RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SESN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000149212

Ensembl transcript IDs: ENST00000278499.6, ENST00000416495.6, ENST00000536441.7, ENST00000537480.1, ENST00000542176.1, ENST00000634898.1

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGTGACTTATCAGCGGGTGGCTGGTGATGTTTGGTTTGGATTGTaGAAGCTGCTTAGACCAAGATGGGCTGAGGGAAGGGGAGGAGAG +
Preference number: 1 (lower is better)
Translates to: LVTYQRVAGDVWFGL*KLLRPRWAEGRGGE
Trigger: CTCTCCTCCCCTTCCCTCAGCCCATCTTGGTCTAAGCAGCTTTCACAATCCAAACCAAACATCACCAGCCACCCGCTGATAAGTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR GCA 90 bp CTTATCAGCGGGTGGCTGGTGATGTTTGGTTTGGATTGTGAAAGCTaGTTAGACCAAGATGGGCTGAGGGAAGGGGAGGAGAGTGAGCAT +
Preference number: 1 (lower is better)
Translates to: LISGWLVMFGLDCES*LDQDGLREGEESEH
Trigger: ATGCTCACTCTCCTCCCCTTCCCTCAGCCCATCTTGGTCTAAGCAGCTTTCACAATCCAAACCAAACATCACCAGCCACCCGCTGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 90 bp CAGTGCCTGACAAATAATCTCCTGGGGACACAAATATGTGTCCAGTaGGCAGCTTGGTTCAACAGCGCATGCTTTTCCTCCACCAGATTT +
Preference number: 1 (lower is better)
Translates to: QCLTNNLLGTQICVQ*AAWFNSACFSSTRF
Trigger: AAATCTGGTGGAGGAAAAGCATGCGCTGTTGAACCAAGCTGCTCACTGGACACATATTTGTGTCCCCAGGAGATTATTTGTCAGGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR GCA 90 bp ATGTTCCTCATATTCTTTGAAAACTCTTCCTTCCTCATAGGGCTCTaGCTTGACATATACCTCTACCTCTCTTATCCATTTCACCCCAGC +
Preference number: 1 (lower is better)
Translates to: MFLIFFENSSFLIGL*LDIYLYLSYPFHPS
Trigger: GCTGGGGTGAAATGGATAAGAGAGGTAGAGGTATATGTCAAGGCAGAGCCCTATGAGGAAGGAAGAGTTTTCAAAGAATATGAGGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 90 bp GTCTCAATGAATGGAGAAAAAGTAACTCAGGAAAGTAAATGCTGGTaGCTTATCAGCGGGTGGCTGGTGATGTTTGGTTTGGATTGTGAA +
Preference number: 1 (lower is better)
Translates to: VSMNGEKVTQESKCW*LISGWLVMFGLDCE
Trigger: TTCACAATCCAAACCAAACATCACCAGCCACCCGCTGATAAGTCACCAGCATTTACTTTCCTGAGTTACTTTTTCTCCATTCATTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR GCA 90 bp GAGACTGTGTATGTGTATGTGCCTATACTAGTAGCACTGAGAAGATaGCAAACTGGCTGTGGTTTGCTTTCTATGTCTCTTATTTTGGGT +
Preference number: 1 (lower is better)
Translates to: ETVYVYVPILVALRR*QTGCGLLSMSLILG
Trigger: ACCCAAAATAAGAGACATAGAAAGCAAACCACAGCCAGTTTGGCATCTTCTCAGTGCTACTAGTATAGGCACATACACATACACAGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CCA 90 bp AGAAATGTGTTTCAAGGCCCAAACACCACCAATAAAACAAATGTCTaGAACACCACCCTATTTGCATACCAGAAATTTCCCATTCCACTG +
Preference number: 1 (lower is better)
Translates to: RNVFQGPNTTNKTNV*NTTLFAYQKFPIPL
Trigger: CAGTGGAATGGGAAATTTCTGGTATGCAAATAGGGTGGTGTTCCAGACATTTGTTTTATTGGTGGTGTTTGGGCCTTGAAACACATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CCA 90 bp GTATGTGTATGTGCCTATACTAGTAGCACTGAGAAGATGCCAAACTaGCTGTGGTTTGCTTTCTATGTCTCTTATTTTGGGTTGAAAAGA +
Preference number: 1 (lower is better)
Translates to: VCVCAYTSSTEKMPN*LWFAFYVSYFGLKR
Trigger: TCTTTTCAACCCAAAATAAGAGACATAGAAAGCAAACCACAGCCAGTTTGGCATCTTCTCAGTGCTACTAGTATAGGCACATACACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CCA 90 bp GTATGTGCCTATACTAGTAGCACTGAGAAGATGCCAAACTGGCTGTaGTTTGCTTTCTATGTCTCTTATTTTGGGTTGAAAAGAGTAAAT +
Preference number: 1 (lower is better)
Translates to: VCAYTSSTEKMPNWL*FAFYVSYFGLKRVN
Trigger: ATTTACTCTTTTCAACCCAAAATAAGAGACATAGAAAGCAAACCACAGCCAGTTTGGCATCTTCTCAGTGCTACTAGTATAGGCACATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCAGAAAAGGGTGGACTaGATGCAGACAGGACCTCCC +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHQKRVD*MQTGPP
Trigger: GGGAGGTCCTGTCTGCATTCAGTCCACCCTTTTCTG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTCAGCGGGTGGCTGGTaGTGTTTGGTTTGGATTGTG +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWSAGGW*CLVWIV
Trigger: CACAATCCAAACCAAACATCACCAGCCACCCGCTGA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGCAGGCAGAAAAGGGTaGACTGAATGCAGACAGGAC +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHAGRKG*TECRQD
Trigger: GTCCTGTCTGCATTCAGTCCACCCTTTTCTGCCTGC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCATAGGGCTCTGCCTTaGCATATACCTCTACCTCTC +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHHRALP*HIPLPL
Trigger: GAGAGGTAGAGGTATATGTCAAGGCAGAGCCCTATG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGAAAGTAAATGCTGGTaGCTTATCAGCGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWESKCW*LISGWL
Trigger: CAGCCACCCGCTGATAAGTCACCAGCATTTACTTTC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAAGGGTGGACTGAATaGAGACAGGACCTCCCACAT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKGWTE*RQDLPH
Trigger: ATGTGGGAGGTCCTGTCTGCATTCAGTCCACCCTTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACCACATGGAAAACACTaGAGTTGCCCTGTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQPHGKH*SCPVRV
Trigger: AACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416495.6
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCAAATATGTGTCCAGTaGGCAGCTTGGTTCAACAGC +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWQICVQ*AAWFNS
Trigger: GCTGTTGAACCAAGCTGCTCACTGGACACATATTTG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCAAGGAGATTTTTCTaGGGAAGGGAATGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWPRRFF*GRECFG
Trigger: GCCAAAGCATTCCCTTCCCCAGAAAAATCTCCTTGG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CAA 90 bp GTTATTTTCAGGCTTAAAGGAGCTAATCCAAGTAGCAAGGCCATGTaGCAAGTGGACCTGACAGGGTTCTTTATAACCTTGCTGAGACTG +
Preference number: 2 (lower is better)
Translates to: VIFRLKGANPSSKAM*QVDLTGFFITLLRL
Trigger: CAGTCTCAGCAAGGTTATAAAGAACCCTGTCAGGTCCACTTGCAACATGGCCTTGCTACTTGGATTAGCTCCTTTAAGCCTGAAAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCAGCACTGTGAGCACTaGTTATTTAAGGTGACTGAG +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWQHCEH*LFKVTE
Trigger: CTCAGTCACCTTAAATAATCAGTGCTCACAGTGCTG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAGGACACTTTTGCAGTaGTATGACAGGGGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHRTLLQ*YDRGKV
Trigger: AACTTTCCCCCTGTCATATCACTGCAAAAGTGTCCT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTTAGGTGTACGGTGCTaGAGGCAGCCACACTCTCAG +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSILGVRC*RQPHSQ
Trigger: CTGAGAGTGTGGCTGCCTTCAGCACCGTACACCTAA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTGGTTCAACAGCGCATaGTTTTCCTCCACCAGATTT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWWFNSA*FSSTRF
Trigger: AAATCTGGTGGAGGAAAAGCATGCGCTGTTGAACCA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGGCTATTTTGTGGTATaGCCTGCACGATCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHGYFVV*PARSQR
Trigger: TCTTTGAGATCGTGCAGGGCATACCACAAAATAGCC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTATGTGCCAACTAAATaGACTGTAAGCAGCACTGTG +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWYVPTK*TVSSTV
Trigger: CACAGTGCTGCTTACAGTTCATTTAGTTGGCACATA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTTTCAGCCTGCTGTTaGATTGTGCTACTAAGCAAA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLSACC*IVLLSK
Trigger: TTTGCTTAGTAGCACAATTCAACAGCAGGCTGAAAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAACACAGTTTACGTTaGCGGCCACCTAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKHSLR*RPPRID
Trigger: ATCTATTCTAGGTGGCCGTCAACGTAAACTGTGTTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCTGAACAACAGTGAGTaGATCCATGAAAAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWLNNSE*IHEKVG
Trigger: TCCAACCTTTTCATGGATTCACTCACTGTTGTTCAG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTCATTCCTGAGCCCTaGAAGGCATTTATTGGATAC +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHFIPEP*KAFIGY
Trigger: GTATCCAATAAATGCCTTTCAGGGCTCAGGAATGAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTTCTGGGGAAGGGAATaGTTTGGCATTATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWFWGRE*FGIMKG
Trigger: TCCTTTCATAATGCCAAAGCATTCCCTTCCCCAGAA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGCAGTTGTGTCCTACTaGATAGTTGTAAGCATCTCT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHAVVSY*IVVSIS
Trigger: AGAGATGCTTACAACTATCCAGTAGGACACAACTGC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACTTTTGCAGTGATATaGCAGGGGGAAAGTTTAGTT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTFAVI*QGESLV
Trigger: AACTAAACTTTCCCCCTGTCATATCACTGCAAAAGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTGGAAGTTGTATTACTaGACAACAGTGAGTGAATCC +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHWKLYY*TTVSES
Trigger: GGATTCACTCACTGTTGTTCAGTAATACAACTTCCA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAATTTCCCATTCCACTaGAGGGTTACAAGTCATTCT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWNFPFH*RVTSHS
Trigger: AGAATGACTTGTAACCCTTCAGTGGAATGGGAAATT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTCCAACTACAAACAATaGAAAGTAGTGCTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWSNYKQ*KVVLLS
Trigger: ACTGAGGAGCACTACTTTGCATTGTTTGTAGTTGGA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAATGCTGTGCATGCTaGGTATTAGTAGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKCCAC*VLVGAL
Trigger: TAAAGCACCTACTAATACGCAGCATGCACAGCATTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGATTCACAACCTGAAATaGTGTGCATGCTGCGTATTA +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWIHNLK*CACCVL
Trigger: TAATACGCAGCATGCACAGCATTTCAGGTTGTGAAT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGAACACCACCCTATTTaGATACCAGAAATTTCCCAT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWEHHPI*IPEISH
Trigger: ATGGGAAATTTCTGGTATGCAAATAGGGTGGTGTTC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGGGAAGGGAATGCTTTaGCATTATGAAAGGAACATT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHGKGML*HYERNI
