RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000166401

Ensembl transcript IDs: ENST00000295211.5, ENST00000353706.6, ENST00000397985.7, ENST00000397988.7, ENST00000441827.5, ENST00000493661.2, ENST00000542677.5, ENST00000636430.1

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGGCTGCAGCTTTACTCTATAGGGTTTGCCCTTGGCTTTGTGTaGAGTGTCACCTGGGCACTAGTCCCCTGTTCAGCCTGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: GWLQLYSIGFALGFV*SVTWALVPCSAWQW
Trigger: CCACTGCCAGGCTGAACAGGGGACTAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAAAGCTGCAGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR GCA 90 bp CAGAGCCGGGCGGATGGAAGAGGGCTGGCTCCTGAAGCCCTGAGATaGTCCATAAGATCCCCTGAAACAATGGGCACAGACTTAGGTGAA +
Preference number: 1 (lower is better)
Translates to: QSRADGRGLAPEALR*SIRSPETMGTDLGE
Trigger: TTCACCTAAGTCTGTGCCCATTGTTTCAGGGGATCTTATGGAGCATCTCAGGGCTTCAGGAGCCAGCCCTCTTCCATCCGCCCGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR GCA 90 bp CTGCACATGAGACACAGGGTGGCTGCAGCTTTACTCTATAGGGTTTaGCCTTGGCTTTGTGTGCAGTGTCACCTGGGCACTAGTCCCCTG +
Preference number: 1 (lower is better)
Translates to: LHMRHRVAAALLYRV*PWLCVQCHLGTSPL
Trigger: CAGGGGACTAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAAAGCTGCAGCCACCCTGTGTCTCATGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 90 bp ATGAGACACAGGGTGGCTGCAGCTTTACTCTATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCACCTGGGCACTAGTCCCCTGTTCAGC +
Preference number: 1 (lower is better)
Translates to: MRHRVAAALLYRVCP*LCVQCHLGTSPLFS
Trigger: GCTGAACAGGGGACTAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAAAGCTGCAGCCACCCTGTGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR TCA 90 bp GTCTATGTGACAGTGACAGAAGCAGATCACTATTTCAGCTGCACATaGGACACAGGGTGGCTGCAGCTTTACTCTATAGGGTTTGCCCTT +
Preference number: 1 (lower is better)
Translates to: VYVTVTEADHYFSCT*DTGWLQLYSIGFAL
Trigger: AAGGGCAAACCCTATAGAGTAAAGCTGCAGCCACCCTGTGTCTCATGTGCAGCTGAAATAGTGATCTGCTTCTGTCACTGTCACATAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 90 bp GCCCAAATTTCATGCATCTGCGGCCTCAGTTATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTTTCACACACTATCCAGTGCACACGC +
Preference number: 1 (lower is better)
Translates to: AQISCICGLSYSQWL*NFQQRLSHTIQCTR
Trigger: GCGTGTGCACTGGATAGTGTGTGAAAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAGGCCGCAGATGCATGAAATTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 90 bp TCCCAGGCCCAAATTTCATGCATCTGCGGCCTCAGTTATTCTCAATaGCTCTGGAACTTTCAGCAAAGACTTTCACACACTATCCAGTGC +
Preference number: 1 (lower is better)
Translates to: SQAQISCICGLSYSQ*LWNFQQRLSHTIQC
Trigger: GCACTGGATAGTGTGTGAAAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAGGCCGCAGATGCATGAAATTTGGGCCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR TCA 90 bp TGCATTGCTGAGTCCCTGAACTTGTATCTCAGGCTTATGGAAAGATaGGAAGGAGCTGTCTTCATTACAAACTGTGTGAGACAGGGGGCA +
Preference number: 1 (lower is better)
Translates to: CIAESLNLYLRLMER*EGAVFITNCVRQGA
Trigger: TGCCCCCTGTCTCACACAGTTTGTAATGAAGACAGCTCCTTCTCATCTTTCCATAAGCCTGAGATACAAGTTCAGGGACTCAGCAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR GCA 90 bp CAATGGCTCTGGAACTTTCAGCAAAGACTTTCACACACTATCCAGTaGACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGT +
Preference number: 1 (lower is better)
Translates to: QWLWNFQQRLSHTIQ*TRFILAFKPLHQLG
Trigger: ACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGAAAGTCTTTGCTGAAAGTTCCAGAGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR TCA 90 bp AGATGTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTaGCTGGATGCAGGAGGCAAGAGTAAGGAGAAGTCTAAGATGACT +
Preference number: 1 (lower is better)
Translates to: RCISTHSTSRQGRQK*LDAGGKSKEKSKMT
Trigger: AGTCATCTTAGACTTCTCCTTACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATACATCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR CCA 90 bp TACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATaGCTCAGAACTCTGCTTCTGAGTCTAATGAGGGGACTATTCAGG +
Preference number: 1 (lower is better)
Translates to: YYCEWERLFDKRQRA*LRTLLLSLMRGLFR
Trigger: CCTGAATAGTCCCCTCATTAGACTCAGAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR CCA 90 bp TCAGACAGACTGGAATCACAGGAGGTAAATCAGATGAAGGCTGTATaGGGTGCAGCAGATGCAGGAATGGAAAATGTCTTTATTTTGAAA +
Preference number: 1 (lower is better)
Translates to: SDRLESQEVNQMKAV*GAADAGMENVFILK
Trigger: TTTCAAAATAAAGACATTTTCCATTCCTGCATCTGCTGCACCCCATACAGCCTTCATCTGATTTACCTCCTGTGATTCCAGTCTGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR TCA 90 bp CTACTGGAAAGTTGTGAACAGATGTATTGTTCAATTAGATTTCTGTaGTTGGTTCTGGCAATAATCTGGAGGATGGAGTCGAGGAGAAGT +
Preference number: 1 (lower is better)
Translates to: LLESCEQMYCSIRFL*LVLAIIWRMESRRS
Trigger: ACTTCTCCTCGACTCCATCCTCCAGATTATTGCCAGAACCAATCACAGAAATCTAATTGAACAATACATCTGTTCACAACTTTCCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR GCA 90 bp CAACATATAAATTTTGGTGGAAGACGGCATTCAGGTTATAGGACATaGTTAACTTTGCTTAGTGCAACGTTTGCTTCAACACTATTAGGC +
Preference number: 1 (lower is better)
Translates to: QHINFGGRRHSGYRT*LTLLSATFASTLLG
Trigger: GCCTAATAGTGTTGAAGCAAACGTTGCACTAAGCAAAGTTAAGCATGTCCTATAACCTGAATGCCGTCTTCCACCAAAATTTATATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR TCA 90 bp GGATTAATTTTGCCCAAACCTGCTTTGGAAAACATGATCCCTAAATaGATGTGGCCTAACAGATATATCCTGGCTTGGTCAAATTTAAGT +
Preference number: 1 (lower is better)
Translates to: GLILPKPALENMIPK*MWPNRYILAWSNLS
Trigger: ACTTAAATTTGACCAAGCCAGGATATATCTGTTAGGCCACATTCATTTAGGGATCATGTTTTCCAAAGCAGGTTTGGGCAAAATTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAGCCTGGCAGTGGTGGTaGGCAGAGCCGGGCGGATGG +
Preference number: 2 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAAWQWW*AEPGGW
Trigger: CCATCCGCCCGGCTCTGCCCACCACCACTGCCAGGC...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCTCCACGAAGCACTTGTaGGCAACCTTGGACAGAGGC +
Preference number: 2 (lower is better)
Translates to: RKGWSAQNLGSILLHREFSTKHL*ATLDRG
Trigger: GCCTCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGA...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR TCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATGCACCGGGAATTCCTaGCCACAGCAGTGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: FGIQATAPTRSQGMLIKACTGNS*PQQWLR
Trigger: CCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGATCAGCCTGGCAGTGGTaGTGGGCAGAGCCGGGCGGA +
Preference number: 2 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERSAWQW*WAEPGG
Trigger: TCCGCCCGGCTCTGCCCACCACCACTGCCAGGCTGA...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACAGGCCCAAATTTCATaGATCTGCGGCCTCAGTTAT +
Preference number: 2 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAQAQIS*ICGLSY
Trigger: ATAACTGAGGCCGCAGATGCATGAAATTTGGGCCTG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp GTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACCAGAAAAGTCTGCCTTaGCTTCGTCAAAAGCATCGA +
Preference number: 2 (lower is better)
Translates to: VVCTESWLHSAAPGIPDHQKSLP*LRQKHR
Trigger: TCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTG...GTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTGTTCAGCCTGGCAGTaGTGGTGGGCAGAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWCSAWQ*WWAEPG
Trigger: GCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGATGTTCAGCCTGGCAGTaGTGGTGGGCAGAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERCSAWQ*WWAEPG
Trigger: GCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACA...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAYRVCP*LCVQCH
Trigger: GTGACACTGCACACAAAGCCAAGGGCAAACCCTATA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGACCACAGCAGTGGCTaGGGCAGCCTCTGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIDHSSG*GSLCAF
Trigger: GAAGGCACAGAGGCTGCCGCAGCCACTGCTGTGGTC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCCTCAGTTATTCTCAATaGCTCTGGAACTTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIALSYSQ*LWNFQQ
