RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SESN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000080546

Ensembl transcript IDs: ENST00000302071.6, ENST00000356644.7, ENST00000368971.2, ENST00000436639.6, ENST00000517548.1, ENST00000523632.1

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTaGGTGCTGGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: APRTAQQSTATCPTT*VLETQVMHKTAALQ
Trigger: CTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTCTACCATTGGTCCTaGGGCTTAGTACCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: TAQQSTATCPTTLVLETQVYHWS*GLVPSP
Trigger: GGGGGAAGGTACTAAGCCCCAGGACCAATGGTAGAC...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTAACAGTCACTGCTTGTaGCAGCAGTGGTTTTCCACA +
Preference number: 2 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGNSHCL*QQWFST
Trigger: TGTGGAAAACCACTGCTGGCACAAGCAGTGACTGTT...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAACTGCCAAACAGTCACTaGTTGTGCCAGCAGTGGTTT +
Preference number: 2 (lower is better)
Translates to: TAQQSTATCPTTLVLETQLPNSH*LCQQWF
Trigger: AAACCACTGCTGGCACAAGCAGTGACTGTTTGGCAG...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAACTGCCAAACAGTCACTaGTTGTGCCAGCAGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCELPNSH*LCQQWF
Trigger: AAACCACTGCTGGCACAAGCAGTGACTGTTTGGCAG...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAAACAGTCACTGCTTGTaGCAGCAGTGGTTTTCCACA +
Preference number: 2 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCENSHCL*QQWFST
Trigger: TGTGGAAAACCACTGCTGGCACAAGCAGTGACTGTT...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGGTCTACCATTGGTCCTaGGGCTTAGTACCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: STATCPTTLVLETQVMHKVYHWS*GLVPSP
Trigger: GGGGGAAGGTACTAAGCCCCAGGACCAATGGTAGAC...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR TCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTAGTGTCAGGATCCTGTaGAACAGCATATCAAAAGAT +
Preference number: 2 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGSVRIL*NSISKD
Trigger: ATCTTTTGATATGCTGTTTCACAGGATCCTGACACT...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCAAAAGCAACAGGATTTaGAGAGTTACTATTTGCTGT +
Preference number: 2 (lower is better)
Translates to: AERLNAPRTAQQSTATCPKSNRI*RVTICC
Trigger: ACAGCAAATAGTAACTCTCCAAATCCTGTTGCTTTT...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGAACAGTCACTGCTTGTaGCAGCAGTGGTTTTCCACA +
Preference number: 2 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRNSHCL*QQWFST
Trigger: TGTGGAAAACCACTGCTGGCACAAGCAGTGACTGTT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGTCCCATTCTTTGCATaGTCCAATTCTTGTTATCTT +
Preference number: 2 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGVPFFA*SNSCYL
Trigger: AAGATAACAAGAATTGGAGCATGCAAAGAATGGGAC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAATATTTTGTCTACCATTaGTCCTGGGGCTTAGTACCT +
Preference number: 2 (lower is better)
Translates to: TAQQSTATCPTTLVLETQYFVYH*SWGLVP
Trigger: AGGTACTAAGCCCCAGGACCAATGGTAGACAAAATA...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR TCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAAGTGTCAGGATCCTGTaGAACAGCATATCAAAAGAT +
Preference number: 2 (lower is better)
Translates to: TAQQSTATCPTTLVLETQSVRIL*NSISKD
Trigger: ATCTTTTGATATGCTGTTTCACAGGATCCTGACACT...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTCCCATTCTTTGCATaGTCCAATTCTTGTTATCTT +
Preference number: 2 (lower is better)
Translates to: TAQQSTATCPTTLVLETQVPFFA*SNSCYL
Trigger: AAGATAACAAGAATTGGAGCATGCAAAGAATGGGAC...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAGCACAGCCTTTAAAGTaGGGACCAGGAGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKAQPLK*GPGGRQ
Trigger: CTGCCTGCCTCCTGGTCCCCACTTTAAAGGCTGTGC...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAGTCTACCATTGGTCCTaGGGCTTAGTACCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKVYHWS*GLVPSP
Trigger: GGGGGAAGGTACTAAGCCCCAGGACCAATGGTAGAC...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTATATTTTGTCTACCATTaGTCCTGGGGCTTAGTACCT +
Preference number: 2 (lower is better)
Translates to: LKSLSKSHSLHAPILVILYFVYH*SWGLVP
Trigger: AGGTACTAAGCCCCAGGACCAATGGTAGACAAAATA...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAACTGTTACCATCAAAATaGTTGTTGCTGAGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKLLPSK*LLLSCV
Trigger: CACACAGCTCAGCAACAACCATTTTGATGGTAACAG...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR GCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAACCAAGTCCCATTCTTTaGATGCTCCAATTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKPSPIL*MLQFLL
Trigger: TAACAAGAATTGGAGCATGCAAAGAATGGGACTTGG...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAAAAAGCAACAGGATTTaGAGAGTTACTATTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LKSLSKSHSLHAPILVILKSNRI*RVTICC
Trigger: ACAGCAAATAGTAACTCTCCAAATCCTGTTGCTTTT...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAAAAAGCAACAGGATTTaGAGAGTTACTATTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPKSNRI*RVTICC
Trigger: ACAGCAAATAGTAACTCTCCAAATCCTGTTGCTTTT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCCAAACAGTCACTGCTaGTGCCAGCAGTGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGPNSHC*CQQWFS
Trigger: GGAAAACCACTGCTGGCACAAGCAGTGACTGTTTGG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCTTCACAGCTCTAAACTaGAAGCTGCCAAACAGTCAC +
Preference number: 3 (lower is better)
Translates to: AERLNAPRTAQQSTATCPFTALN*KLPNSH
Trigger: GTGACTGTTTGGCAGCTTCAAGTTTAGAGCTGTGAA...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAACCAAACAGTCACTGCTaGTGCCAGCAGTGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: TAQQSTATCPTTLVLETQPNSHC*CQQWFS
Trigger: GGAAAACCACTGCTGGCACAAGCAGTGACTGTTTGG...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCTTACCATCAAAATGGTaGTTGCTGAGCTGTGTGAGT +
Preference number: 3 (lower is better)
Translates to: AERLNAPRTAQQSTATCPLPSKW*LLSCVS
Trigger: ACTCACACAGCTCAGCAACAACCATTTTGATGGTAA...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTTTATTTTGTCTACCATaGGTCCTGGGGCTTAGTACC +
Preference number: 3 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGLFCLP*VLGLST
Trigger: GGTACTAAGCCCCAGGACCAATGGTAGACAAAATAA...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTTTCACAGCTCTAAACTaGAAGCTGCCAAACAGTCAC +
Preference number: 3 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGFTALN*KLPNSH
Trigger: GTGACTGTTTGGCAGCTTCAAGTTTAGAGCTGTGAA...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAATCCAAGTCCCATTCTTaGCATGCTCCAATTCTTGTT +
Preference number: 3 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCESKSHS*HAPILV
Trigger: AACAAGAATTGGAGCATGCAAAGAATGGGACTTGGA...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR TCA 72 bp TGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTaGAACAGCATATCAAAAGATCGCCAGCTTCTTATA +
Preference number: 3 (lower is better)
Translates to: CTRQLPSSVRIL*NSISKDRQLLI
Trigger: TATAAGAAGCTGGCGATCTTTTGATATGCTGTTTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTTATTTTGTCTACCATaGGTCCTGGGGCTTAGTACC +
Preference number: 3 (lower is better)