Trigger: AATGTTCCTTTCATAATGCCAAAGCATTCCCTTCCC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGTTCTAGGTCTCACCTaGGCAGATTCTAGGTCTGCT +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIVLGLT*ADSRSA
Trigger: AGCAGACCTAGAATCTGCCCAGGTGAGACCTAGAAC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTCAAGTGCACCTAGCTaGAGAGAAGAACTATTACAT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWSSAPS*REELLH
Trigger: ATGTAATAGTTCTTCTCTCCAGCTAGGTGCACTTGA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTACTTTCAAATGGGATaGTTCATCAGGTCAGACAAC +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHYFQMG*FIRSDN
Trigger: GTTGTCTGACCTGATGAACCATCCCATTTGAAAGTA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGTCTTTACACATGTATaGCATTTTCCTTGGGTGATA +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWVFTHV*HFPWVI
Trigger: TATCACCCAAGGAAAATGTCATACATGTGTAAAGAC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGAGGTCACTCTTTGCTaGATTCCAATATCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHEVTLC*IPISEK
Trigger: TTTTTCAGATATTGGAATTCAGCAAAGAGTGACCTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACTGATTATTTAAGGTaGCTGAGGATTACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTDYLR*LRITVS
Trigger: ACTGACAGTAATCCTCAGTCACCTTAAATAATCAGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAGTTTGGCACAATGTaGGCGCAAGGTGTAGATCAG +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKFGTM*AQGVDQ
Trigger: CTGATCTACACCTTGCGCTCACATTGTGCCAAACTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAAAGACTATTTAATTTaGTTCTCAGTCTCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWKDYLI*FSVSRG
Trigger: CCCTCTGGAGACTGAGAATCAAATTAAATAGTCTTT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGACACAATTTACACTTaGTACTGCATTAACATCTGG +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHDTIYT*YCINIW
Trigger: CCAGATGTTAATGCAGTATCAAGTGTAAATTGTGTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTTAAGAGGTTAACTTaGGGGGTGCAAGAAAATAGA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHFKRLT*GVQENR
Trigger: TCTATTTTCTTGCACCCCTCAAGTTAACCTCTTAAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCAGAGAGATTCTCTCTaGTATTCTTTCGGTAGAAAT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWQRDSL*YSFGRN
Trigger: ATTTCTACCGAAAGAATATCAGAGAGAATCTCTCTG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACACTTGGGGAGCCAGTTaGAAATGTGTAAAGATATTA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHTWGAS*KCVKIL
Trigger: TAATATCTTTACACATTTTCAACTGGCTCCCCAAGT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGATTCACATTCACATGTaGTTTTCTCACGTACACTTG +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWIHIHM*FSHVHL
Trigger: CAAGTGTACGTGAGAAAAGCACATGTGAATGTGAAT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGTAGCACTGAGAAGATaGCAAACTGGCTGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIVALRR*QTGCGL
Trigger: CAAACCACAGCCAGTTTGGCATCTTCTCAGTGCTAC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTGCAAAGAAAATTTTTaGTCAGTCTTGTGTGGGTAC +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWCKENF*SVLCGY
Trigger: GTACCCACACAAGACTGACCAAAAATTTTCTTTGCA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGGTCTAAAGCTCATATaGTGTTCTGTGAGAATTTCT +
Preference number: 2 (lower is better)
Translates to: PAKFRKRKSLNITKETPWGLKLI*CSVRIS
Trigger: AGAAATTCTCACAGAACACCATATGAGCTTTAGACC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACACTCCCATAGTCAGGTaGGTTAAAGAACAGATTATT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHTPIVR*VKEQII
Trigger: AATAATCTGTTCTTTAACCCACCTGACTATGGGAGT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTATTTCCTCTTCCTTCTaGATATACCCGAAGTGCGGC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIISSSF*IYPKCG
Trigger: GCCGCACTTCGGGTATATCCAGAAGGAAGAGGAAAT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCTGCGTATTAGTAGGTaGTTTAGCACCTGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSILRISR*FSTCRS
Trigger: ACTTCTGCAGGTGCTAAAGCACCTACTAATACGCAG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCTGAAATGCTGTGCATaGTGCGTATTAGTAGGTGCT +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSILKCCA*CVLVGA
Trigger: AGCACCTACTAATACGCAGCATGCACAGCATTTCAG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACATTAAAGTTTTAGAATaGCCAGAGAGGTCACTCTTT +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHIKVLE*PERSLF
Trigger: AAAGAGTGACCTCTCTGGCCATTCTAAAACTTTAAT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCATAGTCTCAATGAATaGAGAAAAAGTAACTCAGGA +
Preference number: 2 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHHSLNE*RKSNSG
Trigger: TCCTGAGTTACTTTTTCTCCATTCATTGAGACTATG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCTAAAGGCTATTTTGTaGTATGCCCTGCACGATCTC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSILKAIL*YALHDL
Trigger: GAGATCGTGCAGGGCATACCACAAAATAGCCTTTAG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CAA 90 bp AATCATATGGGCTTCTGTGATCCCATAGGACCATCTAAATACCCTTaGCCATATGTCATTCTATTAGAAATGTGTTTCAAGGCCCAAACA +
Preference number: 2 (lower is better)
Translates to: NHMGFCDPIGPSKYP*PYVILLEMCFKAQT
Trigger: TGTTTGGGCCTTGAAACACATTTCTAATAGAATGACATATGGCAAAGGGTATTTAGATGGTCCTATGGGATCACAGAAGCCCATATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTTTTGTGGTATGCCCTaGACGATCTCAAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIFCGMP*TISKIS
Trigger: GGAAATCTTTGAGATCGTGCAGGGCATACCACAAAA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTTGGTCAGTCTTGTGTaGGTACAGGTTTATATGTGC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSILVSLV*VQVYMC
Trigger: GCACATATAAACCTGTACCCACACAAGACTGACCAA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCCTTGTTTCCCCTTTTaGTCTAAAGCTCATATGGTG +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIPCFPF*SKAHMV
Trigger: CACCATATGAGCTTTAGACCAAAAGGGGAAACAAGG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGAGAAGATGCCAAACTaGCTGTGGTTTGCTTTCTAT +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIEKMPN*LWFAFY
Trigger: ATAGAAAGCAAACCACAGCCAGTTTGGCATCTTCTC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTACCAATGCAAAAATGTaGCTTTTTGGCCGCTTATTC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSITNAKM*LFGRLF
Trigger: GAATAAGCGGCCAAAAAGTCACATTTTTGCATTGGT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTCATATGGTGTTCTGTaGGAATTTCTCCTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSISYGVL*EFLLLF
Trigger: GAAAAGGAGGAGAAATTCTCACAGAACACCATATGA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAGGTTGAGTTGTTCATaGATGAGATGGAAAACAACC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIRLSCS*MRWKTT
Trigger: GGTTGTTTTCCATCTCATTCATGAACAACTCAACCT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTATGTCAATTCATTCCTaGGCCCTGAAAGGCATTTAT +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIMSIHS*ALKGIY
Trigger: ATAAATGCCTTTCAGGGCTCAGGAATGAATTGACAT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAGAAGTTGGCAATCTaGTTTCATGTGCAATTCAGC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKKLAI*FHVQFS
Trigger: GCTGAATTGCACATGAAATCAGATTGCCAACTTCTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAAGATCACGTCATCTaGCTTACATTAGTCCAGTCA +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKDHVI*LTLVQS
Trigger: TGACTGGACTAATGTAAGGCAGATGACGTGATCTTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGGATTTAGAAGGAGTTaGGATGAATCCATAGTCTCA +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIGFRRS*DESIVS
Trigger: TGAGACTATGGATTCATCCCAACTCCTTCTAAATCC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAATTCATACTGGGACTaGGACAATGTACTTAGTTCA +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSINSYWD*DNVLSS
Trigger: TGAACTAAGTACATTGTCTCAGTCCCAGTATGAATT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTTTCTCACGTACACTTaGACATTTAAGTTTGGCACA +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIFLTYT*TFKFGT
Trigger: TGTGCCAAACTTAAATGTGCAAGTGTACGTGAGAAA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTTTCAAACAGGATCCTaGAATCCAAAAATGCAGAAC +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIFQTGS*NPKMQN
Trigger: GTTCTGCATTTTTGGATTCCAGGATCCTGTTTGAAA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCAAAATATAGCTGGATaGTTGAGGGATTTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIQNIAG*LRDLEG
Trigger: TCCTTCTAAATCCCTCAACCATCCAGCTATATTTTG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp TATCAGCGGGTGGCTGGTGATGTTTGGTTTGGATTGTaGAAGCTGCTTAGACCAAGATGGGCTGAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: YQRVAGDVWFGL*KLLRPRWAEGR
Trigger: CCTTCCCTCAGCCCATCTTGGTCTAAGCAGCTTTCACAATCCAAACCAAACATCACCAGCCACCCGCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTGTCCAGTGAGCAGCTaGGTTCAACAGCGCATGCTT +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHCPVSS*VQQRML
Trigger: AAGCATGCGCTGTTGAACCAAGCTGCTCACTGGACA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp ACAAATAATCTCCTGGGGACACAAATATGTGTCCAGTaGGCAGCTTGGTTCAACAGCGCATGCTTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: TNNLLGTQICVQ*AAWFNSACFSS
Trigger: GGAGGAAAAGCATGCGCTGTTGAACCAAGCTGCTCACTGGACACATATTTGTGTCCCCAGGAGATTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCTTCCTTATCAGACTaGGGGAGCCAGTTGAAAATG +
Preference number: 3 (lower is better)
Translates to: PAKFRKRKSLNITKETPWPSLSD*GSQLKM
Trigger: CATTTTCAACTGGCTCCCCAAGTCTGATAAGGAAGG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAATGGAAAACACTGAAGTaGCCCTGTCAGGGTTCTAAG +
Preference number: 3 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQWKTLK*PCQGSK