Trigger: TTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAG...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTTGTTCAGCCTGGCAGTaGTGGTGGGCAGAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: REGCISLLTAVIAVCWNCCSAWQ*WWAEPG
Trigger: GCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACA...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AAGGAAGACAGAAGTGACTGGATGCAGGAGGCAAGAGTAAGGAGAAGTCTAAGATGGCACTCATGCATCTaGGCCGCCCTTGATCTTCAC +
Preference number: 2 (lower is better)
Translates to: KEDRSDWMQEARVRRSLRWHSCI*AALDLH
Trigger: GTGAAGATCAAGGGCGGCCCAGATGCATGAGTGCCA...TCTTAGACTTCTCCTTACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR TCA 90 bp CAGATTATGAGATGTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGCATCTGGGCCGCCCTTaGTCTTCACCCAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: QIMRCISTHSTSRQGRQKHLGRP*SSPSWC
Trigger: ACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATG...CTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATACATCTCATAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR GCA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCATTCCAGAAAAGTCTaGCTTGGCTTCGTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: RKGWSAQNLGSILLHREFHSRKV*LGFVKS
Trigger: GCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATG...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAYSQWL*NFQQRL
Trigger: AAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATA...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTTCAGCCTGGCAGTGGTaGTGGGCAGAGCCGGGCGGA +
Preference number: 2 (lower is better)
Translates to: LHTHNREGCISLLTAVIASAWQW*WAEPGG
Trigger: TCCGCCCGGCTCTGCCCACCACCACTGCCAGGCTGA...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 90 bp TGTGACAGTCATGATGTAGTTGGCACTCATGCATCTGGGCCGCCCTaGATCTTCACCCAGCTGGTGTTTGATCATAAATGGAGGTTAGAA +
Preference number: 2 (lower is better)
Translates to: CDSHDVVGTHASGPP*IFTQLVFDHKWRLE
Trigger: TTCTAACCTCCATTTATGATCAAACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATGCATGAGTGCCAACTACATCATGACTGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR TCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGGGCACAGACTTAGGTaGAGGCAGAGGCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIGHRLR*RQRQWQ
Trigger: CTGCCATTGCCTCTGCCTTCACCTAAGTCTGTGCCC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAGAGGGCTGGCTCCTaGAGCCCTGAGATGCTCCAT +
Preference number: 2 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWKRAGS*SPEMLH
Trigger: ATGGAGCATCTCAGGGCTTCAGGAGCCAGCCCTCTT...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGAGGGCTGGCTCCTaGAGCCCTGAGATGCTCCAT +
Preference number: 2 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIKRAGS*SPEMLH
Trigger: ATGGAGCATCTCAGGGCTTCAGGAGCCAGCCCTCTT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACAAATTTCATGCATCTaGGGCCTCAGTTATTCTCAA +
Preference number: 2 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAQISCI*GLSYSQ
Trigger: TTGAGAATAACTGAGGCCGCAGATGCATGAAATTTG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AGGACATCAATCCCATTTATGAGGGCTTTTTCCTCAGGACCTAATCACCTCCCATCACACATCCTCCTGTaGCACTTCCACAGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: RTSIPFMRAFSSGPNHLPSHILL*HFHSAC
Trigger: ACAAGCACTGTGGAAGTGCCACAGGAGGATGTGTGA...TGGGAGGTGATTAGGTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTCTCCATAAGATCCCCTaGAACAATGGGCACAGACTT +
Preference number: 2 (lower is better)
Translates to: TRFILAFKPLHQLGHRECLHKIP*NNGHRL
Trigger: AAGTCTGTGCCCATTGTTTCAGGGGATCTTATGGAG...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTAAGAGGGCTGGCTCCTaGAGCCCTGAGATGCTCCAT +
Preference number: 2 (lower is better)
Translates to: REGCISLLTAVIAVCWNCKRAGS*SPEMLH
Trigger: ATGGAGCATCTCAGGGCTTCAGGAGCCAGCCCTCTT...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTGCCACAGAACAAGATaGAGTTGGTTTTGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: TRFILAFKPLHQLGHRECCHRTR*SWFCGA
Trigger: GGCACCACAAAACCAACTGCATCTTGTTCTGTGGCA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR GCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGGCCCTTGGCTTTGTGTaGAGTGTCACCTGGGCACTA +
Preference number: 2 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGALGFV*SVTWAL
Trigger: TAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGC...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTACTTGTGGGCAACCTTaGACAGAGGCACATTCTTCT +
Preference number: 2 (lower is better)
Translates to: TRFILAFKPLHQLGHRECTCGQP*TEAHSS
Trigger: AGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGTGTGCAGTGTCACCTaGGCACTAGTCCCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERVCSVT*ALVPCS
Trigger: TGAACAGGGGACTAGTGCCCAGGTGACACTGCACAC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 90 bp TTGTATTTATTCAGGTGTTTTGTGGGACCCAAAGAAGCTCGCAGGTaGCAATTAGTTATCACACATCCTCCTGTGGCACTTCCACAGTGC +
Preference number: 2 (lower is better)
Translates to: LYLFRCFVGPKEARR*QLVITHPPVALPQC
Trigger: GCACTGTGGAAGTGCCACAGGAGGATGTGTGATAACTAATTGCAACCTGCGAGCTTCTTTGGGTCCCACAAAACACCTGAATAAATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR TCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGATATTTCAGCTGCACATaGGACACAGGGTGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERYFSCT*DTGWLQ
Trigger: CTGCAGCCACCCTGTGTCTCATGTGCAGCTGAAATA...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp GTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGATGGGGTGCAGCAGATaGAGGAATGGAAAATGTCTT +
Preference number: 2 (lower is better)
Translates to: VSVHTVQVGKEDRSDWMQMGCSR*RNGKCL
Trigger: AAGACATTTTCCATTCCTGCATCTGCTGCACCCCAT...CTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATCATTACAAACTGTGTaGGACAGGGGGCATGCAGGG +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQSLQTV*DRGHAG
Trigger: CCCTGCATGCCCCCTGTCTCACACAGTTTGTAATGA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATCATTACAAACTGTGTaGGACAGGGGGCATGCAGGG +
Preference number: 2 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKSLQTV*DRGHAG
Trigger: CCCTGCATGCCCCCTGTCTCACACAGTTTGTAATGA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGACTAAGGGGTGTGCTTaGGCTGTGTCTGAGCACATA +
Preference number: 2 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGTKGCA*AVSEHI
Trigger: TATGTGCTCAGACACAGCTCAAGCACACCCCTTAGT...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp ATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCCATGAGAAGGGAGCATaGGACGAGAAATGGGGAATG +
Preference number: 2 (lower is better)
Translates to: IHTTVSGRDCLTKDKEHGHEKGA*DEKWGM
Trigger: CATTCCCCATTTCTCGTCTCATGCTCCCTTCTCATG...GCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR-3UTR GCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCCTGAAGCCCTGAGATaGTCCATAAGATCCCCTGAA +
Preference number: 2 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGPEALR*SIRSPE
Trigger: TTCAGGGGATCTTATGGAGCATCTCAGGGCTTCAGG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTAAGAAAAGAAAAGGGTaGTCTGCACAGAATCTTGGC +
Preference number: 2 (lower is better)
Translates to: TRFILAFKPLHQLGHRECKKRKG*SAQNLG
Trigger: GCCAAGATTCTGTGCAGACCACCCTTTTCTTTTCTT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CCA 90 bp ACTGGCCCTAGGTACAGAGAGATGAAGACAGATTATGAGATGTATCAGTACACAGCTTGGAGAACTGACTaGATGATGGTGCTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: TGPRYREMKTDYEMYQYTAWRTD*MMVLFR
Trigger: TCTGAACAGCACCATCATCCAGTCAGTTCTCCAAGC...TGTGTACTGATACATCTCATAATCTGTCTTCATCTCTCTGTACCTAGGGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR TCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCACACATTCTTCTCAGTTaGCATTCCAGAAAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAHILLS*HSRKVC
