RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SESN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000130766

Ensembl transcript IDs: ENST00000253063.4, ENST00000645231.2

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGGTTGCTTCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTaGCCAGGCTCCTCTCCTGCCCCGCCCAGCAGCAGCACGGCCCTT +
Preference number: 1 (lower is better)
Translates to: AGCFSAPARVFNVAH*PGSSPAPPSSSTAL
Trigger: AAGGGCCGTGCTGCTGCTGGGCGGGGCAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGAAGCAACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp CTGGCCAGGCTCCTCTCCTGCCCCGCCCAGCAGCAGCACGGCCCTTaGCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAG +
Preference number: 1 (lower is better)
Translates to: LARLLSCPAQQQHGP*LSSVPSKLVREEAQ
Trigger: CTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTGCTGCTGGGCGGGGCAGGAGAGGAGCCTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp TCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGTGCTGGCCTCTaGGAGGCAGGTGCAGCTCTGGGAGAACAGAATTCTCCCTCTCCT +
Preference number: 1 (lower is better)
Translates to: SAAGPLEAGEWGAGL*EAGAALGEQNSPSP
Trigger: AGGAGAGGGAGAATTCTGTTCTCCCAGAGCTGCACCTGCCTCGCAGAGGCCAGCACCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp CACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTaGTTCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCA +
Preference number: 1 (lower is better)
Translates to: HLLAGRAFRPEGGAG*FSAPARVFNVAHWP
Trigger: TGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp TGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATaGCCCAGGGGCAGGGTCCAAACAAGAACCCTGGTGCCTCCCGCC +
Preference number: 1 (lower is better)
Translates to: CGSQRFGNVAMVTWP*PRGRVQTRTLVPPA
Trigger: GGCGGGAGGCACCAGGGTTCTTGTTTGGACCCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp ACTCAGACCCACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTTaGCAATGTAGCCATGGTCACCTGGCCATGGCCCAGGGGCAGGGT +
Preference number: 1 (lower is better)
Translates to: TQTHPLSLQLWQSEV*QCSHGHLAMAQGQG
Trigger: ACCCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp TCTCCTGCCCCGCCCAGCAGCAGCACGGCCCTTGCCTTTCTTCAGTaGCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGCTAGAAGAA +
Preference number: 1 (lower is better)
Translates to: SPAPPSSSTALAFLQ*PPNWSERRHRLLEE
Trigger: TTCTTCTAGCAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTGCTGCTGGGCGGGGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp AATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCTCTGCCTCTGTaGGCAGGGGAAGGAGGAAGGGTGTGGTCCCTTAGGATCTCCAAG +
Preference number: 1 (lower is better)
Translates to: NSELGPASFLCPLPL*AGEGGRVWSLRISK
Trigger: CTTGGAGATCCTAAGGGACCACACCCTTCCTCCTTCCCCTGCCCACAGAGGCAGAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp TGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTaGCCATGGCCCAGGGGCAGGGTCCAAACAAGAACCCTGGTGCCT +
Preference number: 1 (lower is better)
Translates to: CSCGSQRFGNVAMVT*PWPRGRVQTRTLVP
Trigger: AGGCACCAGGGTTCTTGTTTGGACCCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp TGCCACCTAAGCCATCTAGAAAGGCTCAACTTTTTGGGAGACATCTaGGGCAGGGCCACTGGAGGCAGGAGAGTGGGGTGCTGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: CHLSHLERLNFLGDI*GRATGGRRVGCWPL
Trigger: CAGAGGCCAGCACCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp GGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTaGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCT +
Preference number: 1 (lower is better)
Translates to: GASQGLPSSGRPQHL*HINSELGPASFLCP
Trigger: AGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR TCA 90 bp GGGCAGGGTCCAAACAAGAACCCTGGTGCCTCCCGCCCCTCCTGCTaGGCCATGGTGCCACCTAAGCCATCTAGAAAGGCTCAACTTTTT +
Preference number: 1 (lower is better)
Translates to: GQGPNKNPGASRPSC*AMVPPKPSRKAQLF
Trigger: AAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTTGGACCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp GGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTaGAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACC +
Preference number: 1 (lower is better)
Translates to: GQLQTLWGLRPTLSV*SCGSQRFGNVAMVT
Trigger: GGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp GTCCAAACAAGAACCCTGGTGCCTCCCGCCCCTCCTGCTGAGCCATaGTGCCACCTAAGCCATCTAGAAAGGCTCAACTTTTTGGGAGAC +
Preference number: 1 (lower is better)
Translates to: VQTRTLVPPAPPAEP*CHLSHLERLNFLGD
Trigger: GTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp CAAACAAGAACCCTGGTGCCTCCCGCCCCTCCTGCTGAGCCATGGTaGCACCTAAGCCATCTAGAAAGGCTCAACTTTTTGGGAGACATC +
Preference number: 1 (lower is better)
Translates to: QTRTLVPPAPPAEPW*HLSHLERLNFLGDI
Trigger: GATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 90 bp TTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGGCTaGTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGAC +
Preference number: 1 (lower is better)
Translates to: FTVICYRKCLESVLG*FCLEATHLSPRRGD
Trigger: GTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 90 bp GTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTaGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: VIHSHLLQKVPGIGP*LLLPGSNPLKPQER
Trigger: CCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR TCA 90 bp AGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCAGTaGACATTTACAGTCATCACATGCCCTCTAGAACCCAGATCCCCA +
Preference number: 1 (lower is better)
Translates to: RFLHLNTGYHSLPTQ*TFTVITCPLEPRSP
Trigger: TGGGGATCTGGGTTCTAGAGGGCATGTGATGACTGTAAATGTTCACTGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR TCA 90 bp TTCTCATCATATGGAACTGGTAGCAAAGCCAAAGATTTCTGCACTTaGACACTGGATACCACTCCCTACCCACCCAGTGAACATTTACAG +
Preference number: 1 (lower is better)
Translates to: FSSYGTGSKAKDFCT*TLDTTPYPPSEHLQ
Trigger: CTGTAAATGTTCACTGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAGTTCCATATGATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCACCCACCCTCTCAGTCTaGAGCTGTGGCAGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAPTLSV*SCGSQR
Trigger: CCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGG...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAGAAGGCAAAGCTGCCTaGAGTGTCAGTCCCGGAGGC +
Preference number: 2 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAEGKAA*SVSPGG
Trigger: GCCTCCGGGACTGACACTCCAGGCAGCTTTGCCTTC...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 90 bp ACTGGCCAGGCTCCTCTCCTGCCCCGCCCAGCAGCAGCACGGCCCTaGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACA +
Preference number: 2 (lower is better)
Translates to: TGQAPLLPRPAAARP*PFFSALQTGQRGGT
Trigger: TGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTGCTGCTGGGCGGGGCAGGAGAGGAGCCTGGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR TCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAGTTGGCAGGTTGGCCTaGGAATCCCAGGGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGVGRLA*ESQGQL
Trigger: AAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAAC...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGCAGCGTGGGGAGGGTaGGCATGGGACACAAAAGGG +
Preference number: 2 (lower is better)
Translates to: MPGPLLSCTPSCREGFQAAAWGG*AWDTKG
Trigger: CCCTTTTGTGTCCCATGCCCACCCTCCCCACGCTGC...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGCACCCAGGAGACACTaGCTGCAGAAATGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPAPRRH*LQKWGP
Trigger: GGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGAGAGAAGGCAAAGCTaGCTGGAGTGTCAGTCCCGG +
Preference number: 2 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPERRQS*LECQSR
Trigger: CCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATAGTCCCGGAGGCATTTaGCCCTCTCCCCCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GTQETLAAEMGSLILQENSPGGI*PSPPGA
Trigger: GGCCCCCGGGGGAGAGGGGCAAATGCCTCCGGGACT...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGAGAGAAGGCAAAGCTaGCTGGAGTGTCAGTCCCGG +
Preference number: 2 (lower is better)
Translates to: MPGPLLSCTPSCREGFQAERRQS*LECQSR
Trigger: CCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTC...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCACAGAGAAGTCCTTGTaGGGAGCTGAACCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: MPGPLLSCTPSCREGFQATEKSL*GAEPGP
Trigger: TGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGT...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 90 bp CCGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTaGTGGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: PGASQGLPSSGRPQH*WHINSELGPASFLC
Trigger: GCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR TCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCACTTGGCCTCTCTCCTaGCGCCTCACACCATTAAGC +
Preference number: 2 (lower is better)
Translates to: MPGPLLSCTPSCREGFQATWPLS*RLTPLS
Trigger: GCTTAATGGTGTGAGGCGTCAGGAGAGAGGCCAAGT...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACAGTGTGGCTTCGGGACTaGACATCACACACAAGCCCA +
Preference number: 2 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTVWLRD*TSHTSP
Trigger: TGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACAC...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGACCTGCTGAGCCATGGTaGCACCTAAGCCATCTAGAA +
Preference number: 2 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGPAEPW*HLSHLE
Trigger: TTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGG...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGTCCTTGGCTGCTTCTaGCTGGAAGCAACCCACTTA +
Preference number: 2 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPVLGCF*LEATHL
Trigger: TAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGAC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGATCCTCTCACACACTGTaGCTCCAGGTTGGAACCTCA +
Preference number: 2 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGSSHTL*LQVGTS
Trigger: TGAGGTTCCAACCTGGAGCCACAGTGTGTGAGAGGA...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 90 bp CCAGTTCAGGAAGGCCACAACACTTGTGGCACATTAATTCCGAGCTaGGCCCGGCTTCTTTCCTGTGCCCTCTGCCTCTGTGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PVQEGHNTCGTLIPS*ARLLSCALCLCGQG
Trigger: CCCCTGCCCACAGAGGCAGAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCCTGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 90 bp GCTGAGCCATGGTGCCACCTAAGCCATCTAGAAAGGCTCAACTTTTaGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: AEPWCHLSHLERLNF*GDICGRATGGRRVG
Trigger: CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCATGGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp AACACTTGTGGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCTCCACACACAAGCCCACTaGAGCGTGGGGAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: NTCGTLIPSLARLLSCALHTQAH*SVGRVG
Trigger: GCCCACCCTCCCCACGCTGCAGTGGGCTTGTGTGTG...GAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGGCAGGAGAGTGGGGTaGTGGCCTCTGCGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QETLAAEMGSLILQENPLGRRVG*WPLRGR
Trigger: CCTGCCTCGCAGAGGCCAGCACCCCACTCTCCTGCC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCCCAGGAGACACTGGCTaGAGAAATGGGGTCCCTGAT +
Preference number: 2 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCPGDTG*RNGVPD
Trigger: ATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGG...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGGAATCGGTCCTTGGCTaGTTCTGCCTGGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLESVLG*FCLEAT
Trigger: GGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTC...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp TCTGGAAATGACAGGGGAGAGAAGGCAAAGCTGCCTGGAGTGTCAGTCCCGGAGTGGGGAGGGTGGGCATaGGACACAAAAGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: SGNDRGEKAKLPGVSVPEWGGWA*DTKGSG
Trigger: CCCAGACCCTTTTGTGTCCCATGCCCACCCTCCCCA...CTCCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTCCCCTGTCATTTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGGGAAAAGGGAGGGTGTaGCTTCGGGACTGCACATCA +
Preference number: 2 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLGKGRV*LRDCTS
Trigger: TGATGTGCAGTCCCGAAGCCACACCCTCCCTTTTCC...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATGTAGCCATGGTCACCTaGCCATGGCCCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GTQETLAAEMGSLILQENVAMVT*PWPRGR
Trigger: CCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTAC...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGATGGCAGTCAGAGGTTTaGCAATGTAGCCATGGTCAC +