Trigger: CTTAGAACCCTGACAGGGCAACTTCAGTGTTTTCCA...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416495.6
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTTGCACATTTAAGTTaGGCACAATGTGAGCGCAAG +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLAHLS*AQCERK
Trigger: CTTGCGCTCACATTGTGCCAAACTTAAATGTGCAAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGTTCTAAAGGCTATTTaGTGGTATGCCCTGCACGAT +
Preference number: 3 (lower is better)
Translates to: PAKFRKRKSLNITKETPWVLKAI*WYALHD
Trigger: ATCGTGCAGGGCATACCACAAAATAGCCTTTAGAAC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp ATGGGAAATATTTTCTCTAGATTAGGTGTACGGTGCTaGAGGCAGCCACACTCTCAGCACTATGTTCCTCAT +
Preference number: 3 (lower is better)
Translates to: MGNIFSRLGVRC*RQPHSQHYVPH
Trigger: ATGAGGAACATAGTGCTGAGAGTGTGGCTGCCTTCAGCACCGTACACCTAATCTAGAGAAAATATTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CCA 72 bp GTGTCTAGGGCAAAGGTTAGCCAAAATATAGCTGGATaGTTGAGGGATTTAGAAGGAGTTGGGATGAATCCA +
Preference number: 3 (lower is better)
Translates to: VSRAKVSQNIAG*LRDLEGVGMNP
Trigger: TGGATTCATCCCAACTCCTTCTAAATCCCTCAACCATCCAGCTATATTTTGGCTAACCTTTGCCCTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACACTTTCAGCCTGCTGTaGAATTGTGCTACTAAGCAA +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHTFSLL*NCATKQ
Trigger: TTGCTTAGTAGCACAATTCAACAGCAGGCTGAAAGT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTGGTGATGTTTGGTTaGGATTGTGAAAGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLVMFG*DCESCL
Trigger: TAAGCAGCTTTCACAATCCAAACCAAACATCACCAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp AATGGAGAAAAAGTAACTCAGGAAAGTAAATGCTGGTaGCTTATCAGCGGGTGGCTGGTGATGTTTGGTTTG +
Preference number: 3 (lower is better)
Translates to: NGEKVTQESKCW*LISGWLVMFGL
Trigger: CAAACCAAACATCACCAGCCACCCGCTGATAAGTCACCAGCATTTACTTTCCTGAGTTACTTTTTCTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR GCA 72 bp ACCAGTTGTCCAAGGAGATTTTTCTGGGGAAGGGAATaGTTTGGCATTATGAAAGGAACATTGTTCAATCCC +
Preference number: 3 (lower is better)
Translates to: TSCPRRFFWGRE*FGIMKGTLFNP
Trigger: GGGATTGAACAATGTTCCTTTCATAATGCCAAAGCATTCCCTTCCCCAGAAAAATCTCCTTGGACAACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAGCAACCCAATATATaGTACCAGAGGAGGATGATA +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKQPNI*YQRRMI
Trigger: TATCATCCTCCTCTGGTACAATATATTGGGTTGCTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAATATAGCTGGATGGTaGAGGGATTTAGAAGGAGTT +
Preference number: 3 (lower is better)
Translates to: PAKFRKRKSLNITKETPWNIAGW*RDLEGV
Trigger: AACTCCTTCTAAATCCCTCAACCATCCAGCTATATT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCCTGAAAGGCATTTATaGGATACTACTATCAGGTTG +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHPERHL*DTTIRL
Trigger: CAACCTGATAGTAGTATCCAATAAATGCCTTTCAGG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGACTTGGGGAGCCAGTaGAAAATGTGTAAAGATATT +
Preference number: 3 (lower is better)
Translates to: PAKFRKRKSLNITKETPWDLGSQ*KMCKDI
Trigger: AATATCTTTACACATTTTCAACTGGCTCCCCAAGTC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAATTTTTGGTCAGTCTaGTGTGGGTACAGGTTTATA +
Preference number: 3 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHNFWSV*CGYRFI
Trigger: TATAAACCTGTACCCACACAAGACTGACCAAAAATT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTACTATCAGGTTGAGTaGTTCATGAATGAGATGGAA +
Preference number: 3 (lower is better)
Translates to: PAKFRKRKSLNITKETPWYYQVE*FMNEME
Trigger: TTCCATCTCATTCATGAACAACTCAACCTGATAGTA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGGAACACCACCCTATTaGCATACCAGAAATTTCCCA +
Preference number: 3 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIGTPPY*HTRNFP
Trigger: TGGGAAATTTCTGGTATGCAAATAGGGTGGTGTTCC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp ACTGTAAGCAGCACTGTGAGCACTGATTATTTAAGGTaGCTGAGGATTACTGTCAGTGATAGGATTGTGTTA +
Preference number: 3 (lower is better)
Translates to: TVSSTVSTDYLR*LRITVSDRIVL
Trigger: TAACACAATCCTATCACTGACAGTAATCCTCAGTCACCTTAAATAATCAGTGCTCACAGTGCTGCTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR GCA 72 bp AAATTGGGTATCTGTTCTAAAGGCTATTTTGTGGTATaGCCTGCACGATCTCAAAGATTTCCACAAGCATTC +
Preference number: 3 (lower is better)
Translates to: KLGICSKGYFVV*PARSQRFPQAF
Trigger: GAATGCTTGTGGAAATCTTTGAGATCGTGCAGGGCATACCACAAAATAGCCTTTAGAACAGATACCCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGGGTTCTTTATAACCTaGCTGAGACTGTGTATGTGT +
Preference number: 3 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIGFFIT*LRLCMC
Trigger: ACACATACACAGTCTCAGCAAGGTTATAAAGAACCC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp TCTTGTGTGGGTACAGGTTTATATGTGCCAACTAAATaGACTGTAAGCAGCACTGTGAGCACTGATTATTTA +
Preference number: 3 (lower is better)
Translates to: SCVGTGLYVPTK*TVSSTVSTDYL
Trigger: TAAATAATCAGTGCTCACAGTGCTGCTTACAGTTCATTTAGTTGGCACATATAAACCTGTACCCACACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp CTCCAGAGGGATATAATAGGGAAACACAGTTTACGTTaGCGGCCACCTAGAATAGATTCTGATTACATAAAT +
Preference number: 3 (lower is better)
Translates to: LQRDIIGKHSLR*RPPRIDSDYIN
Trigger: ATTTATGTAATCAGAATCTATTCTAGGTGGCCGTCAACGTAAACTGTGTTTCCCTATTATATCCCTCTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR GCA 72 bp ATATTCTTTGAAAACTCTTCCTTCCTCATAGGGCTCTaGCTTGACATATACCTCTACCTCTCTTATCCATTT +
Preference number: 3 (lower is better)
Translates to: IFFENSSFLIGL*LDIYLYLSYPF
Trigger: AAATGGATAAGAGAGGTAGAGGTATATGTCAAGGCAGAGCCCTATGAGGAAGGAAGAGTTTTCAAAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CCA 72 bp AAAAAGTGTTTAAAAAGCAGTGCAGTTGTGTCCTACTaGATAGTTGTAAGCATCTCTTTAGGCACTTCACTG +
Preference number: 3 (lower is better)
Translates to: KKCLKSSAVVSY*IVVSISLGTSL
Trigger: CAGTGAAGTGCCTAAAGAGATGCTTACAACTATCCAGTAGGACACAACTGCACTGCTTTTTAAACACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGTGCAAAGAAAATTTTaGGTCAGTCTTGTGTGGGTA +
Preference number: 3 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIVQRKF*VSLVWV
Trigger: TACCCACACAAGACTGACCAAAAATTTTCTTTGCAC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTACGTTTTTAAACCAGTaGTCCAAGGAGATTTTTCTG +
Preference number: 3 (lower is better)
Translates to: PPFDTETCVNPKLHQLSITFLNQ*SKEIFL
Trigger: CAGAAAAATCTCCTTGGACAACTGGTTTAAAAACGT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAATGACATCCTCAACTaGAAAGTTGTGAAGTTAGGT +
Preference number: 3 (lower is better)
Translates to: PPFDTETCVNPKLHQLSINDILN*KVVKLG
Trigger: ACCTAACTTCACAACTTTCAAGTTGAGGATGTCATT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR TCA 72 bp AAGGCGCTGAAGTTAAGCATTAATACGCCAGATTCATaGTTTATGATCAGTATCCAAAACTCCAACTACAAA +
Preference number: 3 (lower is better)
Translates to: KALKLSINTPDS*FMISIQNSNYK
Trigger: TTTGTAGTTGGAGTTTTGGATACTGATCATAAATCATGAATCTGGCGTATTAATGCTTAACTTCAGCGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTGTCACTGCGGCCACTaGAGGGCCGGTCCGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWCHCGH*RAGPSP
Trigger: GGGGGACGGACCGGCCCTGCAGTGGCCGCAGTGACA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCCGGTTCATCGTGGCTaGGGGCGCCGAGGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHPVHRG*GRRGES
Trigger: GCTCTCGCCTCGGCGCCCGCAGCCACGATGAACCGG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACCGGTTCATCGTGGCTaGGGGCGCCGAGGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQPVHRG*GRRGES
Trigger: GCTCTCGCCTCGGCGCCCGCAGCCACGATGAACCGG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTCGCCCCGGTTCATCGTaGCTGCGGGCGCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSRPGSS*LRAPRR
Trigger: TCGCCTCGGCGCCCGCAGCCACGATGAACCGGGGCG...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTACAGAGCAGGTAGTTaGCGGCGGCCGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHYRAGS*RRPTGC
Trigger: GCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGGAGAGGCGACTGCCTaGAAGCTAGCGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWGEATA*KLAALP
Trigger: TGGCAGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTGTCACTGCGGCCACTaGAGGGCCGGTCCGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSCHCGH*RAGPSP
Trigger: GGGGGACGGACCGGCCCTGCAGTGGCCGCAGTGACA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCGCCCCGGTTCATCGTaGCTGCGGGCGCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIRPGSS*LRAPRR
Trigger: TCGCCTCGGCGCCCGCAGCCACGATGAACCGGGGCG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAGGAGAGGCGACTGCCTaGAAGCTAGCGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQGEATA*KLAALP
Trigger: TGGCAGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCC...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGGGAGGAGAGGCGACTaGCTGAAAGCTAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWGRRGD*LKASGT
Trigger: AGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCCTCCC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTACAGAGCAGGTAGTTaGCGGCGGCCGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSYRAGS*RRPTGC
Trigger: GCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTAGGTGTACGGTGCTaGAGGCAGCCACACTCTCAG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLGVRC*RQPHSQ
Trigger: CTGAGAGTGTGGCTGCCTTCAGCACCGTACACCTAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCAGAAAAGGGTGGACTaGATGCAGACAGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWQKRVD*MQTGPP
Trigger: GGGAGGTCCTGTCTGCATTCAGTCCACCCTTTTCTG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTCAGCGGGTGGCTGGTaGTGTTTGGTTTGGATTGTG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHSAGGW*CLVWIV