Translates to: STATCPTTLVLETQVMHKLFCLP*VLGLST
Trigger: GGTACTAAGCCCCAGGACCAATGGTAGACAAAATAA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTTCACAGCTCTAAACTaGAAGCTGCCAAACAGTCAC +
Preference number: 3 (lower is better)
Translates to: STATCPTTLVLETQVMHKFTALN*KLPNSH
Trigger: GTGACTGTTTGGCAGCTTCAAGTTTAGAGCTGTGAA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGTTACCATCAAAATGGTaGTTGCTGAGCTGTGTGAGT +
Preference number: 3 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRLPSKW*LLSCVS
Trigger: ACTCACACAGCTCAGCAACAACCATTTTGATGGTAA...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTATTATTTTGTCTACCATaGGTCCTGGGGCTTAGTACC +
Preference number: 3 (lower is better)
Translates to: LKSLSKSHSLHAPILVILLFCLP*VLGLST
Trigger: GGTACTAAGCCCCAGGACCAATGGTAGACAAAATAA...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAACATGTCCCACAACTTaGGTGCTGGAAACACAAGTA +
Preference number: 3 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKTCPTT*VLETQV
Trigger: TACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
3UTR-3UTR CAA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAATCCAAGTCCCATTCTTaGCATGCTCCAATTCTTGTT +
Preference number: 3 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKSKSHS*HAPILV
Trigger: AACAAGAATTGGAGCATGCAAAGAATGGGACTTGGA...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCCGAACCCTGGCCCACTaGCCGCAGCGGCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPRTLAH*PQRPEA
Trigger: AGCCTCCGGCCGCTGCGGCCAGTGGGCCAGGGTTCG...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR GCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCCGCGGCTCCTGGCTaGAGCGCCTCAGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGAAAPG*SASVST
Trigger: CGTGCTGACTGAGGCGCTGCAGCCAGGAGCCGCGGC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356644.7
CDS-3UTR CCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCGCAACCTTGCAGCGCTaGCTTTGGTGGGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPATLQR*LWWAEN
Trigger: ATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGC...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCACAGCCTTTAAAGTaGGGACCAGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGAQPLK*GPGGRQ
Trigger: CTGCCTGCCTCCTGGTCCCCACTTTAAAGGCTGTGC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGCCAAGTTCCTCGTCCTaGTCGCGGCCCCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKPSSSS*SRPPPH
Trigger: GTGCGGCGGGGGCCGCGACCAGGACGAGGAACTTGG...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356644.7
CDS-3UTR CCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGTCTACCATTGGTCCTaGGGCTTAGTACCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGVYHWS*GLVPSP
Trigger: GGGGGAAGGTACTAAGCCCCAGGACCAATGGTAGAC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCGCCTCATCTTTTCCATaGGGGCTTCAACCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPASSFP*GLQPQR
Trigger: TCTTTGAGGTTGAAGCCCTCATGGAAAAGATGAGGC...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCGGAGCACTGATGTCTTaGCGCAGCCATTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPGALMS*RSHYSN
Trigger: ATTGGAATAATGGCTGCGGCAAGACATCAGTGCTCC...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCAACAGTCACTGCTTGTaGCAGCAGTGGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPNSHCL*QQWFST
Trigger: TGTGGAAAACCACTGCTGGCACAAGCAGTGACTGTT...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCGAGGATCTCCTTTTCTaGGATGAATCTGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPEDLLF*DESAWS
Trigger: GGACCAAGCAGATTCATCCCAGAAAAGGAGATCCTC...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGCACAGCCTTTAAAGTaGGGACCAGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQAQPLK*GPGGRQ
Trigger: CTGCCTGCCTCCTGGTCCCCACTTTAAAGGCTGTGC...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAGCACAGCCTTTAAAGTaGGGACCAGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEAQPLK*GPGGRQ
Trigger: CTGCCTGCCTCCTGGTCCCCACTTTAAAGGCTGTGC...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCGATATCCTCACGTTGTaGAGCTGTCAAATCCGTGCT +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPDILTL*SCQIRA
Trigger: AGCACGGATTTGACAGCTCCACAACGTGAGGATATC...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAGCCGAATGTGAATaGGGCAAGAGAATGATAGTG +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPTAECE*GKRMIV
Trigger: CACTATCATTCTCTTGCCTCATTCACATTCGGCTGT...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCTGGCCACCATCACAATaGATTTCTGGACTGATTCCA +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPWPPSQ*ISGLIP
Trigger: TGGAATCAGTCCAGAAATTCATTGTGATGGTGGCCA...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCAGAAACATTTTCTGCTaGGTTGACCGGCATCTCATC +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPRNIFC*VDRHLI
Trigger: GATGAGATGCCGGTCAACTCAGCAGAAAATGTTTCT...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCCTTCTCAGAGTGCTTaGACTGCCTCCAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGPSQSA*TASRSY
Trigger: ATAGCTTCTGGAGGCAGTTCAAGCACTCTGAGAAGG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCCGACATTCCTGTAACTaGCTCATCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPRHSCN*LIFSMR
Trigger: CCTCATGGAAAAGATGAGGCAGTTACAGGAATGTCG...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAGTCTACCATTGGTCCTaGGGCTTAGTACCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEVYHWS*GLVPSP
Trigger: GGGGGAAGGTACTAAGCCCCAGGACCAATGGTAGAC...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGAAGCCATCTCTTCCTaGCTTGCCTCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGEAISS*LASSSS
Trigger: AGATGAAGAAGAGGCAAGTCAGGAAGAGATGGCTTC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGAGGATCTCCTTTTCTaGGATGAATCTGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGEDLLF*DESAWS
Trigger: GGACCAAGCAGATTCATCCCAGAAAAGGAGATCCTC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAAGGCTCGCCGAACCCTaGCCCACTGGCCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPRLAEP*PTGRSG
Trigger: GCCGCTGCGGCCAGTGGGCCAGGGTTCGGCGAGCCT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAATCTCCTTTTCTGGGATaGATCTGCTTGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQSPFLG*ICLVPV
Trigger: GACAGGGACCAAGCAGATTCATCCCAGAAAAGGAGA...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTTTCCACAGCCGAATGTaGATGAGGCAAGAGAATGAT +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGFHSRM*MRQEND
Trigger: ATCATTCTCTTGCCTCATTCACATTCGGCTGTGGAA...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCTTCTATTTCAAAACGTaGAGCCATCTCTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPFYFKT*SHLFLT
Trigger: AGTCAGGAAGAGATGGCTTCACGTTTTGAAATAGAA...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAACCTTCTCAGAGTGCTTaGACTGCCTCCAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQPSQSA*TASRSY
Trigger: ATAGCTTCTGGAGGCAGTTCAAGCACTCTGAGAAGG...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCAGTGTCAGGATCCTGTaGAACAGCATATCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: AERLNAPRTAQQSTATCPSVRIL*NSISKD
Trigger: ATCTTTTGATATGCTGTTTCACAGGATCCTGACACT...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAATGTCTCCCTAGTAGTTaGATCTCTGCTGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCECLPSS*ISAAES