Trigger: GCAGACTTTTCTGGAATGTCAACTGAGAAGAATGTG...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR GCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGAGCTCAGTCCTAAAGTaGATTGCTGAGTCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGSSVLK*IAESLN
Trigger: GTTCAGGGACTCAGCAATGCACTTTAGGACTGAGCT...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp TGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGACGAGAAATGGGGAATaGAAGAAGACTTCATCAGCA +
Preference number: 2 (lower is better)
Translates to: CEWERLFDKRQRAWLRTLTRNGE*KKTSSA
Trigger: TGCTGATGAAGTCTTCTTGCATTCCCCATTTCTCGT...CAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR-3UTR GCA 90 bp GGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTATTAATTCAACTAGAAGGCTGTATGGGGTaGAGCAGATGCAGGAATGGA +
Preference number: 2 (lower is better)
Translates to: GSSWAIKSHCHLSLLIQLEGCMG*SRCRNG
Trigger: TCCATTCCTGCATCTGCTGCACCCCATACAGCCTTC...TAGTTGAATTAATAAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGGCACACGCTTTATTTTaGCATTCAAGCCACTGCACC +
Preference number: 2 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWAHALF*HSSHCT
Trigger: GGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGC...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWYRVCP*LCVQCH
Trigger: GTGACACTGCACACAAAGCCAAGGGCAAACCCTATA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAACTCCATAAGATCCCCTaGAACAATGGGCACAGACTT +
Preference number: 2 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKLHKIP*NNGHRL
Trigger: AAGTCTGTGCCCATTGTTTCAGGGGATCTTATGGAG...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp TGGAAAGTTGTGAACAGATGTATTGTTCAATTAGATTTCTGTGATTGGTTCTGGCAAGGAAGACAGAAGTaGCTGGATGCAGGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: WKVVNRCIVQLDFCDWFWQGRQK*LDAGGK
Trigger: CTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTG...CCAGAACCAATCACAGAAATCTAATTGAACAATACATCTGTTCACAACTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR GCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACAGGCCCAAATTTCATaGATCTGCGGCCTCAGTTAT +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQQAQIS*ICGLSY
Trigger: ATAACTGAGGCCGCAGATGCATGAAATTTGGGCCTG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 90 bp ACACATCCTCCTGTGGCACTTCCACAGTGCTTGTCTTTTATGACATaGCCTCTTTTAGAGAGTTTCAGCCAATTATTTGGTAGAATATCC +
Preference number: 2 (lower is better)
Translates to: THPPVALPQCLSFMT*PLLESFSQLFGRIS
Trigger: GGATATTCTACCAAATAATTGGCTGAAACTCTCTAAAAGAGGCAATGTCATAAAAGACAAGCACTGTGGAAGTGCCACAGGAGGATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR CAA 90 bp TGTAGGAGAATTCCAGTTGTTCTACATCGTTGCCCACTCTTGATGTaGTCAGTGGTTTTAATTTTACCTACTTTGGTAGAGTTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: CRRIPVVLHRCPLLM*SVVLILPTLVELWW
Trigger: CCACCACAACTCTACCAAAGTAGGTAAAATTAAAACCACTGACAACATCAAGAGTGGGCAACGATGTAGAACAACTGGAATTCTCCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR TCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGAGGCTTATGGAAAGATaGGAAGGAGCTGTCTTCATT +
Preference number: 2 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGRLMER*EGAVFI
Trigger: AATGAAGACAGCTCCTTCTCATCTTTCCATAAGCCT...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACCTAAAGTGCATTGCTaGGTCCCTGAACTTGTATCT +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQPKVHC*VPELVS
Trigger: AGATACAAGTTCAGGGACTCAGCAATGCACTTTAGG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGGTGTCTGAGCACATATaGTTAGTTAGAGGACTCAGT +
Preference number: 2 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWVSEHI*LVRGLS
Trigger: ACTGAGTCCTCTAACTAATCATATGTGCTCAGACAC...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATTACTCTATAGGGTTTaGCCTTGGCTTTGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKLLYRV*PWLCVQ
Trigger: CTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATTACTCTATAGGGTTTaGCCTTGGCTTTGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQLLYRV*PWLCVQ
Trigger: CTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATCACACACTATCCAGTaGACACGCTTTATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQSHTIQ*TRFILA
Trigger: TGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCAAATTTCATGCATCTaGGGCCTCAGTTATTCTCAA +
Preference number: 2 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGQISCI*GLSYSQ
Trigger: TTGAGAATAACTGAGGCCGCAGATGCATGAAATTTG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTCAGGCCCAAATTTCATaGATCTGCGGCCTCAGTTAT +
Preference number: 2 (lower is better)
Translates to: LHTHNREGCISLLTAVIAQAQIS*ICGLSY
Trigger: ATAACTGAGGCCGCAGATGCATGAAATTTGGGCCTG...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp CACCTCCCAAAGGTCCCACCTCTTAATACTGATACATTGGATGTTGGGTTTCAAGGTGGTATTTCACTGTaGATTTCATATGAATGTCTT +
Preference number: 2 (lower is better)
Translates to: HLPKVPPLNTDTLDVGFQGGISL*ISYECL
Trigger: AAGACATTCATATGAAATGCACAGTGAAATACCACC...TTGAAACCCAACATCCAATGTATCAGTATTAAGAGGTGGGACCTTTGGGAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR CCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATGTATCTCAGGCTTATaGAAAGATGAGAAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQCISGL*KDEKEL
Trigger: CAGCTCCTTCTCATCTTTCCATAAGCCTGAGATACA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp ATGAGGTTGATACGGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTTTATCCTATAGCTACTaGTTAGCTACTGGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: MRLIREFMGHQITLSLIFLSYSY*LATGKL
Trigger: CAACTTTCCAGTAGCTAACCAGTAGCTATAGGATAA...AAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCCGTATCAACCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR CAA 90 bp AATTTTGGTGGAAGACGGCATTCAGGTTATAGGACATGCTTAACTTaGCTTAGTGCAACGTTTGCTTCAACACTATTAGGCTTTTGTAGA +
Preference number: 2 (lower is better)
Translates to: NFGGRRHSGYRTCLT*LSATFASTLLGFCR
Trigger: TCTACAAAAGCCTAATAGTGTTGAAGCAAACGTTGCACTAAGCAAAGTTAAGCATGTCCTATAACCTGAATGCCGTCTTCCACCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAACAAATTTCATGCATCTaGGGCCTCAGTTATTCTCAA +
Preference number: 2 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKQISCI*GLSYSQ
Trigger: TTGAGAATAACTGAGGCCGCAGATGCATGAAATTTG...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp TTTATGAGGACATCAATCCCATTTATGAGGGCTTTTTCCTCAGGACCTAATCACTCAGGTTATAGGACATaGTTAACTTTGCTTAGTGCA +
Preference number: 2 (lower is better)
Translates to: FMRTSIPFMRAFSSGPNHSGYRT*LTLLSA
Trigger: TGCACTAAGCAAAGTTAAGCATGTCCTATAACCTGA...GTGATTAGGTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATGTCCTCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR CCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTCTCAGTTATTCTCAATaGCTCTGGAACTTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: REGCISLLTAVIAVCWNCLSYSQ*LWNFQQ
Trigger: TTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAG...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR TCA 90 bp TTGATACGGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTATTAATAAGTGGGAGCAAGAATaGAGAAGTAACAGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: LIREFMGHQITLSLIFINKWEQE*RSNSLF
Trigger: AAAAAGGCTGTTACTTCTTCATTCTTGCTCCCACTT...ATTAATAAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCCGTATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR GCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTTCACACACTATCCAGTaGACACGCTTTATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: LHTHNREGCISLLTAVIASHTIQ*TRFILA
Trigger: TGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGA...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR GCA 90 bp GGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTATTAATTCAACTAAAGTTAAGTGTGAAATaGCTGCAGACATCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: GSSWAIKSHCHLSLLIQLKLSVK*LQTSEG
Trigger: TCCTTCAGATGTCTGCAGGCATTTCACACTTAACTT...TAGTTGAATTAATAAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR CCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTT +
Preference number: 2 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKYSQWL*NFQQRL
Trigger: AAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAATCAAATTGATGACCTaGAAAGATCTTAAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQIKLMT*KDLKGG
Trigger: ACCTCCCTTAAGATCTTTCCAGGTCATCAATTTGAT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTTTGCGTAAGTTCCTTTaGTATTTTGTGTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: REGCISLLTAVIAVCWNCLRKFL*YFVCFR
Trigger: TCTGAAACACACAAAATACCAAAGGAACTTACGCAA...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 72 bp TGGGCACTAGTCCCCTGTTCAGCCTGGCAGTGGTGGTaGGCAGAGCCGGGCGGATGGAAGAGGGCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: WALVPCSAWQWW*AEPGGWKRAGS
Trigger: GGAGCCAGCCCTCTTCCATCCGCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACAGGGGACTAGTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 72 bp AGGGTGGCTGCAGCTTTACTCTATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCACCTGGGCACTAGTCCC +
Preference number: 3 (lower is better)
Translates to: RVAAALLYRVCP*LCVQCHLGTSP
Trigger: GGGACTAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAAAGCTGCAGCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp GAAGGACAATTTCCAGTAGGCAGTTTTCTATACAGCTCCAGACCTGAAGATGAAGCATCTGGGCCGCCCTaGATCTTCACCCAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: EGQFPVGSFLYSSRPEDEASGPP*IFTQLV
Trigger: CACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATGC...TTCATCTTCAGGTCTGGAGCTGTATAGAAAACTGCCTACTGGAAATTGTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR TCA 72 bp TGGATGCAGGAGGCAAGAGTAAGGAGAAGTCTAAGATaGCTGCTGGGCTTCTGGCTTGGAGAACTGACTGGA +
Preference number: 3 (lower is better)
Translates to: WMQEARVRRSLR*LLGFWLGELTG
Trigger: TCCAGTCAGTTCTCCAAGCCAGAAGCCCAGCAGTCATCTTAGACTTCTCCTTACTCTTGCCTCCTGCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR CAA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTACCTCCACGAAGCACTaGTGGGCAACCTTGGACAGA +
Preference number: 3 (lower is better)
Translates to: TRFILAFKPLHQLGHRECTSTKH*WATLDR
Trigger: TCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CAA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTCACTTGTGGGCAACCTaGGACAGAGGCACATTCTTC +
Preference number: 3 (lower is better)
Translates to: TRFILAFKPLHQLGHRECHLWAT*DRGTFF
Trigger: GAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGTG...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CAA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTCCAGAAAAGTCTGCCTaGGCTTCGTCAAAAGCATCG +
Preference number: 3 (lower is better)
Translates to: TRFILAFKPLHQLGHRECPEKSA*ASSKAS
Trigger: CGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTGG...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295211.5
3UTR-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGGGTTTGCCCTTGGCTTaGTGTGCAGTGTCACCTGGG +
Preference number: 3 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGGLPLA*CAVSPG
Trigger: CCCAGGTGACACTGCACACAAAGCCAAGGGCAAACC...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp CTTCTGAGTCTAATGAGGGGACTATTCAGGGTTAAATCAGAGGGCAACTCAGAGACTTCATCAGCATCCTaGTTTGTCCTCTGCCTGTCC +
Preference number: 3 (lower is better)
Translates to: LLSLMRGLFRVKSEGNSETSSAS*FVLCLS
Trigger: GGACAGGCAGAGGACAAACAAGGATGCTGATGAAGT...CTCTGAGTTGCCCTCTGATTTAACCCTGAATAGTCCCCTCATTAGACTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR TCA 72 bp TCATCTGAAGATGAAGGGAGGCATGAGAAGGGAGCATaGGACGAGAAATGGGGAATGCAAGAAGACTTCATC +
Preference number: 3 (lower is better)
Translates to: SSEDEGRHEKGA*DEKWGMQEDFI
Trigger: GATGAAGTCTTCTTGCATTCCCCATTTCTCGTCTCATGCTCCCTTCTCATGCCTCCCTTCATCTTCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR TCA 72 bp AGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTaGCTGGATGCAGGAGGCAAGAGTAAGGAGAAGTCT +
Preference number: 3 (lower is better)
Translates to: STHSTSRQGRQK*LDAGGKSKEKS
Trigger: AGACTTCTCCTTACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR CCA 72 bp CACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTaGATGCAGGAGGCAAGAGTAAGGAGAAGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: HTVQVGKEDRSD*MQEARVRRSLR
Trigger: TCTTAGACTTCTCCTTACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR CAA 90 bp ATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCCATCAGCATCCTTGTTaGTCCTCTGCCTGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: IHTTVSGRDCLTKDKEHGHQHPC*SSACPG
Trigger: TCCAGGACAGGCAGAGGACAAACAAGGATGCTGATG...GCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR CCA 72 bp TCATGCATCTGCGGCCTCAGTTATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTTTCACACACTATCCAG +
Preference number: 3 (lower is better)
Translates to: SCICGLSYSQWL*NFQQRLSHTIQ
Trigger: CTGGATAGTGTGTGAAAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAGGCCGCAGATGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR GCA 72 bp TGGAACTTTCAGCAAAGACTTTCACACACTATCCAGTaGACACGCTTTATTTTGGCATTCAAGCCACTGCAC +
Preference number: 3 (lower is better)
Translates to: WNFQQRLSHTIQ*TRFILAFKPLH
Trigger: GTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGAAAGTCTTTGCTGAAAGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGTGCACACGCTTTATTTaGGCATTCAAGCCACTGCAC +
Preference number: 3 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGCTRFI*AFKPLH
Trigger: GTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCA...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGGGACTCAGTGGTGTGTaGCGTAAGTTCCTTTGGTAT +
Preference number: 3 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGGLSGV*RKFLWY
Trigger: ATACCAAAGGAACTTACGCAACACACCACTGAGTCC...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGGACTCAGTGGTGTGTaGCGTAAGTTCCTTTGGTAT +
Preference number: 3 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERGLSGV*RKFLWY
Trigger: ATACCAAAGGAACTTACGCAACACACCACTGAGTCC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR TCA 72 bp TTGCCCAAACCTGCTTTGGAAAACATGATCCCTAAATaGATGTGGCCTAACAGATATATCCTGGCTTGGTCA +
Preference number: 3 (lower is better)
Translates to: LPKPALENMIPK*MWPNRYILAWS
Trigger: TGACCAAGCCAGGATATATCTGTTAGGCCACATTCATTTAGGGATCATGTTTTCCAAAGCAGGTTTGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 72 bp CAAATTTCATGCATCTGCGGCCTCAGTTATTCTCAATaGCTCTGGAACTTTCAGCAAAGACTTTCACACACT +
Preference number: 3 (lower is better)
Translates to: QISCICGLSYSQ*LWNFQQRLSHT
Trigger: AGTGTGTGAAAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAGGCCGCAGATGCATGAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CCA 72 bp GTTAGAGGACTCAGTGGTGTGTTGCGTAAGTTCCTTTaGTATTTTGTGTGTTTCAGAGGGAAAAGGAATGGA +
Preference number: 3 (lower is better)
Translates to: VRGLSGVLRKFL*YFVCFRGKRNG
Trigger: TCCATTCCTTTTCCCTCTGAAACACACAAAATACCAAAGGAACTTACGCAACACACCACTGAGTCCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATGCACACGCTTTATTTaGGCATTCAAGCCACTGCAC +
Preference number: 3 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQCTRFI*AFKPLH
Trigger: GTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAGCTGAGTCCCTGAACTaGTATCTCAGGCTTATGGAA +
Preference number: 3 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKAESLN*YLRLME
Trigger: TTCCATAAGCCTGAGATACAAGTTCAGGGACTCAGC...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR GCA 72 bp TTAGTTATCACACATCCTCCTGTGGCACTTCCACAGTaGTTGTCTTTTATGACATTGCCTCTTTTAGAGAGT +
Preference number: 3 (lower is better)
Translates to: LVITHPPVALPQ*LSFMTLPLLES
Trigger: ACTCTCTAAAAGAGGCAATGTCATAAAAGACAAGCACTGTGGAAGTGCCACAGGAGGATGTGTGATAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR GCA 72 bp ATCACAGGAGGTAAATCAGATGAAGGCTGTATGGGGTaGAGCAGATGCAGGAATGGAAAATGTCTTTATTTT +
Preference number: 3 (lower is better)
Translates to: ITGGKSDEGCMG*SRCRNGKCLYF