Trigger: CACAATCCAAACCAAACATCACCAGCCACCCGCTGA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTGGGAGGAGAGGCGACTaGCTGAAAGCTAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSGRRGD*LKASGT
Trigger: AGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCCTCCC...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGCACTTTCCGGCAGTTaGTACAGAGCAGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHALSGS*YRAGSW
Trigger: CCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGAAAGTAAATGCTGGTaGCTTATCAGCGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHESKCW*LISGWL
Trigger: CAGCCACCCGCTGATAAGTCACCAGCATTTACTTTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGAAGGGGACCATCCATaGGCAACATGTAAAACTGGC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHEGDHP*ATCKTG
Trigger: GCCAGTTTTACATGTTGCGCATGGATGGTCCCCTTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCGGAATGTTGGCAAATaGTCTTCTCCTCGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHRNVGK*SSPRLA
Trigger: TGCCAGACGAGGAGAAGAGCATTTGCCAACATTCCG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTGAGCTCGGAATGTTaGCAAATGCTCTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLSSEC*QMLFSS
Trigger: CGAGGAGAAGAGCATTTGCCAACATTCCGAGCTCAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAGCACTTTCCGGCAGTTaGTACAGAGCAGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQALSGS*YRAGSW
Trigger: CCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGC...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGTTCTAGGTCTCACCTaGGCAGATTCTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWVLGLT*ADSRSA
Trigger: AGCAGACCTAGAATCTGCCCAGGTGAGACCTAGAAC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCAAATATGTGTCCAGTaGGCAGCTTGGTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHQICVQ*AAWFNS
Trigger: GCTGTTGAACCAAGCTGCTCACTGGACACATATTTG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAAGTTTGGCACAATGTaGGCGCAAGGTGTAGATCAG +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWKFGTM*AQGVDQ
Trigger: CTGATCTACACCTTGCGCTCACATTGTGCCAAACTT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGTAGCACTGAGAAGATaGCAAACTGGCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHVALRR*QTGCGL
Trigger: CAAACCACAGCCAGTTTGGCATCTTCTCAGTGCTAC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGCTCTTCTCCTCGTCTaGCAAAGTCTTCATACCCAA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWALLLV*QSLHTQ
Trigger: TTGGGTATGAAGACTTTGCCAGACGAGGAGAAGAGC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
3UTR CAA 72 bp AGGCTTAAAGGAGCTAATCCAAGTAGCAAGGCCATGTaGCAAGTGGACCTGACAGGGTTCTTTATAACCTTG +
Preference number: 4 (lower is better)
Translates to: RLKGANPSSKAM*QVDLTGFFITL
Trigger: CAAGGTTATAAAGAACCCTGTCAGGTCCACTTGCAACATGGCCTTGCTACTTGGATTAGCTCCTTTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAGTGCTCATTTCTTCTTaGGACGCCTCTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQVLISS*DASSSS
Trigger: GGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCAC...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGACATGAACTTTTTCTaGGTGTTTGAACTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHDMNFF*VFELPP
Trigger: TGGCGGCAGTTCAAACACTCAGAAAAAGTTCATGTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGACATTTTCCTTGGGTaGTACTTCAGGTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWDIFLG*YFRSNA
Trigger: GGCATTTGACCTGAAGTATCACCCAAGGAAAATGTC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCAGCACTGTGAGCACTaGTTATTTAAGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHQHCEH*LFKVTE
Trigger: CTCAGTCACCTTAAATAATCAGTGCTCACAGTGCTG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCTGAAATGCTGTGCATaGTGCGTATTAGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWLKCCA*CVLVGA
Trigger: AGCACCTACTAATACGCAGCATGCACAGCATTTCAG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCAGCAGGGTCTGGTTTaGCAGAACAAGTTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHQQGLV*QNKFKV
Trigger: CACTTTAAACTTGTTCTGGCAAACCAGACCCTGCTG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTGGAATAAAGGCACTTaGTCCTCTTGTCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHWNKGT*SSCQGL
Trigger: CAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGACAACTTCCTTCTCTaGAATAAAGGCACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHDNFLL*NKGTWS
Trigger: GGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTGTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTAAAGGCTATTTTGTaGTATGCCCTGCACGATCTC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLKAIL*YALHDL
Trigger: GAGATCGTGCAGGGCATACCACAAAATAGCCTTTAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCCTCTTGTCAAGGGTTaGGACACTCTGATTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHPLVKG*DTLILL
Trigger: TAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAAAAGACTCCAGGTACTaGGTGTGTAAACTCATGACC +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQKDSRY*VCKLMT
Trigger: GGTCATGAGTTTACACACTCAGTACCTGGAGTCTTT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACCCAAAGTTGCTGCCTaGAAGAGATGCATTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQPKVAA*KRCILY
Trigger: ATAGAGAATGCATCTCTTTCAGGCAGCAACTTTGGG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAAGGGTTGAGACACTCTaGTTCTTTTATCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQRVETL*FFYPSA
Trigger: TGCGGAAGGATAAAAGAATCAGAGTGTCTCAACCCT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTCCACATGGAAAACACTaGAGTTGCCCTGTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSPHGKH*SCPVRV
Trigger: AACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGG...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCTTTCAGCCTGCTGTTaGATTGTGCTACTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWLSACC*IVLLSK
Trigger: TTTGCTTAGTAGCACAATTCAACAGCAGGCTGAAAG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTGAACAACAGTGAGTaGATCCATGAAAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLNNSE*IHEKVG
Trigger: TCCAACCTTTTCATGGATTCACTCACTGTTGTTCAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCGTCCAGTTCTTCCATaGCCAGGAAAGTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHRPVLP*PGKLFS
Trigger: TGAAAATAACTTTCCTGGTCATGGAAGAACTGGACG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAACCTTCTTAACTGCTaGTTCATGTGGAGGGCATTA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWNLLNC*FMWRAL
Trigger: TAATGCCCTCCACATGAATCAGCAGTTAAGAAGGTT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCAGATGTGTTTGTCTTaGCTCACTAACAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWQMCLS*LTNSSF
Trigger: GAAGGAACTGTTAGTGAGTCAAGACAAACACATCTG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTCATCCACTGTGTTTaGTTGGACAACTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHFIHCV*LDNFLL
Trigger: GAGAAGGAAGTTGTCCAAGCAAACACAGTGGATGAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTGAAGGGGACCATCCATaGGCAACATGTAAAACTGGC +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSEGDHP*ATCKTG
Trigger: GCCAGTTTTACATGTTGCGCATGGATGGTCCCCTTC...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACCACAATCCCAAAGTTaGTGCCTGAAAGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQPQSQS*CLKEMH
Trigger: ATGCATCTCTTTCAGGCAGCAACTTTGGGATTGTGG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGATACTTCAGGTCAAATaGCGAGTTATGGCACGAAGA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWILQVK*RVMARR
Trigger: TCTTCGTGCCATAACTCGGCATTTGACCTGAAGTAT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAATGGAATAAAGGCACTTaGTCCTCTTGTCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQWNKGT*SSCQGL
Trigger: CAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCA...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTTGGTCAGTCTTGTGTaGGTACAGGTTTATATGTGC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWLVSLV*VQVYMC
Trigger: GCACATATAAACCTGTACCCACACAAGACTGACCAA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACATGCCAAACTGGCTGTaGTTTGCTTTCTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHMPNWL*FAFYVS
Trigger: AGAGACATAGAAAGCAAACCACAGCCAGTTTGGCAT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACATCTACAGCAGGGTCTaGTTTGCCAGAACAAGTTTA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHIYSRV*FARTSL
Trigger: TAAACTTGTTCTGGCAAACCAGACCCTGCTGTAGAT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACCAATGCAAAAATGTaGCTTTTTGGCCGCTTATTC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTNAKM*LFGRLF
Trigger: GAATAAGCGGCCAAAAAGTCACATTTTTGCATTGGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAATTTCCCATTCCACTaGAGGGTTACAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHNFPFH*RVTSHS
Trigger: AGAATGACTTGTAACCCTTCAGTGGAATGGGAAATT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAGGTTGAGTTGTTCATaGATGAGATGGAAAACAACC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWRLSCS*MRWKTT
Trigger: GGTTGTTTTCCATCTCATTCATGAACAACTCAACCT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGATGTCAATTCATTCCTaGGCCCTGAAAGGCATTTAT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWMSIHS*ALKGIY
Trigger: ATAAATGCCTTTCAGGGCTCAGGAATGAATTGACAT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGATCACTTTCCTTGGTaGACAAGGGTACTATTTAAC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHDHFPW*TRVLFN
Trigger: GTTAAATAGTACCCTTGTTCACCAAGGAAAGTGATC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAGAAGTTGGCAATCTaGTTTCATGTGCAATTCAGC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKKLAI*FHVQFS
Trigger: GCTGAATTGCACATGAAATCAGATTGCCAACTTCTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTCAAAGCATGATAATGTaGCAGGAGGACCACAGCATG +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSQSMIM*QEDHSM