Trigger: GGACTCTGCAGCAGAGATTCAACTACTAGGGAGACA...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR GCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCAAGGGACCAGCTGTaGTCTTCAGCTTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGARDQL*SSAFKS
Trigger: ACTTTTAAAAGCTGAAGAGCACAGCTGGTCCCTTGC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAATCTTCACTCCCCACTTaGAGGATCTCCTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQSSLPT*RISFSG
Trigger: CCCAGAAAAGGAGATCCTCCAAGTGGGGAGTGAAGA...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAGACATTTGGAACCACTaGTGCCTTCAGCCGATCTAC +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEDIWNH*CLQPIY
Trigger: GTAGATCGGCTGAAGGCACCAGTGGTTCCAAATGTC...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAAGGAGGCAAAGGGGATaGAGGTGGCTAAATAATCTG +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCERRQRG*RWLNNL
Trigger: CAGATTATTTAGCCACCTTCATCCCCTTTGCCTCCT...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302071.6
CDS-3UTR TCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGCCTCATCTTTTCCATaGGGGCTTCAACCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQASSFP*GLQPQR
Trigger: TCTTTGAGGTTGAAGCCCTCATGGAAAAGATGAGGC...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGCAGAGGCAGAGAGACTaGATGCACCCAGGACTGCGC +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLQRQRD*MHPGLR
Trigger: GCGCAGTCCTGGGTGCATTCAGTCTCTCTGCCTCTG...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGAATGCACAAGACAGCTaGCCTCCAGTGTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRNAQDS*PPVSGS
Trigger: GGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAATTTGGAACCACTGGTaGCTTCAGCCGATCTACAAG +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQIWNHW*LQPIYK
Trigger: CTTGTAGATCGGCTGAAGGCACCAGTGGTTCCAAAT...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCAACTGTCCCACATCTaGATAAAGGCGATTTACCAA +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGQLSHI*IKAIYQ
Trigger: TTGGTAAATCGCCTTTATCCAGATGTGGGACAGTTG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTTGCAGCGCTGGCTTTaGTGGGCAGAGAATTTCGGG +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKLQRWL*WAENFG
Trigger: CCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
3UTR CAA 72 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTaGGTGCTGGAAACACAAGTAATGCACAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTT*VLETQVMHKTA
Trigger: AGCTGTCTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAATGGCCACCATCACAATaGATTTCTGGACTGATTCCA +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQWPPSQ*ISGLIP
Trigger: TGGAATCAGTCCAGAAATTCATTGTGATGGTGGCCA...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTTTCTATTTCAAAACGTaGAGCCATCTCTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGFYFKT*SHLFLT
Trigger: AGTCAGGAAGAGATGGCTTCACGTTTTGAAATAGAA...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAATACTTCTCCGATCCCTaGGCCCTCGCCCACCACCGC +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKYFSDP*ALAHHR
Trigger: GCGGTGGTGGGCGAGGGCTCAGGGATCGGAGAAGTA...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR GCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAGCAAGGGACCAGCTGTaGTCTTCAGCTTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEARDQL*SSAFKS
Trigger: ACTTTTAAAAGCTGAAGAGCACAGCTGGTCCCTTGC...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGCTGCCAAACAGTCACTaGTTGTGCCAGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRLPNSH*LCQQWF
Trigger: AAACCACTGCTGGCACAAGCAGTGACTGTTTGGCAG...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCCAAGTCCCATTCTTTaGATGCTCCAATTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGPSPIL*MLQFLL
Trigger: TAACAAGAATTGGAGCATGCAAAGAATGGGACTTGG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTTATTATTTAAGGAGCTaGACAGCCTTTAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGYYLRS*TAFKVG
Trigger: CCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATA...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAACTGGACACGAAATGTTaGAACATGCATCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQLDTKC*NMHPMS
Trigger: AGACATGGGATGCATGTTCCAACATTTCGTGTCCAG...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTCTCCTTTTCTGGGATaGATCTGCTTGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKSPFLG*ICLVPV
Trigger: GACAGGGACCAAGCAGATTCATCCCAGAAAAGGAGA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGCTGCCAAACAGTCACTaGTTGTGCCAGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKLPNSH*LCQQWF
Trigger: AAACCACTGCTGGCACAAGCAGTGACTGTTTGGCAG...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAACAACTGTCCCACATCTaGATAAAGGCGATTTACCAA +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEQLSHI*IKAIYQ
Trigger: TTGGTAAATCGCCTTTATCCAGATGTGGGACAGTTG...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAACTGTTACCATCAAAATaGTTGTTGCTGAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCELLPSK*LLLSCV
Trigger: CACACAGCTCAGCAACAACCATTTTGATGGTAACAG...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAATTCTATTTCAAAACGTaGAGCCATCTCTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQFYFKT*SHLFLT
Trigger: AGTCAGGAAGAGATGGCTTCACGTTTTGAAATAGAA...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAACAGAGGCAGAGAGACTaGATGCACCCAGGACTGCGC +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKQRQRD*MHPGLR
Trigger: GCGCAGTCCTGGGTGCATTCAGTCTCTCTGCCTCTG...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAATGGAAAAACAAAGTTTaGAAGTTGCAACCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEWKNKV*KLQPCS
Trigger: GCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCA...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR GCA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAATATTATTTAAGGAGCTaGACAGCCTTTAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TAQQSTATCPTTLVLETQYYLRS*TAFKVG
Trigger: CCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATA...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGGTCAAATCCGTGCTCTaGCCCAAAAGGCTGTTAACA +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKVKSVL*PKRLLT
Trigger: TGTTAACAGCCTTTTGGGGCAGAGCACGGATTTGAC...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTTCCACAGCCGAATGTaGATGAGGCAAGAGAATGAT +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKFHSRM*MRQEND
Trigger: ATCATTCTCTTGCCTCATTCACATTCGGCTGTGGAA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTGGCCACCATCACAATaGATTTCTGGACTGATTCCA +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKWPPSQ*ISGLIP
Trigger: TGGAATCAGTCCAGAAATTCATTGTGATGGTGGCCA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGTCTGCAAATAAAGCATaGATCTGTGCGTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRSANKA*ICASSL
Trigger: GAGTGAAGACGCACAGATGCATGCTTTATTTGCAGA...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAGTCCCATTCTTTGCATaGTCCAATTCTTGTTATCTT +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEVPFFA*SNSCYL
