LGSLQPFPALAPPQ
Trigger: CTGTGGAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAACAGGAGGCGTCTCCAGCAAGGCCTGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 90 bp TGCTGGAGACGCCTCCTGTTCGGGCAGGGGTGTGACTGGGGAGCCTaGAACCCTTTCCGGCACTGGCACCTCCACAGGTGCTGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: CWRRLLFGQGCDWGA*NPFRHWHLHRCWRG
Trigger: CCCACGCCAGCACCTGTGGAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAACAGGAGGCGTCTCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp GCGCCCTGGGAGGCTCGGAAGTTGCGGCCCAGGGAGCTTGGAGATTaGCCGCATCCCCCGGAGAGTCGGCTTCGCCACGACGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: APWEARKLRPRELGD*PHPPESRLRHDDLD
Trigger: ATCTAGATCGTCGTGGCGAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS CCA 90 bp TTCGGGCAGGGGTGTGACTGGGGAGCCTGCAACCCTTTCCGGCACTaGCACCTCCACAGGTGCTGGCGTGGGCACTGGGACTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: FGQGCDWGACNPFRH*HLHRCWRGHWDFSG
Trigger: CCCAGAGAAGTCCCAGTGCCCACGCCAGCACCTGTGGAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp TGCAGGCCTTGCTGGAGACGCCTCCTGTTCGGGCAGGGGTGTGACTaGGGAGCCTGCAACCCTTTCCGGCACTGGCACCTCCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: CRPCWRRLLFGQGCD*GACNPFRHWHLHRC
Trigger: GCACCTGTGGAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAACAGGAGGCGTCTCCAGCAAGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATGCGGCCCAGGGAGCTaGGAGATTGGCCGCATCCCC +
Preference number: 5 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTCGPGS*EIGRIP
Trigger: GGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGTGCTTGCCCTGGGTCTaGCCTCGCTCTTCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRCLPWV*PRSSSR
Trigger: GCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCA...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS GCA 90 bp CTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTTGCCCTGGGTCTTaGCTCGCTCTTCGTCCCGCTTCGGGGGCTTGGTCCCCGGACGTC +
Preference number: 5 (lower is better)
Translates to: LRCPEQRTCGACPGS*LALRPASGAWSPDV
Trigger: GACGTCCGGGGACCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp TCCTCCCCTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTTGCCCTaGGTCTTGCCTCGCTCTTCGTCCCGCTTCGGGGGCTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SSPSLSRAKDLRCLP*VLPRSSSRFGGLVP
Trigger: GGGGACCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGGGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp CAGGTTGGTGAGTGCAGGGTGTTAAGGAAGAGAACGGCTCCTCTCTaGCCACCTGCGTCCCAGCCAAAGGAGAGGGCGGGGCCCACGCCG +
Preference number: 5 (lower is better)
Translates to: QVGECRVLRKRTAPL*PPASQPKERAGPTP
Trigger: CGGCGTGGGCCCCGCCCTCTCCTTTGGCTGGGACGCAGGTGGCCAGAGAGGAGCCGTTCTCTTCCTTAACACCCTGCACTCACCAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640410.1
CDS GCA 90 bp TATCTTGTCGGCTGCTGGAGAAGCTTGTGTCCTGGGAGCAGGGGGTaGCGTTGCCAGGAGTGCCCACCGCAGTGGTGCCTGCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: YLVGCWRSLCPGSRG*RCQECPPQWCLLGR
Trigger: CCTACCCAGCAGGCACCACTGCGGTGGGCACTCCTGGCAACGGCACCCCCTGCTCCCAGGACACAAGCTTCTCCAGCAGCCGACAAGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS GCA 90 bp CTTCATCTCCTGGACCAGCATGGCGAGCACACGGCCCACGGTGCCTaGTGTCGGGAGGGTCTTGCCCTCTGCCAGCTCTGCTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LHLLDQHGEHTAHGA*CREGLALCQLCFFP
Trigger: AGGGAAGAAGCAGAGCTGGCAGAGGGCAAGACCCTCCCGACAGCAGGCACCGTGGGCCGTGTGCTCGCCATGCTGGTCCAGGAGATGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 90 bp ATGCCTCCTCCCCTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTTaGCCTGGGTCTTGCCTCGCTCTTCGTCCCGCTTCGGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: MPPPLRCPEQRTCGA*PGSCLALRPASGAW
Trigger: CCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGGGGAGGAGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGATCCAGAGCAAAGGACTaGCGGTGCTTGCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGSRAKD*RCLPWV
Trigger: GACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGA...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGCTGGGCCGGGAAACTaGGCCTGCGGCGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCAGPGN*ACGGVA
Trigger: AGCCACACCGCCGCAGGCCAAGTTTCCCGGCCCAGC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS GCA 90 bp TGCTCTTCATCTCCTGGACCAGCATGGCGAGCACACGGCCCACGGTaGCTGCTGTCGGGAGGGTCTTGCCCTCTGCCAGCTCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: CSSSPGPAWRAHGPR*LLSGGSCPLPALLL
Trigger: AAGAAGCAGAGCTGGCAGAGGGCAAGACCCTCCCGACAGCAGGCACCGTGGGCCGTGTGCTCGCCATGCTGGTCCAGGAGATGAAGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp GTTCGTCCCCTGAGTGTCCACGCCCTCCAGCTGCCGGGCCGAGACTaGGCACACGTCCAGGTACTTGTCCTTCTCCTTCTTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: VRPLSVHALQLPGRD*AHVQVLVLLLLADG
Trigger: CCCATCAGCAAGAAGGAGAAGGACAAGTACCTGGACGTGTGCCCAGTCTCGGCCCGGCAGCTGGAGGGCGTGGACACTCAGGGGACGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000640410.1
ENST00000684162.1
CDS-3UTR CAA 90 bp CCCAACCCCACGCTTGGAGATGGGGGCATGTGGGCCCTGCTGAGCCCACTAAGGCGTGTAGGGGGTTCCTaGGGAGGACTGAGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: PNPTLGDGGMWALLSPLRRVGGS*GGLRCE