Trigger: CATGCTGTGGTCCTCCTGGCACATTATCATGCTTTG...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACAATCCCAAAGTTGCTaGCTGAAAGAGATGCATTCT +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQQSQSC*LKEMHS
Trigger: AGAATGCATCTCTTTCAGGCAGCAACTTTGGGATTG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCCTTTTCAAAACGAGTaGTCATTTCTTCTTGAGACG +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHPFQNE*SFLLET
Trigger: CGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAAGGGTGGACTGAATaGAGACAGGACCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKGWTE*RQDLPH
Trigger: ATGTGGGAGGTCCTGTCTGCATTCAGTCCACCCTTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGAACACCACCCTATTTaGATACCAGAAATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHEHHPI*IPEISH
Trigger: ATGGGAAATTTCTGGTATGCAAATAGGGTGGTGTTC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAAAGATCACGTCATCTaGCTTACATTAGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWKDHVI*LTLVQS
Trigger: TGACTGGACTAATGTAAGGCAGATGACGTGATCTTT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTCTGGATCTCTCTCTaGATTGATACCACTACCAAA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHFWISL*IDTTTK
Trigger: TTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTCAAATGCCGAGTTATaGCACGAAGAGCATAAAGAA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWSNAEL*HEEHKE
Trigger: TTCTTTATGCTCTTCGTGCCATAACTCGGCATTTGA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTACTTTCAAATGGGATaGTTCATCAGGTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWYFQMG*FIRSDN
Trigger: GTTGTCTGACCTGATGAACCATCCCATTTGAAAGTA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAGATCTCTCTCTGGATTaGTACCACTACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQDLSLD*YHYQKQ
Trigger: TTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATC...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGTGCTCATTTCTTCTTaGGACGCCTCTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIVLISS*DASSSS
Trigger: GGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCAC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCATAGTCATCATACCTaGTTCCAAACATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWHSHHT*FQTYSE
Trigger: TTCACTGTATGTTTGGAATCAGGTATGATGACTATG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGTTTTGACAAGTTTCTaGATGTGCTCTTTTGTGATC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHVLTSF*MCSFVI
Trigger: GATCACAAAAGAGCACATTCAGAAACTTGTCAAAAC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAATTCATACTGGGACTaGGACAATGTACTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHNSYWD*DNVLSS
Trigger: TGAACTAAGTACATTGTCTCAGTCCCAGTATGAATT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGACACAATTTACACTTaGTACTGCATTAACATCTGG +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWDTIYT*YCINIW
Trigger: CCAGATGTTAATGCAGTATCAAGTGTAAATTGTGTC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACTTGGGGAGCCAGTTaGAAATGTGTAAAGATATTA +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTWGAS*KCVKIL
Trigger: TAATATCTTTACACATTTTCAACTGGCTCCCCAAGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACACTGAAACTTGCGTaGATCCTAAATTGCATCAAT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTLKLA*ILNCIN
Trigger: ATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACCAAAAACAAAGCTTaGCAAAGCATGATAATGTGC +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTKNKA*QSMIMC
Trigger: GCACATTATCATGCTTTGGCAAGCTTTGTTTTTGGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACCTTTTCAAAACGAGTaGTCATTTCTTCTTGAGACG +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQPFQNE*SFLLET
Trigger: CGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTGACAACTTCCTTCTCTaGAATAAAGGCACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSDNFLL*NKGTWS
Trigger: GGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTGTC...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTCCACTGTGTTTGCTTaGACAACTTCCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSSTVFA*TTSFSG
Trigger: TCCAGAGAAGGAAGTTGTCCAAGCAAACACAGTGGA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAATTCTGGATCTCTCTCTaGATTGATACCACTACCAAA +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQFWISL*IDTTTK
Trigger: TTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAA...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAGCTCTGCGCAGCATaGTTGTGTCAACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKLCAA*LCQHPH
Trigger: ATGAGGATGTTGACACAACCATGCTGCGCAGAGCTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTTCAAACAGGATCCTaGAATCCAAAAATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHFQTGS*NPKMQN
Trigger: GTTCTGCATTTTTGGATTCCAGGATCCTGTTTGAAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACTCCCATAGTCAGGTaGGTTAAAGAACAGATTATT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTPIVR*VKEQII
Trigger: AATAATCTGTTCTTTAACCCACCTGACTATGGGAGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTCCTCTTGTCAAGGGTTaGGACACTCTGATTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSPLVKG*DTLILL
Trigger: TAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGG...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAAGACTCCAGGTACTaGGTGTGTAAACTCATGACC +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKDSRY*VCKLMT
Trigger: GGTCATGAGTTTACACACTCAGTACCTGGAGTCTTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCCCAAAGTTGCTGCCTaGAAGAGATGCATTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIPKVAA*KRCILY
Trigger: ATAGAGAATGCATCTCTTTCAGGCAGCAACTTTGGG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAGGGTTGAGACACTCTaGTTCTTTTATCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIRVETL*FFYPSA
Trigger: TGCGGAAGGATAAAAGAATCAGAGTGTCTCAACCCT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAGTTTTGACAAGTTTCTaGATGTGCTCTTTTGTGATC +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQVLTSF*MCSFVI
Trigger: GATCACAAAAGAGCACATTCAGAAACTTGTCAAAAC...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAATCCAGGATAGAGTATaGACTACAAAGCTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQIQDRV*TTKLKV
Trigger: AACTTTCAGCTTTGTAGTTCATACTCTATCCTGGAT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAGGACACTTTTGCAGTaGTATGACAGGGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIRTLLQ*YDRGKV
Trigger: AACTTTCCCCCTGTCATATCACTGCAAAAGTGTCCT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTTCATCCACTGTGTTTaGTTGGACAACTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSFIHCV*LDNFLL
Trigger: GAGAAGGAAGTTGTCCAAGCAAACACAGTGGATGAA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAACCAAAAACAAAGCTTaGCAAAGCATGATAATGTGC +
Preference number: 4 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQTKNKA*QSMIMC
Trigger: GCACATTATCATGCTTTGGCAAGCTTTGTTTTTGGT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCCACAATCCCAAAGTTaGTGCCTGAAAGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIPQSQS*CLKEMH
Trigger: ATGCATCTCTTTCAGGCAGCAACTTTGGGATTGTGG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTAGCTGCAGCCATTATTaGAATATAGTGCCTGTATGG +
Preference number: 4 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSSCSHY*NIVPVW
Trigger: CCATACAGGCACTATATTGCAATAATGGCTGCAGCT...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTGGTTCAACAGCGCATaGTTTTCCTCCACCAGATTT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIWFNSA*FSSTRF
Trigger: AAATCTGGTGGAGGAAAAGCATGCGCTGTTGAACCA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAACTGGCTGTGGTTTaGTTTCTATGTCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKLAVV*FLCLLF
Trigger: AAATAAGAGACATAGAAAGCAAACCACAGCCAGTTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCAATCTGATTTCATGTaGAATTCAGCTACAGTCTTA +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHQSDFM*NSATVL
Trigger: TAAGACTGTAGCTGAATTGCACATGAAATCAGATTG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTTTGACACTGAAACTTaGGTGAATCCTAAATTGCAT +
Preference number: 4 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHFDTET*VNPKLH
Trigger: ATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGACTAACAGTTCCTTCTaGATCTGTCCAAATAATGTT +
Preference number: 4 (lower is better)
Translates to: PAKFRKRKSLNITKETPWTNSSF*ICPNNV
Trigger: AACATTATTTGGACAGATGCAGAAGGAACTGTTAGT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCTTTTTCTGAGTGTTTaGACTGCCGCCAGTAACTAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSILFLSV*TAASNY
Trigger: ATAGTTACTGGCGGCAGTTCAAACACTCAGAAAAAG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAAACACAGTTTACGTTaGCGGCCACCTAGAATAGAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIKHSLR*RPPRID
Trigger: ATCTATTCTAGGTGGCCGTCAACGTAAACTGTGTTT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCAATCCCAAAGTTGCTaGCTGAAAGAGATGCATTCT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIQSQSC*LKEMHS
Trigger: AGAATGCATCTCTTTCAGGCAGCAACTTTGGGATTG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAGCTGCAGCCATTATTaGAATATAGTGCCTGTATGG +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSISCSHY*NIVPVW
Trigger: CCATACAGGCACTATATTGCAATAATGGCTGCAGCT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTTCTGGGGAAGGGAATaGTTTGGCATTATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIFWGRE*FGIMKG
Trigger: TCCTTTCATAATGCCAAAGCATTCCCTTCCCCAGAA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGCAGTTGTGTCCTACTaGATAGTTGTAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIAVVSY*IVVSIS
Trigger: AGAGATGCTTACAACTATCCAGTAGGACACAACTGC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTCCAACTACAAACAATaGAAAGTAGTGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSISNYKQ*KVVLLS