Trigger: AAGATAACAAGAATTGGAGCATGCAAAGAATGGGAC...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGTCTTCACTCCCCACTTaGAGGATCTCCTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLSSLPT*RISFSG
Trigger: CCCAGAAAAGGAGATCCTCCAAGTGGGGAGTGAAGA...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAATAAGCCAAGGTCTATaGGCTAACACTTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEISQGL*ANTLLS
Trigger: ACTTAACAAAGTGTTAGCCCATAGACCTTGGCTTAT...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGTATTTTGTCTACCATTaGTCCTGGGGCTTAGTACCT +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRYFVYH*SWGLVP
Trigger: AGGTACTAAGCCCCAGGACCAATGGTAGACAAAATA...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGCTGTTACCATCAAAATaGTTGTTGCTGAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRLLPSK*LLLSCV
Trigger: CACACAGCTCAGCAACAACCATTTTGATGGTAACAG...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGCATCTGGGTGACATTTaGAACCACTGGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLHLGDI*NHWCLQ
Trigger: CTGAAGGCACCAGTGGTTCCAAATGTCACCCAGATG...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGATCTCATCCACACTGTaGTTGCCATTTGTAATGTCA +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRISSTL*LPFVMS
Trigger: TGACATTACAAATGGCAATCACAGTGTGGATGAGAT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTCTGCAAATAAAGCATaGATCTGTGCGTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKSANKA*ICASSL
Trigger: GAGTGAAGACGCACAGATGCATGCTTTATTTGCAGA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGAACAGTCACTGCTTGTaGCAGCAGTGGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLNSHCL*QQWFST
Trigger: TGTGGAAAACCACTGCTGGCACAAGCAGTGACTGTT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGATCACAATGAATTTCTaGACTGATTCCACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRITMNF*TDSTAE
Trigger: TTCGGCTGTGGAATCAGTCCAGAAATTCATTGTGAT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGAGATACAGCTCTTGCTaGTGTAACTTCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRRYSSC*CNFFII
Trigger: GATGATGAAGAAGTTACACCAGCAAGAGCTGTATCT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGCAACTGTCCCACATCTaGATAAAGGCGATTTACCAA +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKQLSHI*IKAIYQ
Trigger: TTGGTAAATCGCCTTTATCCAGATGTGGGACAGTTG...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAGTCTACCATTGGTCCTaGGGCTTAGTACCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILVYHWS*GLVPSP
Trigger: GGGGGAAGGTACTAAGCCCCAGGACCAATGGTAGAC...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTATTTTGTCTACCATTaGTCCTGGGGCTTAGTACCT +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKYFVYH*SWGLVP
Trigger: AGGTACTAAGCCCCAGGACCAATGGTAGACAAAATA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGCTGTTACCATCAAAATaGTTGTTGCTGAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKLLPSK*LLLSCV
Trigger: CACACAGCTCAGCAACAACCATTTTGATGGTAACAG...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAGTCTCGCGGGGTCAGTaGATATCCTCACGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKVSRGQ*ISSRCG
Trigger: TCCACAACGTGAGGATATCCACTGACCCCGCGAGAC...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAACAGCGCTGGCTTTGGTaGGCAGAGAATTTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKQRWLW*AENFGE
Trigger: TTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTG...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGATGAAAACACACATCTaGGTGACATTTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRMKTHI*VTFGTT
Trigger: AGTGGTTCCAAATGTCACCCAGATGTGTGTTTTCAT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGGAGAATGATAGTGTGTaGGTAAAACTACTGCATGTA +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRENDSV*VKLLHV
Trigger: TACATGCAGTAGTTTTACTCACACACTATCATTCTC...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGAGAAACATTTTCTGCTaGGTTGACCGGCATCTCATC +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLRNIFC*VDRHLI
Trigger: GATGAGATGCCGGTCAACTCAGCAGAAAATGTTTCT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGCGACATTCCTGTAACTaGCTCATCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLRHSCN*LIFSMR
Trigger: CCTCATGGAAAAGATGAGGCAGTTACAGGAATGTCG...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAAATGCACAAGACAGCTaGCCTCCAGTGTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKNAQDS*PPVSGS
Trigger: GGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAAATGCACAAGACAGCTaGCCTCCAGTGTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPNAQDS*PPVSGS
Trigger: GGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGATAAGCCAAGGTCTATaGGCTAACACTTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRISQGL*ANTLLS
Trigger: ACTTAACAAAGTGTTAGCCCATAGACCTTGGCTTAT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGATCACAATGAATTTCTaGACTGATTCCACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKITMNF*TDSTAE
Trigger: TTCGGCTGTGGAATCAGTCCAGAAATTCATTGTGAT...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTATCTCCTTTTCTGGGATaGATCTGCTTGGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILSPFLG*ICLVPV
Trigger: GACAGGGACCAAGCAGATTCATCCCAGAAAAGGAGA...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTACCTTCTCAGAGTGCTTaGACTGCCTCCAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILPSQSA*TASRSY
Trigger: ATAGCTTCTGGAGGCAGTTCAAGCACTCTGAGAAGG...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCACCGTCTGATGGACGATaGGGTGTTTCTTTCACCGAA +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPPSDGR*GVSFTE
Trigger: TTCGGTGAAAGAAACACCTCATCGTCCATCAGACGG...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCACTGCCAAACAGTCACTaGTTGTGCCAGCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPLPNSH*LCQQWF
Trigger: AAACCACTGCTGGCACAAGCAGTGACTGTTTGGCAG...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGAAAAGCAACAGGATTTaGAGAGTTACTATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRKSNRI*RVTICC
Trigger: ACAGCAAATAGTAACTCTCCAAATCCTGTTGCTTTT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAGGGTCCCCACCAACATaGAGGAAATCATTTACATGC +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKGSPPT*RKSFTC
Trigger: GCATGTAAATGATTTCCTTCATGTTGGTGGGGACCC...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAGCCTCATCTTTTCCATaGGGGCTTCAACCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKASSFP*GLQPQR
Trigger: TCTTTGAGGTTGAAGCCCTCATGGAAAAGATGAGGC...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAGAAGCCATCTCTTCCTaGCTTGCCTCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILEAISS*LASSSS
Trigger: AGATGAAGAAGAGGCAAGTCAGGAAGAGATGGCTTC...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAGGAGCACTGATGTCTTaGCGCAGCCATTATTCCAAT +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPGALMS*RSHYSN
Trigger: ATTGGAATAATGGCTGCGGCAAGACATCAGTGCTCC...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGAGCATAAAGGAGTTCTaGTTGCATCCTAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLSIKEF*LHPSFY
Trigger: ATAGAAGCTAGGATGCAAGCAGAACTCCTTTATGCT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAAACAGTCACTGCTTGTaGCAGCAGTGGTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKNSHCL*QQWFST