Preference number: 2 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGWQSEV*QCSHGH
Trigger: GTGACCATGGCTACATTGCCAAACCTCTGACTGCCA...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR TCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAAACTGTCCATTCCAGTaGGGAAAAGGGAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSANCPFQ*GKGRVW
Trigger: CCACACCCTCCCTTTTCCTCACTGGAATGGACAGTT...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCGCAAGAAAATCCGCTTaGTGTTGGCAGGTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCARKSA*CWQVGL
Trigger: CAGGCCAACCTGCCAACAGCAAGCGGATTTTCTTGC...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGACAGAGAAGTCCTTGTaGGGAGCTGAACCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLTEKSL*GAEPGP
Trigger: TGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGT...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGACACAAAAGGGTCTaGGGCTGTCTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESGHKRV*GCLQTE
Trigger: CTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCC...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATGGGGAGGGTGGGCATaGGACACAAAAGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKWGGWA*DTKGSG
Trigger: CCCAGACCCTTTTGTGTCCCATGCCCACCCTCCCCA...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGGGAAAAGGGAGGGTGTaGCTTCGGGACTGCACATCA +
Preference number: 2 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLGKGRV*LRDCTS
Trigger: TGATGTGCAGTCCCGAAGCCACACCCTCCCTTTTCC...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR TCA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCCCAGAGTCAGTGCAATaGACTGTCCATTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: GPLGSPSALPAPRSRAEIPESVQ*TVHSSE
Trigger: CTCACTGGAATGGACAGTTCATTGCACTGACTCTGG...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGCTTAGGATCTCCAAGTaGTCTTCCAGCTCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMLRISK*SSSSQE
Trigger: CTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAG...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAAGGCCACAACACTTGTaGCACATTAATTCCGAGCTT +
Preference number: 2 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSARPQHL*HINSEL
Trigger: AAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCT...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR TCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCACCAGAGTCAGTGCAATaGACTGTCCATTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: RKSACCWQVGLRIPGAASPESVQ*TVHSSE
Trigger: CTCACTGGAATGGACAGTTCATTGCACTGACTCTGG...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR TCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTCTTCAGAAGGCAATGTaGCCAGCAAAGGCTCAAACT +
Preference number: 2 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESLQKAM*PAKAQT
Trigger: AGTTTGAGCCTTTGCTGGTCACATTGCCTTCTGAAG...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGAAGGCAAAGCTGCCTaGAGTGTCAGTCCCGGAGGC +
Preference number: 2 (lower is better)
Translates to: LVAKPKISALEHWIPLPTEGKAA*SVSPGG
Trigger: GCCTCCGGGACTGACACTCCAGGCAGCTTTGCCTTC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATAAAGGCTCAACTTTTTaGGAGACATCTGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GTQETLAAEMGSLILQENKGSTF*ETSAAG
Trigger: CCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTT...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCAGCAACAGCCTCAGGCTaGCCAACAGAACAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: AKPKISALEHWIPLPTHPATASG*PTEQAF
Trigger: AAAAGCCTGTTCTGTTGGGCAGCCTGAGGCTGTTGC...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAAACTGTGGCTCCAGGTTaGAACCTCAAGCATAAAGGA +
Preference number: 2 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKTVAPG*NLKHKG
Trigger: TCCTTTATGCTTGAGGTTCCAACCTGGAGCCACAGT...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCATCCTCTCACACACTGTaGCTCCAGGTTGGAACCTCA +
Preference number: 2 (lower is better)
Translates to: AKPKISALEHWIPLPTHPSSHTL*LQVGTS
Trigger: TGAGGTTCCAACCTGGAGCCACAGTGTGTGAGAGGA...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGAGATCCCAGAGTCAGTaGAATGAACTGTCCATTCCA +
Preference number: 2 (lower is better)
Translates to: TQETLAAEMGSLILQENPRSQSQ*NELSIP
Trigger: TGGAATGGACAGTTCATTGCACTGACTCTGGGATCT...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGCAACAGCCTCAGGCTaGCCAACAGAACAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: LVAKPKISALEHWIPLPTATASG*PTEQAF
Trigger: AAAAGCCTGTTCTGTTGGGCAGCCTGAGGCTGTTGC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 90 bp CAGACTGCTAGAAGAAGGGCAAGAGAAGTCGTAATTCACAGTCATTaGCTACAGAAAGTGCCTGGAATCGGTCCTTGGCTGCTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: QTARRRAREVVIHSH*LQKVPGIGPWLLLP
Trigger: AGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCTTGCCCTTCTTCTAGCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR GCA 90 bp ACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAATGCACACACAAGCCCACTaGAGCGTGGGGAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TKIKRIYNLILPPLQKAMHTQAH*SVGRVG
Trigger: GCCCACCCTCCCCACGCTGCAGTGGGCTTGTGTGTG...CATTGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp GGCCATGGCCCAGGGGCAGGGTCCAAACAAGAACCCTaGTGCCTCCCGCCCCTCCTGCTGAGCCATGGTGCC +
Preference number: 3 (lower is better)
Translates to: GHGPGAGSKQEP*CLPPLLLSHGA
Trigger: GGCACCATGGCTCAGCAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTTGGACCCTGCCCCTGGGCCATGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp CCGGTTGCTTCTCCGCGCCTGCACGGGTATTTAATGTaGCACACTGGCCAGGCTCCTCTCCTGCCCCGCCCA +
Preference number: 3 (lower is better)
Translates to: PVASPRLHGYLM*HTGQAPLLPRP
Trigger: TGGGCGGGGCAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGAAGCAACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTaGTTCTCCGCGCCTGCACGGGTATTTAATGTGGCA +
Preference number: 3 (lower is better)
Translates to: AGRAFRPEGGAG*FSAPARVFNVA
Trigger: TGCCACATTAAATACCCGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp AGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTaGGGAGCTGAACCGGGCCCAGGTCCTGCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RVWGCLQTEKSL*GAEPGPGPAQE
Trigger: CTCCTGAGCAGGACCTGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGGGCAGCTTCAGACATaGTGGGGACTCAGACCCACC +
Preference number: 3 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPGQLQT*WGLRPT
Trigger: GGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp GGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGCCTGGAATCGGTCCTaGGCTGCTTCTGCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: GLFSPAHLLAGRAFRPEGAWNRS*AASAWK
Trigger: CTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGC...CCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp CCGCCCAGCAGCAGCACGGCCCTTGCCTTTCTTCAGTaGCCTCCAAACTGGTCAGAGAGGAGGCACAGACTG +
Preference number: 3 (lower is better)
Translates to: PPSSSTALAFLQ*PPNWSERRHRL
Trigger: CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTGCTGCTGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp AGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTaGACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGA +
Preference number: 3 (lower is better)
Translates to: RTQIPMPGPLLS*TPSCREGFQAG
Trigger: TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCACAGACAGAGAAGTCCTaGTGGGGAGCTGAACCGGGC +
Preference number: 3 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSAQTEKS*WGAEPG
Trigger: GCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTG...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCCAGACAGAGAAGTCCTaGTGGGGAGCTGAACCGGGC +
Preference number: 3 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCQTEKS*WGAEPG
Trigger: GCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTG...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp GGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTaGCCATGGCCCAGGGGCAGGGTCCAAACAAGAACC +
Preference number: 3 (lower is better)
Translates to: GSQRFGNVAMVT*PWPRGRVQTRT
Trigger: GGTTCTTGTTTGGACCCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp CACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTTaGCAATGTAGCCATGGTCACCTGGCCATGGCCCAG +
Preference number: 3 (lower is better)
Translates to: HPLSLQLWQSEV*QCSHGHLAMAQ
Trigger: CTGGGCCATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGGAAGGGGGTGCCGGTaGCTTCTCCGCGCCTGCACG +
Preference number: 3 (lower is better)
Translates to: LVAKPKISALEHWIPLPTGRGCR*LLRACT
Trigger: CGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp ACCCTGGTGCCTCCCGCCCCTCCTGCTGAGCCATGGTaGCACCTAAGCCATCTAGAAAGGCTCAACTTTTTG +
Preference number: 3 (lower is better)
Translates to: TLVPPAPPAEPW*HLSHLERLNFL
Trigger: CAAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGAGGCACCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp AGAACCCTGGTGCCTCCCGCCCCTCCTGCTGAGCCATaGTGCCACCTAAGCCATCTAGAAAGGCTCAACTTT +
Preference number: 3 (lower is better)
Translates to: RTLVPPAPPAEP*CHLSHLERLNF
Trigger: AAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGAGGCACCAGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp CAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTaGAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCC +
Preference number: 3 (lower is better)
Translates to: QTLWGLRPTLSV*SCGSQRFGNVA
Trigger: GGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp ACAGTCATCACATGCCCTCTAGAACCCAGATCCCCATaGCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCA +
Preference number: 3 (lower is better)
Translates to: TVITCPLEPRSP*RGLFSPAHLLA
Trigger: TGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp GGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGACCCTGACTTTCACATaGATGGGTGAATGGCAAGTA +
Preference number: 3 (lower is better)
Translates to: GLFSPAHLLAGRAFRPEGTLTFT*MGEWQV
Trigger: TACTTGCCATTCACCCATCAATGTGAAAGTCAGGGT...CCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGGAAAGGCTCAACTTTTaGGGAGACATCTGCGGCAGG +
Preference number: 3 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLERLNF*GDICGR
Trigger: CCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTC...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR TCA 72 bp GCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTaGTCTTGCAAGAAAATCCGCTTGCTGTTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: APRRHWLQKWGP*SCKKIRLLLAG
Trigger: ACCTGCCAACAGCAAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGACATTAATTCCGAGCTaGGCCCGGCTTCTTTCCTGT +
Preference number: 3 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLTLIPS*ARLLSC
Trigger: ACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGT...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGAAGGCCACAACACTaGTGGCACATTAATTCCGAG +
Preference number: 3 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESGRPQH*WHINSE
Trigger: CTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCC...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR GCA 72 bp ATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGGCTaGTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: ICYRKCLESVLG*FCLEATHLSPR
Trigger: CCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp CAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTaGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: QGLPSSGRPQHL*HINSELGPASF
Trigger: GAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CCA 72 bp AGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTaGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCC +
Preference number: 3 (lower is better)
Translates to: SHLLQKVPGIGP*LLLPGSNPLKP
Trigger: GGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp AGCCATCTAGAAAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGAAGGCCACAACACTaGTGGCACATTAATTCCGAG +
Preference number: 3 (lower is better)
Translates to: SHLERLNFLGDICGRATGGRPQH*WHINSE
Trigger: CTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCC...TCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR TCA 72 bp CACTTGAACACTGGATACCACTCCCTACCCACCCAGTaGACATTTACAGTCATCACATGCCCTCTAGAACCC +
Preference number: 3 (lower is better)
Translates to: HLNTGYHSLPTQ*TFTVITCPLEP
Trigger: GGGTTCTAGAGGGCATGTGATGACTGTAAATGTTCACTGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCAAAATCCGCTTGCTGTaGGCAGGTTGGCCTGAGAAT +
Preference number: 3 (lower is better)