Trigger: ACTGAGGAGCACTACTTTGCATTGTTTGTAGTTGGA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR GCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTATTCACAACCTGAAATaGTGTGCATGCTGCGTATTA +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIIHNLK*CACCVL
Trigger: TAATACGCAGCATGCACAGCATTTCAGGTTGTGAAT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGGGAAGGGAATGCTTTaGCATTATGAAAGGAACATT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIGKGML*HYERNI
Trigger: AATGTTCCTTTCATAATGCCAAAGCATTCCCTTCCC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTCAAGTGCACCTAGCTaGAGAGAAGAACTATTACAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSISSAPS*REELLH
Trigger: ATGTAATAGTTCTTCTCTCCAGCTAGGTGCACTTGA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGTCTTTACACATGTATaGCATTTTCCTTGGGTGATA +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIVFTHV*HFPWVI
Trigger: TATCACCCAAGGAAAATGTCATACATGTGTAAAGAC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGAGGTCACTCTTTGCTaGATTCCAATATCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIEVTLC*IPISEK
Trigger: TTTTTCAGATATTGGAATTCAGCAAAGAGTGACCTC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTACTGATTATTTAAGGTaGCTGAGGATTACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSITDYLR*LRITVS
Trigger: ACTGACAGTAATCCTCAGTCACCTTAAATAATCAGT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR TCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTCAGAGAGATTCTCTCTaGTATTCTTTCGGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIQRDSL*YSFGRN
Trigger: ATTTCTACCGAAAGAATATCAGAGAGAATCTCTCTG...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTGCAAAGAAAATTTTTaGTCAGTCTTGTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSICKENF*SVLCGY
Trigger: GTACCCACACAAGACTGACCAAAAATTTTCTTTGCA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CCA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTATTAAAGTTTTAGAATaGCCAGAGAGGTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIIKVLE*PERSLF
Trigger: AAAGAGTGACCTCTCTGGCCATTCTAAAACTTTAAT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS GCA 90 bp TCCGGCAGTTGGTACAGAGCAGGTAGTTGGCGGCGGCCGACGGGCTaGCGCCGCCCCGGTTCATCGTGGCTGCGGGCGCCGAGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: SGSWYRAGSWRRPTG*RRPGSSWLRAPRRE
Trigger: CTCTCGCCTCGGCGCCCGCAGCCACGATGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS TCA 90 bp CCTCAGCCTCCTCAAGGCGGGATGTCGGGAGGAGAGGCGACTGCCTaGAAGCTAGCGGCACTGCCAGAGGCGACCACCGCGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PQPPQGGMSGGEATA*KLAALPEATTAAAA
Trigger: GGCAGCTGCCGCGGTGGTCGCCTCTGGCAGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCCTCCCGACATCCCGCCTTGAGGAGGCTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS GCA 90 bp TCCGCCTCAGCCTCCTCAAGGCGGGATGTCGGGAGGAGAGGCGACTaGCTGAAAGCTAGCGGCACTGCCAGAGGCGACCACCGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: SASASSRRDVGRRGD*LKASGTARGDHRGS
Trigger: GCTGCCGCGGTGGTCGCCTCTGGCAGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCCTCCCGACATCCCGCCTTGAGGAGGCTGAGGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS GCA 90 bp CGGGCCCCAGAGATAACTTGCATCGCCTACTGGCAAGGAGCTCTGTaGTCACTGGAGCCCAGCTCCCCACCCGGCCATGGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RAPEITCIAYWQGAL*SLEPSSPPGHGRGH
Trigger: GTGGCCACGGCCATGGCCGGGTGGGGAGCTGGGCTCCAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000542176.1
ENST00000634898.1
CDS CCA 90 bp TATCCTTCCGCAGCACTTTCCGGCAGTTGGTACAGAGCAGGTAGTTaGCGGCGGCCGACGGGCTGCCGCCGCCCCGGTTCATCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: YPSAALSGSWYRAGS*RRPTGCRRPGSSWL
Trigger: CAGCCACGATGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGCTGCGGAAGGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS GCA 90 bp GAGCCAGGTCTCCCGAAGGGGCTAGCAATGCGCGTCCGAGTCGAATaGGGGTTCCCGATGCTAGACGCCCGCAACCTGCTCCCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: EPGLPKGLAMRVRVE*GFPMLDARNLLPSE
Trigger: CTCACTCGGGAGCAGGTTGCGGGCGTCTAGCATCGGGAACCCGCATTCGACTCGGACGCGCATTGCTAGCCCCTTCGGGAGACCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS TCA 90 bp CGAATGCGGGTTCCCGATGCTAGACGCCCGCAACCTGCTCCCGAGTaGGAACAAAGGCCGGCGCAGAGCGAGAACCTGATTGGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: RMRVPDARRPQPAPE*EQRPAQSENLIGAR
Trigger: CCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCACTCGGGAGCAGGTTGCGGGCGTCTAGCATCGGGAACCCGCATTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS TCA 90 bp AACCTGCTCCCGAGTGAGAACAAAGGCCGGCGCAGAGCGAGAACCTaGTTGGTGCCCGGTCCTCACTCGTGTCCTCCGGGCCCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: NLLPSENKGRRRART*LVPGPHSCPPGPRD
Trigger: ATCTCTGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCACTCGGGAGCAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS GCA 90 bp TGGTGCCCGGTCCTCACTCGTGTCCTCCGGGCCCCAGAGATAACTTaGATCGCCTACTGGCAAGGAGCTCTGTGCTCACTGGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: WCPVLTRVLRAPEIT*IAYWQGALCSLEPS
Trigger: GCTGGGCTCCAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000542176.1
CDS GCA 90 bp TCCCGAGTGAGAACAAAGGCCGGCGCAGAGCGAGAACCTGATTGGTaGCCGGTCCTCACTCGTGTCCTCCGGGCCCCAGAGATAACTTGC +
Preference number: 5 (lower is better)
Translates to: SRVRTKAGAEREPDW*PVLTRVLRAPEITC
Trigger: GCAAGTTATCTCTGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCACTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS CCA 90 bp TGCTCCCGAGTGAGAACAAAGGCCGGCGCAGAGCGAGAACCTGATTaGTGCCCGGTCCTCACTCGTGTCCTCCGGGCCCCAGAGATAACT +
Preference number: 5 (lower is better)
Translates to: CSRVRTKAGAEREPD*CPVLTRVLRAPEIT
Trigger: AGTTATCTCTGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCACTCGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS GCA 90 bp ATGGATTCATTCCAGCATCGTGTCCTCCGGGCCCCAGAGATAACTTaGATCGCCTACTGGCAAGGAGCTCTGTGCTCACTGGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: MDSFQHRVLRAPEIT*IAYWQGALCSLEPS
Trigger: GCTGGGCTCCAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGATGCTGGAATGAATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634898.1
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTCCTCACCGGCCCGTaGTTCCACCCGCCCCCATCT +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLLTGP*FHPPPS
Trigger: AGATGGGGGCGGGTGGAACAACGGGCCGGTGAGGAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCTCTGCGCAGCATGGTaGTGTCAACATCCTCATGGG +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHLCAAW*CQHPHG
Trigger: CCCATGAGGATGTTGACACAACCATGCTGCGCAGAG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAGTAGCAAGGCCATGTaGCAAGTGGACCTGACAGGG +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHSSKAM*QVDLTG
Trigger: CCCTGTCAGGTCCACTTGCAACATGGCCTTGCTACT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS TCA 90 bp ACTTCCTTCTCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTTaGGACACTCTGATTCTTTTATCCTTCCGCAGCACTTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TSFSGIKALGPLVKG*DTLILLSFRSTFRQ
Trigger: CTGCCGGAAAGTGCTGCGGAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAGGCACTTGGTCCTCTaGTCAAGGGTTGAGACACTC +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWRHLVL*SRVETL
Trigger: GAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCTGAGCTCGGAATGTaGGCAAATGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWPELGM*ANALLL
Trigger: GAGGAGAAGAGCATTTGCCAACATTCCGAGCTCAGG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS GCA 90 bp TTATTGCAATATAGTGCCTGTATGGTAGAGGAAGGGGACCATCCATaGGCAACATGTAAAACTGGCTCCGCAAGAAAGACTCCAGGTACT +
Preference number: 5 (lower is better)
Translates to: LLQYSACMVEEGDHP*ATCKTGSARKTPGT
Trigger: AGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCATGGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
ENST00000634898.1
CDS-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAAGGCACTTGGTCCTCTaGTCAAGGGTTGAGACACTC +
Preference number: 5 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQRHLVL*SRVETL
Trigger: GAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGATGACCTGTGTGATGTaGTCCAGACGACCGGATGTA +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWMTCVM*SRRPDV
Trigger: TACATCCGGTCGTCTGGACAACATCACACAGGTCAT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS GCA 90 bp TTCTGGATCTCTCTCTGGATTGATACCACTACCAAAAACAAAGCTTaGCAAAGCATGATAATGTGCCAGGAGGACCACAGCATGTACCAG +
Preference number: 5 (lower is better)
Translates to: FWISLWIDTTTKNKA*QSMIMCQEDHSMYQ
Trigger: CTGGTACATGCTGTGGTCCTCCTGGCACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
CDS CCA 90 bp TATAGTCCTGAGCTCGGAATGTTGGCAAATGCTCTTCTCCTCGTCTaGCAAAGTCTTCATACCCAAAACCAGGGTCTTCAATATATCGAG +
Preference number: 5 (lower is better)
Translates to: YSPELGMLANALLLV*QSLHTQNQGLQYIE
Trigger: CTCGATATATTGAAGACCCTGGTTTTGGGTATGAAGACTTTGCCAGACGAGGAGAAGAGCATTTGCCAACATTCCGAGCTCAGGACTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000536441.7
CDS-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAATGACCTGTGTGATGTaGTCCAGACGACCGGATGTA +
Preference number: 5 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQMTCVM*SRRPDV
Trigger: TACATCCGGTCGTCTGGACAACATCACACAGGTCAT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCCTTCCTTATCAGACTaGGGGAGCCAGTTGAAAATG +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHPSLSD*GSQLKM
Trigger: CATTTTCAACTGGCTCCCCAAGTCTGATAAGGAAGG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS GCA 90 bp ATTGATACCACTACCAAAAACAAAGCTTGCCAAAGCATGATAATGTaGCAGGAGGACCACAGCATGTACCAGTTCAGGCAGAGACCAATT +