Trigger: AAAATAAAGACATTTTCCATTCCTGCATCTGCTGCACCCCATACAGCCTTCATCTGATTTACCTCCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR CAA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGCTGTAGTTTCCAAATaGCTGCCACAACGCAATTTT +
Preference number: 3 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERAVVSK*LPQRNF
Trigger: AAAATTGCGTTGTGGCAGCAATTTGGAAACTACAGC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR-3UTR CAA 90 bp TTTATGAGGACATCAATCCCATTTATGAGGGCTTTTTCCTCAGGACCTAATCACATTTATTCAGGTGTTTaGTGGGACCCAAAGAAGCTC +
Preference number: 3 (lower is better)
Translates to: FMRTSIPFMRAFSSGPNHIYSGV*WDPKKL
Trigger: GAGCTTCTTTGGGTCCCACAAAACACCTGAATAAAT...GTGATTAGGTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATGTCCTCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR CAA 90 bp ATTGGATGTTGGGTTTCAACATATAAATTTTGGTGGAAGACGGCATTCAGGTTACCTACTTTGGTAGAGTaGTGGTGGTATTTCACTGTG +
Preference number: 3 (lower is better)
Translates to: IGCWVSTYKFWWKTAFRLPTLVE*WWYFTV
Trigger: CACAGTGAAATACCACCACAACTCTACCAAAGTAGG...TAACCTGAATGCCGTCTTCCACCAAAATTTATATGTTGAAACCCAACATCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR GCA 72 bp AATTTTGGTGGAAGACGGCATTCAGGTTATAGGACATaGTTAACTTTGCTTAGTGCAACGTTTGCTTCAACA +
Preference number: 3 (lower is better)
Translates to: NFGGRRHSGYRT*LTLLSATFAST
Trigger: TGTTGAAGCAAACGTTGCACTAAGCAAAGTTAAGCATGTCCTATAACCTGAATGCCGTCTTCCACCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGAGTTCCTTTGGTATTTaGTGTGTTTCAGAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGSSFGI*CVSEGK
Trigger: TTTTCCCTCTGAAACACACAAAATACCAAAGGAACT...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR TCA 72 bp AGTTGTGAACAGATGTATTGTTCAATTAGATTTCTGTaGTTGGTTCTGGCAATAATCTGGAGGATGGAGTCG +
Preference number: 3 (lower is better)
Translates to: SCEQMYCSIRFL*LVLAIIWRMES
Trigger: CGACTCCATCCTCCAGATTATTGCCAGAACCAATCACAGAAATCTAATTGAACAATACATCTGTTCACAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR-3UTR CAA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTAGTTCCTTTGGTATTTaGTGTGTTTCAGAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: REGCISLLTAVIAVCWNCSSFGI*CVSEGK
Trigger: TTTTCCCTCTGAAACACACAAAATACCAAAGGAACT...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTCAGCCTGGCAGTGGTaGTGGGCAGAGCCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIASAWQW*WAEPGG
Trigger: TCCGCCCGGCTCTGCCCACCACCACTGCCAGGCTGA...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATGTTCAGCCTGGCAGTaGTGGTGGGCAGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPCSAWQ*WWAEPG
Trigger: GCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATGCACCGGGAATTCCTaGCCACAGCAGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPCTGNS*PQQWLR
Trigger: CCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAGACCACAGCAGTGGCTaGGGCAGCCTCTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPDHSSG*GSLCAF
Trigger: GAAGGCACAGAGGCTGCCGCAGCCACTGCTGTGGTC...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATCAGCCTGGCAGTGGTaGTGGGCAGAGCCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEASAWQW*WAEPGG
Trigger: TCCGCCCGGCTCTGCCCACCACCACTGCCAGGCTGA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAGAGCAGATCAGTGGTTaGGATGGGACGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPEQISG*DGTGRG
Trigger: CCCTCTCCCCGTCCCATCCCAACCACTGATCTGCTC...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACTGCACCGGGAATTCCTaGCCACAGCAGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RVVCTESWLHSAAPGIPDCTGNS*PQQWLR
Trigger: CCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCA...GTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCACGCCGCCGCCGCTGCTaGTTTGACTATTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPRRRRC*FDYSSF
Trigger: AAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCG...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACGCCGCCGCCGCCGCTaGTGCTTTGACTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEARRRRR*CFDYSS
Trigger: GGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAGACCACAGCAGTGGCTaGGGCAGCCTCTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEADHSSG*GSLCAF
Trigger: GAAGGCACAGAGGCTGCCGCAGCCACTGCTGTGGTC...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCAAACAAAGTGCCTCCTaGTGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAKQSAS*CCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGGAGGCACTTTGTTT...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542677.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAGTGTGCAGTGTCACCTaGGCACTAGTCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPVCSVT*ALVPCS
Trigger: TGAACAGGGGACTAGTGCCCAGGTGACACTGCACAC...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATCATTACAAACTGTGTaGGACAGGGGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPSLQTV*DRGHAG
Trigger: CCCTGCATGCCCCCTGTCTCACACAGTTTGTAATGA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCGACCACAGCAGTGGCTaGGGCAGCCTCTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RKGWSAQNLGSILLHREFDHSSG*GSLCAF
Trigger: GAAGGCACAGAGGCTGCCGCAGCCACTGCTGTGGTC...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATCAGAGAAGGTCTCCTaGTGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEASEKVS*CCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGGAGACCTTCTCTGA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397985.7
CDS-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAGGCAGCTCCAGGACCTaGGTGTGTACCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAGSSRT*VCTSSA
Trigger: TGCGGATGAGGTACACACCCAGGTCCTGGAGCTGCC...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTCCACGAAGCACTTGTaGGCAACCTTGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIASTKHL*ATLDRG
Trigger: GCCTCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGA...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAGAGCAGATCAGTGGTTaGGATGGGACGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAEQISG*DGTGRG
Trigger: CCCTCTCCCCGTCCCATCCCAACCACTGATCTGCTC...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCGGCAGCTCCAGGACCTaGGTGTGTACCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: RKGWSAQNLGSILLHREFGSSRT*VCTSSA
Trigger: TGCGGATGAGGTACACACCCAGGTCCTGGAGCTGCC...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR TCA 90 bp GTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VVCTESWLHSAAPGIPDHHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...GTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR TCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCACTCCATAAGATCCCCTaGAACAATGGGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPLHKIP*NNGHRL
Trigger: AAGTCTGTGCCCATTGTTTCAGGGGATCTTATGGAG...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGGAGGCACATCTGGGCCGCCCTTaGTCTTCACCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHTVQVGKEDRSDWMQEAHLGRP*SSPSWC
Trigger: ACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATG...TGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCACAACTCCTCCAGCTCTaGCTGATAGAACTTCTGACA +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPQLLQL*LIELLT
Trigger: TGTCAGAAGTTCTATCAGGCAGAGCTGGAGGAGTTG...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATGCCACAGAACAAGATaGAGTTGGTTTTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPCHRTR*SWFCGA
Trigger: GGCACCACAAAACCAACTGCATCTTGTTCTGTGGCA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAAGCTCAGTCCTAAAGTaGATTGCTGAGTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPSSVLK*IAESLN
Trigger: GTTCAGGGACTCAGCAATGCACTTTAGGACTGAGCT...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAACTTGTGGGCAACCTTaGACAGAGGCACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPTCGQP*TEAHSS