Translates to: LVAKPKISALEHWIPLPTKIRLL*AGWPEN
Trigger: ATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTT...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR TCA 72 bp TATGGAACTGGTAGCAAAGCCAAAGATTTCTGCACTTaGACACTGGATACCACTCCCTACCCACCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: YGTGSKAKDFCT*TLDTTPYPPSE
Trigger: TTCACTGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAGTTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR-3UTR CAA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGACCCTGACTTTCACATaGATGGGTGAATGGCAAGTA +
Preference number: 3 (lower is better)
Translates to: RSRNSQSFATESAWNRSLTLTFT*MGEWQV
Trigger: TACTTGCCATTCACCCATCAATGTGAAAGTCAGGGT...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAGCAGAGCGGCTTGCATaGGCGCCTCCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAAERLA*APPGAA
Trigger: TGCTGCTCCTGGAGGCGCGCATGCAAGCCGCTCTGC...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAAGGAGAGTGGGGTGCTaGCCTCTGCGAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPARRVGC*PLRGRC
Trigger: GCACCTGCCTCGCAGAGGCCAGCACCCCACTCTCCT...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCACTCTCCTGCAGCTGCTaGATGCGCTCCATCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPALSCSC*MRSISA
Trigger: GGCGCTGATGGAGCGCATGCAGCAGCTGCAGGAGAG...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACAAGTCCCGGAGGCATTTaGCCCTCTCCCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTSPGGI*PSPPGA
Trigger: GGCCCCCGGGGGAGAGGGGCAAATGCCTCCGGGACT...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCCGGAAGGTAGGGGGTaGCTGAGCCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPPEGRG*LSPSPS
Trigger: ACTCGGAGAGGGGCTCAGGCACCCCCTACCTTCCGG...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGGAAGGGGGTGCCGGTTaGTTCTCCGCGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVEGGAG*FSAPAR
Trigger: CCGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTC...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAGGATATAGTTCCAGATaGCCCTGCGGAGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAGYSSR*PCGARR
Trigger: CCTCCGTGCTCCGCAGGGCCATCTGGAACTATATCC...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGTAGCCATGGTCACCTaGCCATGGCCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPVAMVT*PWPRGR
Trigger: CCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTAC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCACCGCAGGTAGTCCTTaGGCTCTGCGCGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: MPGPLLSCTPSCREGFQATAGSP*ALRGTR
Trigger: CCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGT...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGGCGGGCGGCAGCCATaGTGGCAATGTAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSAGGRQP*WQCSGA
Trigger: GGCGCCACTACATTGCCATCATGGCTGCCGCCCGCC...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGGACCAGAGCCTGAATaGGCTCGGCCAGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPGPEPE*ARPGTK
Trigger: CTTGGTCCCTGGCCGAGCTCATTCAGGCTCTGGTCC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGCAGGACCAGAGCCTaGATGAGCTCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGSRTRA*MSSARD
Trigger: GTCCCTGGCCGAGCTCATTCAGGCTCTGGTCCTGCT...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGCCCGGCTCTCCCTCTaGTCCTCTCCGGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESARLSL*SSPGPE
Trigger: CTCGGGCCCCGGAGAGGAGCAGAGGGAGAGCCGGGC...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGTCCAGCCCCAGGTGCTaGTCGAGGCTCTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLSSPRC*SRLSAP
Trigger: GGGGGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGA...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCAGTCCCGGAGGCATTTaGCCCTCTCCCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GPLGSPSALPAPRSRAEISPGGI*PSPPGA
Trigger: GGCCCCCGGGGGAGAGGGGCAAATGCCTCCGGGACT...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACAAGTCCGCCACGATCATaGTGCGCGCCAGGACCCGGT +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTSPPRS*CAPGPG
Trigger: ACCGGGTCCTGGCGCGCACCATGATCGTGGCGGACT...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCACTTGGTGATGAGCCATaGCCGATGCGCCAGCAACTT +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPALGDEP*PMRQQL
Trigger: AAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAG...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAGAGAGCGAGTGGCAGTaGGTGAGCAGGACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGESEWQ*VSRTRA
Trigger: GGCTCTGGTCCTGCTCACCCACTGCCACTCGCTCTC...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAAGCAGCAAGTTCACGTaGACCTTCTCTGAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPASSKFT*TFSEWR
Trigger: CCGCCACTCAGAGAAGGTCCACGTGAACTTGCTGCT...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGCTGGAGGCAGGAGAGTaGGGTGCTGGCCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVLEAGE*GAGLCE
Trigger: CTCGCAGAGGCCAGCACCCCACTCTCCTGCCTCCAG...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAGGAGGGACGCCCGAATaGAGCCGGGACTGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASGGTPE*SRDWAP
Trigger: CGGCGCCCAGTCCCGGCTTCATTCGGGCGTCCCTCC...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGACCAGAGCCTGAATaGGCTCGGCCAGGGACCAAG +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEGPEPE*ARPGTK
Trigger: CTTGGTCCCTGGCCGAGCTCATTCAGGCTCTGGTCC...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TCTGGAAATGACAGGGGAGAGAAGGCAAAGCTGCCTGGAGTGTCAGTCCCGGAGCCGCCACGATCATGGTaGGCGCCAGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGNDRGEKAKLPGVSVPEPPRSW*APGPGR
Trigger: GCGACCGGGTCCTGGCGCGCACCATGATCGTGGCGG...CTCCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTCCCCTGTCATTTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGTCCAGCCCCAGGTGCTaGTCGAGGCTCTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMSSPRC*SRLSAP
Trigger: GGGGGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGA...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGCACACACAAGCCCACTaGAGCGTGGGGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLHTQAH*SVGRVG
Trigger: GCCCACCCTCCCCACGCTGCAGTGGGCTTGTGTGTG...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAGCAAGAAAATCCGCTTaGTGTTGGCAGGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAARKSA*CWQVGL
Trigger: CAGGCCAACCTGCCAACAGCAAGCGGATTTTCTTGC...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGAGTGGCGCCAGGAGCTaGCCAAGGGACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGESGARS*PRDHPC
Trigger: ACACGGATGGTCCCTTGGCCAGCTCCTGGCGCCACT...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACAGCAGCGTGGGGAGGGTaGGCATGGGACACAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTAAWGG*AWDTKG
Trigger: CCCTTTTGTGTCCCATGCCCACCCTCCCCACGCTGC...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGCGGGCGGCAGCCATaGTGGCAATGTAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESGGRQP*WQCSGA
Trigger: GGCGCCACTACATTGCCATCATGGCTGCCGCCCGCC...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCAAGGTAGGGGGTGCCTaGGCCCCTCTCCGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCKVGGA*APLRVK
Trigger: CTTCACTCGGAGAGGGGCTCAGGCACCCCCTACCTT...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCAGGTCATGTAGCGGGTaGTGGCACGGAGGGCGTACA +
Preference number: 4 (lower is better)
Translates to: MPGPLLSCTPSCREGFQARSCSG*WHGGRT
Trigger: TGTACGCCCTCCGTGCCATCACCCGCTACATGACCT...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATGCCCGGCTCTCCCTCTaGTCCTCTCCGGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENARLSL*SSPGPE
Trigger: CTCGGGCCCCGGAGAGGAGCAGAGGGAGAGCCGGGC...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGCCTCCAGCCCCAGGTaGTGCTCGAGGCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESASSPR*CSRLSA
Trigger: GGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGAGGC...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGCCTCCAGCCCCAGGTaGTGCTCGAGGCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVASSPR*CSRLSA
Trigger: GGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGAGGC...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGGCAGGGCTGCCATCTaGATCCCCCTCAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSAGRAAI*IPLRED
Trigger: ATCCTCCCTGAGGGGGATGCAGATGGCAGCCCTGCC...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCACTCTCCTGCAGCTGCTaGATGCGCTCCATCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSALSCSC*MRSISA
Trigger: GGCGCTGATGGAGCGCATGCAGCAGCTGCAGGAGAG...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCAGTTCCAGATGGCCCTaGGGAGCACGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: MPGPLLSCTPSCREGFQASSRWP*GARRCP
Trigger: TGGACACCTCCGTGCTCCGCAGGGCCATCTGGAACT...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGTACAGCAGAGCGGCTTaGATGCGCGCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LNFLGDICGRATGGRRVGYSRAA*MRASRS
Trigger: GCTCCTGGAGGCGCGCATGCAAGCCGCTCTGCTGTA...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGCAGGAGAGTGGGGTaGTGGCCTCTGCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVGRRVG*WPLRGR
Trigger: CCTGCCTCGCAGAGGCCAGCACCCCACTCTCCTGCC...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGCCCACCCTCTCAGTCTaGAGCTGTGGCAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVPTLSV*SCGSQR
Trigger: CCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGG...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGCAGCAGCACGGCCCTTaGCTTTCTTCAGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVQQHGP*LSSVPS
Trigger: GGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTGCTG...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGCAGCAGCACGGCCCTTaGCTTTCTTCAGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEQQHGP*LSSVPS
Trigger: GGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTGCTG...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGACCCGTGCACCCGAGTaGGTTTCGGAGGGACGCCCG +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVTRAPE*VSEGRP
Trigger: CGGGCGTCCCTCCGAAACCCACTCGGGTGCACGGGT...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TCTGGAAATGACAGGGGAGAGAAGGCAAAGCTGCCTGGAGTGTCAGTCCCGGAGGGGGGTGTAGGTGCCTaGGGGGCAGGGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SGNDRGEKAKLPGVSVPEGGVGA*GAGLPS
Trigger: AGATGGCAGCCCTGCCCCCCAGGCACCTACACCCCC...CTCCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTCCCCTGTCATTTCCAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGGAAGGCAAAGCTGCCTaGAGTGTCAGTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVEGKAA*SVSPGG
Trigger: GCCTCCGGGACTGACACTCCAGGCAGCTTTGCCTTC...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGACCGCAGGTAGTCCTTaGGCTCTGCGCGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMTAGSP*ALRGTR
Trigger: CCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGT...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAGAGCCCCTCTCCGAGTaGAGTCCTCATATCCGAAAG +
Preference number: 4 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGEPLSE*SPHIRK
Trigger: CTTTCGGATATGAGGACTTCACTCGGAGAGGGGCTC...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTTCCCGCCCCTCCTGCTaGGCCATGGTGCCACCTAAG +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESSRPSC*AMVPPK
Trigger: CTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGA...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGTCCCGCCCCTCCTGCTaGGCCATGGTGCCACCTAAG +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLSRPSC*AMVPPK
Trigger: CTTAGGTGGCACCATGGCTCAGCAGGAGGGGCGGGA...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGCCCCCTCAGGGAGGATaGCACAGCCAAACACGAAGG +
Preference number: 4 (lower is better)
Translates to: LNFLGDICGRATGGRRVGPPQGG*HSQTRR
Trigger: CCTTCGTGTTTGGCTGTGGCATCCTCCCTGAGGGGG...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGCGCAGCAGGCTCTCCTaGAGCTGCTGCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLRSRLS*SCCMRS
Trigger: GGAGCGCATGCAGCAGCTGCAGGAGAGCCTGCTGCG...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTCCGGAAGGTAGGGGGTaGCTGAGCCCCTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESPEGRG*LSPSPS
Trigger: ACTCGGAGAGGGGCTCAGGCACCCCCTACCTTCCGG...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGGCAGAGCGGCTTGCATaGGCGCCTCCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLAERLA*APPGAA