Preference number: 5 (lower is better)
Translates to: IDTTTKNKACQSMIM*QEDHSMYQFRQRPI
Trigger: AATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGGCACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
CDS-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAATCCACTGTGTTTGCTaGGACAACTTCCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQIHCVC*DNFLLW
Trigger: CCAGAGAAGGAAGTTGTCCAAGCAAACACAGTGGAT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGTTCATCCACTGTGTTaGCTTGGACAACTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWVHPLC*LGQLPS
Trigger: AGAAGGAAGTTGTCCAAGCAAACACAGTGGATGAAC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCTTGCACATTTAAGTTaGGCACAATGTGAGCGCAAG +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWLAHLS*AQCERK
Trigger: CTTGCGCTCACATTGTGCCAAACTTAAATGTGCAAG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGGAACACCACCCTATTaGCATACCAGAAATTTCCCA +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHGTPPY*HTRNFP
Trigger: TGGGAAATTTCTGGTATGCAAATAGGGTGGTGTTCC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTT +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHSSCQG*RHSDSF
Trigger: AAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGGATCTCTCTCTGGATaGATACCACTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHGSLSG*IPLPKT
Trigger: TGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAAGTGCTCATTTCTTCTaGAGACGCCTCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQSAHFF*RRLFIF
Trigger: GAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACT...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTTGTCCAGTGAGCAGCTaGGTTCAACAGCGCATGCTT +
Preference number: 5 (lower is better)
Translates to: PPFDTETCVNPKLHQLSICPVSS*VQQRML
Trigger: AAGCATGCGCTGTTGAACCAAGCTGCTCACTGGACA...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTACAAAGGAAACTCCTaGGCCACCCAACTAATACAT +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHYKGNS*ATQLIH
Trigger: ATGTATTAGTTGGGTGGCCAAGGAGTTTCCTTTGTA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAAGGATCTCTCTCTGGATaGATACCACTACCAAAAACA +
Preference number: 5 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQGSLSG*IPLPKT
Trigger: TGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCC...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTCACAAACGCAGAAATaGTTGACTGATATTAGCCTG +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWSQTQK*LTDISL
Trigger: CAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTGGAAAACACTGAAGTaGCCCTGTCAGGGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSWKTLK*PCQGSK
Trigger: CTTAGAACCCTGACAGGGCAACTTCAGTGTTTTCCA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACGTGCAAAGAAAATTTTaGGTCAGTCTTGTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHVQRKF*VSLVWV
Trigger: TACCCACACAAGACTGACCAAAAATTTTCTTTGCAC...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAATATAGCTGGATGGTaGAGGGATTTAGAAGGAGTT +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHNIAGW*RDLEGV
Trigger: AACTCCTTCTAAATCCCTCAACCATCCAGCTATATT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCTGAAAGGCATTTATaGGATACTACTATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWPERHL*DTTIRL
Trigger: CAACCTGATAGTAGTATCCAATAAATGCCTTTCAGG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGTTTGGATCACTTTCCTaGGTGAACAAGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWFGSLS*VNKGTI
Trigger: AATAGTACCCTTGTTCACCAAGGAAAGTGATCCAAA...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACCAAACTGGCTGTGGTTaGCTTTCTATGTCTCTTATT +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHQTGCG*LSMSLI
Trigger: AATAAGAGACATAGAAAGCAAACCACAGCCAGTTTG...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTGTTCATCCACTGTGTTaGCTTGGACAACTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSVHPLC*LGQLPS
Trigger: AGAAGGAAGTTGTCCAAGCAAACACAGTGGATGAAC...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTACCAAAAACAAAGCTaGCCAAAGCATGATAATGTG +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHYQKQS*PKHDNV
Trigger: CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCAAACGCAGAAATTGTaGACTGATATTAGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWQTQKL*TDISLN
Trigger: ATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTG...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGGATGCATTCTCTATGTaGTTGTCATTAGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWDAFSM*LSLARS
Trigger: TGATCTTGCTAATGACAACAACATAGAGAATGCATC...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACAAGATTTTTCAGTCTTaGTGGCACATATTCCAAACC +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHKIFQS*WHIFQT
Trigger: GGTTTGGAATATGTGCCACAAAGACTGAAAAATCTT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACACGTTTTTAAACCAGTaGTCCAAGGAGATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHTFLNQ*SKEIFL
Trigger: CAGAAAAATCTCCTTGGACAACTGGTTTAAAAACGT...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCAGCGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGAATGACATCCTCAACTaGAAAGTTGTGAAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: PAKFRKRKSLNITKETPWNDILN*KVVKLG
Trigger: ACCTAACTTCACAACTTTCAAGTTGAGGATGTCATT...CCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CGAAATTCAGAAAGCGGAAGTCTCTCAACATTACAAAGGAAACTCCTTGGCCACTACTATCAGGTTGAGTaGTTCATGAATGAGATGGAA +
Preference number: 5 (lower is better)
Translates to: RNSESGSLSTLQRKLLGHYYQVE*FMNEME
Trigger: TTCCATCTCATTCATGAACAACTCAACCTGATAGTA...GTGGCCAAGGAGTTTCCTTTGTAATGTTGAGAGACTTCCGCTTTCTGAATTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS CCA 90 bp GGTCGGTCAGTACCTTGTTCATCTTTGACTACTTCAACCTTAGAATaGTGTACATGTGAGGTAAACTTCTGGTCTAGTTTTTACAGCTTT +
Preference number: 5 (lower is better)
Translates to: GRSVPCSSLTTSTLE*CTCEVNFWSSFYSF
Trigger: AAAGCTGTAAAAACTAGACCAGAAGTTTACCTCACATGTACACCATTCTAAGGTTGAAGTAGTCAAAGATGAACAAGGTACTGACCGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634898.1
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTT +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSSSCQG*RHSDSF
Trigger: AAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTATTAGCCTGAATCCATaGGAGATTTCTGGATCTCTC +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSISLNP*EISGSL
Trigger: GAGAGATCCAGAAATCTCCAATGGATTCAGGCTAAT...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CTCTCAACTCAATCTGAAATACATTCAAGGATGAACCAGCCTGAGGGAAAGCAACAAACGCAGAAATTGTaGACTGATATTAGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: LSTQSEIHSRMNQPEGKQQTQKL*TDISLN
Trigger: ATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTG...TTGCTTTCCCTCAGGCTGGTTCATCCTTGAATGTATTTCAGATTGAGTTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAGTGCTCATTTCTTCTaGAGACGCCTCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: PPFDTETCVNPKLHQLSISAHFF*RRLFIF
Trigger: GAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTATTAGCCTGAATCCATaGGAGATTTCTGGATCTCTC +
Preference number: 5 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIISLNP*EISGSL
Trigger: GAGAGATCCAGAAATCTCCAATGGATTCAGGCTAAT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTCACAAACGCAGAAATaGTTGACTGATATTAGCCTG +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSSQTQK*LTDISL
Trigger: CAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTTACCAAAAACAAAGCTaGCCAAAGCATGATAATGTG +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSYQKQS*PKHDNV
Trigger: CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTA...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTGATGCATTCTCTATGTaGTTGTCATTAGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSDAFSM*LSLARS
Trigger: TGATCTTGCTAATGACAACAACATAGAGAATGCATC...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp AATCATTTTTACATATCCACATGGAAAACACTGAAGTTGCCCTGTCAGGGTTCTAAGATTTTTCAGTCTTaGTGGCACATATTCCAAACC +
Preference number: 5 (lower is better)
Translates to: NHFYISTWKTLKLPCQGSKIFQS*WHIFQT
Trigger: GGTTTGGAATATGTGCCACAAAGACTGAAAAATCTT...AGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTGACTTGGGGAGCCAGTaGAAAATGTGTAAAGATATT +
Preference number: 5 (lower is better)
Translates to: PPFDTETCVNPKLHQLSIDLGSQ*KMCKDI
Trigger: AATATCTTTACACATTTTCAACTGGCTCCCCAAGTC...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS-3UTR CAA 90 bp CCGCCATTTGACACTGAAACTTGCGTGAATCCTAAATTGCATCAATTATCTATTAATTTTTGGTCAGTCTaGTGTGGGTACAGGTTTATA +
Preference number: 5 (lower is better)
Translates to: PPFDTETCVNPKLHQLSINFWSV*CGYRFI
Trigger: TATAAACCTGTACCCACACAAGACTGACCAAAAATT...AATAGATAATTGATGCAATTTAGGATTCACGCAAGTTTCAGTGTCAAATGGCGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS CAA 72 bp CGGCGGAGACGGCGGCGGCTGCTCCTCACCGGCCCGTaGTTCCACCCGCCCCCATCTTCCAGACCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: RRRRRRLLLTGP*FHPPPSSRPPP
Trigger: GGGCGGGGGTCTGGAAGATGGGGGCGGGTGGAACAACGGGCCGGTGAGGAGCAGCCGCCGCCGTCTCCGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536441.7
CDS CCA 72 bp GCAGCACTTTCCGGCAGTTGGTACAGAGCAGGTAGTTaGCGGCGGCCGACGGGCTGCCGCCGCCCCGGTTCA +
Preference number: 6 (lower is better)
Translates to: AALSGSWYRAGS*RRPTGCRRPGS
Trigger: TGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS TCA 72 bp CCTCAAGGCGGGATGTCGGGAGGAGAGGCGACTGCCTaGAAGCTAGCGGCACTGCCAGAGGCGACCACCGCG +
Preference number: 6 (lower is better)
Translates to: PQGGMSGGEATA*KLAALPEATTA
Trigger: CGCGGTGGTCGCCTCTGGCAGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCCTCCCGACATCCCGCCTTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS GCA 72 bp GCCTCCTCAAGGCGGGATGTCGGGAGGAGAGGCGACTaGCTGAAAGCTAGCGGCACTGCCAGAGGCGACCAC +