Trigger: TGTGGAAAACCACTGCTGGCACAAGCAGTGACTGTT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAGAGGATCTCCTTTTCTaGGATGAATCTGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPEDLLF*DESAWS
Trigger: GGACCAAGCAGATTCATCCCAGAAAAGGAGATCCTC...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGAAAAGCAACAGGATTTaGAGAGTTACTATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: STATCPTTLVLETQVMHKKSNRI*RVTICC
Trigger: ACAGCAAATAGTAACTCTCCAAATCCTGTTGCTTTT...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGCTAATGCCAAGTTCCTaGATGCTCTTCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLLMPSS*MLFRIN
Trigger: GTTTATTCTGAAGAGCATCCAGGAACTTGGCATTAG...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAACAGCCGAATGTGAATaGGGCAAGAGAATGATAGTG +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPTAECE*GKRMIV
Trigger: CACTATCATTCTCTTGCCTCATTCACATTCGGCTGT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAACAGCCGAATGTGAATaGGGCAAGAGAATGATAGTG +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKTAECE*GKRMIV
Trigger: CACTATCATTCTCTTGCCTCATTCACATTCGGCTGT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCATTCCACAGCCGAATGTaGATGAGGCAAGAGAATGAT +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPFHSRM*MRQEND
Trigger: ATCATTCTCTTGCCTCATTCACATTCGGCTGTGGAA...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAAGAAACATTTTCTGCTaGGTTGACCGGCATCTCATC +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPRNIFC*VDRHLI
Trigger: GATGAGATGCCGGTCAACTCAGCAGAAAATGTTTCT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAATGCCCGTCTAAGCATTaGGGTATCAACATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKCPSKH*GINIFV
Trigger: CACAAAGATGTTGATACCTCAATGCTTAGACGGGCA...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTATGCCCGTCTAAGCATTaGGGTATCAACATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILCPSKH*GINIFV
Trigger: CACAAAGATGTTGATACCTCAATGCTTAGACGGGCA...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTACGACATTCCTGTAACTaGCTCATCTTTTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILRHSCN*LIFSMR
Trigger: CCTCATGGAAAAGATGAGGCAGTTACAGGAATGTCG...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGGTCCCATTCTTTGCATaGTCCAATTCTTGTTATCTT +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLVPFFA*SNSCYL
Trigger: AAGATAACAAGAATTGGAGCATGCAAAGAATGGGAC...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAACAAAGTTTGAAAGTTaGAACCTTGCAGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKTKFES*NLAALA
Trigger: AGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCACTGGACACGAAATGTTaGAACATGCATCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPLDTKC*NMHPMS
Trigger: AGACATGGGATGCATGTTCCAACATTTCGTGTCCAG...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTACTGGACACGAAATGTTaGAACATGCATCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILLDTKC*NMHPMS
Trigger: AGACATGGGATGCATGTTCCAACATTTCGTGTCCAG...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCATCTGCAAATAAAGCATaGATCTGTGCGTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPSANKA*ICASSL
Trigger: GAGTGAAGACGCACAGATGCATGCTTTATTTGCAGA...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCATATTTTGTCTACCATTaGTCCTGGGGCTTAGTACCT +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPYFVYH*SWGLVP
Trigger: AGGTACTAAGCCCCAGGACCAATGGTAGACAAAATA...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGAAAAGCAACAGGATTTaGAGAGTTACTATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLKSNRI*RVTICC
Trigger: ACAGCAAATAGTAACTCTCCAAATCCTGTTGCTTTT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATCTCATCCACACTGTaGTTGCCATTTGTAATGTCA +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPISSTL*LPFVMS
Trigger: TGACATTACAAATGGCAATCACAGTGTGGATGAGAT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAGAAAGCATAAGCAGATaGGCAAGTAGCTTATTCAAC +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILESISR*ASSLFN
Trigger: GTTGAATAAGCTACTTGCTCATCTGCTTATGCTTTC...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR GCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTACGAAATGTTGGAACATaGATCCCATGTCTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILRNVGT*IPCLEK
Trigger: TTTCTCTAGACATGGGATGCATGTTCCAACATTTCG...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCACGAAATGTTGGAACATaGATCCCATGTCTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPRNVGT*IPCLEK
Trigger: TTTCTCTAGACATGGGATGCATGTTCCAACATTTCG...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAAGCATAAAGGAGTTCTaGTTGCATCCTAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILSIKEF*LHPSFY
Trigger: ATAGAAGCTAGGATGCAAGCAGAACTCCTTTATGCT...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAAGCATAAAGGAGTTCTaGTTGCATCCTAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKSIKEF*LHPSFY
Trigger: ATAGAAGCTAGGATGCAAGCAGAACTCCTTTATGCT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR GCA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCACCAAGTCCCATTCTTTaGATGCTCCAATTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPPSPIL*MLQFLL
Trigger: TAACAAGAATTGGAGCATGCAAAGAATGGGACTTGG...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAATCACAATGAATTTCTaGACTGATTCCACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILITMNF*TDSTAE
Trigger: TTCGGCTGTGGAATCAGTCCAGAAATTCATTGTGAT...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAAGATACAGCTCTTGCTaGTGTAACTTCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKRYSSC*CNFFII
Trigger: GATGATGAAGAAGTTACACCAGCAAGAGCTGTATCT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR TCA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAGAGAATGATAGTGTGTaGGTAAAACTACTGCATGTA +
Preference number: 4 (lower is better)
Translates to: LKSLSKSHSLHAPILVILENDSV*VKLLHV
Trigger: TACATGCAGTAGTTTTACTCACACACTATCATTCTC...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CCA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAAATAAGCCAAGGTCTATaGGCTAACACTTTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKISQGL*ANTLLS
Trigger: ACTTAACAAAGTGTTAGCCCATAGACCTTGGCTTAT...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS TCA 90 bp CCCGCCAATTCGGCACCCCCGGGAAGACGCTACTTCTCCGATCCCTaGGCCCTCGCCCACCACCGCCGAGCCAGAGGGCACAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PANSAPPGRRYFSDP*ALAHHRRARGHRAA
Trigger: GGCCGCCCTGTGCCCTCTGGCTCGGCGGTGGTGGGCGAGGGCTCAGGGATCGGAGAAGTAGCGTCTTCCCGGGGGTGCCGAATTGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CCA 90 bp GCAGAGAATTTCGGGGAAGCGTTCTCCTCCGTCTCGCGGGGTCAGTaGATATCCTCACGTTGTGGAGCTGTCAAATCCGTGCTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: AENFGEAFSSVSRGQ*ISSRCGAVKSVLCP
Trigger: GGGGCAGAGCACGGATTTGACAGCTCCACAACGTGAGGATATCCACTGACCCCGCGAGACGGAGGAGAACGCTTCCCCGAAATTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCCATTCGGGGCTTTTTaGTCTGTGCAGCCACCGGGT +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGPFGAF*SVQPPG
Trigger: ACCCGGTGGCTGCACAGACAAAAAAGCCCCGAATGG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCCCTGGACACGAAATGTaGGAACATGCATCCCATGTC +
Preference number: 5 (lower is better)
Translates to: AERLNAPRTAQQSTATCPPGHEM*EHASHV