Trigger: AGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGT...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACGTCTGCACAGAATCTTaGCTCCATTCTGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: RVVCTESWLHSAAPGIPDVCTES*LHSAAP
Trigger: CGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGAC...GTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAGCACACGCTTTATTTTaGCATTCAAGCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPAHALF*HSSHCT
Trigger: GGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGC...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATTCCTCCTTTGTAGATaGTTCACGTCCGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPFLLCR*FTSALI
Trigger: AATCAAGGCGGACGTGAAGCATCTACAAAGGAGGAA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AAGAGTAAGGAGAAGTCTAAGATGACTGCTGGGCTTCTGGCTTGGAGAACTGACTCAGAGAAGGTCTCCTaGTGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KSKEKSKMTAGLLAWRTDSEKVS*CCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGGAGACCTTCTCTGA...GTCAGTTCTCCAAGCCAGAAGCCCAGCAGTCATCTTAGACTTCTCCTTACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGGCCTGGCAGTGGTGGTaGGCAGAGCCGGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWAWQWW*AEPGGW
Trigger: CCATCCGCCCGGCTCTGCCCACCACCACTGCCAGGC...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGCCTGGCAGTGGTGGTaGGCAGAGCCGGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIAWQWW*AEPGGW
Trigger: CCATCCGCCCGGCTCTGCCCACCACCACTGCCAGGC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATGTTCAGCCTGGCAGTaGTGGTGGGCAGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKACSAWQ*WWAEPG
Trigger: GCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCACACGTCCGCCTTGATTaGGGGCAAGGCTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAHVRLD*GQGFRQ
Trigger: CTGCCGGAAGCCTTGCCCTCAATCAAGGCGGACGTG...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR TCA 90 bp CATGCATCTGGGCCGCCCTTGATCTTCACCCAGCTGGTGTTTGATCATAAATGGCAAGGAAGACAGAAGTaGCTGGATGCAGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HASGPPLIFTQLVFDHKWQGRQK*LDAGGK
Trigger: CTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTG...CCATTTATGATCAAACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPTQSFI*FLHSSV
Trigger: CACTGAAGAGTGCAGGAAGCATATAAATGACTGGGT...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACTGCCACAGAACAAGATaGAGTTGGTTTTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: VVCTESWLHSAAPGIPDHCHRTR*SWFCGA
Trigger: GGCACCACAAAACCAACTGCATCTTGTTCTGTGGCA...GTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACCTGAAGCCCTGAGATaGTCCATAAGATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAPEALR*SIRSPE
Trigger: TTCAGGGGATCTTATGGAGCATCTCAGGGCTTCAGG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCCAGAAAAGTCTGCCTTaGCTTCGTCAAAAGCATCGA +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAQKSLP*LRQKHR
Trigger: TCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTG...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCCACATTCTTCTCAGTTaGCATTCCAGAAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAHILLS*HSRKVC
Trigger: GCAGACTTTTCTGGAATGTCAACTGAGAAGAATGTG...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTAAGAGGGCTGGCTCCTaGAGCCCTGAGATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECKRAGS*SPEMLH
Trigger: ATGGAGCATCTCAGGGCTTCAGGAGCCAGCCCTCTT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCGTGTCTGAGCACATATaGTTAGTTAGAGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAVSEHI*LVRGLS
Trigger: ACTGAGTCCTCTAACTAATCATATGTGCTCAGACAC...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACAGCAGTCAACTCCTCCAGCTCTaGCTGATAGAACTTCTGACA +
Preference number: 4 (lower is better)
Translates to: CTESWLHSAAPGIPDHSSQLLQL*LIELLT
Trigger: TGTCAGAAGTTCTATCAGGCAGAGCTGGAGGAGTTG...ACTGCTGTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACAACTCCTCCAGCTCTaGCTGATAGAACTTCTGACA +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAQLLQL*LIELLT
Trigger: TGTCAGAAGTTCTATCAGGCAGAGCTGGAGGAGTTG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTCAGAGAAGGTCTCCTaGTGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TVSGRDCLTKDKEHGSELSEKVS*CCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGGAGACCTTCTCTGA...GAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CCA 90 bp ACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCGGCAGCTCCAGGACCTaGGTGTGTACCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: TVSGRDCLTKDKEHGSELGSSRT*VCTSSA
Trigger: TGCGGATGAGGTACACACCCAGGTCCTGGAGCTGCC...GAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAGGCAGCTCCAGGACCTaGGTGTGTACCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAGSSRT*VCTSSA
Trigger: TGCGGATGAGGTACACACCCAGGTCCTGGAGCTGCC...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCAAGAAAAGAAAAGGGTaGTCTGCACAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAKKRKG*SAQNLG
Trigger: GCCAAGATTCTGTGCAGACCACCCTTTTCTTTTCTT...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATCAGCCTGGCAGTGGTaGTGGGCAGAGCCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKSAWQW*WAEPGG
Trigger: TCCGCCCGGCTCTGCCCACCACCACTGCCAGGCTGA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGTGTTCAGCCTGGCAGTaGTGGTGGGCAGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGCSAWQ*WWAEPG
Trigger: GCCCGGCTCTGCCCACCACCACTGCCAGGCTGAACA...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTTGCACCGGGAATTCCTaGCCACAGCAGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLICTGNS*PQQWLR
Trigger: CCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCA...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGACACGTCCGCCTTGATTaGGGGCAAGGCTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERHVRLD*GQGFRQ
Trigger: CTGCCGGAAGCCTTGCCCTCAATCAAGGCGGACGTG...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR TCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCCTGGGAAGGAAAACTTaGACCTTACTTTTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIALGRKT*TLLFVN
Trigger: GTTGACAAAAAGTAAGGTTCAAGTTTTCCTTCCCAG...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACCTAAAGTGCATTGCTaGGTCCCTGAACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAPKVHC*VPELVS
Trigger: AGATACAAGTTCAGGGACTCAGCAATGCACTTTAGG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCAGGGAGAAGGAAGAGTaGGAAATTACAAAGATGCAA +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAREKEE*EITKMQ
Trigger: TTGCATCTTTGTAATTTCTCACTCTTCCTTCTCCCT...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACGGTATGTACAGCAATTaGTCCTCTTTACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RVVCTESWLHSAAPGIPDGMYSN*SSLRRR
Trigger: TCTTCTCCGTAAAGAGGAGCAATTGCTGTACATACC...GTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR GCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACGCCGCCGCCGCCGCTaGTGCTTTGACTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQRRRRR*CFDYSS
Trigger: GGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTGCCCTTGGCTTTGTGTaGAGTGTCACCTGGGCACTA +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECALGFV*SVTWAL
Trigger: TAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGC...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATTACTCTATAGGGTTTaGCCTTGGCTTTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEALLYRV*PWLCVQ
Trigger: CTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AAGAGTAAGGAGAAGTCTAAGATGACTGCTGGGCTTCTGGCTTGGAGAACTGACGAAGGCTGTATGGGGTaGAGCAGATGCAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: KSKEKSKMTAGLLAWRTDEGCMG*SRCRNG
Trigger: TCCATTCCTGCATCTGCTGCACCCCATACAGCCTTC...GTCAGTTCTCCAAGCCAGAAGCCCAGCAGTCATCTTAGACTTCTCCTTACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CCA 90 bp GTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACAAGAAAAGAAAAGGGTaGTCTGCACAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: VVCTESWLHSAAPGIPDHKKRKG*SAQNLG