Trigger: TGCTGCTCCTGGAGGCGCGCATGCAAGCCGCTCTGC...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGACCGGGCCCAGGTCCTaGTCAGGAGTCAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LNFLGDICGRATGGRRVGTGPRS*SGVRSC
Trigger: ACATGACCTGACTCCTGAGCAGGACCTGGGCCCGGT...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCAAACAAGAACCCTGGTaGCTCCCGCCCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCKQEPW*LPPLLL
Trigger: CAGCAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTT...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGAATCGGTCCTTGGCTaGTTCTGCCTGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPESVLG*FCLEAT
Trigger: GGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAGAAGGGGGTGCCGGTTaGTTCTCCGCGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASEGGAG*FSAPAR
Trigger: CCGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTC...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCAGGCCGGAAGGGGGTaGCGGTTGCTTCTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENQAGRG*RLLLRA
Trigger: GGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTG...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGAGTGGCGCCAGGAGCTaGCCAAGGGACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRSGARS*PRDHPC
Trigger: ACACGGATGGTCCCTTGGCCAGCTCCTGGCGCCACT...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGCTCTCCATCTCCTCCTaGGACGTCCCCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMLSISS*DVPSSR
Trigger: GCGGGATGAGGGGACGTCCCAGGAGGAGATGGAGAG...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACACAGCATGTCTGGGTGTaGAGAGGGCTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTQHVWV*RGLQDV
Trigger: GACATCCTGGAGCCCTCTCCACACCCAGACATGCTG...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGTGGGGAGGGTGGGCATaGGACACAAAAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LNFLGDICGRATGGRRVGWGGWA*DTKGSG
Trigger: CCCAGACCCTTTTGTGTCCCATGCCCACCCTCCCCA...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGGAAAAGGGAGGGTGTaGCTTCGGGACTGCACATCA +
Preference number: 4 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPGKGRV*LRDCTS
Trigger: TGATGTGCAGTCCCGAAGCCACACCCTCCCTTTTCC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TCTGGAAATGACAGGGGAGAGAAGGCAAAGCTGCCTGGAGTGTCAGTCCCGGAGAGGAGAGTGGGGTGCTaGCCTCTGCGAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SGNDRGEKAKLPGVSVPERRVGC*PLRGRC
Trigger: GCACCTGCCTCGCAGAGGCCAGCACCCCACTCTCCT...CTCCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTCCCCTGTCATTTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGTAGCCATGGTCACCTaGCCATGGCCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVVAMVT*PWPRGR
Trigger: CCTGCCCCTGGGCCATGGCCAGGTGACCATGGCTAC...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGATACTGGGATGGGGGTaGGAGTCCTCAGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEILGWG*ESSEGT
Trigger: GGTGCCTTCTGAGGACTCCCACCCCCATCCCAGTAT...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGAGCAGGACCAGAGCCTaGATGAGCTCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMSRTRA*MSSARD
Trigger: GTCCCTGGCCGAGCTCATTCAGGCTCTGGTCCTGCT...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCGAACGGCCGCTTTGGTaGTGGACTCTTCCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GPLGSPSALPAPRSRAEIERPLW*WTLPPV
Trigger: GACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTC...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGGAACGGCCGCTTTGGTaGTGGACTCTTCCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMERPLW*WTLPPV
Trigger: GACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTC...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTGTAGTCCTTGAGCTCTaGGCGGCACTCGGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: IVGTQTHPLSLQLWQSEVVVLEL*AALGVR
Trigger: GCGGACTCCGAGTGCCGCGCAGAGCTCAAGGACTAC...AACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGCAGGCCCATCACCACTaGCAGGTTGTCTACTCGCCC +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRQAHHH*QVVYSP
Trigger: GGGCGAGTAGACAACCTGGCAGTGGTGATGGGCCTG...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGGGTCACCACCAGTCTaGAGAAACTCGGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSAGSPPV*RNSAMW
Trigger: CCACATGGCCGAGTTTCTGCAGACTGGTGGTGACCC...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGAGGCTCTCCTGCAGCTaGTGCATGCGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRRLSCS*CMRSIS
Trigger: GCTGATGGAGCGCATGCAGCAGCTGCAGGAGAGCCT...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCACGCAGCAGGCTCTCCTaGAGCTGCTGCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASRSRLS*SCCMRS
Trigger: GGAGCGCATGCAGCAGCTGCAGGAGAGCCTGCTGCG...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAGGTGAGGCTATAGGCTaGCTGGAACTTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGGEAIG*LELLIQ
Trigger: CTGGATGAGAAGTTCCAGGCAGCCTATAGCCTCACC...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGTACAGCAGAGCGGCTTaGATGCGCGCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLYSRAA*MRASRS
Trigger: GCTCCTGGAGGCGCGCATGCAAGCCGCTCTGCTGTA...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGGGCAGGAGAGTGGGGTaGTGGCCTCTGCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQETLAAEMGSLILQENPGRRVG*WPLRGR
Trigger: CCTGCCTCGCAGAGGCCAGCACCCCACTCTCCTGCC...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGCCCACCCTCTCAGTCTaGAGCTGTGGCAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMPTLSV*SCGSQR
Trigger: CCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGG...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGCCAGGAGACACTGGCTaGAGAAATGGGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEPGDTG*RNGVPD
Trigger: ATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGG...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGCCAGGAGACACTGGCTaGAGAAATGGGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVPGDTG*RNGVPD
Trigger: ATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGG...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGTCCTGCACACCTTCTTaGAGGGAGGGCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLSCTPS*REGFQA
Trigger: GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGA...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCTCCTGCACACCTTCTTaGAGGGAGGGCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCSCTPS*REGFQA
Trigger: GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGA...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGGAGAGCGAGTGGCAGTaGGTGAGCAGGACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMESEWQ*VSRTRA
Trigger: GGCTCTGGTCCTGCTCACCCACTGCCACTCGCTCTC...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGCTCTCCATCTCCTCCTaGGACGTCCCCTCATCCCGC +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLLSISS*DVPSSR
Trigger: GCGGGATGAGGGGACGTCCCAGGAGGAGATGGAGAG...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACATCGGGTGGTCTTCTCTaGGTAGCAGGCCACTGTCTT +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTSGGLL*VAGHCL
Trigger: AAGACAGTGGCCTGCTACCCAGAGAAGACCACCCGA...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGTGGACCTTCTCTGAGTaGCGGAAGTGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEWTFSE*RKCLQK
Trigger: CTTCTGGAGGCACTTCCGCCACTCAGAGAAGGTCCA...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACAGGACAGATGAGATACTaGGATGGGGGTGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTGQMRY*DGGGSP
Trigger: AGGACTCCCACCCCCATCCCAGTATCTCATCTGTCC...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGGAGGGACGCCCGAATaGAGCCGGGACTGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTGGTPE*SRDWAP
Trigger: CGGCGCCCAGTCCCGGCTTCATTCGGGCGTCCCTCC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCACCTCCTCCACGGGGATaGAGGCGCTGGGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPPPPRG*RRWALE
Trigger: CTCGAGGGCCCAGCGCCTTCATCCCCGTGGAGGAGG...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGCCATCTAGAAAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGACTCGCCGACGACCCGTaGACCCGAGTGGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: SHLERLNFLGDICGRATGLADDP*TRVGFG
Trigger: TCCGAAACCCACTCGGGTGCACGGGTCGTCGGCGAG...TCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTAGGCTCTCCTGCAGCTaGTGCATGCGCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: IVGTQTHPLSLQLWQSEVRLSCS*CMRSIS
Trigger: GCTGATGGAGCGCATGCAGCAGCTGCAGGAGAGCCT...AACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGACTTGCCTTTCTTCAGTaGCCTCCAAACTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PGPLLSCTPSCREGFQAGLAFLQ*PPNWSE
Trigger: CTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAG...TCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGGGGCCTCTTCTCTCCTaGACACCTTCTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMGPLLS*TPSCRE
Trigger: CTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCC...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTGAACCCAGATCCCCATaGCGGGGCCTCTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IVGTQTHPLSLQLWQSEVEPRSP*RGLFSP
Trigger: AGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTC...AACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGAACCCAGATCCCCATaGCGGGGCCTCTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVEPRSP*RGLFSP
Trigger: AGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTC...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTACCCGTGCACCCGAGTaGGTTTCGGAGGGACGCCCG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLTRAPE*VSEGRP
Trigger: CGGGCGTCCCTCCGAAACCCACTCGGGTGCACGGGT...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCACTTGGTGATGAGCCATaGCCGATGCGCCAGCAACTT +
Preference number: 4 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSALGDEP*PMRQQL
Trigger: AAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAG...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp ATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTTCCAAACAAGAACCCTaGTGCCTCCCGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IVGTQTHPLSLQLWQSEVSKQEP*CLPPLL
Trigger: CAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTTGGA...AACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGATGAGATACTGGGATaGGGGTGGGAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEDEILG*GWESSE
Trigger: TTCTGAGGACTCCCACCCCCATCCCAGTATCTCATC...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCATTTAATGTGGCACACTaGCCAGGCTCCTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSAFNVAH*PGSSPA
Trigger: GGCAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAA...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCCGATGGTATTGTAGGTaGGGCTATAGGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCRWYCR*GYRLPG
Trigger: TCCAGGCAGCCTATAGCCTCACCTACAATACCATCG...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGAACTGTCCATTCCAGTaGGGAAAAGGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLNCPFQ*GKGRVW
Trigger: CCACACCCTCCCTTTTCCTCACTGGAATGGACAGTT...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGCCAGAGTCAGTGCAATaGACTGTCCATTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVPESVQ*TVHSSE
Trigger: CTCACTGGAATGGACAGTTCATTGCACTGACTCTGG...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGCAGAAATGGGGTCCCTaGTCTTGCAAGAAAATCCGC +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGEQKWGP*SCKKIR
Trigger: GCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTG...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGTCACCACCAGTCTaGAGAAACTCGGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVGSPPV*RNSAMW
Trigger: CCACATGGCCGAGTTTCTGCAGACTGGTGGTGACCC...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCCCTGCTGAGCCATGGTaGCACCTAAGCCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCPAEPW*HLSHLE
Trigger: TTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGG...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAAAGGAGGAGAGCGAGTaGCAGTGGGTGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASKEESE*QWVSRT
Trigger: GGTCCTGCTCACCCACTGCCACTCGCTCTCCTCCTT...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGGTGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGTGTACATTCTTCGGGTaGTCTTCTCTGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVWLRDCTSHTSPLQRGECTFFG*SSLGSR
Trigger: CCTGCTACCCAGAGAAGACCACCCGAAGAATGTACA...CTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAGAAGGCAAAGCTGCCTaGAGTGTCAGTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASEGKAA*SVSPGG
