RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SET (Homo sapiens)

Ensembl gene IDs: ENSG00000119335

Ensembl transcript IDs: ENST00000372692.8, ENST00000466009.5, ENST00000480217.5

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCCCCAGGTGCCAGCGGCTTAAATCTGCACTGGAGCCGCCCTGCCTaGAAGGGATATTTACATGACAGTGGGACACACACCCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: APGASGLNLHWSRPA*KGYLHDSGTHTPAP
Trigger: GGGGGCCGGGGTGTGTGTCCCACTGTCATGTAAATATCCCTTCCAGGCAGGGCGGCTCCAGTGCAGATTTAAGCCGCTGGCACCTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372692.8
CDS CCA 90 bp CTGAACACTGAGACTGCCCCAGGTGCCAGCGGCTTAAATCTGCACTaGAGCCGCCCTGCCTGGAAGGGATATTTACATGACAGTGGGACA +
Preference number: 5 (lower is better)
Translates to: LNTETAPGASGLNLH*SRPAWKGYLHDSGT
Trigger: TGTCCCACTGTCATGTAAATATCCCTTCCAGGCAGGGCGGCTCCAGTGCAGATTTAAGCCGCTGGCACCTGGGGCAGTCTCAGTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372692.8
CDS CCA 90 bp CACGCCTACAAAGACTGGAAAGTCACGGGGCACCATCCTACACCCTaGCCTTCGCCTTCTCAGAACATGAACCCCTCCAACCCAATTCAG +
Preference number: 5 (lower is better)
Translates to: HAYKDWKVTGHHPTP*PSPSQNMNPSNPIQ
Trigger: CTGAATTGGGTTGGAGGGGTTCATGTTCTGAGAAGGCGAAGGCCAGGGTGTAGGATGGTGCCCCGTGACTTTCCAGTCTTTGTAGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS CCA 90 bp CGACTCTGCTATTACGATGAAGATACCAGGCACGCCTACAAAGACTaGAAAGTCACGGGGCACCATCCTACACCCTGGCCTTCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RLCYYDEDTRHAYKD*KVTGHHPTPWPSPS
Trigger: AGAAGGCGAAGGCCAGGGTGTAGGATGGTGCCCCGTGACTTTCCAGTCTTTGTAGGCGTGCCTGGTATCTTCATCGTAATAGCAGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS TCA 72 bp ACCATCCTACACCCTGGCCTTCGCCTTCTCAGAACATaGACCCCTCCAACCCAATTCAGGCGGGCAGACCTC +
Preference number: 6 (lower is better)
Translates to: TILHPGLRLLRT*TPPTQFRRADL
Trigger: GAGGTCTGCCCGCCTGAATTGGGTTGGAGGGGTTCATGTTCTGAGAAGGCGAAGGCCAGGGTGTAGGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS CCA 72 bp GAGACTGCCCCAGGTGCCAGCGGCTTAAATCTGCACTaGAGCCGCCCTGCCTGGAAGGGATATTTACATGAC +
Preference number: 6 (lower is better)
Translates to: ETAPGASGLNLH*SRPAWKGYLHD
Trigger: GTCATGTAAATATCCCTTCCAGGCAGGGCGGCTCCAGTGCAGATTTAAGCCGCTGGCACCTGGGGCAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372692.8
CDS CAA 72 bp CAGGCGGGCAGACCTCAGATGCGGCCCCACACGACTTaGGAGCACTTACTGGGAGCAACTATGAGATCGGAA +
Preference number: 6 (lower is better)
Translates to: QAGRPQMRPHTT*EHLLGATMRSE
Trigger: TTCCGATCTCATAGTTGCTCCCAGTAAGTGCTCCAAAGTCGTGTGGGGCCGCATCTGAGGTCTGCCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS CCA 72 bp GCCAGCGGCTTAAATCTGCACTGGAGCCGCCCTGCCTaGAAGGGATATTTACATGACAGTGGGACACACACC +
Preference number: 6 (lower is better)
Translates to: ASGLNLHWSRPA*KGYLHDSGTHT
Trigger: GGTGTGTGTCCCACTGTCATGTAAATATCCCTTCCAGGCAGGGCGGCTCCAGTGCAGATTTAAGCCGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372692.8
CDS CAA 90 bp AACCCAATTCAGGCGGGCAGACCTCAGATGCGGCCCCACACGACTTaGGAGCACTTACTGGGAGCAACTATGAGATCGGAAAGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: NPIQAGRPQMRPHTT*EHLLGATMRSESSE
Trigger: CTCACTGCTTTCCGATCTCATAGTTGCTCCCAGTAAGTGCTCCAAAGTCGTGTGGGGCCGCATCTGAGGTCTGCCCGCCTGAATTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS CCA 72 bp AAAGACTGGAAAGTCACGGGGCACCATCCTACACCCTaGCCTTCGCCTTCTCAGAACATGAACCCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: KDWKVTGHHPTP*PSPSQNMNPSN
Trigger: GTTGGAGGGGTTCATGTTCTGAGAAGGCGAAGGCCAGGGTGTAGGATGGTGCCCCGTGACTTTCCAGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS TCA 72 bp CCCACACGACTTTGGAGCACTTACTGGGAGCAACTATaGGATCGGAAAGCAGTGAGGCACAGAAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PTRLWSTYWEQL*DRKAVRHRRER
Trigger: CCTCTCCCTTCTGTGCCTCACTGCTTTCCGATCTCATAGTTGCTCCCAGTAAGTGCTCCAAAGTCGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS CCA 72 bp TATTACGATGAAGATACCAGGCACGCCTACAAAGACTaGAAAGTCACGGGGCACCATCCTACACCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: YYDEDTRHAYKD*KVTGHHPTPWP
Trigger: AGGCCAGGGTGTAGGATGGTGCCCCGTGACTTTCCAGTCTTTGTAGGCGTGCCTGGTATCTTCATCGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466009.5
CDS TCA 72 bp TTGCTGTTCTTTTTCCCCTACAAAGCTAAGTGGGTGTaGAAGGGCCAGATCGCGCGGTTCATTTCCGGTAAC +
Preference number: 6 (lower is better)
Translates to: LLFFFPYKAKWV*KGQIARFISGN
Trigger: GTTACCGGAAATGAACCGCGCGATCTGGCCCTTTCACACCCACTTAGCTTTGTAGGGGAAAAAGAACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480217.5
CDS TCA 72 bp TTCTTTCATAGAAAGTTGACGACTCTGCTATTACGATaGAGATACCAGGCACGCCTACAAAGACTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: FFHRKLTTLLLR*RYQARLQRLES
Trigger: ACTTTCCAGTCTTTGTAGGCGTGCCTGGTATCTTCATCGTAATAGCAGAGTCGTCAACTTTCTATGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466009.5