Trigger: GCCAAGATTCTGTGCAGACCACCCTTTTCTTTTCTT...GTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPYSQWL*NFQQRL
Trigger: AAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAGATCAGTGGTTGGGATaGGACGGGGAGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKADQWLG*DGEREK
Trigger: CTTCTCCCTCTCCCCGTCCCATCCCAACCACTGATC...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 72 bp CATGATGTAGTTGGCACTCATGCATCTGGGCCGCCCTaGATCTTCACCCAGCTGGTGTTTGATCATAAATGG +
Preference number: 4 (lower is better)
Translates to: HDVVGTHASGPP*IFTQLVFDHKW
Trigger: CCATTTATGATCAAACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATGCATGAGTGCCAACTACATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR TCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAAGCATCCAGTACCTCTaGAATCTTACCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEASIQYL*NLTFSL
Trigger: AAGACTGAAGGTAAGATTTCAGAGGTACTGGATGCT...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACAGCAGTCACATTCTTCTCAGTTaGCATTCCAGAAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: CTESWLHSAAPGIPDHSSHILLS*HSRKVC
Trigger: GCAGACTTTTCTGGAATGTCAACTGAGAAGAATGTG...ACTGCTGTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR TCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCACACATTCTTCTCAGTTaGCATTCCAGAAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAHILLS*HSRKVC
Trigger: GCAGACTTTTCTGGAATGTCAACTGAGAAGAATGTG...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATGCACCGGGAATTCCTaGCCACAGCAGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQCTGNS*PQQWLR
Trigger: CCGCAGCCACTGCTGTGGTCAGGAATTCCCGGTGCA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTCCGCCGCTGCTGCTTTaGCTATTCCTCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECPPLLL*LFLLCR
Trigger: TCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGG...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTATTTCAGCTGCACATaGGACACAGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECYFSCT*DTGWLQ
Trigger: CTGCAGCCACCCTGTGTCTCATGTGCAGCTGAAATA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCAACATGATCCCTAAATaGATGTGGCCTAACAGATAT +
Preference number: 4 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIANMIPK*MWPNRY
Trigger: ATATCTGTTAGGCCACATTCATTTAGGGATCATGTT...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAGACCACAGCAGTGGCTaGGGCAGCCTCTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKDHSSG*GSLCAF
Trigger: GAAGGCACAGAGGCTGCCGCAGCCACTGCTGTGGTC...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATGCAGTGCTTCCCTTTaGCCCCATGAAGACCATGGC +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKACSASL*PHEDHG
Trigger: GCCATGGTCTTCATGGGGGCAAAGGGAAGCACTGCA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000397985.7
CDS-3UTR GCA 90 bp AGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGCTTCTGCAGTGCTTCCCTTTaGCCCCATGAAGACCATGGC +
Preference number: 4 (lower is better)
Translates to: SGRDCLTKDKEHGSELCFCSASL*PHEDHG
Trigger: GCCATGGTCTTCATGGGGGCAAAGGGAAGCACTGCA...GAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATCACACACTATCCAGTaGACACGCTTTATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEASHTIQ*TRFILA
Trigger: TGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGGCAGCTCCAGGACCTaGGTGTGTACCTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERGSSRT*VCTSSA
Trigger: TGCGGATGAGGTACACACCCAGGTCCTGGAGCTGCC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCAGAAAAGTCTGCCTTaGCTTCGTCAAAAGCATCGA +
Preference number: 4 (lower is better)
Translates to: RKGWSAQNLGSILLHREFQKSLP*LRQKHR
Trigger: TCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTG...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR CCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATCCACGAAGCACTTGTaGGCAACCTTGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKASTKHL*ATLDRG
Trigger: GCCTCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTGTCTGCACAGAATCTTaGCTCCATTCTGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECVCTES*LHSAAP
Trigger: CGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGAC...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATGTATCTCAGGCTTATaGAAAGATGAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEACISGL*KDEKEL
Trigger: CAGCTCCTTCTCATCTTTCCATAAGCCTGAGATACA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCACGATGGTTTGTTTCATaGAAAATGTGTCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPRWFVS*KMCQNL
Trigger: TAAGTTCTGACACATTTTCCATGAAACAAACCATCG...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGAGCAGATCAGTGGTTaGGATGGGACGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIEQISG*DGTGRG
Trigger: CCCTCTCCCCGTCCCATCCCAACCACTGATCTGCTC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGGAGGCAGCTTGGAGAACTGACTaGATGATGGTGCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VHTVQVGKEDRSDWMQEAAWRTD*MMVLFR
Trigger: TCTGAACAGCACCATCATCCAGTCAGTTCTCCAAGC...TGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR TCA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCAGCATCCAGTACCTCTaGAATCTTACCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RKGWSAQNLGSILLHREFSIQYL*NLTFSL
Trigger: AAGACTGAAGGTAAGATTTCAGAGGTACTGGATGCT...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAGCTTCACGTCCGCCTTaGTTGAGGGCAAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQASRPP*LRARLP
Trigger: CGGAAGCCTTGCCCTCAATCAAGGCGGACGTGAAGC...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR TCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATATTTCAGCTGCACATaGGACACAGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAYFSCT*DTGWLQ
Trigger: CTGCAGCCACCCTGTGTCTCATGTGCAGCTGAAATA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTACTAAGGGGTGTGCTTaGGCTGTGTCTGAGCACATA +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECTKGCA*AVSEHI
Trigger: TATGTGCTCAGACACAGCTCAAGCACACCCCTTAGT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACTACTTTCTGTCAAATTaGTCATTCCACTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: VVCTESWLHSAAPGIPDHYFLSN*SFHFPL
Trigger: CAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTA...GTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR GCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCGCCGCCGCCGCTGCTaGTTTGACTATTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGRRRRC*FDYSSF
Trigger: AAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCGCCGCCGCCGCTGCTaGTTTGACTATTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWRRRRC*FDYSSF
Trigger: AAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTCCTGAAGCCCTGAGATaGTCCATAAGATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECPEALR*SIRSPE
Trigger: TTCAGGGGATCTTATGGAGCATCTCAGGGCTTCAGG...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TYYCEWERLFDKRQRAWLHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...GAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR TCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCACAGACTTAGGTaGAGGCAGAGGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCGHRLR*RQRQWQ
Trigger: CTGCCATTGCCTCTGCCTTCACCTAAGTCTGTGCCC...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAGGGCACAGACTTAGGTaGAGGCAGAGGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKGHRLR*RQRQWQ
Trigger: CTGCCATTGCCTCTGCCTTCACCTAAGTCTGTGCCC...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCCATGAGAAGGGAGCATaGGACGAGAAATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: TVSGRDCLTKDKEHGSELHEKGA*DEKWGM
Trigger: CATTCCCCATTTCTCGTCTCATGCTCCCTTCTCATG...GAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR TCA 90 bp GTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGATGCCTGCAGACATCTaGAGGACAATTTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VSVHTVQVGKEDRSDWMQMPADI*RTISSR