Trigger: TTCACACCTCAGTCCTCCCAAGGAACCCCCTACACG...CCTTAGTGGGCTCAGCAGGGCCCACATGCCCCCATCTCCAAGCGTGGGGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACGTTCTCCACCATCTaGCGGTTGAGGTCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGTFSTI*RLRSRC
Trigger: GCAGCGAGACCTCAACCGCAAGATGGTGGAGAACGT...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTCCAGCCTCCTTCTCTaGTTCAGGGTCGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGSSLLL*FRVVFI
Trigger: GATGAAGACGACCCTGAACAAGAGAAGGAGGCTGGA...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATCCTCGGGCCAACTCTaGACCAGAGATGCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTSSGQL*TRDAWS
Trigger: GGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS TCA 90 bp TCTGAGAAGGCCTGCGCAGGGCAGGGTCCAAGGCAGGATCCACGATaGGCTTGTAGTTCCGCCACTGGAAGCTCGGGGCCTTCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: SEKACAGQGPRQDPR*ACSSATGSSGPSAH
Trigger: ATGGGCAGAAGGCCCCGAGCTTCCAGTGGCGGAACTACAAGCTCATCGTGGATCCTGCCTTGGACCCTGCCCTGCGCAGGCCTTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262519.14
ENST00000452917.3
ENST00000682768.1
ENST00000684162.1
CDS CCA 90 bp AAGGAAGATGGGGTATCTTGTCGGCTGCTGGAGAAGCTTGTGTCCTaGGAGCAGGGGGTGCCGTTGCCAGGAGTGCCCACCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: KEDGVSCRLLEKLVS*EQGVPLPGVPTAVV
Trigger: CACCACTGCGGTGGGCACTCCTGGCAACGGCACCCCCTGCTCCCAGGACACAAGCTTCTCCAGCAGCCGACAAGATACCCCATCTTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS-3UTR CAA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAGTAAGGTGGAGGTTTTaGACCGTTTCCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGVRWRF*TVSLAP
Trigger: GGGCGCCAAGGAAACGGTCAAAAACCTCCACCTTAC...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CTGAGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGATGGGCATGGATGATGTaGCCCATGACGGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LSRGVTPGWKGDPQGLAGWAWMM*PMTEVR
Trigger: CCTTACCTCCGTCATGGGCAACATCATCCATGCCCA...TCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACATCTTTATCCTCCTCCTaGGCTTGCTGCTTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTSLSSS*ACCLAA
Trigger: CGCGGCCAAGCAGCAAGCCAAGGAGGAGGATAAAGA...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGGGGCCTGCAGGCCTaGCTGGAGACGCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCWGLQA*LETPPV
Trigger: AACAGGAGGCGTCTCCAGCAAGGCCTGCAGGCCCCA...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAGTCCAGCCCAGCAAAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGCACACGTCCAGGTACTaGTCCTTCTCCTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TVQPSKRDPPRHPGLAEPHTSRY*SFSFLL
Trigger: CAGCAAGAAGGAGAAGGACAAGTACCTGGACGTGTG...CGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTTTGCTGGGCTGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCAGGGAGCTTGGAGATaGGCCGCATCCCCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: QDRICTGRHPRFPQETAAQGAWR*AASPGE
Trigger: CTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTG...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGGCTGCACCCGAGCCTaGGAACTTCTCACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCGCTRA*ELLTQG
Trigger: GCCCTGAGTGAGAAGTTCCAAGGCTCGGGTGCAGCC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGTGGAAGTTCTTCTTCCGGAACTaGAGCTGGTTGAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: THPAILAWLSRGVTPGWKFFFRN*SWLSFS
Trigger: GCTGAAACTCAACCAGCTCAAGTTCCGGAAGAAGAA...CTTCCACCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS TCA 90 bp CCGAGACTGGGCACACGTCCAGGTACTTGTCCTTCTCCTTCTTGCTaGTGGGGTAGTAGCCTTCGCTGCGGGCTGAGCCTGTCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: PRLGTRPGTCPSPSC*WGSSLRCGLSLSGA
Trigger: AGCACCAGACAGGCTCAGCCCGCAGCGAAGGCTACTACCCCATCAGCAAGAAGGAGAAGGACAAGTACCTGGACGTGTGCCCAGTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000640410.1
ENST00000684162.1
CDS TCA 90 bp CGCCCACACTCAGGATATTTGTGTGATGGACCCAGTGAGTGTCGTTaGGCCAGTCAGCCCCGCTTGTCTGCTGCAGCAGCCGCTCGTACG +
Preference number: 5 (lower is better)
Translates to: RPHSGYLCDGPSECR*ASQPRLSAAAAART
Trigger: CGTACGAGCGGCTGCTGCAGCAGACAAGCGGGGCTGACTGGCTCAACGACACTCACTGGGTCCATCACACAAATATCCTGAGTGTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640410.1
CDS-3UTR CAA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTCTGACCGCCGGGGCTaGAAGGAGGTTGAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCSDRRG*KEVEVV
Trigger: CACCACTTCAACCTCCTTCAAGCCCCGGCGGTCAGA...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGTAGTGCCCCCGCTCTaGGCCCAGTCCACGAGGGAC +
Preference number: 5 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVVVPPL*AQSTRD
Trigger: GTCCCTCGTGGACTGGGCCAAGAGCGGGGGCACTAC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGTGGGAGGCTCGGAAGTaGCGGCCCAGGGAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVWEARK*RPRELG
Trigger: TCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCA...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAAGGGACCCACCCCGCCATCCTGGCCTGGCTGAGCCGGGGAGTGACACCAGGGAATACGCTGGGTAGTTaGCATCAGAACTACGAAACT +
Preference number: 5 (lower is better)
Translates to: KGTHPAILAWLSRGVTPGNTLGS*HQNYET