Trigger: GCCTCCGGGACTGACACTCCAGGCAGCTTTGCCTTC...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTATACTGGGATGGGGGTaGGAGTCCTCAGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESILGWG*ESSEGT
Trigger: GGTGCCTTCTGAGGACTCCCACCCCCATCCCAGTAT...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGGCTACAGAAAGTGCCTaGAATCGGTCCTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LNFLGDICGRATGGRRVGATESA*NRSLAA
Trigger: AGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGC...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGTTTAATGTGGCACACTaGCCAGGCTCCTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRFNVAH*PGSSPA
Trigger: GGCAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAA...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGTCTGCACTTGAACACTaGATACCACTCCCTACCCAC +
Preference number: 4 (lower is better)
Translates to: GLFSPAHLLAGRAFRPEGSALEH*IPLPTH
Trigger: GTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGA...CCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGGAGCCCCTCTCCGAGTaGAGTCCTCATATCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLEPLSE*SPHIRK
Trigger: CTTTCGGATATGAGGACTTCACTCGGAGAGGGGCTC...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATAGGTCATGTAGCGGGTaGTGGCACGGAGGGCGTACA +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENRSCSG*WHGGRT
Trigger: TGTACGCCCTCCGTGCCATCACCCGCTACATGACCT...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCAACTGTCCATTCCAGTaGGGAAAAGGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPLGSPSALPAPRSRAEINCPFQ*GKGRVW
Trigger: CCACACCCTCCCTTTTCCTCACTGGAATGGACAGTT...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGACTTGGCCTCTCTCCTaGCGCCTCACACCATTAAGC +
Preference number: 4 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVTWPLS*RLTPLS
Trigger: GCTTAATGGTGTGAGGCGTCAGGAGAGAGGCCAAGT...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACATCCCTACCCACCCAGTaGACATTTACAGTCATCACA +
Preference number: 4 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTSLPTQ*TFTVIT
Trigger: TGTGATGACTGTAAATGTTCACTGGGTGGGTAGGGA...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTCCCAGAGGACATCAGTaGCTCCAGCCCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLPRGHQ*LQPQVL
Trigger: CAGCACCTGGGGCTGGAGGCACTGATGTCCTCTGGG...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCCCCTCAGGGAGGATaGCACAGCCAAACACGAAGG +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENPPQGG*HSQTRR
Trigger: CCTTCGTGTTTGGCTGTGGCATCCTCCCTGAGGGGG...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGTCTGAGTGGCGGAAGTaGCTCCAGAAGAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMSEWRK*LQKRLY
Trigger: GTACAACCTCTTCTGGAGGCACTTCCGCCACTCAGA...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGACCGGGCCCAGGTCCTaGTCAGGAGTCAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: TQETLAAEMGSLILQENPTGPRS*SGVRSC
Trigger: ACATGACCTGACTCCTGAGCAGGACCTGGGCCCGGT...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGGTGTGGCTTCGGGACTaGACATCACACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLVWLRD*TSHTSP
Trigger: TGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACAC...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGGAATCGGTCCTTGGCTaGTTCTGCCTGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMESVLG*FCLEAT
Trigger: GGTTGCTTCCAGGCAGAAGCAGCCAAGGACCGATTC...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAACGAGAACGGCCGCTTTaGTGCTGGACTCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKRERPL*CWTLPP
Trigger: TGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCG...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGTCGGGTGGTCTTCTCTaGGTAGCAGGCCACTGTCTT +
Preference number: 4 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLSGGLL*VAGHCL
Trigger: AAGACAGTGGCCTGCTACCCAGAGAAGACCACCCGA...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTTGGACCTTCTCTGAGTaGCGGAAGTGCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESWTFSE*RKCLQK
Trigger: CTTCTGGAGGCACTTCCGCCACTCAGAGAAGGTCCA...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGGGACACAAAAGGGTCTaGGGCTGTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMGHKRV*GCLQTE
Trigger: CTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCC...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AACACTTGTGGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCTCTGGGGAGGGTGGGCATaGGACACAAAAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTCGTLIPSLARLLSCALWGGWA*DTKGSG
Trigger: CCCAGACCCTTTTGTGTCCCATGCCCACCCTCCCCA...GAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATTCCAAACAAGAACCCTaGTGCCTCCCGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENSKQEP*CLPPLL
Trigger: CAGGAGGGGCGGGAGGCACCAGGGTTCTTGTTTGGA...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TCTCCGCGCCTGCACGGGTATTTAATGTGGCACACTGGCCAGGCTCCTCTCCTGTGGCAGTCAGAGGTTTaGCAATGTAGCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: SPRLHGYLMWHTGQAPLLWQSEV*QCSHGH
Trigger: GTGACCATGGCTACATTGCCAAACCTCTGACTGCCA...CAGGAGAGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTGCAGGCGCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 72 bp TGGTGCCACCTAAGCCATCTAGAAAGGCTCAACTTTTaGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WCHLSHLERLNF*GDICGRATGGR
Trigger: CCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCTTAGGTGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGCCAGAGTCAGTGCAATaGACTGTCCATTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMPESVQ*TVHSSE
Trigger: CTCACTGGAATGGACAGTTCATTGCACTGACTCTGG...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGCAGAAATGGGGTCCCTaGTCTTGCAAGAAAATCCGC +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRQKWGP*SCKKIR
Trigger: GCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTG...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCTCGCCGACGACCCGTaGACCCGAGTGGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTLADDP*TRVGFG
Trigger: TCCGAAACCCACTCGGGTGCACGGGTCGTCGGCGAG...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCACCCAGAGGACATCAGTaGCTCCAGCCCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPPRGHQ*LQPQVL
Trigger: CAGCACCTGGGGCTGGAGGCACTGATGTCCTCTGGG...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGCCAGGGACCAAGTGTaGTCGCCGGTCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLARDQV*SPVFSK
Trigger: CTTGCTGAAGACCGGCGAGCACACTTGGTCCCTGGC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTTCTGAGTGGCGGAAGTaGCTCCAGAAGAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESSEWRK*LQKRLY
Trigger: GTACAACCTCTTCTGGAGGCACTTCCGCCACTCAGA...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACACACAAGCCCACTaGAGCGTGGGGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTHTQAH*SVGRVG
Trigger: GCCCACCCTCCCCACGCTGCAGTGGGCTTGTGTGTG...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATGAGAGAAGGCAAAGCTaGCTGGAGTGTCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENERRQS*LECQSR
Trigger: CCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTC...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAGCTGTGGCAGTCAGAGGTTGCAACAGCCTCAGGCTaGCCAACAGAACAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: IVGTQTHPLSLQLWQSEVATASG*PTEQAF
Trigger: AAAAGCCTGTTCTGTTGGGCAGCCTGAGGCTGTTGC...AACCTCTGACTGCCACAGCTGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAAGGGCCTCTTCTCTCCTaGACACCTTCTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKGPLLS*TPSCRE
Trigger: CTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCC...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGTTTACAGTCATCACATaGCCTCTAGAACCCAGATCC +
Preference number: 4 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVFTVIT*PLEPRS
Trigger: GGATCTGGGTTCTAGAGGGCATGTGATGACTGTAAA...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCGGCCGCTTTGGTGCTaGACTCTTCCCCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTRPLWC*TLPPVG
Trigger: CCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCG...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGTGTACATTCTTCGGGTaGTCTTCTCTGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRCTFFG*SSLGSR
Trigger: CCTGCTACCCAGAGAAGACCACCCGAAGAATGTACA...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAAACAGAGAAGTCCTTGTaGGGAGCTGAACCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKTEKSL*GAEPGP
Trigger: TGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGT...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AACACTTGTGGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCTCACAGAGAAGTCCTTGTaGGGAGCTGAACCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: NTCGTLIPSLARLLSCALTEKSL*GAEPGP
Trigger: TGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGT...GAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGCACCCAGGAGACACTaGCTGCAGAAATGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLAPRRH*LQKWGP
Trigger: GGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGCCATCTAGAAAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGACCTGGAATCGGTCCTTaGCTGCTTCTGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SHLERLNFLGDICGRATGPGIGP*LLLPGS
Trigger: GCTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGG...TCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTCTAGATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TCTGGAAATGACAGGGGAGAGAAGGCAAAGCTGCCTGGAGTGTCAGTCCCGGAGCACGGGTATTTAATGTaGCACACTGGCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGNDRGEKAKLPGVSVPEHGYLM*HTGQAP
Trigger: AGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTG...CTCCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTCCCCTGTCATTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATACTTGGCCTCTCTCCTaGCGCCTCACACCATTAAGC +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENTWPLS*RLTPLS
Trigger: GCTTAATGGTGTGAGGCGTCAGGAGAGAGGCCAAGT...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCCTTCAGAAGGCAATGTaGCCAGCAAAGGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GPLGSPSALPAPRSRAEILQKAM*PAKAQT
Trigger: AGTTTGAGCCTTTGCTGGTCACATTGCCTTCTGAAG...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGCTTCAGAAGGCAATGTaGCCAGCAAAGGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRLQKAM*PAKAQT
Trigger: AGTTTGAGCCTTTGCTGGTCACATTGCCTTCTGAAG...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCACAGGCCCATCACCACTaGCAGGTTGTCTACTCGCCC +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPQAHHH*QVVYSP
Trigger: GGGCGAGTAGACAACCTGGCAGTGGTGATGGGCCTG...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAATGAGCCATGGCCGATaGGCCAGCAACTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASMSHGR*ASNLLI
Trigger: GATCAACAAGTTGCTGGCGCATCGGCCATGGCTCAT...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGGCAGGGCTGCCATCTaGATCCCCCTCAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTGRAAI*IPLRED
Trigger: ATCCTCCCTGAGGGGGATGCAGATGGCAGCCCTGCC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAGGTGAGGCTATAGGCTaGCTGGAACTTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASGEAIG*LELLIQ
Trigger: CTGGATGAGAAGTTCCAGGCAGCCTATAGCCTCACC...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCAAGTTCCAGATGGCCCTaGGGAGCACGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPSSRWP*GARRCP
Trigger: TGGACACCTCCGTGCTCCGCAGGGCCATCTGGAACT...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CATCACATGCCCTCTAGAACCCAGATCCCCATGCCGGGGCCTCTTCTCTCCTGCAGATCCCAGAGTCAGTaGAATGAACTGTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: HHMPSRTQIPMPGPLLSCRSQSQ*NELSIP
Trigger: TGGAATGGACAGTTCATTGCACTGACTCTGGGATCT...GCAGGAGAGAAGAGGCCCCGGCATGGGGATCTGGGTTCTAGAGGGCATGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGAGAGAAGGCAAAGCTaGCTGGAGTGTCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLERRQS*LECQSR
Trigger: CCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGGGGGGTGTAGGTGCCTaGGGGGCAGGGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: RSRNSQSFATESAWNRSLGGVGA*GAGLPS
Trigger: AGATGGCAGCCCTGCCCCCCAGGCACCTACACCCCC...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGGATATAGTTCCAGATaGCCCTGCGGAGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLGYSSR*PCGARR
Trigger: CCTCCGTGCTCCGCAGGGCCATCTGGAACTATATCC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATGGAAAAGGGAGGGTGTaGCTTCGGGACTGCACATCA +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENGKGRV*LRDCTS