Preference number: 6 (lower is better)
Translates to: ASSRRDVGRRGD*LKASGTARGDH
Trigger: GTGGTCGCCTCTGGCAGTGCCGCTAGCTTTCAGGCAGTCGCCTCTCCTCCCGACATCCCGCCTTGAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS TCA 72 bp CCGAGTGAGAACAAAGGCCGGCGCAGAGCGAGAACCTaGTTGGTGCCCGGTCCTCACTCGTGTCCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: PSENKGRRRART*LVPGPHSCPPG
Trigger: GCCCGGAGGACACGAGTGAGGACCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCACTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS GCA 72 bp AGAACAAAGGCCGGCGCAGAGCGAGAACCTGATTGGTaGCCGGTCCTCACTCGTGTCCTCCGGGCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: RTKAGAEREPDW*PVLTRVLRAPE
Trigger: CTCTGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS GCA 72 bp CTCCCGAAGGGGCTAGCAATGCGCGTCCGAGTCGAATaGGGGTTCCCGATGCTAGACGCCCGCAACCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPKGLAMRVRVE*GFPMLDARNLL
Trigger: GAGCAGGTTGCGGGCGTCTAGCATCGGGAACCCGCATTCGACTCGGACGCGCATTGCTAGCCCCTTCGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS CCA 72 bp GTGAGAACAAAGGCCGGCGCAGAGCGAGAACCTGATTaGTGCCCGGTCCTCACTCGTGTCCTCCGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: VRTKAGAEREPD*CPVLTRVLRAP
Trigger: TGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCAATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS CAA 90 bp TTGGTGCCCGGTCCTCACTCGTGTCCTCCGGGCCCCAGAGATAACTaGCATCGCCTACTGGCAAGGAGCTCTGTGCTCACTGGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LVPGPHSCPPGPRDN*HRLLARSSVLTGAQ
Trigger: CTGGGCTCCAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGAGTGAGGACCGGGCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000542176.1
CDS TCA 72 bp GTTCCCGATGCTAGACGCCCGCAACCTGCTCCCGAGTaGGAACAAAGGCCGGCGCAGAGCGAGAACCTGATT +
Preference number: 6 (lower is better)
Translates to: VPDARRPQPAPE*EQRPAQSENLI
Trigger: AATCAGGTTCTCGCTCTGCGCCGGCCTTTGTTCTCACTCGGGAGCAGGTTGCGGGCGTCTAGCATCGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS GCA 72 bp GTCCTCACTCGTGTCCTCCGGGCCCCAGAGATAACTTaGATCGCCTACTGGCAAGGAGCTCTGTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: VLTRVLRAPEIT*IAYWQGALCSL
Trigger: CAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGAGTGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000542176.1
CDS CAA 72 bp GGTCCTCACTCGTGTCCTCCGGGCCCCAGAGATAACTaGCATCGCCTACTGGCAAGGAGCTCTGTGCTCACT +
Preference number: 6 (lower is better)
Translates to: GPHSCPPGPRDN*HRLLARSSVLT
Trigger: AGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGAGTGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000537480.1
ENST00000542176.1
CDS GCA 72 bp TTCCAGCATCGTGTCCTCCGGGCCCCAGAGATAACTTaGATCGCCTACTGGCAAGGAGCTCTGTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: FQHRVLRAPEIT*IAYWQGALCSL
Trigger: CAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGATGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634898.1
CDS CAA 90 bp AATGGATTCATTCCAGCATCGTGTCCTCCGGGCCCCAGAGATAACTaGCATCGCCTACTGGCAAGGAGCTCTGTGCTCACTGGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: NGFIPASCPPGPRDN*HRLLARSSVLTGAQ
Trigger: CTGGGCTCCAGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGATGCTGGAATGAATCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634898.1
CDS CAA 72 bp ATTCCAGCATCGTGTCCTCCGGGCCCCAGAGATAACTaGCATCGCCTACTGGCAAGGAGCTCTGTGCTCACT +
Preference number: 6 (lower is better)
Translates to: IPASCPPGPRDN*HRLLARSSVLT
Trigger: AGTGAGCACAGAGCTCCTTGCCAGTAGGCGATGCAAGTTATCTCTGGGGCCCGGAGGACACGATGCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634898.1
CDS GCA 72 bp TATAGTGCCTGTATGGTAGAGGAAGGGGACCATCCATaGGCAACATGTAAAACTGGCTCCGCAAGAAAGACT +
Preference number: 6 (lower is better)
Translates to: YSACMVEEGDHP*ATCKTGSARKT
Trigger: AGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCATGGATGGTCCCCTTCCTCTACCATACAGGCACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
ENST00000634898.1
CDS CCA 72 bp GAGCTCGGAATGTTGGCAAATGCTCTTCTCCTCGTCTaGCAAAGTCTTCATACCCAAAACCAGGGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: ELGMLANALLLV*QSLHTQNQGLQ
Trigger: TTGAAGACCCTGGTTTTGGGTATGAAGACTTTGCCAGACGAGGAGAAGAGCATTTGCCAACATTCCGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000536441.7
CDS CAA 90 bp AACTTCCTTCTCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTTATCCTTCCGCAGCACTTTCCGGCA +
Preference number: 6 (lower is better)
Translates to: NFLLWNKGTWSSCQG*RHSDSFILPQHFPA
Trigger: TGCCGGAAAGTGCTGCGGAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS GCA 72 bp ACTACCAAAAACAAAGCTTGCCAAAGCATGATAATGTaGCAGGAGGACCACAGCATGTACCAGTTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: TTKNKACQSMIM*QEDHSMYQFRQ
Trigger: CTGCCTGAACTGGTACATGCTGTGGTCCTCCTGGCACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
CDS CCA 72 bp ATGATTTTCCCAGGTATAGTCCTGAGCTCGGAATGTTaGCAAATGCTCTTCTCCTCGTCTGGCAAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: MIFPGIVLSSEC*QMLFSSSGKVF
Trigger: GAAGACTTTGCCAGACGAGGAGAAGAGCATTTGCCAACATTCCGAGCTCAGGACTATACCTGGGAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000536441.7
CDS CAA 72 bp CATGATTTTCCCAGGTATAGTCCTGAGCTCGGAATGTaGGCAAATGCTCTTCTCCTCGTCTGGCAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: HDFPRYSPELGM*ANALLLVWQSL
Trigger: AAGACTTTGCCAGACGAGGAGAAGAGCATTTGCCAACATTCCGAGCTCAGGACTATACCTGGGAAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000536441.7
CDS CAA 72 bp CTCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTTATCCTTCCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: LWNKGTWSSCQG*RHSDSFILPQH
Trigger: GTGCTGCGGAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS TCA 72 bp TCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTTaGGACACTCTGATTCTTTTATCCTTCCGCAGCACT +
Preference number: 6 (lower is better)
Translates to: SGIKALGPLVKG*DTLILLSFRST
Trigger: AGTGCTGCGGAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416495.6
ENST00000536441.7
CDS CAA 72 bp CTCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTTATCCTAGTGAGTACT +
Preference number: 6 (lower is better)
Translates to: LWNKGTWSSCQG*RHSDSFILVST
Trigger: AGTACTCACTAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537480.1
CDS CAA 72 bp AATCATCAGTTCTTTGTAGGGCGGTCGGTCAGTACCTaGTTCATCTTTGACTACTTCAACCTTAGAATGGTG +
Preference number: 6 (lower is better)
Translates to: NHQFFVGRSVST*FIFDYFNLRMV
Trigger: CACCATTCTAAGGTTGAAGTAGTCAAAGATGAACAAGGTACTGACCGACCGCCCTACAAAGAACTGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634898.1
CDS CAA 90 bp AACTTCCTTCTCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTTATCCTAGTGAGTACTCTGGAAATG +
Preference number: 6 (lower is better)
Translates to: NFLLWNKGTWSSCQG*RHSDSFILVSTLEM
Trigger: CATTTCCAGAGTACTCACTAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537480.1
CDS TCA 72 bp TCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTTaGGACACTCTGATTCTTTTATCCTCTTCTAAAGCT +
Preference number: 6 (lower is better)
Translates to: SGIKALGPLVKG*DTLILLSSSKA
Trigger: AGCTTTAGAAGAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278499.6
CDS TCA 72 bp TCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTTaGGACACTCTGATTCTTTTATCCTTGTCCATTATG +
Preference number: 6 (lower is better)
Translates to: SGIKALGPLVKG*DTLILLSLSIM
Trigger: CATAATGGACAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542176.1
CDS CAA 72 bp CTCTGGAATAAAGGCACTTGGTCCTCTTGTCAAGGGTaGAGACACTCTGATTCTTTTATCCTTGTCCATTAT +
Preference number: 6 (lower is better)
Translates to: LWNKGTWSSCQG*RHSDSFILVHY
Trigger: ATAATGGACAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542176.1
CDS CAA 90 bp TGTTTATCTTATGTGAAAGGTCTTTACACATGTATGACATTTTCCTaGGGTGATACTTCAGGTCAAATGCCGAGTTATGGCACGAAGAGC +
Preference number: 6 (lower is better)
Translates to: CLSYVKGLYTCMTFS*GDTSGQMPSYGTKS
Trigger: GCTCTTCGTGCCATAACTCGGCATTTGACCTGAAGTATCACCCAAGGAAAATGTCATACATGTGTAAAGACCTTTCACATAAGATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278499.6
ENST00000536441.7
CDS CAA 72 bp CCAAAGTTGCTGCCTGAAAGAGATGCATTCTCTATGTaGTTGTCATTAGCAAGATCACAAACGCAGAAATTG +
Preference number: 6 (lower is better)
Translates to: PKLLPERDAFSM*LSLARSQTQKL
Trigger: CAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATCTCTTTCAGGCAGCAACTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
CDS CAA 90 bp AGATCACAAACGCAGAAATTGTTGACTGATATTAGCCTGAATCCATaGGAGATTTCTGGATCTCTCTCTGGATTGATACCACTACCAAAA +
Preference number: 6 (lower is better)
Translates to: RSQTQKLLTDISLNP*EISGSLSGLIPLPK
Trigger: TTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAATGGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
CDS CAA 90 bp GCATTCTCTATGTTGTTGTCATTAGCAAGATCACAAACGCAGAAATaGTTGACTGATATTAGCCTGAATCCATTGGAGATTTCTGGATCT +
Preference number: 6 (lower is better)
Translates to: AFSMLLSLARSQTQK*LTDISLNPLEISGS
Trigger: AGATCCAGAAATCTCCAATGGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7
CDS TCA 72 bp AGCAGAATCATTTTTACATATCCACATGGAAAACACTaGAGTTGCCCTGTCAGGGTTCTAAGAACAACTAAA +
Preference number: 6 (lower is better)
Translates to: SRIIFTYPHGKH*SCPVRVLRTTK
Trigger: TTTAGTTGTTCTTAGAACCCTGACAGGGCAACTTCAGTGTTTTCCATGTGGATATGTAAAAATGATTCTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416495.6
CDS CAA 72 bp ATGTTGTTGTCATTAGCAAGATCACAAACGCAGAAATaGTTGACTGATATTAGCCTGAATCCATTGGAGATT +
Preference number: 6 (lower is better)
Translates to: MLLSLARSQTQK*LTDISLNPLEI
Trigger: AATCTCCAATGGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278499.6
ENST00000416495.6
ENST00000536441.7