Trigger: AGTTTCGTAGTTCTGATGCAAACTACCCAGCGTATT...CCCTGGTGTCACTCCCCGGCTCAGCCAGGCCAGGATGGCGGGGTGGGTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CCAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCGAGGAGGTAGGCAGGTaGGTGGGGAGGATAACCAAG +
Preference number: 5 (lower is better)
Translates to: PGQNLYRPAPQVSTGNSCEEVGR*VGRITK
Trigger: CTTGGTTATCCTCCCCACCAACCTGCCTACCTCCTC...GCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS GCA 90 bp ACCCAGAAGGCACCTCACTCCCTGTATCTCTGGCCCCAAGGACCATaGTGCTGTTCTCTTCCTCCTCCTCTGTGTCAGAGGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: TQKAPHSLYLWPQGP*CCSLPPPLCQRPRR
Trigger: CCTTCTTGGCCTCTGACACAGAGGAGGAGGAAGAGAACAGCAGCATGGTCCTTGGGGCCAGAGATACAGGGAGTGAGGTGCCTTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp GGGGGTTCCTTGGGAGGACTGAGGTGTGAACTGGCCAAAGGAAGATaGGGTATCTTGTCGGCTGCTGGAGAAGCTTGTGTCCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GGSLGGLRCELAKGR*GILSAAGEACVLGA
Trigger: TGCTCCCAGGACACAAGCTTCTCCAGCAGCCGACAAGATACCCCATCTTCCTTTGGCCAGTTCACACCTCAGTCCTCCCAAGGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CCA 90 bp AGGACGAGGAGGATGAGGACGAGGAGGAGGAGGAGGATGAGGAGCTaGAAGAGCTGCTGCTCTCGGAGTCTGATGTGCTGTCATTTTCGC +
Preference number: 5 (lower is better)
Translates to: RTRRMRTRRRRRMRS*KSCCSRSLMCCHFR
Trigger: GCGAAAATGACAGCACATCAGACTCCGAGAGCAGCAGCTCTTCCAGCTCCTCATCCTCCTCCTCCTCCTCGTCCTCATCCTCCTCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACACTTCCTGATCCATCTTaGCTCATTTACACTGCGCGA +
Preference number: 5 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTLPDPS*LIYTAR
Trigger: TCGCGCAGTGTAAATGAGCAAAGATGGATCAGGAAG...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTGGAAGATGGGGTATCTaGTCGGCTGCTGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: QDRICTGRHPRFPQETAAGRWGI*SAAGEA
Trigger: AGCTTCTCCAGCAGCCGACAAGATACCCCATCTTCC...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGATCCTCCTCCTTGGCTaGCTGCTTGGCCGCGTTCTG +
Preference number: 5 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVILLLG*LLGRVL
Trigger: CAGAACGCGGCCAAGCAGCAAGCCAAGGAGGAGGAT...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS GCA 90 bp ATGAGGACGAGGAGGAGGAGGAGGATGAGGAGCTGGAAGAGCTGCTaGTCTCGGAGTCTGATGTGCTGTCATTTTCGCCATCTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: MRTRRRRRMRSWKSC*SRSLMCCHFRHLSQ
Trigger: CTGACTCAGATGGCGAAAATGACAGCACATCAGACTCCGAGAGCAGCAGCTCTTCCAGCTCCTCATCCTCCTCCTCCTCCTCGTCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 90 bp AGGATGAGGACGAGGAGGAGGAGGAGGATGAGGAGCTGGAAGAGCTaGTGCTCTCGGAGTCTGATGTGCTGTCATTTTCGCCATCTGAGT +
Preference number: 5 (lower is better)
Translates to: RMRTRRRRRMRSWKS*CSRSLMCCHFRHLS
Trigger: ACTCAGATGGCGAAAATGACAGCACATCAGACTCCGAGAGCAGCAGCTCTTCCAGCTCCTCATCCTCCTCCTCCTCCTCGTCCTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 90 bp CCTCCTTCTCTTGTTCAGGGTCGTCTTCATCTTCCTCAGCAGGAGTaGAGGGACGAGGCCTCTTTTCCTCACTGGCCTCGGAAATTTCCG +
Preference number: 5 (lower is better)
Translates to: PPSLVQGRLHLPQQE*RDEASFPHWPRKFP
Trigger: CGGAAATTTCCGAGGCCAGTGAGGAAAAGAGGCCTCGTCCCTCCACTCCTGCTGAGGAAGATGAAGACGACCCTGAACAAGAGAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGGGGCTCGGCTGCCATaGGCATGGGCAGGTGGTAGG +
Preference number: 5 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKGARLP*AWAGGR
Trigger: CCTACCACCTGCCCATGCCAATGGCAGCCGAGCCCC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTTCTTTCCGCTTTACCTaGAATGAAGGCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: QDRICTGRHPRFPQETAASFRFT*NEGSRR
Trigger: CCTGCGGCTGCCTTCATTCAAGGTAAAGCGGAAAGA...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGCCAGTCAGCCCCGCTaGTCTGCTGCAGCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKASQPR*SAAAAA
Trigger: AGCGGCTGCTGCAGCAGACAAGCGGGGCTGACTGGC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AGCCGGGGAGTGACACCAGGGTGGAAGGGTGACCCTCAGGGTCTGGCAGGAACAGTATTTCATTCGTTGTaGTCCTTTGATGTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SRGVTPGWKGDPQGLAGTVFHSL*SFDVKL
Trigger: CAGCTTGACATCAAAGGACAACAACGAATGAAATAC...TGTTCCTGCCAGACCCTGAGGGTCACCCTTCCACCCTGGTGTCACTCCCCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp GTACACGCAGGGCGTAAGGGGAAGTCCCCATTAACACAAAGCAAGAGGACTGTGGCCAAGAAGGAAAACTaGGAGCGCTGCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VHAGRKGKSPLTQSKRTVAKKEN*ERCSFS
Trigger: GCTGAAGGAGCAGCGCTCCAAGTTTTCCTTCTTGGC...CACAGTCCTCTTGCTTTGTGTTAATGGGGACTTCCCCTTACGCCCTGCGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp CAGGACAGAATCTGTACAGGCCGGCACCCCAGGTTTCCACAGGAAACAGCTGCTAGACACGGGATCTTGTaGTCTTCCAGTGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: QDRICTGRHPRFPQETAARHGIL*SSSGNL
Trigger: CAAGTTCCCACTGGAAGACAACAAGATCCCGTGTCT...AGCAGCTGTTTCCTGTGGAAACCTGGGGTGCCGGCCTGTACAGATTCTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGAGCAGGGGGTGCCGTaGCCAGGAGTGCCCACCGCA +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQEQGVP*PGVPTA
Trigger: TGCGGTGGGCACTCCTGGCAACGGCACCCCCTGCTC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAGCGTTCTGGAATGGCTaGGCCTTCTCCTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKAFWNG*AFSSLL
Trigger: GAGCAAGGAGGAGAAGGCCAAGCCATTCCAGAACGC...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS CCA 90 bp ATGTGCTGTCATTTTCGCCATCTGAGTCAGCATACAGAGAACATTTaGAAGACGAATCGCTTTCCTCGTCCTCGCCATCCGACACCTCTG +