Trigger: GACATGGGATGCATGTTCCAACATTTCGTGTCCAGG...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS CCA 90 bp CTGGAAAAACAAAGTTTGAAAGTTGCAACCTTGCAGCGCTGGCTTTaGTGGGCAGAGAATTTCGGGGAAGCGTTCTCCTCCGTCTCGCGG +
Preference number: 5 (lower is better)
Translates to: LEKQSLKVATLQRWL*WAENFGEAFSSVSR
Trigger: CCGCGAGACGGAGGAGAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCATTCTCTAAACCATaGAGCCACTTGGGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGAFSKP*SHLGSP
Trigger: TGGGGACCCCAAGTGGCTCAATGGTTTAGAGAATGC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACATTTTCTGCTGAGTaGACCGGCATCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: AERLNAPRTAQQSTATCPTFSAE*TGISST
Trigger: TGTGGATGAGATGCCGGTCAACTCAGCAGAAAATGT...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCCATCTCTTCCTGACTaGCCTCTTCTTCATCTCGAC +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGPSLPD*PLLHLD
Trigger: GTCGAGATGAAGAAGAGGCAAGTCAGGAAGAGATGG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGTGGATATCCTCACGTaGTGGAGCTGTCAAATCCGT +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGVDILT*WSCQIR
Trigger: ACGGATTTGACAGCTCCACAACGTGAGGATATCCAC...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAACCTCTCACCCTCTCCTaGTACACGAAAGGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: TAQQSTATCPTTLVLETQPLTLS*YTKGQS
Trigger: AGACTGCCCTTTCGTGTACAAGGAGAGGGTGAGAGG...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS GCA 90 bp AATCGTCATGAAAACACACATCTGGGTGACATTTGGAACCACTGGTaGCTTCAGCCGATCTACAAGCTAGGTCACCCTCTCACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: NRHENTHLGDIWNHW*LQPIYKLGHPLTLS
Trigger: GGAGAGGGTGAGAGGGTGACCTAGCTTGTAGATCGGCTGAAGGCACCAGTGGTTCCAAATGTCACCCAGATGTGTGTTTTCATGACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTCTTCACTCCCCACTaGGAGGATCTCCTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: TAQQSTATCPTTLVLETQVFTPH*EDLLFW
Trigger: CCAGAAAAGGAGATCCTCCAAGTGGGGAGTGAAGAC...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAGCATTCTCTAAACCATaGAGCCACTTGGGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEAFSKP*SHLGSP
Trigger: TGGGGACCCCAAGTGGCTCAATGGTTTAGAGAATGC...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAACCAAACAGTCACTGCTaGTGCCAGCAGTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEPNSHC*CQQWFS
Trigger: GGAAAACCACTGCTGGCACAAGCAGTGACTGTTTGG...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAAGGAGCACTGATGTCTaGCCGCAGCCATTATTCCAA +
Preference number: 5 (lower is better)
Translates to: TAQQSTATCPTTLVLETQRSTDV*PQPLFQ
Trigger: TTGGAATAATGGCTGCGGCAAGACATCAGTGCTCCT...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS CCA 90 bp TTCTTTCTGGAAAAACAAAGTTTGAAAGTTGCAACCTTGCAGCGCTaGCTTTGGTGGGCAGAGAATTTCGGGGAAGCGTTCTCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: FFLEKQSLKVATLQR*LWWAENFGEAFSSV
Trigger: GACGGAGGAGAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCCCTCAATGTGTTCTTaGGTAATAAGCCAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGPSMCS*VISQGL
Trigger: TAGACCTTGGCTTATTACCAAAGAACACATTGAGGG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAAACATTTTCTGCTGAGTaGACCGGCATCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCETFSAE*TGISST
Trigger: TGTGGATGAGATGCCGGTCAACTCAGCAGAAAATGT...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GCAGAGAGACTGAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCGAGGTATCAACATCTTaGTGCATTGCCATTGTATTA +
Preference number: 5 (lower is better)
Translates to: AERLNAPRTAQQSTATCPEVSTS*CIAIVL
Trigger: TAATACAATGGCAATGCACAAAGATGTTGATACCTC...GGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTCAGTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGTTGAAAGTTGCAACCTaGCAGCGCTGGCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRLKVAT*QRWLWW
Trigger: CCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAA...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTTTCTCTCTCACATCTTaGAAGGGACACCTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGFSLTS*KGHLLE
Trigger: TTCTAAGAGGTGTCCCTTCAAAGATGTGAGAGAGAA...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS GCA 90 bp ACACGAAAGGGCAGTCTTCTTTCTGGAAAAACAAAGTTTGAAAGTTaGAACCTTGCAGCGCTGGCTTTGGTGGGCAGAGAATTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: TRKGSLLSGKTKFES*NLAALALVGREFRG
Trigger: TCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGAAAGAAGACTGCCCTTTCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGAGGAGCACTGATGTCTaGCCGCAGCCATTATTCCAA +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRRSTDV*PQPLFQ
Trigger: TTGGAATAATGGCTGCGGCAAGACATCAGTGCTCCT...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGCCATCTCTTCCTGACTaGCCTCTTCTTCATCTCGAC +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRPSLPD*PLLHLD
Trigger: GTCGAGATGAAGAAGAGGCAAGTCAGGAAGAGATGG...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp GGAAACACAAGTAATGCACAAGACAGCTGCCCTCCAGTGTCAGGATCCTGTGAATTCACAGCTCTAAACTaGAAGCTGCCAAACAGTCAC +
Preference number: 5 (lower is better)
Translates to: GNTSNAQDSCPPVSGSCEFTALN*KLPNSH
Trigger: GTGACTGTTTGGCAGCTTCAAGTTTAGAGCTGTGAA...TTCACAGGATCCTGACACTGGAGGGCAGCTGTCTTGTGCATTACTTGTGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS TCA 90 bp AACCCATCCGAAGACTCGGTATTTGAAAGCCCGTCTGATGGACGATaGGGTGTTTCTTTCACCGAACGAAGATACTCGGTTTTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: NPSEDSVFESPSDGR*GVSFTERRYSVFLK
Trigger: TTTGAGGAAAACCGAGTATCTTCGTTCGGTGAAAGAAACACCTCATCGTCCATCAGACGGGCTTTCAAATACCGAGTCTTCGGATGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp GAATGCACCCAGGACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTCTATGGGCTAACACTTaGTTAAGTTCTCCTAAATTC +
Preference number: 5 (lower is better)
Translates to: ECTQDCAAVYSNMSHNFGLWANT*LSSPKF
Trigger: GAATTTAGGAGAACTTAACAAAGTGTTAGCCCATAG...ACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGTCCTGGGTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGCCATCTCTTCCTGACTaGCCTCTTCTTCATCTCGAC +
Preference number: 5 (lower is better)
Translates to: STATCPTTLVLETQVMHKPSLPD*PLLHLD
Trigger: GTCGAGATGAAGAAGAGGCAAGTCAGGAAGAGATGG...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGGTCTTCACTCCCCACTaGGAGGATCTCCTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLVFTPH*EDLLFW
Trigger: CCAGAAAAGGAGATCCTCCAAGTGGGGAGTGAAGAC...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGGCATTCTCTAAACCATaGAGCCACTTGGGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLAFSKP*SHLGSP
Trigger: TGGGGACCCCAAGTGGCTCAATGGTTTAGAGAATGC...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAATAAAGGAGTTCTGCTaGCATCCTAGCTTCTATAAG +
Preference number: 5 (lower is better)
Translates to: TAQQSTATCPTTLVLETQIKEFC*HPSFYK
Trigger: CTTATAGAAGCTAGGATGCAAGCAGAACTCCTTTAT...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGTTCACAGCTCTAAACTaGAAGCTGCCAAACAGTCAC +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRFTALN*KLPNSH
Trigger: GTGACTGTTTGGCAGCTTCAAGTTTAGAGCTGTGAA...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGAGGAGCACTGATGTCTaGCCGCAGCCATTATTCCAA +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLRSTDV*PQPLFQ