Trigger: TGATGTGCAGTCCCGAAGCCACACCCTCCCTTTTCC...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGACTGTGGCTCCAGGTTaGAACCTCAAGCATAAAGGA +
Preference number: 4 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMTVAPG*NLKHKG
Trigger: TCCTTTATGCTTGAGGTTCCAACCTGGAGCCACAGT...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCATCCTCTCACACACTGTaGCTCCAGGTTGGAACCTCA +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASSSHTL*LQVGTS
Trigger: TGAGGTTCCAACCTGGAGCCACAGTGTGTGAGAGGA...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGAAAGGCTCAACTTTTTaGGAGACATCTGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMKGSTF*ETSAAG
Trigger: CCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTT...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAGATGAGATACTGGGATaGGGGTGGGAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASDEILG*GWESSE
Trigger: TTCTGAGGACTCCCACCCCCATCCCAGTATCTCATC...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGAGATCCCAGAGTCAGTaGAATGAACTGTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRRSQSQ*NELSIP
Trigger: TGGAATGGACAGTTCATTGCACTGACTCTGGGATCT...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATGCAACAGCCTCAGGCTaGCCAACAGAACAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENATASG*PTEQAF
Trigger: AAAAGCCTGTTCTGTTGGGCAGCCTGAGGCTGTTGC...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AACACTTGTGGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCTCCCTGCTGAGCCATGGTaGCACCTAAGCCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: NTCGTLIPSLARLLSCALPAEPW*HLSHLE
Trigger: TTCTAGATGGCTTAGGTGGCACCATGGCTCAGCAGG...GAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGGTCCTTGGCTGCTTCTaGCTGGAAGCAACCCACTTA +
Preference number: 4 (lower is better)
Translates to: TQETLAAEMGSLILQENPVLGCF*LEATHL
Trigger: TAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGAC...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGTTTACAGTCATCACATaGCCTCTAGAACCCAGATCC +
Preference number: 4 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRFTVIT*PLEPRS
Trigger: GGATCTGGGTTCTAGAGGGCATGTGATGACTGTAAA...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCGAGAACGGCCGCTTTaGTGCTGGACTCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTRERPL*CWTLPP
Trigger: TGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCG...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTAGCAGCAAGTTCACGTaGACCTTCTCTGAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLSSKFT*TFSEWR
Trigger: CCGCCACTCAGAGAAGGTCCACGTGAACTTGCTGCT...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTACTGTGGCTCCAGGTTaGAACCTCAAGCATAAAGGA +
Preference number: 4 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESTVAPG*NLKHKG
Trigger: TCCTTTATGCTTGAGGTTCCAACCTGGAGCCACAGT...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCATGGCAGTCAGAGGTTTaGCAATGTAGCCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: RKSACCWQVGLRIPGAASWQSEV*QCSHGH
Trigger: GTGACCATGGCTACATTGCCAAACCTCTGACTGCCA...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAAGCTACAGAAAGTGCCTaGAATCGGTCCTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKATESA*NRSLAA
Trigger: AGCAGCCAAGGACCGATTCCAGGCACTTTCTGTAGC...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCAGTGTGGCTTCGGGACTaGACATCACACACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPVWLRD*TSHTSP
Trigger: TGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACAC...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGCAAGAAAATCCGCTTaGTGTTGGCAGGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLARKSA*CWQVGL
Trigger: CAGGCCAACCTGCCAACAGCAAGCGGATTTTCTTGC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGCCTTTCTTCAGTaGCCTCCAAACTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TQETLAAEMGSLILQENPLAFLQ*PPNWSE
Trigger: CTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAG...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAAGTCTTCAGCAAGGCCTaGATGTGTTCCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKVFSKA*MCSLVM
Trigger: CATCACCAAGGAACACATCCAGGCCTTGCTGAAGAC...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCACTTAGGATCTCCAAGTaGTCTTCCAGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPLRISK*SSSSQE
Trigger: CTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAG...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCACAGGCCGGAAGGGGGTaGCGGTTGCTTCTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAQAGRG*RLLLRA
Trigger: GGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTG...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCACACGGGTATTTAATGTaGCACACTGGCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AKPKISALEHWIPLPTHPHGYLM*HTGQAP
Trigger: AGGAGCCTGGCCAGTGTGCCACATTAAATACCCGTG...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCGATGGTATTGTAGGTaGGGCTATAGGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTRWYCR*GYRLPG
Trigger: TCCAGGCAGCCTATAGCCTCACCTACAATACCATCG...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AGGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAAAAAGATTTCTGCACTTaGACACTGGATACCACTCCC +
Preference number: 4 (lower is better)
Translates to: RHPGDTGCRNGVPDLARKKDFCT*TLDTTP
Trigger: GGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTT...TTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATAAAGATTTCTGCACTTaGACACTGGATACCACTCCC +
Preference number: 4 (lower is better)
Translates to: GTQETLAAEMGSLILQENKDFCT*TLDTTP
Trigger: GGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTT...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGTCCTTGGCTGCTTCTaGCTGGAAGCAACCCACTTA +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTVLGCF*LEATHL
Trigger: TAAGTGGGTTGCTTCCAGGCAGAAGCAGCCAAGGAC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGAGGCCACAACACTTGTaGCACATTAATTCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: TQETLAAEMGSLILQENPRPQHL*HINSEL
Trigger: AAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCT...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGCCTGGAATCGGTCCTTaGCTGCTTCTGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSRNSQSFATESAWNRSLPGIGP*LLLPGS
Trigger: GCTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGG...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAAGTCCGCCACGATCATaGTGCGCGCCAGGACCCGGT +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKASPPRS*CAPGPG
Trigger: ACCGGGTCCTGGCGCGCACCATGATCGTGGCGGACT...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CTGGTAGCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCGTCTTCAGCAAGGCCTaGATGTGTTCCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LVAKPKISALEHWIPLPTVFSKA*MCSLVM
Trigger: CATCACCAAGGAACACATCCAGGCCTTGCTGAAGAC...GGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGGGACACAAAAGGGTCTaGGGCTGTCTCCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: RSRNSQSFATESAWNRSLGHKRV*GCLQTE
Trigger: CTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCC...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTAGGCCACAACACTTGTaGCACATTAATTCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: QETLAAEMGSLILQENPLRPQHL*HINSEL
Trigger: AAGCTCGGAATTAATGTGCCACAAGTGTTGTGGCCT...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGATGAGCCATGGCCGATaGGCCAGCAACTTGTTGATC +
Preference number: 4 (lower is better)
Translates to: RSRNSQSFATESAWNRSLMSHGR*ASNLLI
Trigger: GATCAACAAGTTGCTGGCGCATCGGCCATGGCTCAT...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGCTTAGGATCTCCAAGTaGTCTTCCAGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSRNSQSFATESAWNRSLLRISK*SSSSQE
Trigger: CTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAG...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp ACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAATGCTGGAGGCAGGAGAGTaGGGTGCTGGCCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TKIKRIYNLILPPLQKAMLEAGE*GAGLCE
Trigger: CTCGCAGAGGCCAGCACCCCACTCTCCTGCCTCCAG...CATTGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCACACGTGGACCTTCTCTaGGTGGCGGAAGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAHVDLL*VAEVPP
Trigger: TGGAGGCACTTCCGCCACTCAGAGAAGGTCCACGTG...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAGTTGGCAGGTTGGCCTaGGAATCCCAGGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAVGRLA*ESQGQL
Trigger: AAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAAC...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAAAGGAGGAGAGCGAGTaGCAGTGGGTGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAKEESE*QWVSRT
Trigger: GGTCCTGCTCACCCACTGCCACTCGCTCTCCTCCTT...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAGCACCCAGGAGACACTaGCTGCAGAAATGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAAPRRH*LQKWGP
Trigger: GGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGC...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 72 bp TGGACACACAGACCAGCTGTGACCCTGACTTTCACATaGATGGGTGAATGGCAAGTAGGAGGTAATGAAATC +
Preference number: 4 (lower is better)
Translates to: WTHRPAVTLTFT*MGEWQVGGNEI
Trigger: GATTTCATTACCTCCTACTTGCCATTCACCCATCAATGTGAAAGTCAGGGTCACAGCTGGTCTGTGTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
3UTR CAA 72 bp AGAAGAAGGGCAAGAGAAGTCGTAATTCACAGTCATTaGCTACAGAAAGTGCCTGGAATCGGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRRAREVVIHSH*LQKVPGIGPWL
Trigger: CAGCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCTCTTGCCCTTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp ACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAATGCACGTGGACCTTCTCTaGGTGGCGGAAGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TKIKRIYNLILPPLQKAMHVDLL*VAEVPP
Trigger: TGGAGGCACTTCCGCCACTCAGAGAAGGTCCACGTG...CATTGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR TCA 90 bp ACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAATGGTTGGCAGGTTGGCCTaGGAATCCCAGGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TKIKRIYNLILPPLQKAMVGRLA*ESQGQL
Trigger: AAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAAC...CATTGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGATTTGCTACAGAAAGTaGCTGGAATCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSRNSQSFATESAWNRSLICYRK*LESVLG
Trigger: GCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAAT...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAAAAGCACAGCATGTCTaGGTGTGGAGAGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAKAQHV*VWRGLQ
Trigger: CTGGAGCCCTCTCCACACCCAGACATGCTGTGCTTT...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAGGACAGATGAGATACTaGGATGGGGGTGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKAGQMRY*DGGGSP
Trigger: AGGACTCCCACCCCCATCCCAGTATCTCATCTGTCC...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CCA 90 bp AGGACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCATCCTCTCACACACTGTaGCTCCAGGTTGGAACCTCA +
Preference number: 4 (lower is better)
Translates to: RTKIKRIYNLILPPLQKASSHTL*LQVGTS
Trigger: TGAGGTTCCAACCTGGAGCCACAGTGTGTGAGAGGA...TGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR GCA 90 bp ACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAATGATTTGCTACAGAAAGTaGCTGGAATCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TKIKRIYNLILPPLQKAMICYRK*LESVLG
Trigger: GCCAAGGACCGATTCCAGGCACTTTCTGTAGCAAAT...CATTGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp GCGCCAGGACCCGGTCGCGGCTCGCCGACGACCCGTGCACCCGAGTaGGTTTCGGAGGGACGCCCGAATGAAGCCGGGACTGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: APGPGRGSPTTRAPE*VSEGRPNEAGTGRR
Trigger: GCGGCGCCCAGTCCCGGCTTCATTCGGGCGTCCCTCCGAAACCCACTCGGGTGCACGGGTCGTCGGCGAGCCGCGACCGGGTCCTGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 90 bp GGCCCGAGTCGCCGACGCCGCCCGGGGCGAACCGCAGGTAGTCCTTaGGCTCTGCGCGGCACTCGGAGTCCGCCACGATCATGGTGCGCG +
Preference number: 5 (lower is better)
Translates to: GPSRRRRPGRTAGSP*ALRGTRSPPRSWCA
Trigger: CGCGCACCATGATCGTGGCGGACTCCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGTTCGCCCCGGGCGGCGTCGGCGACTCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp GTCGCCGACGCCGCCCGGGGCGAACCGCAGGTAGTCCTTGAGCTCTaGGCGGCACTCGGAGTCCGCCACGATCATGGTGCGCGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: VADAARGEPQVVLEL*AALGVRHDHGARQD