Preference number: 5 (lower is better)
Translates to: MCCHFRHLSQHTENI*KTNRFPRPRHPTPL
Trigger: CAGAGGTGTCGGATGGCGAGGACGAGGAAAGCGATTCGTCTTCCAAATGTTCTCTGTATGCTGACTCAGATGGCGAAAATGACAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGCTGTCGGGAGGGTCTaGCCCTCTGCCAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQAVGRV*PSASSA
Trigger: AGCAGAGCTGGCAGAGGGCAAGACCCTCCCGACAGC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCTTCTGTCCATTTGCCTaGGGAGACTCCCGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: IIKMWRRVCAINICTVQPFCPFA*GDSRVA
Trigger: GGCTACCCGGGAGTCTCCCAAGGCAAATGGACAGAA...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGAAGGACTTGCGGTGCTaGCCCTGGGTCTTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQKDLRC*PWVLPR
Trigger: GCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCATGGCAACGGGGGTCTaGGAGGTCTTCGACTGGTAT +
Preference number: 5 (lower is better)
Translates to: IIKMWRRVCAINICTVQPMATGV*EVFDWY
Trigger: ATACCAGTCGAAGACCTCCAAGACCCCCGTTGCCAT...GGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGTTTTTGACCGTTTCCTaGGCGCCCCGAGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQFLTVS*APRVLV
Trigger: CACCAGCACTCGGGGCGCCAAGGAAACGGTCAAAAA...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAATTCGTTGTTGTCCTTaGATGTCAAGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKIRCCP*MSSWAW
Trigger: CCATGCCCAGCTTGACATCAAAGGACAACAACGAAT...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAACGTTGTCATTCAGCCTaGCAAAAGTCACTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKRCHSA*QKSLPS
Trigger: TGAAGGAAGTGACTTTTGCAAGGCTGAATGACAACG...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGATGAATCTGGCCAGGTaGCCACACTTGGTGGCATCG +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQMNLAR*PHLVAS
Trigger: CGATGCCACCAAGTGTGGCAACCTGGCCAGATTCAT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp AAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGCCCAGCAAAAATATACTTTGAGTCGTaGACACTGAAGTGGACTCCA +
Preference number: 5 (lower is better)
Translates to: KCGVGFALLTYVQSSPAKIYFES*TLKWTP
Trigger: TGGAGTCCACTTCAGTGTCAACGACTCAAAGTATAT...TTTTGCTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGAAGGTCTCCCGCACGTaGTCATTCAGCCTTGCAAAA +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQKVSRT*SFSLAK
Trigger: TTTTGCAAGGCTGAATGACAACGTGCGGGAGACCTT...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGAAAAGTCTCTGTTTTaGGACCTGACATGGCAACGG +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQEKSLF*DLTWQR
Trigger: CCGTTGCCATGTCAGGTCCAAAAACAGAGACTTTTC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS-3UTR CAA 90 bp ACAATTATAAAAATGTGGCGTCGGGTTTGCGCTATTAACATATGTACAGTCCAGGCATACAGAGAACATTaGGAAGACGAATCGCTTTCC +
Preference number: 5 (lower is better)
Translates to: TIIKMWRRVCAINICTVQAYREH*EDESLS
Trigger: GGAAAGCGATTCGTCTTCCAAATGTTCTCTGTATGC...CTGGACTGTACATATGTTAATAGCGCAAACCCGACGCCACATTTTTATAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS CCA 72 bp GGTCCGCTCCACGCCCCGGGGAGCCTTGCGGGAGGCTaGGCCGGGAAACTTGGCCTGCGGCGGTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: GPLHAPGSLAGG*AGKLGLRRCGW
Trigger: CCAGCCACACCGCCGCAGGCCAAGTTTCCCGGCCCAGCCTCCCGCAAGGCTCCCCGGGGCGTGGAGCGGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp GGCTGGGCCGGGAAACTTGGCCTGCGGCGGTGTGGCTaGAGGGGGCTCCGGGGCTGGCACCACCTCGATGGC +
Preference number: 6 (lower is better)
Translates to: GWAGKLGLRRCG*RGLRGWHHLDG
Trigger: GCCATCGAGGTGGTGCCAGCCCCGGAGCCCCCTCCAGCCACACCGCCGCAGGCCAAGTTTCCCGGCCCAGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp CTCGGCCGGCGCCCTGGGAGGCTCGGAAGTTGCGGCCCAGGGAGCTaGGAGATTGGCCGCATCCCCCGGAGAGTCGGCTTCGCCACGACG +
Preference number: 6 (lower is better)
Translates to: LGRRPGRLGSCGPGS*EIGRIPRRVGFATT
Trigger: CGTCGTGGCGAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGCCGGCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS GCA 72 bp CTTCGCCTCGGCCGGCGCCCTGGGAGGCTCGGAAGTTaGGGCCCAGGGAGCTTGGAGATTGGCCGCATCCCC +
Preference number: 6 (lower is better)
Translates to: LRLGRRPGRLGS*GPGSLEIGRIP
Trigger: GGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGCCGGCCGAGGCGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS GCA 72 bp ATGGCGGAGGTACCGATGGCGCTCAGCAGCCGCCGCTaGTCGGACCGGCGCTCGGACAGCACGCGGTTCGTC +
Preference number: 6 (lower is better)
Translates to: MAEVPMALSSRR*SDRRSDSTRFV
Trigger: GACGAACCGCGTGCTGTCCGAGCGCCGGTCCGAGCAGCGGCGGCTGCTGAGCGCCATCGGTACCTCCGCCAT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000640410.1
ENST00000684162.1
CDS CAA 72 bp GCTTCGCCTCGGCCGGCGCCCTGGGAGGCTCGGAAGTaGCGGCCCAGGGAGCTTGGAGATTGGCCGCATCCC +
Preference number: 6 (lower is better)
Translates to: ASPRPAPWEARK*RPRELGDWPHP
Trigger: GGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGCCGGCCGAGGCGAAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS CAA 90 bp AGGGTAGCGGCTTCGCCTCGGCCGGCGCCCTGGGAGGCTCGGAAGTaGCGGCCCAGGGAGCTTGGAGATTGGCCGCATCCCCCGGAGAGT +
Preference number: 6 (lower is better)
Translates to: RVAASPRPAPWEARK*RPRELGDWPHPPES