Trigger: TTGGAATAATGGCTGCGGCAAGACATCAGTGCTCCT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp ACTGCGCAGCAGTCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAACTATGGGCTAACACTTaGTTAAGTTCTCCTAAATTC +
Preference number: 5 (lower is better)
Translates to: TAQQSTATCPTTLVLETQLWANT*LSSPKF
Trigger: GAATTTAGGAGAACTTAACAAAGTGTTAGCCCATAG...TTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGACTGCTGCGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGCCCTCAATGTGTTCTTaGGTAATAAGCCAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRPSMCS*VISQGL
Trigger: TAGACCTTGGCTTATTACCAAAGAACACATTGAGGG...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGCCTGGACACGAAATGTaGGAACATGCATCCCATGTC +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLPGHEM*EHASHV
Trigger: GACATGGGATGCATGTTCCAACATTTCGTGTCCAGG...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGTCCAAGTCCCATTCTTaGCATGCTCCAATTCTTGTT +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRSKSHS*HAPILV
Trigger: AACAAGAATTGGAGCATGCAAAGAATGGGACTTGGA...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCACTTGCAGCGCTGGCTTaGGTGGGCAGAGAATTTCGG +
Preference number: 5 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPLAALA*VGREFR
Trigger: CCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAG...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp TCTACAGCAACATGTCCCACAACTTTGGTGCTGGAAACACAAGTAATGCACAAGTTACCATCAAAATGGTaGTTGCTGAGCTGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: STATCPTTLVLETQVMHKLPSKW*LLSCVS
Trigger: ACTCACACAGCTCAGCAACAACCATTTTGATGGTAA...CTTGTGCATTACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGTTGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TTCCAGCTTTATTATTTAAGGAGCTGCACAGCCTTTAAAGTGGGGACCAGGAGGCTGGAAAAACAAAGTTaGAAAGTTGCAACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FQLYYLRSCTAFKVGTRRLEKQS*KVATLQ
Trigger: CTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAG...CCTCCTGGTCCCCACTTTAAAGGCTGTGCAGCTCCTTAAATAATAAAGCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS GCA 90 bp CACATGGTGCCTGGAATAGCATGCTGTAGGAATGGAGACATCATTTaGTATGCATTCATTAAGTGGACGTGGATAATCATGAAGATCTTC +
Preference number: 5 (lower is better)
Translates to: HMVPGIACCRNGDII*YAFIKWTWIIMKIF
Trigger: GAAGATCTTCATGATTATCCACGTCCACTTAATGAATGCATAGCAAATGATGTCTCCATTCCTACAGCATGCTATTCCAGGCACCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517548.1
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGTTATTTTGTCTACCATaGGTCCTGGGGCTTAGTACC +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLLFCLP*VLGLST
Trigger: GGTACTAAGCCCCAGGACCAATGGTAGACAAAATAA...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGACATGTCCCACAACTTaGGTGCTGGAAACACAAGTA +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLTCPTT*VLETQV
Trigger: TACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTACCGAAGACTCGGTATTaGAAAGCCCGTCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: LKSLSKSHSLHAPILVILPKTRY*KARLMD
Trigger: GTCCATCAGACGGGCTTTCAAATACCGAGTCTTCGG...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGTCCAAGTCCCATTCTTaGCATGCTCCAATTCTTGTT +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLSKSHS*HAPILV
Trigger: AACAAGAATTGGAGCATGCAAAGAATGGGACTTGGA...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGTTACCATCAAAATGGTaGTTGCTGAGCTGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLLPSKW*LLSCVS
Trigger: ACTCACACAGCTCAGCAACAACCATTTTGATGGTAA...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS TCA 90 bp CCTCTTCTTCATCTCGACATTCCTGTAACTGCCTCATCTTTTCCATaGGGGCTTCAACCTCAAAGAAAGAATCACTTACAGAAACATTTT +
Preference number: 5 (lower is better)
Translates to: PLLHLDIPVTASSFP*GLQPQRKNHLQKHF
Trigger: AAAATGTTTCTGTAAGTGATTCTTTCTTTGAGGTTGAAGCCCTCATGGAAAAGATGAGGCAGTTACAGGAATGTCGAGATGAAGAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000368971.2
ENST00000436639.6
CDS-3UTR CAA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAACATTTTCTGCTGAGTaGACCGGCATCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: LKSLSKSHSLHAPILVILTFSAE*TGISST
Trigger: TGTGGATGAGATGCCGGTCAACTCAGCAGAAAATGT...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGATAAAGGAGTTCTGCTaGCATCCTAGCTTCTATAAG +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLIKEFC*HPSFYK
Trigger: CTTATAGAAGCTAGGATGCAAGCAGAACTCCTTTAT...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TGTCAAAAAGCAAAATACTGTGAATGGCAGCCTGTCTTCACAGCTCTAAACTTGGAGGTATCAACATCTTaGTGCATTGCCATTGTATTA +
Preference number: 5 (lower is better)
Translates to: CQKAKYCEWQPVFTALNLEVSTS*CIAIVL
Trigger: TAATACAATGGCAATGCACAAAGATGTTGATACCTC...CAAGTTTAGAGCTGTGAAGACAGGCTGCCATTCACAGTATTTTGCTTTTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCATTATTTTGTCTACCATaGGTCCTGGGGCTTAGTACC +
Preference number: 5 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPLFCLP*VLGLST
Trigger: GGTACTAAGCCCCAGGACCAATGGTAGACAAAATAA...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTAACATGTCCCACAACTTaGGTGCTGGAAACACAAGTA +
Preference number: 5 (lower is better)
Translates to: LKSLSKSHSLHAPILVILTCPTT*VLETQV
Trigger: TACTTGTGTTTCCAGCACCAAAGTTGTGGGACATGT...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp AATACCAGTAATACTGACAGACTTCAAAAGCAATTCACGCTTCCAGAATACAAACCCTCAATGTGTTCTTaGGTAATAAGCCAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: NTSNTDRLQKQFTLPEYKPSMCS*VISQGL
Trigger: TAGACCTTGGCTTATTACCAAAGAACACATTGAGGG...TTTGTATTCTGGAAGCGTGAATTGCTTTTGAAGTCTGTCAGTATTACTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS GCA 90 bp AGAGTTACTAGTAATATATCAATTACAGCAAATGTACCACAGAAATaGTGTAACAGAAGAAAATGTGCATCTGTGGGAAGAGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: RVTSNISITANVPQK*CNRRKCASVGRDSG
Trigger: CCCTGAATCTCTTCCCACAGATGCACATTTTCTTCTGTTACAGCATTTCTGTGGTACATTTGCTGTAATTGATATATTACTAGTAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523632.1
CDS-3UTR CAA 90 bp TCTTTACATATAAAGCTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATAAAGGAGTTCTGCTaGCATCCTAGCTTCTATAAG +
Preference number: 5 (lower is better)
Translates to: SLHIKLKSLSKSHSLHAPIKEFC*HPSFYK
Trigger: CTTATAGAAGCTAGGATGCAAGCAGAACTCCTTTAT...TGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAGCTTTATATGTAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS-3UTR CAA 90 bp CTTAAGTCATTATCCAAGTCCCATTCTTTGCATGCTCCAATTCTTGTTATCTTACTATGGGCTAACACTTaGTTAAGTTCTCCTAAATTC +
Preference number: 5 (lower is better)
Translates to: LKSLSKSHSLHAPILVILLWANT*LSSPKF
Trigger: GAATTTAGGAGAACTTAACAAAGTGTTAGCCCATAG...TAAGATAACAAGAATTGGAGCATGCAAAGAATGGGACTTGGATAATGACTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS CCA 72 bp CGAACCCTGGCCCACTGGCCGCAGCGGCCGGAGGCTTaGGCGCTGTCGGAGGGCGGCAGTCTCGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RTLAHWPQRPEA*ALSEGGSLGQP
Trigger: CGGCTGCCCGAGACTGCCGCCCTCCGACAGCGCCCAAGCCTCCGGCCGCTGCGGCCAGTGGGCCAGGGTTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 72 bp CCGAACCCTGGCCCACTGGCCGCAGCGGCCGGAGGCTaGGGCGCTGTCGGAGGGCGGCAGTCTCGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: PNPGPLAAAAGG*GAVGGRQSRAA