Trigger: GTCCTGGCGCGCACCATGATCGTGGCGGACTCCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGTTCGCCCCGGGCGGCGTCGGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp CTCGGGGCTCCAGAACGCTCCGGAATCCGAGAACGGCCGCTTTGGTaGTGGACTCTTCCCCCAGTCGGGCTTCGGGAACGGCGAACGGCC +
Preference number: 5 (lower is better)
Translates to: LGAPERSGIRERPLW*WTLPPVGLRERRTA
Trigger: GGCCGTTCGCCGTTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGGAGCCCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp TCCTCCTGGGACGTCCCCTCATCCCGCAGCAGGCTCTCCTGCAGCTaGTGCATGCGCTCCATCAGCGCCTCCACGTCGCGGGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: SSWDVPSSRSRLSCS*CMRSISASTSRADS
Trigger: TGAGTCTGCCCGCGACGTGGAGGCGCTGATGGAGCGCATGCAGCAGCTGCAGGAGAGCCTGCTGCGGGATGAGGGGACGTCCCAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp TCCATCTCCTCCTGGGACGTCCCCTCATCCCGCAGCAGGCTCTCCTaGAGCTGCTGCATGCGCTCCATCAGCGCCTCCACGTCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: SISSWDVPSSRSRLS*SCCMRSISASTSRA
Trigger: TGCCCGCGACGTGGAGGCGCTGATGGAGCGCATGCAGCAGCTGCAGGAGAGCCTGCTGCGGGATGAGGGGACGTCCCAGGAGGAGATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp GGGGCTCCAGAACGCTCCGGAATCCGAGAACGGCCGCTTTGGTGCTaGACTCTTCCCCCAGTCGGGCTTCGGGAACGGCGAACGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GAPERSGIRERPLWC*TLPPVGLRERRTAS
Trigger: CGAGGCCGTTCGCCGTTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGGAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp TTGTCTACTCGCCCAGAGGACATCAGTGCCTCCAGCCCCAGGTGCTaGTCGAGGCTCTCAGCCCCCTCCCGAAGGACCTCCTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: LSTRPEDISASSPRC*SRLSAPSRRTSSTG
Trigger: CCCCGTGGAGGAGGTCCTTCGGGAGGGGGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGAGGCACTGATGTCCTCTGGGCGAGTAGACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAGGGCAGCTTCAGACATaGTGGGGACTCAGACCCACC +
Preference number: 5 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAGQLQT*WGLRPT
Trigger: GGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCC...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp TGTGGCTTCGGGACTGCACATCACACACAAGCCCACTGCAGCGTGGGGAGGGTGGGAAGGGGGTGCCGGTaGCTTCTCCGCGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: CGFGTAHHTQAHCSVGRVGRGCR*LLRACT
Trigger: CGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCC...CACCCTCCCCACGCTGCAGTGGGCTTGTGTGTGATGTGCAGTCCCGAAGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp AGGTTGTCTACTCGCCCAGAGGACATCAGTGCCTCCAGCCCCAGGTaGTGCTCGAGGCTCTCAGCCCCCTCCCGAAGGACCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: RLSTRPEDISASSPR*CSRLSAPSRRTSST
Trigger: CGTGGAGGAGGTCCTTCGGGAGGGGGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGAGGCACTGATGTCCTCTGGGCGAGTAGACAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp TCTCTCGGGGCTCCAGAACGCTCCGGAATCCGAGAACGGCCGCTTTaGTGCTGGACTCTTCCCCCAGTCGGGCTTCGGGAACGGCGAACG +
Preference number: 5 (lower is better)
Translates to: SLGAPERSGIRERPL*CWTLPPVGLRERRT
Trigger: CGTTCGCCGTTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGGAGCCCCGAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCCGAGAACGGCCGCTTaGGTGCTGGACTCTTCCCCC +
Preference number: 5 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPPRTAA*VLDSSP
Trigger: GGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGG...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCAATCACCACTGCCAGGTaGTCTACTCGCCCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPAITTAR*STRPED
Trigger: GTCCTCTGGGCGAGTAGACAACCTGGCAGTGGTGAT...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGCGCCTGCATGCCTCCAGAAGAGGTaGTACATTCTTCGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: AGRAFRPEGGAGCFSAPACLQKR*YILRVV
Trigger: GACCACCCGAAGAATGTACAACCTCTTCTGGAGGCA...TGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 90 bp AAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTaGACCGGGCCCAGGTCCTGCTCAGGAGTCAGGTCATGTAGCGGG +
Preference number: 5 (lower is better)
Translates to: KGLGLSPDREVLVGS*TGPRSCSGVRSCSG
Trigger: CCCGCTACATGACCTGACTCCTGAGCAGGACCTGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp GCGCCAGAAGCTGGTAAAGTAGTCAGGGTGCAGGCCCATCACCACTaGCAGGTTGTCTACTCGCCCAGAGGACATCAGTGCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: APEAGKVVRVQAHHH*QVVYSPRGHQCLQP
Trigger: GGGCTGGAGGCACTGATGTCCTCTGGGCGAGTAGACAACCTGGCAGTGGTGATGGGCCTGCACCCTGACTACTTTACCAGCTTCTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp AACTTGTTGATCTCGCTGAGTTTGCGCAGCTTCTCGGGGGCCCGGTaGAGGCCCAGCAGCCACTCAGGGTCACCACCAGTCTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: NLLISLSLRSFSGAR*RPSSHSGSPPVCRN
Trigger: GTTTCTGCAGACTGGTGGTGACCCTGAGTGGCTGCTGGGCCTCCACCGGGCCCCCGAGAAGCTGCGCAAACTCAGCGAGATCAACAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGGGAAGGGGGTGCCGGTaGCTTCTCCGCGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: TQETLAAEMGSLILQENPGRGCR*LLRACT
Trigger: CGTGCAGGCGCGGAGAAGCAACCGGCACCCCCTTCC...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp GGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTaGGGAGCTGAACCGGGCCCAGGTCCTGCTCAGGAGTCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: GHKRVWGCLQTEKSL*GAEPGPGPAQESGH
Trigger: ATGACCTGACTCCTGAGCAGGACCTGGGCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCAGTACAGCAGAGCGGCTaGCATGCGCGCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RKSACCWQVGLRIPGAASVQQSG*HARLQE
Trigger: CTCCTGGAGGCGCGCATGCAAGCCGCTCTGCTGTAC...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGTGCAAGAAAATCCGCTaGCTGTTGGCAGGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPCKKIR*LLAGWP
Trigger: AGGCCAACCTGCCAACAGCAAGCGGATTTTCTTGCA...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGGCCTGGAATCGGTCCTaGGCTGCTTCTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRAWNRS*AASAWK
Trigger: CTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGC...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGGCCTGGAATCGGTCCTaGGCTGCTTCTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMAWNRS*AASAWK
Trigger: CTTCCAGGCAGAAGCAGCCAAGGACCGATTCCAGGC...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCCTCCTGCACACCTTCTaGCAGGGAGGGCTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GPLGSPSALPAPRSRAEILLHTF*QGGLSG
Trigger: GCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAG...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp TGGCTGCTTCTGCCTGGAAGCAACCCACTTAAGCCCCAGGAGAGGGGACAGATGCTCCTGCACACCTTCTaGCAGGGAGGGCTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: WLLLPGSNPLKPQERGQMLLHTF*QGGLSG
Trigger: GCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAG...CATCTGTCCCCTCTCCTGGGGCTTAAGTGGGTTGCTTCCAGGCAGAAGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGCGATGCGCCAGCAACTaGTTGATCTCGCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GLFSPAHLLAGRAFRPEGRCASN*LISLSL
Trigger: CAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCG...CCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AAGGCTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTCAGACAGAGAAGTCCTaGTGGGGAGCTGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: KAQLFGRHLRQGHWRQESQTEKS*WGAEPG
Trigger: GCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTG...ACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCTTCTTGCAGGGAGGGCTTTCAGGCCGGAAGGGGGTGCCGGTTGCTTCTCCGGGAAGGCCACAACACTaGTGGCACATTAATTCCGAG +
Preference number: 5 (lower is better)
Translates to: TFLQGGLSGRKGVPVASPGRPQH*WHINSE
Trigger: CTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCC...CGGAGAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTGCAAGAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CGGGGGCCAGCCAGGGACTTCCCAGTTCAGGAAGGCCACAACACTTGTGGCACAGAAAGGCTCAACTTTTaGGGAGACATCTGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: RGPARDFPVQEGHNTCGTERLNF*GDICGR
Trigger: CCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTC...TGTGCCACAAGTGTTGTGGCCTTCCTGAACTGGGAAGTCCCTGGCTGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp TCTGGAAATGACAGGGGAGAGAAGGCAAAGCTGCCTGGAGTGTCAGTCCCGGAGGGGCAGCTTCAGACATaGTGGGGACTCAGACCCACC +
Preference number: 5 (lower is better)
Translates to: SGNDRGEKAKLPGVSVPEGQLQT*WGLRPT
Trigger: GGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCC...CTCCGGGACTGACACTCCAGGCAGCTTTGCCTTCTCTCCCCTGTCATTTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 90 bp GCACGGAGGTGTCCACACCACTGTGCATGGCGATGGTATTGTAGGTaGGGCTATAGGCTGCCTGGAACTTCTCATCCAGCAGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: ARRCPHHCAWRWYCR*GYRLPGTSHPAAAH
Trigger: GTGGGCAGCTGCTGGATGAGAAGTTCCAGGCAGCCTATAGCCTCACCTACAATACCATCGCCATGCACAGTGGTGTGGACACCTCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp GCCGGTCTTCAGCAAGGCCTGGATGTGTTCCTTGGTGATGAGCCATaGCCGATGCGCCAGCAACTTGTTGATCTCGCTGAGTTTGCGCAG +
Preference number: 5 (lower is better)
Translates to: AGLQQGLDVFLGDEP*PMRQQLVDLAEFAQ
Trigger: CTGCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCAGGCCTTGCTGAAGACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GGGCATGGGACACAAAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGATCACCACTGCCAGGTaGTCTACTCGCCCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: GHGTQKGLGLSPDREVLVITTAR*STRPED
Trigger: GTCCTCTGGGCGAGTAGACAACCTGGCAGTGGTGAT...CACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTTTGTGTCCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGTACAGCAGAGCGGCTaGCATGCGCGCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QETLAAEMGSLILQENPLVQQSG*HARLQE
Trigger: CTCCTGGAGGCGCGCATGCAAGCCGCTCTGCTGTAC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GCAAAGCCAAAGATTTCTGCACTTGAACACTGGATACCACTCCCTACCCACCCACCGAGAACGGCCGCTTaGGTGCTGGACTCTTCCCCC +
Preference number: 5 (lower is better)
Translates to: AKPKISALEHWIPLPTHPPRTAA*VLDSSP
Trigger: GGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGG...TGGGTGGGTAGGGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTGGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGTGCGCCAGCAACTTGTaGATCTCGCTGAGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMCASNL*ISLSLR
Trigger: GCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCA...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CTGCAGCTGTGGCAGTCAGAGGTTTGGCAATGTAGCCATGGTCACCTGGCCATGTCAAAGCCCCCAGAGTaGTTCAACGGGTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LQLWQSEVWQCSHGHLAMSKPPE*FNGSLL
Trigger: AAGCAGGGACCCGTTGAACAACTCTGGGGGCTTTGA...CATGGCCAGGTGACCATGGCTACATTGCCAAACCTCTGACTGCCACAGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GGCACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCAGACAGAGAAGTCCTaGTGGGGAGCTGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: GTQETLAAEMGSLILQENQTEKS*WGAEPG
Trigger: GCCCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTG...ATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGACATTAATTCCGAGCTaGGCCCGGCTTCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LNFLGDICGRATGGRRVGTLIPS*ARLLSC
Trigger: ACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGT...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGGGAAGGCCACAACACTaGTGGCACATTAATTCCGAG +
Preference number: 5 (lower is better)
Translates to: LNFLGDICGRATGGRRVGGRPQH*WHINSE
Trigger: CTCGGAATTAATGTGCCACAAGTGTTGTGGCCTTCC...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CTCAACTTTTTGGGAGACATCTGCGGCAGGGCCACTGGAGGCAGGAGAGTGGGGAAAATCCGCTTGCTGTaGGCAGGTTGGCCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: LNFLGDICGRATGGRRVGKIRLL*AGWPEN
Trigger: ATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTT...CCCCACTCTCCTGCCTCCAGTGGCCCTGCCGCAGATGTCTCCCAAAAAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGTGCAAGAAAATCCGCTaGCTGTTGGCAGGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRCKKIR*LLAGWP
Trigger: AGGCCAACCTGCCAACAGCAAGCGGATTTTCTTGCA...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CCCAGGGGCAGCTTCAGACATTGTGGGGACTCAGACCCACCCTCTCAGTCTGCAATGGGGTCCCTGATCTaGCAAGAAAATCCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: PRGSFRHCGDSDPPSQSAMGSLI*QENPLA
Trigger: AGCAAGCGGATTTTCTTGCAAGATCAGGGACCCCAT...TGCAGACTGAGAGGGTGGGTCTGAGTCCCCACAATGTCTGAAGCTGCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp TTCAGCAAGGCCTGGATGTGTTCCTTGGTGATGAGCCATGGCCGATaGGCCAGCAACTTGTTGATCTCGCTGAGTTTGCGCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FSKAWMCSLVMSHGR*ASNLLISLSLRSFS