Trigger: ACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGCCGGCCGAGGCGAAGCCGCTACCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS TCA 72 bp TCCACCAGGTTCTGGAGGCTCCGGGGGTGGAGCCTCTaGGGCAGGAGGCCGGTAGTCCTGGTCGGTGGGCCG +
Preference number: 6 (lower is better)
Translates to: STRFWRLRGWSL*GRRPVVLVGGP
Trigger: CGGCCCACCGACCAGGACTACCGGCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp GCACAGGGTCTGCATTCGCACTTTCGCCACAGGCGCTaGCGGGGGACCCACGGGGCCGAGGGTAGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: AQGLHSHFRHRR*RGTHGAEGSGF
Trigger: GAAGCCGCTACCCTCGGCCCCGTGGGTCCCCCGGCAGCGCCTGTGGCGAAAGTGCGAATGCAGACCCTGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS CCA 72 bp CACCACCACCTCGGGGGCCTCCAGGACCTCATCAGCTaGGGAACTGAAGAGGGCGGCGGGTGCGGGCACTGG +
Preference number: 6 (lower is better)
Translates to: HHHLGGLQDLIS*GTEEGGGCGHW
Trigger: CCAGTGCCCGCACCCGCCGCCCTCTTCAGTTCCCCAGCTGATGAGGTCCTGGAGGCCCCCGAGGTGGTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp CCAGCCCGGCTCCGGCCTCCTCGGGACACCTCCTCGGGCCAACTCTaGACCAGAGATGCGTGGTCCAGGGGCAGGTTGCGGATGGTCCGC +
Preference number: 6 (lower is better)
Translates to: PARLRPPRDTSSGQL*TRDAWSRGRLRMVR
Trigger: GCGGACCATCCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTCCCGAGGAGGCCGGAGCCGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp CTGGACCAGCATGGCGAGCACACGGCCCACGGTGCCTaGTGTCGGGAGGGTCTTGCCCTCTGCCAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LDQHGEHTAHGA*CREGLALCQLC
Trigger: GCAGAGCTGGCAGAGGGCAAGACCCTCCCGACAGCAGGCACCGTGGGCCGTGTGCTCGCCATGCTGGTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp GCCCTGGGAGGCTCGGAAGTTGCGGCCCAGGGAGCTTaGAGATTGGCCGCATCCCCCGGAGAGTCGGCTTCG +
Preference number: 6 (lower is better)
Translates to: ALGGSEVAAQGA*RLAASPGESAS
Trigger: CGAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS CAA 72 bp CGCCCTGGGAGGCTCGGAAGTTGCGGCCCAGGGAGCTaGGAGATTGGCCGCATCCCCCGGAGAGTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: RPGRLGSCGPGS*EIGRIPRRVGF
Trigger: GAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS CAA 90 bp GGCGCCCTGGGAGGCTCGGAAGTTGCGGCCCAGGGAGCTTGGAGATaGGCCGCATCCCCCGGAGAGTCGGCTTCGCCACGACGATCTAGA +
Preference number: 6 (lower is better)
Translates to: GALGGSEVAAQGAWR*AASPGESASPRRSR
Trigger: TCTAGATCGTCGTGGCGAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTCCCAGGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS GCA 72 bp TTGTGTCCTGGGAGCAGGGGGTGCCGTTGCCAGGAGTaGCCACCGCAGTGGTGCCTGCTGGGTAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LCPGSRGCRCQE*PPQWCLLGRQL
Trigger: CAGCTGCCTACCCAGCAGGCACCACTGCGGTGGGCACTCCTGGCAACGGCACCCCCTGCTCCCAGGACACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS GCA 72 bp TCTCCTGGACCAGCATGGCGAGCACACGGCCCACGGTaGCTGCTGTCGGGAGGGTCTTGCCCTCTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SPGPAWRAHGPR*LLSGGSCPLPA
Trigger: AGCTGGCAGAGGGCAAGACCCTCCCGACAGCAGGCACCGTGGGCCGTGTGCTCGCCATGCTGGTCCAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp CGCCTCCTGTTCGGGCAGGGGTGTGACTGGGGAGCCTaGAACCCTTTCCGGCACTGGCACCTCCACAGGTGC +
Preference number: 6 (lower is better)
Translates to: RLLFGQGCDWGA*NPFRHWHLHRC
Trigger: GCACCTGTGGAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAACAGGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp GAGGCTCGGAAGTTGCGGCCCAGGGAGCTTGGAGATTaGCCGCATCCCCCGGAGAGTCGGCTTCGCCACGAC +
Preference number: 6 (lower is better)
Translates to: EARKLRPRELGD*PHPPESRLRHD
Trigger: GTCGTGGCGAAGCCGACTCTCCGGGGGATGCGGCCAATCTCCAAGCTCCCTGGGCCGCAACTTCCGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000682768.1
CDS CCA 72 bp GGGTCTTGCCTCGCTCTTCGTCCCGCTTCGGGGGCTTaGTCCCCGGACGTCCTGGCTCTCCAGCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GSCLALRPASGA*SPDVLALQPPS
Trigger: AGAAGGAGGCTGGAGAGCCAGGACGTCCGGGGACCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp GGGTGTGACTGGGGAGCCTGCAACCCTTTCCGGCACTaGCACCTCCACAGGTGCTGGCGTGGGCACTGGGAC +
Preference number: 6 (lower is better)
Translates to: GCDWGACNPFRH*HLHRCWRGHWD
Trigger: GTCCCAGTGCCCACGCCAGCACCTGTGGAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp CTGGAGAAGCTTGTGTCCTGGGAGCAGGGGGTGCCGTaGCCAGGAGTGCCCACCGCAGTGGTGCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LEKLVSWEQGVP*PGVPTAVVPAG
Trigger: CCCAGCAGGCACCACTGCGGTGGGCACTCCTGGCAACGGCACCCCCTGCTCCCAGGACACAAGCTTCTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CAA 72 bp CTCCGGCCTCCTCGGGACACCTCCTCGGGCCAACTCTaGACCAGAGATGCGTGGTCCAGGGGCAGGTTGCGG +
Preference number: 6 (lower is better)
Translates to: LRPPRDTSSGQL*TRDAWSRGRLR
Trigger: CCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTCCCGAGGAGGCCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp AGAGCGGCGGCGGGATTCGGCCGTCTCAGTGGCTGCACCCGAGCCTaGGAACTTCTCACTCAGGGCCTTGCCCCCAGTGGGCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: RAAAGFGRLSGCTRA*ELLTQGLAPSGHSL
Trigger: CAGACTGTGCCCACTGGGGGCAAGGCCCTGAGTGAGAAGTTCCAAGGCTCGGGTGCAGCCACTGAGACGGCCGAATCCCGCCGCCGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CAA 90 bp AGGGGGCGGCGGCCCATCAGGTCTGGGTGGGAGGAGGTAGGCAGGTaGGTGGGGAGGATAACCAAGAGGAAGGGACGCCAGGTAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RGRRPIRSGWEEVGR*VGRITKRKGRQVGR