Trigger: GGCTGCCCGAGACTGCCGCCCTCCGACAGCGCCCAAGCCTCCGGCCGCTGCGGCCAGTGGGCCAGGGTTCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 90 bp GAAGGCTCGCCGAACCCTGGCCCACTGGCCGCAGCGGCCGGAGGCTaGGGCGCTGTCGGAGGGCGGCAGTCTCGGGCAGCCGTAGTCTCG +
Preference number: 6 (lower is better)
Translates to: EGSPNPGPLAAAAGG*GAVGGRQSRAAVVS
Trigger: CGAGACTACGGCTGCCCGAGACTGCCGCCCTCCGACAGCGCCCAAGCCTCCGGCCGCTGCGGCCAGTGGGCCAGGGTTCGGCGAGCCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS TCA 72 bp TCGGCACCCCCGGGAAGACGCTACTTCTCCGATCCCTaGGCCCTCGCCCACCACCGCCGAGCCAGAGGGCAC +
Preference number: 6 (lower is better)
Translates to: SAPPGRRYFSDP*ALAHHRRARGH
Trigger: GTGCCCTCTGGCTCGGCGGTGGTGGGCGAGGGCTCAGGGATCGGAGAAGTAGCGTCTTCCCGGGGGTGCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CCA 72 bp TTCGGGGAAGCGTTCTCCTCCGTCTCGCGGGGTCAGTaGATATCCTCACGTTGTGGAGCTGTCAAATCCGTG +
Preference number: 6 (lower is better)
Translates to: FGEAFSSVSRGQ*ISSRCGAVKSV
Trigger: CACGGATTTGACAGCTCCACAACGTGAGGATATCCACTGACCCCGCGAGACGGAGGAGAACGCTTCCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CCA 72 bp AGTTTGAAAGTTGCAACCTTGCAGCGCTGGCTTTGGTaGGCAGAGAATTTCGGGGAAGCGTTCTCCTCCGTC +
Preference number: 6 (lower is better)
Translates to: SLKVATLQRWLW*AENFGEAFSSV
Trigger: GACGGAGGAGAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS TCA 72 bp CTTCACTCCCCACTTGGAGGATCTCCTTTTCTGGGATaGATCTGCTTGGTCCCTGTCCTAGTGGTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: LHSPLGGSPFLG*ICLVPVLVVEE
Trigger: TTCCTCGACCACTAGGACAGGGACCAAGCAGATTCATCCCAGAAAAGGAGATCCTCCAAGTGGGGAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000436639.6
CDS CCA 72 bp CAAAGTTTGAAAGTTGCAACCTTGCAGCGCTGGCTTTaGTGGGCAGAGAATTTCGGGGAAGCGTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QSLKVATLQRWL*WAENFGEAFSS
Trigger: GGAGGAGAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 90 bp TCTGGAAAAACAAAGTTTGAAAGTTGCAACCTTGCAGCGCTGGCTTaGGTGGGCAGAGAATTTCGGGGAAGCGTTCTCCTCCGTCTCGCG +
Preference number: 6 (lower is better)
Translates to: SGKTKFESCNLAALA*VGREFRGSVLLRLA
Trigger: CGCGAGACGGAGGAGAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS GCA 72 bp GAAAACACACATCTGGGTGACATTTGGAACCACTGGTaGCTTCAGCCGATCTACAAGCTAGGTCACCCTCTC +
Preference number: 6 (lower is better)
Translates to: ENTHLGDIWNHW*LQPIYKLGHPL
Trigger: GAGAGGGTGACCTAGCTTGTAGATCGGCTGAAGGCACCAGTGGTTCCAAATGTCACCCAGATGTGTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 72 bp ACAAAGTTTGAAAGTTGCAACCTTGCAGCGCTGGCTTaGGTGGGCAGAGAATTTCGGGGAAGCGTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: TKFESCNLAALA*VGREFRGSVLL
Trigger: GAGGAGAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 72 bp CCGATCTACAAGCTAGGTCACCCTCTCACCCTCTCCTaGTACACGAAAGGGCAGTCTTCTTTCTGGAAAAAC +
Preference number: 6 (lower is better)
Translates to: PIYKLGHPLTLS*YTKGQSSFWKN
Trigger: GTTTTTCCAGAAAGAAGACTGCCCTTTCGTGTACAAGGAGAGGGTGAGAGGGTGACCTAGCTTGTAGATCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 90 bp AGGGCAGTCTTCTTTCTGGAAAAACAAAGTTTGAAAGTTGCAACCTaGCAGCGCTGGCTTTGGTGGGCAGAGAATTTCGGGGAAGCGTTC +
Preference number: 6 (lower is better)
Translates to: RAVFFLEKQSLKVAT*QRWLWWAENFGEAF
Trigger: GAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGAAAGAAGACTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CCA 72 bp GAAAAACAAAGTTTGAAAGTTGCAACCTTGCAGCGCTaGCTTTGGTGGGCAGAGAATTTCGGGGAAGCGTTC +
Preference number: 6 (lower is better)
Translates to: EKQSLKVATLQR*LWWAENFGEAF
Trigger: GAACGCTTCCCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 90 bp GCAGATGAGCAAGTAGCTTATTCAACCCATCCGAAGACTCGGTATTaGAAAGCCCGTCTGATGGACGATGAGGTGTTTCTTTCACCGAAC +
Preference number: 6 (lower is better)
Translates to: ADEQVAYSTHPKTRY*KARLMDDEVFLSPN
Trigger: GTTCGGTGAAAGAAACACCTCATCGTCCATCAGACGGGCTTTCAAATACCGAGTCTTCGGATGGGTTGAATAAGCTACTTGCTCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436639.6
ENST00000517548.1
CDS CAA 90 bp CTCCTTGTACACGAAAGGGCAGTCTTCTTTCTGGAAAAACAAAGTTaGAAAGTTGCAACCTTGCAGCGCTGGCTTTGGTGGGCAGAGAAT +
Preference number: 6 (lower is better)
Translates to: LLVHERAVFFLEKQS*KVATLQRWLWWAEN
Trigger: ATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGAAAGAAGACTGCCCTTTCGTGTACAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS TCA 72 bp GAAGACTCGGTATTTGAAAGCCCGTCTGATGGACGATaGGGTGTTTCTTTCACCGAACGAAGATACTCGGTT +
Preference number: 6 (lower is better)
Translates to: EDSVFESPSDGR*GVSFTERRYSV
Trigger: AACCGAGTATCTTCGTTCGGTGAAAGAAACACCTCATCGTCCATCAGACGGGCTTTCAAATACCGAGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS GCA 72 bp GGCAGTCTTCTTTCTGGAAAAACAAAGTTTGAAAGTTaGAACCTTGCAGCGCTGGCTTTGGTGGGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: GSLLSGKTKFES*NLAALALVGRE
Trigger: TTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGAAAGAAGACTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS TCA 72 bp ACAGAAGGAGGTCTGAATGTGTGGCCACCATCACAATaGATTTCTGGACTGATTCCACAGCCGAATGTGAAT +
Preference number: 6 (lower is better)
Translates to: TEGGLNVWPPSQ*ISGLIPQPNVN
Trigger: ATTCACATTCGGCTGTGGAATCAGTCCAGAAATTCATTGTGATGGTGGCCACACATTCAGACCTCCTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000368971.2
ENST00000436639.6
CDS CCA 72 bp TCAAATCGTCATGAAAACACACATCTGGGTGACATTTaGAACCACTGGTGCCTTCAGCCGATCTACAAGCTA +
Preference number: 6 (lower is better)
Translates to: SNRHENTHLGDI*NHWCLQPIYKL
Trigger: TAGCTTGTAGATCGGCTGAAGGCACCAGTGGTTCCAAATGTCACCCAGATGTGTGTTTTCATGACGATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 72 bp TTCTTTCTGGAAAAACAAAGTTTGAAAGTTGCAACCTaGCAGCGCTGGCTTTGGTGGGCAGAGAATTTCGGG +
Preference number: 6 (lower is better)
Translates to: FFLEKQSLKVAT*QRWLWWAENFG
Trigger: CCCGAAATTCTCTGCCCACCAAAGCCAGCGCTGCAAGGTTGCAACTTTCAAACTTTGTTTTTCCAGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436639.6
CDS CAA 72 bp CAAGTAGCTTATTCAACCCATCCGAAGACTCGGTATTaGAAAGCCCGTCTGATGGACGATGAGGTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: QVAYSTHPKTRY*KARLMDDEVFL
Trigger: AAGAAACACCTCATCGTCCATCAGACGGGCTTTCAAATACCGAGTCTTCGGATGGGTTGAATAAGCTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436639.6
ENST00000517548.1
CDS TCA 72 bp CTCAAAGAAAGAATCACTTACAGAAACATTTTCTGCTaGGTTGACCGGCATCTCATCCACACTGTGATTGCC +
Preference number: 6 (lower is better)
Translates to: LKERITYRNIFC*VDRHLIHTVIA
Trigger: GGCAATCACAGTGTGGATGAGATGCCGGTCAACTCAGCAGAAAATGTTTCTGTAAGTGATTCTTTCTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302071.6
ENST00000356644.7
ENST00000368971.2
ENST00000436639.6
CDS GCA 72 bp CCTGGAATAGCATGCTGTAGGAATGGAGACATCATTTaGTATGCATTCATTAAGTGGACGTGGATAATCATG +
Preference number: 6 (lower is better)
Translates to: PGIACCRNGDII*YAFIKWTWIIM
Trigger: CATGATTATCCACGTCCACTTAATGAATGCATAGCAAATGATGTCTCCATTCCTACAGCATGCTATTCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517548.1
CDS CCA 72 bp AGGAATGGAGACATCATTTGCTATGCATTCATTAAGTaGACGTGGATAATCATGAAGATCTTCATTCTTACG +
Preference number: 6 (lower is better)
Translates to: RNGDIICYAFIK*TWIIMKIFILT
Trigger: CGTAAGAATGAAGATCTTCATGATTATCCACGTCCACTTAATGAATGCATAGCAAATGATGTCTCCATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517548.1