Trigger: CGAGAAGCTGCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCAGGCCTTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 90 bp CACACCACTGTGCATGGCGATGGTATTGTAGGTGAGGCTATAGGCTaGCTGGAACTTCTCATCCAGCAGCTGCCCACCCTCAGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HTTVHGDGIVGEAIG*LELLIQQLPTLRVK
Trigger: CTTTACCCTGAGGGTGGGCAGCTGCTGGATGAGAAGTTCCAGGCAGCCTATAGCCTCACCTACAATACCATCGCCATGCACAGTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GCCCTTGCCTTTCTTCAGTGCCCTCCAAACTGGTCAGAGAGGAGGCACAGACTGCGATGCGCCAGCAACTaGTTGATCTCGCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: ALAFLQCPPNWSERRHRLRCASN*LISLSL
Trigger: CAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCG...CAGTCTGTGCCTCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGGCCTGGATGTGTTCCTaGGTGATGAGCCATGGCCGA +
Preference number: 5 (lower is better)
Translates to: TQETLAAEMGSLILQENPAWMCS*VMSHGR
Trigger: TCGGCCATGGCTCATCACCAAGGAACACATCCAGGC...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AGAAAATCCGCTTGCTGTTGGCAGGTTGGCCTGAGAATCCCAGGGGCAGCTTCATCAAAGCCCCCAGAGTaGTTCAACGGGTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RKSACCWQVGLRIPGAASSKPPE*FNGSLL
Trigger: AAGCAGGGACCCGTTGAACAACTCTGGGGGCTTTGA...TGAAGCTGCCCCTGGGATTCTCAGGCCAACCTGCCAACAGCAAGCGGATTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp GGTCCCTTAGGATCTCCAAGTGCTCTTCCAGCTCCCAGGAGCAGGGCTGAGATCACATTAATTCCGAGCTaGGCCCGGCTTCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GPLGSPSALPAPRSRAEITLIPS*ARLLSC
Trigger: ACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGT...GATCTCAGCCCTGCTCCTGGGAGCTGGAAGAGCACTTGGAGATCCTAAGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ATGCCGGGGCCTCTTCTCTCCTGCACACCTTCTTGCAGGGAGGGCTTTCAGGCCCAAAGATTTCTGCACTaGAACACTGGATACCACTCC +
Preference number: 5 (lower is better)
Translates to: MPGPLLSCTPSCREGFQAQRFLH*NTGYHS
Trigger: GGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTG...GGCCTGAAAGCCCTCCCTGCAAGAAGGTGTGCAGGAGAGAAGAGGCCCCGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGCCTGGATGTGTTCCTaGGTGATGAGCCATGGCCGA +
Preference number: 5 (lower is better)
Translates to: QETLAAEMGSLILQENPLAWMCS*VMSHGR
Trigger: TCGGCCATGGCTCATCACCAAGGAACACATCCAGGC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AAAGGGTCTGGGGCTGTCTCCAGACAGAGAAGTCCTTGTGGGGAGCTGAACCGGACCCTGACTTTCACATaGATGGGTGAATGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: KGSGAVSRQRSPCGELNRTLTFT*MGEWQV
Trigger: TACTTGCCATTCACCCATCAATGTGAAAGTCAGGGT...CCGGTTCAGCTCCCCACAAGGACTTCTCTGTCTGGAGACAGCCCCAGACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 90 bp GAAGTGCCTCCAGAAGAGGTTGTACATTCTTCGGGTGGTCTTCTCTaGGTAGCAGGCCACTGTCTTGATATAGACCTTGAGGTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: EVPPEEVVHSSGGLL*VAGHCLDIDLEVPL
Trigger: GAGCGGAACCTCAAGGTCTATATCAAGACAGTGGCCTGCTACCCAGAGAAGACCACCCGAAGAATGTACAACCTCTTCTGGAGGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp CAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGCTTGAAAGGCTCAACTTTTaGGGAGACATCTGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: QETLAAEMGSLILQENPLERLNF*GDICGR
Trigger: CCTGCCGCAGATGTCTCCCAAAAAGTTGAGCCTTTC...AAGCGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCCAGGAGACACTGGCTGCAGAAATGGGGTCCCTGATCTTGCAAGAAAATCCGATGGGGTCCCTGATCTaGCAAGAAAATCCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: TQETLAAEMGSLILQENPMGSLI*QENPLA
Trigger: AGCAAGCGGATTTTCTTGCAAGATCAGGGACCCCAT...CGGATTTTCTTGCAAGATCAGGGACCCCATTTCTGCAGCCAGTGTCTCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AACACTTGTGGCACATTAATTCCGAGCTTGGCCCGGCTTCTTTCCTGTGCCCTCACCCTGACTTTCACATaGATGGGTGAATGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: NTCGTLIPSLARLLSCALTLTFT*MGEWQV
Trigger: TACTTGCCATTCACCCATCAATGTGAAAGTCAGGGT...GAGGGCACAGGAAAGAAGCCGGGCCAAGCTCGGAATTAATGTGCCACAAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp AGAAGTCGTAATTCACAGTCATTTGCTACAGAAAGTGCCTGGAATCGGTCCTTGCAAAGATTTCTGCACTaGAACACTGGATACCACTCC +
Preference number: 5 (lower is better)
Translates to: RSRNSQSFATESAWNRSLQRFLH*NTGYHS
Trigger: GGAGTGGTATCCAGTGTTCAAGTGCAGAAATCTTTG...CAAGGACCGATTCCAGGCACTTTCTGTAGCAAATGACTGTGAATTACGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS-3UTR CAA 90 bp ACCAAAATAAAGAGGATTTATAATCTAATACTCCCTCCTCTTCAGAAGGCAATGTGCCTCCAGAAGAGGTaGTACATTCTTCGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: TKIKRIYNLILPPLQKAMCLQKR*YILRVV
Trigger: GACCACCCGAAGAATGTACAACCTCTTCTGGAGGCA...CATTGCCTTCTGAAGAGGAGGGAGTATTAGATTATAAATCCTCTTTATTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 72 bp CGCCGACGCCGCCCGGGGCGAACCGCAGGTAGTCCTTaGGCTCTGCGCGGCACTCGGAGTCCGCCACGATCA +
Preference number: 6 (lower is better)
Translates to: RRRRPGRTAGSP*ALRGTRSPPRS
Trigger: TGATCGTGGCGGACTCCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGTTCGCCCCGGGCGGCGTCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp CCCGGTCGCGGCTCGCCGACGACCCGTGCACCCGAGTaGGTTTCGGAGGGACGCCCGAATGAAGCCGGGACT +
Preference number: 6 (lower is better)
Translates to: PGRGSPTTRAPE*VSEGRPNEAGT
Trigger: AGTCCCGGCTTCATTCGGGCGTCCCTCCGAAACCCACTCGGGTGCACGGGTCGTCGGCGAGCCGCGACCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp GCCGCCCGGGGCGAACCGCAGGTAGTCCTTGAGCTCTaGGCGGCACTCGGAGTCCGCCACGATCATGGTGCG +
Preference number: 6 (lower is better)
Translates to: AARGEPQVVLEL*AALGVRHDHGA
Trigger: CGCACCATGATCGTGGCGGACTCCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGTTCGCCCCGGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp CGCCCAGAGGACATCAGTGCCTCCAGCCCCAGGTGCTaGTCGAGGCTCTCAGCCCCCTCCCGAAGGACCTCC +
Preference number: 6 (lower is better)
Translates to: RPEDISASSPRC*SRLSAPSRRTS
Trigger: GGAGGTCCTTCGGGAGGGGGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGAGGCACTGATGTCCTCTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp GACGTCCCCTCATCCCGCAGCAGGCTCTCCTGCAGCTaGTGCATGCGCTCCATCAGCGCCTCCACGTCGCGG +
Preference number: 6 (lower is better)
Translates to: DVPSSRSRLSCS*CMRSISASTSR
Trigger: CCGCGACGTGGAGGCGCTGATGGAGCGCATGCAGCAGCTGCAGGAGAGCCTGCTGCGGGATGAGGGGACGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp CGGGTGATGGCACGGAGGGCGTACAGCAGAGCGGCTTaGATGCGCGCCTCCAGGAGCAGCAAGTTCACGTGG +
Preference number: 6 (lower is better)
Translates to: RVMARRAYSRAA*MRASRSSKFTW
Trigger: CCACGTGAACTTGCTGCTCCTGGAGGCGCGCATGCAAGCCGCTCTGCTGTACGCCCTCCGTGCCATCACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp ATCTCGCTGAGTTTGCGCAGCTTCTCGGGGGCCCGGTaGAGGCCCAGCAGCCACTCAGGGTCACCACCAGTC +
Preference number: 6 (lower is better)
Translates to: ISLSLRSFSGAR*RPSSHSGSPPV
Trigger: GACTGGTGGTGACCCTGAGTGGCTGCTGGGCCTCCACCGGGCCCCCGAGAAGCTGCGCAAACTCAGCGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 90 bp GTCTCTCGGGGCTCCAGAACGCTCCGGAATCCGAGAACGGCCGCTTaGGTGCTGGACTCTTCCCCCAGTCGGGCTTCGGGAACGGCGAAC +
Preference number: 6 (lower is better)
Translates to: VSRGSRTLRNPRTAA*VLDSSPSRASGTAN
Trigger: GTTCGCCGTTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGGAGCCCCGAGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 72 bp GAGAGCGAGTGGCAGTGGGTGAGCAGGACCAGAGCCTaGATGAGCTCGGCCAGGGACCAAGTGTGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: ESEWQWVSRTRA*MSSARDQVCSP
Trigger: CGGCGAGCACACTTGGTCCCTGGCCGAGCTCATTCAGGCTCTGGTCCTGCTCACCCACTGCCACTCGCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp CCAGAACGCTCCGGAATCCGAGAACGGCCGCTTTGGTaGTGGACTCTTCCCCCAGTCGGGCTTCGGGAACGG +
Preference number: 6 (lower is better)
Translates to: PERSGIRERPLW*WTLPPVGLRER
Trigger: CCGTTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp GAACGCTCCGGAATCCGAGAACGGCCGCTTTGGTGCTaGACTCTTCCCCCAGTCGGGCTTCGGGAACGGCGA +
Preference number: 6 (lower is better)
Translates to: ERSGIRERPLWC*TLPPVGLRERR
Trigger: TCGCCGTTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 72 bp GGCTCCAGAACGCTCCGGAATCCGAGAACGGCCGCTTaGGTGCTGGACTCTTCCCCCAGTCGGGCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: GSRTLRNPRTAA*VLDSSPSRASG
Trigger: TCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 72 bp CCCAGGTCCTGCTCAGGAGTCAGGTCATGTAGCGGGTaGTGGCACGGAGGGCGTACAGCAGAGCGGCTTGCA +
Preference number: 6 (lower is better)
Translates to: PRSCSGVRSCSG*WHGGRTAERLA
Trigger: TGCAAGCCGCTCTGCTGTACGCCCTCCGTGCCATCACCCGCTACATGACCTGACTCCTGAGCAGGACCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp GCTCCAGAACGCTCCGGAATCCGAGAACGGCCGCTTTaGTGCTGGACTCTTCCCCCAGTCGGGCTTCGGGAA +
Preference number: 6 (lower is better)
Translates to: APERSGIRERPL*CWTLPPVGLRE
Trigger: TTCCCGAAGCCCGACTGGGGGAAGAGTCCAGCACCAAAGCGGCCGTTCTCGGATTCCGGAGCGTTCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp GACTTCTCCAGCTCAAAGCGGCTCTCCATCTCCTCCTaGGACGTCCCCTCATCCCGCAGCAGGCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: DFSSSKRLSISS*DVPSSRSRLSC
Trigger: GCAGGAGAGCCTGCTGCGGGATGAGGGGACGTCCCAGGAGGAGATGGAGAGCCGCTTTGAGCTGGAGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 90 bp ATGAGCCATGGCCGATGCGCCAGCAACTTGTTGATCTCGCTGAGTTaGCGCAGCTTCTCGGGGGCCCGGTGGAGGCCCAGCAGCCACTCA +
Preference number: 6 (lower is better)
Translates to: MSHGRCASNLLISLS*RSFSGARWRPSSHS
Trigger: TGAGTGGCTGCTGGGCCTCCACCGGGCCCCCGAGAAGCTGCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 90 bp GGTCATGTAGCGGGTGATGGCACGGAGGGCGTACAGCAGAGCGGCTaGCATGCGCGCCTCCAGGAGCAGCAAGTTCACGTGGACCTTCTC +
Preference number: 6 (lower is better)
Translates to: GHVAGDGTEGVQQSG*HARLQEQQVHVDLL
Trigger: GAGAAGGTCCACGTGAACTTGCTGCTCCTGGAGGCGCGCATGCAAGCCGCTCTGCTGTACGCCCTCCGTGCCATCACCCGCTACATGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 90 bp ATGTGTTCCTTGGTGATGAGCCATGGCCGATGCGCCAGCAACTTGTaGATCTCGCTGAGTTTGCGCAGCTTCTCGGGGGCCCGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: MCSLVMSHGRCASNL*ISLSLRSFSGARWR
Trigger: CCTCCACCGGGCCCCCGAGAAGCTGCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 90 bp TGGATGTGTTCCTTGGTGATGAGCCATGGCCGATGCGCCAGCAACTaGTTGATCTCGCTGAGTTTGCGCAGCTTCTCGGGGGCCCGGTGG +
Preference number: 6 (lower is better)
Translates to: WMCSLVMSHGRCASN*LISLSLRSFSGARW
Trigger: CCACCGGGCCCCCGAGAAGCTGCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp TTCCCAGGTATAATCCTGGGCCCGGAAGGTAGGGGGTaGCTGAGCCCCTCTCCGAGTGAAGTCCTCATATCC +
Preference number: 6 (lower is better)
Translates to: FPGIILGPEGRG*LSPSPSEVLIS
Trigger: GGATATGAGGACTTCACTCGGAGAGGGGCTCAGGCACCCCCTACCTTCCGGGCCCAGGATTATACCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp GCTGGTAAAGTAGTCAGGGTGCAGGCCCATCACCACTaGCAGGTTGTCTACTCGCCCAGAGGACATCAGTGC +
Preference number: 6 (lower is better)
Translates to: AGKVVRVQAHHH*QVVYSPRGHQC
Trigger: GCACTGATGTCCTCTGGGCGAGTAGACAACCTGGCAGTGGTGATGGGCCTGCACCCTGACTACTTTACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CAA 72 bp TCCTTGGTGATGAGCCATGGCCGATGCGCCAGCAACTaGTTGATCTCGCTGAGTTTGCGCAGCTTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SLVMSHGRCASN*LISLSLRSFSG
Trigger: CCCCGAGAAGCTGCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp GCCTGGATGTGTTCCTTGGTGATGAGCCATGGCCGATaGGCCAGCAACTTGTTGATCTCGCTGAGTTTGCGC +
Preference number: 6 (lower is better)
Translates to: AWMCSLVMSHGR*ASNLLISLSLR
Trigger: GCGCAAACTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp CAGCAAGGCCTGGATGTGTTCCTTGGTGATGAGCCATaGCCGATGCGCCAGCAACTTGTTGATCTCGCTGAG +
Preference number: 6 (lower is better)
Translates to: QQGLDVFLGDEP*PMRQQLVDLAE
Trigger: CTCAGCGAGATCAACAAGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCAGGCCTTGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS GCA 72 bp AGCAAGTTCACGTGGACCTTCTCTGAGTGGCGGAAGTaGCTCCAGAAGAGGTTGTACATTCTTCGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SKFTWTFSEWRK*LQKRLYILRVV
Trigger: GACCACCCGAAGAATGTACAACCTCTTCTGGAGGCACTTCCGCCACTCAGAGAAGGTCCACGTGAACTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS TCA 72 bp TGTCCACACCACTGTGCATGGCGATGGTATTGTAGGTaGGGCTATAGGCTGCCTGGAACTTCTCATCCAGCA +
Preference number: 6 (lower is better)
Translates to: CPHHCAWRWYCR*GYRLPGTSHPA
Trigger: TGCTGGATGAGAAGTTCCAGGCAGCCTATAGCCTCACCTACAATACCATCGCCATGCACAGTGGTGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2
CDS CCA 72 bp CCAGAAGAGGTTGTACATTCTTCGGGTGGTCTTCTCTaGGTAGCAGGCCACTGTCTTGATATAGACCTTGAG +
Preference number: 6 (lower is better)
Translates to: PEEVVHSSGGLL*VAGHCLDIDLE
Trigger: CTCAAGGTCTATATCAAGACAGTGGCCTGCTACCCAGAGAAGACCACCCGAAGAATGTACAACCTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253063.4
ENST00000645231.2