Trigger: CCTCCCTACCTGGCGTCCCTTCCTCTTGGTTATCCTCCCCACCAACCTGCCTACCTCCTCCCACCCAGACCTGATGGGCCGCCGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp GCCTTGCTGGAGACGCCTCCTGTTCGGGCAGGGGTGTaGCTGGGGAGCCTGCAACCCTTTCCGGCACTGGCA +
Preference number: 6 (lower is better)
Translates to: ALLETPPVRAGV*LGSLQPFPALA
Trigger: TGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAACAGGAGGCGTCTCCAGCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp TCCGGCCTCCTCGGGACACCTCCTCGGGCCAACTCTTaGCCAGAGATGCGTGGTCCAGGGGCAGGTTGCGGA +
Preference number: 6 (lower is better)
Translates to: SGLLGTPPRANS*PEMRGPGAGCG
Trigger: TCCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTCCCGAGGAGGCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp CGGGATTCGGCCGTCTCAGTGGCTGCACCCGAGCCTTaGAACTTCTCACTCAGGGCCTTGCCCCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RDSAVSVAAPEP*NFSLRALPPVG
Trigger: GCCCACTGGGGGCAAGGCCCTGAGTGAGAAGTTCCAAGGCTCGGGTGCAGCCACTGAGACGGCCGAATCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CCA 72 bp TGCTGGAGACGCCTCCTGTTCGGGCAGGGGTGTGACTaGGGAGCCTGCAACCCTTTCCGGCACTGGCACCTC +
Preference number: 6 (lower is better)
Translates to: CWRRLLFGQGCD*GACNPFRHWHL
Trigger: GAGGTGCCAGTGCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCGAACAGGAGGCGTCTCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp GCGGGATTCGGCCGTCTCAGTGGCTGCACCCGAGCCTaGGAACTTCTCACTCAGGGCCTTGCCCCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: AGFGRLSGCTRA*ELLTQGLAPSG
Trigger: CCCACTGGGGGCAAGGCCCTGAGTGAGAAGTTCCAAGGCTCGGGTGCAGCCACTGAGACGGCCGAATCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CAA 90 bp CCTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTTGCCCTGGGTCTaGCCTCGCTCTTCGTCCCGCTTCGGGGGCTTGGTCCCCGGACGT +
Preference number: 6 (lower is better)
Translates to: PSLSRAKDLRCLPWV*PRSSSRFGGLVPGR
Trigger: ACGTCCGGGGACCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp GCCTGCGCAGGGCAGGGTCCAAGGCAGGATCCACGATaGGCTTGTAGTTCCGCCACTGGAAGCTCGGGGCCT +
Preference number: 6 (lower is better)
Translates to: ACAGQGPRQDPR*ACSSATGSSGP
Trigger: AGGCCCCGAGCTTCCAGTGGCGGAACTACAAGCTCATCGTGGATCCTGCCTTGGACCCTGCCCTGCGCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262519.14
ENST00000452917.3
ENST00000682768.1
ENST00000684162.1
CDS GCA 72 bp CCAGAGCAAAGGACTTGCGGTGCTTGCCCTGGGTCTTaGCTCGCTCTTCGTCCCGCTTCGGGGGCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: PEQRTCGACPGS*LALRPASGAWS
Trigger: GGACCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp TCGGGACACCTCCTCGGGCCAACTCTTGACCAGAGATaGGTGGTCCAGGGGCAGGTTGCGGATGGTCCGCTC +
Preference number: 6 (lower is better)
Translates to: SGHLLGPTLDQR*VVQGQVADGPL
Trigger: GAGCGGACCATCCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp TCGCTGTCCAGAGCAAAGGACTTGCGGTGCTTGCCCTaGGTCTTGCCTCGCTCTTCGTCCCGCTTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: SLSRAKDLRCLP*VLPRSSSRFGG
Trigger: GCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp GACACCTCCTCGGGCCAACTCTTGACCAGAGATGCGTaGTCCAGGGGCAGGTTGCGGATGGTCCGCTCCACG +
Preference number: 6 (lower is better)
Translates to: DTSSGQLLTRDA*SRGRLRMVRST
Trigger: CGTGGAGCGGACCATCCGCAACCTGCCCCTGGACCACGCATCTCTGGTCAAGAGTTGGCCCGAGGAGGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp GATGCCTCCTCCCCTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTaGCCCTGGGTCTTGCCTCGCTCTTCGTCCCGCTTCGGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: DASSPSLSRAKDLRC*PWVLPRSSSRFGGL
Trigger: CAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGGGGAGGAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp ACACGGGCCAGGCCCAGGTGCTTGCGCGTACGGGGGTaGAGGAGGATCTCTACCTCTTCCACCTCACCGTAC +
Preference number: 6 (lower is better)
Translates to: TRARPRCLRVRG*RRISTSSTSPY
Trigger: GTACGGTGAGGTGGAAGAGGTAGAGATCCTCCTTCACCCCCGTACGCGCAAGCACCTGGGCCTGGCCCGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS GCA 72 bp CTGCACCCGAGCCTTGGAACTTCTCACTCAGGGCCTTaGCCCCAGTGGGCACAGTCTGAGGGGTGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: LHPSLGTSHSGP*PQWAQSEGCRS
Trigger: GCTCCTACACCCCTCAGACTGTGCCCACTGGGGGCAAGGCCCTGAGTGAGAAGTTCCAAGGCTCGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS GCA 72 bp CCCCTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTTaGCCTGGGTCTTGCCTCGCTCTTCGTCCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: PLRCPEQRTCGA*PGSCLALRPAS
Trigger: CGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp CTTCTGCCCATCTCCCCCACCTTCCTGATCCATCTTTaGTCATTTACACGGCCAGCGGCCCGGGCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: LLPISPTFLIHL*SFTRPAARAEP
Trigger: GGGCTCGGCCCGGGCCGCTGGCCGTGTAAATGAGCAAAGATGGATCAGGAAGGTGGGGGAGATGGGCAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452917.3
CDS CCA 72 bp GAGTGCAGGGTGTTAAGGAAGAGAACGGCTCCTCTCTaGCCACCTGCGTCCCAGCCAAAGGAGAGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: ECRVLRKRTAPL*PPASQPKERAG
Trigger: CCCCGCCCTCTCCTTTGGCTGGGACGCAGGTGGCCAGAGAGGAGCCGTTCTCTTCCTTAACACCCTGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640410.1
CDS CAA 72 bp TCCAGAGCAAAGGACTTGCGGTGCTTGCCCTGGGTCTaGCCTCGCTCTTCGTCCCGCTTCGGGGGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: SRAKDLRCLPWV*PRSSSRFGGLV
Trigger: GACCAAGCCCCCGAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp ATCCATCTTTGCTCATTTACATTTCGCCACAGGCGCTaGCGGGGGACCCACGGGGCCGAGGGTAGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: IHLCSFTFRHRR*RGTHGAEGSGF
Trigger: GAAGCCGCTACCCTCGGCCCCGTGGGTCCCCCGGCAGCGCCTGTGGCGAAATGTAAATGAGCAAAGATGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682768.1
CDS GCA 72 bp CTTCTGCCCATCTCCCCCACCTTCCTGATCCATCTTTaGTCATTTACACCGCTCCCGGCGAGCGGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: LLPISPTFLIHL*SFTPLPASGSP
Trigger: GGGGGAGCCGCTCGCCGGGAGCGGTGTAAATGAGCAAAGATGGATCAGGAAGGTGGGGGAGATGGGCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684162.1
CDS CCA 72 bp CTGTCCATTTGCCTTGGGAGACTCCCGGGTAGCCCCTaGCTCCCCGCTCCCTGTAGGTGCCACATCCTCAAA +
Preference number: 6 (lower is better)
Translates to: LSICLGRLPGSP*LPAPCRCHILK
Trigger: TTTGAGGATGTGGCACCTACAGGGAGCGGGGAGCCAGGGGCTACCCGGGAGTCTCCCAAGGCAAATGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp TCCCCTTCGCTGTCCAGAGCAAAGGACTTGCGGTGCTaGCCCTGGGTCTTGCCTCGCTCTTCGTCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: SPSLSRAKDLRC*PWVLPRSSSRF
Trigger: GAAGCGGGACGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp GATGCCTCCTCCCCTTCGCTGTCCAGAGCAAAGGACTaGCGGTGCTTGCCCTGGGTCTTGCCTCGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: DASSPSLSRAKD*RCLPWVLPRSS
Trigger: CGAAGAGCGAGGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGACAGCGAAGGGGAGGAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp TGGCCGCGTTCTGGAATGGCTTGGCCTTCTCCTCCTTaGTCTCCCACCACTGGTCAAAGGCTCCGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: WPRSGMAWPSPP*SPTTGQRLRRP
Trigger: TGGCCTTCGGAGCCTTTGACCAGTGGTGGGAGAGCAAGGAGGAGAAGGCCAAGCCATTCCAGAACGCGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp GCTGAGGCGGCAATCAATCCCTTGCCCTGCCGCAGCTaGTGGAGCCGAGTTAACATCTGGGTCTGCATCTGG +
Preference number: 6 (lower is better)
Translates to: AEAAINPLPCRS*WSRVNIWVCIW
Trigger: CCAGATGCAGACCCAGATGTTAACTCGGCTCCATCAGCTGCGGCAGGGCAAGGGATTGATTGCCGCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp GGCACACGTCCAGGTACTTGTCCTTCTCCTTCTTGCTaGTGGGGTAGTAGCCTTCGCTGCGGGCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: GTRPGTCPSPSC*WGSSLRCGLSL
Trigger: CAGGCTCAGCCCGCAGCGAAGGCTACTACCCCATCAGCAAGAAGGAGAAGGACAAGTACCTGGACGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000640410.1
ENST00000684162.1
CDS GCA 72 bp CTTCTGCCCATCTCCCCCACCTTCCTGATCCATCTTTaGTCATTTACACTGCGCGAGGCCCAGCGGGCACAG +
Preference number: 6 (lower is better)
Translates to: LLPISPTFLIHL*SFTLREAQRAQ
Trigger: CTGTGCCCGCTGGGCCTCGCGCAGTGTAAATGAGCAAAGATGGATCAGGAAGGTGGGGGAGATGGGCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262519.14
CDS GCA 72 bp CCCCACCTCAGTTTAGGGAGCCCCGGCAGCTCTCTGTaGCACACAGACACGGGATCTTGTTGTCTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: PHLSLGSPGSSL*HTDTGSCCLPV
Trigger: CACTGGAAGACAACAAGATCCCGTGTCTGTGTGGCACAGAGAGCTGCCGGGGCTCCCTAAACTGAGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp TCGTCATCCTCCTCATCCTTCTCCGAGGAGGACTCCTaGGATGCCTCCTCCCCTTCGCTGTCCAGAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SSSSSSFSEEDS*DASSPSLSRAK
Trigger: CTTTGCTCTGGACAGCGAAGGGGAGGAGGCATCCCAGGAGTCCTCCTCGGAGAAGGATGAGGAGGATGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp ATGACGGAGGTAAGGTGGAGGTTTTTGACCGTTTCCTaGGCGCCCCGAGTGCTGGTGAAGAGCACACGGGCC +
Preference number: 6 (lower is better)
Translates to: MTEVRWRFLTVS*APRVLVKSTRA
Trigger: GGCCCGTGTGCTCTTCACCAGCACTCGGGGCGCCAAGGAAACGGTCAAAAACCTCCACCTTACCTCCGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CAA 90 bp TCCCACCACTGGTCAAAGGCTCCGAAGGCCACGTTCTCCACCATCTaGCGGTTGAGGTCTCGCTGCATGATGCTCTTCATCTCCTGGACC +
Preference number: 6 (lower is better)
Translates to: SHHWSKAPKATFSTI*RLRSRCMMLFISWT
Trigger: GGTCCAGGAGATGAAGAGCATCATGCAGCGAGACCTCAACCGCAAGATGGTGGAGAACGTGGCCTTCGGAGCCTTTGACCAGTGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp GCACCTCACTCCCTGTATCTCTGGCCCCAAGGACCATaGTGCTGTTCTCTTCCTCCTCCTCTGTGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: APHSLYLWPQGP*CCSLPPPLCQR
Trigger: CCTCTGACACAGAGGAGGAGGAAGAGAACAGCAGCATGGTCCTTGGGGCCAGAGATACAGGGAGTGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp CTTCTGCCCATCTCCCCCACCTTCCTGATCCATCTTTaGTCATTTACATTTCGCCACAGGCGCTGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: LLPISPTFLIHL*SFTFRHRRCRG
Trigger: CCCCCGGCAGCGCCTGTGGCGAAATGTAAATGAGCAAAGATGGATCAGGAAGGTGGGGGAGATGGGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682768.1
CDS CCA 72 bp CTTGTTCAGGGTCGTCTTCATCTTCCTCAGCAGGAGTaGAGGGACGAGGCCTCTTTTCCTCACTGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: LVQGRLHLPQQE*RDEASFPHWPR
Trigger: CCGAGGCCAGTGAGGAAAAGAGGCCTCGTCCCTCCACTCCTGCTGAGGAAGATGAAGACGACCCTGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp AGGATGAGGACGAGGAGGAGGAGGAGGATGAGGAGCTaGAAGAGCTGCTGCTCTCGGAGTCTGATGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RMRTRRRRRMRS*KSCCSRSLMCC
Trigger: ACAGCACATCAGACTCCGAGAGCAGCAGCTCTTCCAGCTCCTCATCCTCCTCCTCCTCCTCGTCCTCATCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp GCAGCAATGGGTTCCATGGCAAACAGACCCCACTCGTaGATCCGGCTCCGGCCAAATCGGAGCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AAMGSMANRPHS*IRLRPNRSFFF
Trigger: GAAGAAGAAGCTCCGATTTGGCCGGAGCCGGATCCACGAGTGGGGTCTGTTTGCCATGGAACCCATTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp ACGAGGAGGAGGAGGAGGATGAGGAGCTGGAAGAGCTaGTGCTCTCGGAGTCTGATGTGCTGTCATTTTCGC +
Preference number: 6 (lower is better)
Translates to: TRRRRRMRSWKS*CSRSLMCCHFR
Trigger: GCGAAAATGACAGCACATCAGACTCCGAGAGCAGCAGCTCTTCCAGCTCCTCATCCTCCTCCTCCTCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS GCA 72 bp AGCTTCGTCTTCTCTTTATCCTCCTCCTTGGCTTGCTaGTTGGCCGCGTTCTGGAATGGCTTGGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SFVFSLSSSLAC*LAAFWNGLAFS
Trigger: GGAGAAGGCCAAGCCATTCCAGAACGCGGCCAAGCAGCAAGCCAAGGAGGAGGATAAAGAGAAGACGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp CAGCAGGAGTGGAGGGACGAGGCCTCTTTTCCTCACTaGCCTCGGAAATTTCCGATGGCTCTTTCCGCTTTA +
Preference number: 6 (lower is better)
Translates to: QQEWRDEASFPH*PRKFPMALSAL
Trigger: TAAAGCGGAAAGAGCCATCGGAAATTTCCGAGGCCAGTGAGGAAAAGAGGCCTCGTCCCTCCACTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp TGGTCAAAGGCTCCGAAGGCCACGTTCTCCACCATCTaGCGGTTGAGGTCTCGCTGCATGATGCTCTTCATC +
Preference number: 6 (lower is better)
Translates to: WSKAPKATFSTI*RLRSRCMMLFI
Trigger: GATGAAGAGCATCATGCAGCGAGACCTCAACCGCAAGATGGTGGAGAACGTGGCCTTCGGAGCCTTTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp TTGGGAGGACTGAGGTGTGAACTGGCCAAAGGAAGATaGGGTATCTTGTCGGCTGCTGGAGAAGCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: LGGLRCELAKGR*GILSAAGEACV
Trigger: GACACAAGCTTCTCCAGCAGCCGACAAGATACCCCATCTTCCTTTGGCCAGTTCACACCTCAGTCCTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CCA 72 bp CGTCCTCGCCATCCGACACCTCTGTCTCCTTCTTTGTaGTATCCACAGCTTCCTCTCGATCTTCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: RPRHPTPLSPSL*YPQLPLDLHLP
Trigger: AGGAAGATGAAGATCGAGAGGAAGCTGTGGATACCACAAAGAAGGAGACAGAGGTGTCGGATGGCGAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 72 bp CCTCGTCCTCGCCATCCGACACCTCTGTCTCCTTCTTaGTGGTATCCACAGCTTCCTCTCGATCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: PRPRHPTPLSPS*WYPQLPLDLHL
Trigger: AAGATGAAGATCGAGAGGAAGCTGTGGATACCACAAAGAAGGAGACAGAGGTGTCGGATGGCGAGGACGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp AATCGCTTTCCTCGTCCTCGCCATCCGACACCTCTGTCTCCTTCTTaGTGGTATCCACAGCTTCCTCTCGATCTTCATCTTCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: NRFPRPRHPTPLSPS*WYPQLPLDLHLPHL
Trigger: AAGATGAGGAAGATGAAGATCGAGAGGAAGCTGTGGATACCACAAAGAAGGAGACAGAGGTGTCGGATGGCGAGGACGAGGAAAGCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp GATGTGCTGTCATTTTCGCCATCTGAGTCAGCATACAGAGAACATTaGGAAGACGAATCGCTTTCCTCGTCCTCGCCATCCGACACCTCT +
Preference number: 6 (lower is better)
Translates to: DVLSFSPSESAYREH*EDESLSSSSPSDTS
Trigger: AGAGGTGTCGGATGGCGAGGACGAGGAAAGCGATTCGTCTTCCAAATGTTCTCTGTATGCTGACTCAGATGGCGAAAATGACAGCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CCA 72 bp CATTTTCGCCATCTGAGTCAGCATACAGAGAACATTTaGAAGACGAATCGCTTTCCTCGTCCTCGCCATCCG +
Preference number: 6 (lower is better)
Translates to: HFRHLSQHTENI*KTNRFPRPRHP
Trigger: CGGATGGCGAGGACGAGGAAAGCGATTCGTCTTCCAAATGTTCTCTGTATGCTGACTCAGATGGCGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS CAA 90 bp TCACCGTACTTACGGCACATATCCTTCAGGAAGGTCTCCCGCACGTaGTCATTCAGCCTTGCAAAAGTCACTTCCTTCAGTGGAATCTGT +
Preference number: 6 (lower is better)
Translates to: SPYLRHISFRKVSRT*SFSLAKVTSFSGIC
Trigger: ACAGATTCCACTGAAGGAAGTGACTTTTGCAAGGCTGAATGACAACGTGCGGGAGACCTTCCTGAAGGATATGTGCCGTAAGTACGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CCA 72 bp TCTCTGTTTTTGGACCTGACATGGCAACGGGGGTCTTaGAGGTCTTCGACTGGTATATACTTTGAGTCGTTG +
Preference number: 6 (lower is better)
Translates to: SLFLDLTWQRGS*RSSTGIYFESL
Trigger: CAACGACTCAAAGTATATACCAGTCGAAGACCTCCAAGACCCCCGTTGCCATGTCAGGTCCAAAAACAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CAA 72 bp TTACGGCACATATCCTTCAGGAAGGTCTCCCGCACGTaGTCATTCAGCCTTGCAAAAGTCACTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LRHISFRKVSRT*SFSLAKVTSFS
Trigger: ACTGAAGGAAGTGACTTTTGCAAGGCTGAATGACAACGTGCGGGAGACCTTCCTGAAGGATATGTGCCGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS CAA 72 bp TCATTTTCGCCATCTGAGTCAGCATACAGAGAACATTaGGAAGACGAATCGCTTTCCTCGTCCTCGCCATCC +
Preference number: 6 (lower is better)
Translates to: SFSPSESAYREH*EDESLSSSSPS
Trigger: GGATGGCGAGGACGAGGAAAGCGATTCGTCTTCCAAATGTTCTCTGTATGCTGACTCAGATGGCGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1
CDS TCA 72 bp CCCCAGTGGGCACAGTCTGAGGGGTGTAGGAGCCATTaGCAATTAGTTCATAGTATTTCATTCGTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: PQWAQSEGCRSH*QLVHSISFVVV
Trigger: GACAACAACGAATGAAATACTATGAACTAATTGTCAATGGCTCCTACACCCCTCAGACTGTGCCCACTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262519.14
ENST00000682768.1
ENST00000684162.1
CDS GCA 72 bp GTAGCGATTCCAGCTTTCATAATACGCTGGGTAGTTTaGATCAGAACTACGAAACTGAGAGGACGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: VAIPAFIIRWVV*IRTTKLRGRGG
Trigger: TCCTCCTCGTCCTCTCAGTTTCGTAGTTCTGATGCAAACTACCCAGCGTATTATGAAAGCTGGAATCGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262519.14
ENST00000684162.1