Trigger: CCTACTGGAAATTGTCCTTCAGATGTCTGCAGGCAT...CTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp GTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGGAGGCAACCTTCAGTCTTCTCTaGCACCCAGTCATTTATATG +
Preference number: 4 (lower is better)
Translates to: VHTVQVGKEDRSDWMQEATFSLL*HPVIYM
Trigger: CATATAAATGACTGGGTGGCAGAGAAGACTGAAGGT...TGCCTCCTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATACTTTCTGTCAAATTaGTCATTCCACTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAYFLSN*SFHFPL
Trigger: CAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CAGATTATGAGATGTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGCAGTGCTTCCCTTTaGCCCCATGAAGACCATGGC +
Preference number: 4 (lower is better)
Translates to: QIMRCISTHSTSRQGRQKCSASL*PHEDHG
Trigger: GCCATGGTCTTCATGGGGGCAAAGGGAAGCACTGCA...CTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATACATCTCATAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGCCCTTGGCTTTGTGTaGAGTGTCACCTGGGCACTA +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERALGFV*SVTWAL
Trigger: TAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGGCCCTTGGCTTTGTGTaGAGTGTCACCTGGGCACTA +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWALGFV*SVTWAL
Trigger: TAGTGCCCAGGTGACACTGCACACAAAGCCAAGGGC...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGATCCACGAAGCACTTGTaGGCAACCTTGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERSTKHL*ATLDRG
Trigger: GCCTCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGA...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTGCACACGCTTTATTTTaGCATTCAAGCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECAHALF*HSSHCT
Trigger: GGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGC...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAYSQWL*NFQQRL
Trigger: AAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAATCAAATTGATGACCTaGAAAGATCTTAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAIKLMT*KDLKGG
Trigger: ACCTCCCTTAAGATCTTTCCAGGTCATCAATTTGAT...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGATCAGTGGTTGGGATaGGACGGGGAGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCDQWLG*DGEREK
Trigger: CTTCTCCCTCTCCCCGTCCCATCCCAACCACTGATC...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGGTGTTTTGTGGGACCCAAAGAAGCTCGCAGGTTGCAATTAGTTATCACACATCACTGTGTACTCACATaGCAGAGGGGCAAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: RCFVGPKEARRLQLVITHHCVLT*QRGKVV
Trigger: AACTACCTTGCCCCTCTGCCATGTGAGTACACAGTG...ATGTGTGATAACTAATTGCAACCTGCGAGCTTCTTTGGGTCCCACAAAACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CCA 90 bp GTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGGAAGACAGAAGTGACTaGATGCAGGAGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: VSVHTVQVGKEDRSDWMQEDRSD*MQEARV
Trigger: TACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTC...CTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR CAA 72 bp AGACTTTCACACACTATCCAGTGCACACGCTTTATTTaGGCATTCAAGCCACTGCACCAACTAGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: RLSHTIQCTRFI*AFKPLHQLGHR
Trigger: CCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGAAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 72 bp TTCAGGTGTTTTGTGGGACCCAAAGAAGCTCGCAGGTaGCAATTAGTTATCACACATCCTCCTGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: FRCFVGPKEARR*QLVITHPPVAL
Trigger: AAGTGCCACAGGAGGATGTGTGATAACTAATTGCAACCTGCGAGCTTCTTTGGGTCCCACAAAACACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp CAGATTATGAGATGTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QIMRCISTHSTSRQGRQKHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...CTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATACATCTCATAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR TCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCTTCCGGCAGATaGCTCAGAACCGTTCGATTG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIKASGR*LRTVRL
Trigger: CAATCGAACGGTTCTGAGTCATCTGCCGGAAGCCTT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR TCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGCTTCACGTCCGCCTTaGTTGAGGGCAAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIAASRPP*LRARLP
Trigger: CGGAAGCCTTGCCCTCAATCAAGGCGGACGTGAAGC...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR TCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCCGCCGCTGCTGCTTTaGCTATTCCTCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGPPLLL*LFLLCR
Trigger: TCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCACTCCATAAGATCCCCTaGAACAATGGGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKALHKIP*NNGHRL
Trigger: AAGTCTGTGCCCATTGTTTCAGGGGATCTTATGGAG...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ATGAGGTTGATACGGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTGGAGAACTGACTGGATaGTGGTGCTGTTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: MRLIREFMGHQITLSLIFGELTG*WCCSDR
Trigger: TCTGTCTGAACAGCACCATCATCCAGTCAGTTCTCC...AAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCCGTATCAACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTTGCAGTGCTTCCCTTTaGCCCCATGAAGACCATGGC +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCCSASL*PHEDHG
Trigger: GCCATGGTCTTCATGGGGGCAAAGGGAAGCACTGCA...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000397985.7
CDS-3UTR CCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAACTTGTGGGCAACCTTaGACAGAGGCACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKATCGQP*TEAHSS
Trigger: AGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGT...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGTGTGCAGTGTCACCTaGGCACTAGTCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCVCSVT*ALVPCS
Trigger: TGAACAGGGGACTAGTGCCCAGGTGACACTGCACAC...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CCTTTTATGAGGACATCAATCCCATTTATGAGGGCTTTTTCCTCAGGACCTAATGGCAAGGTAGTTCTCTaGGGCCCCTTTTATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PFMRTSIPFMRAFSSGPNGKVVL*GPFYED
Trigger: GTCCTCATAAAAGGGGCCCCAGAGAACTACCTTGCC...ATTAGGTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATGTCCTCATAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTAGCATCCAGTACCTCTaGAATCTTACCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECSIQYL*NLTFSL
Trigger: AAGACTGAAGGTAAGATTTCAGAGGTACTGGATGCT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TTTATTCCCAAGAAAAATGTAGGAGAATTCCAGTTGTTCTACATCGTTGCCCACCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FIPKKNVGEFQLFYIVAHHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...GTGGGCAACGATGTAGAACAACTGGAATTCTCCTACATTTTTCTTGGGAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQHREAE*PCSAPL
Trigger: AAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAAAGGCTTCCGGCAGATaGCTCAGAACCGTTCGATTG +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKKASGR*LRTVRL
Trigger: CAATCGAACGGTTCTGAGTCATCTGCCGGAAGCCTT...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACCGCCGCTGCTGCTTTaGCTATTCCTCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQPPLLL*LFLLCR
Trigger: TCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTAAGAGGGCTGGCTCCTaGAGCCCTGAGATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIAKRAGS*SPEMLH
Trigger: ATGGAGCATCTCAGGGCTTCAGGAGCCAGCCCTCTT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATATTTCAGCTGCACATaGGACACAGGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQYFSCT*DTGWLQ
Trigger: CTGCAGCCACCCTGTGTCTCATGTGCAGCTGAAATA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTTCATTACAAACTGTGTaGGACAGGGGGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCSLQTV*DRGHAG
Trigger: CCCTGCATGCCCCCTGTCTCACACAGTTTGTAATGA...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGACTAAGGGGTGTGCTTaGGCTGTGTCTGAGCACATA +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWTKGCA*AVSEHI
Trigger: TATGTGCTCAGACACAGCTCAAGCACACCCCTTAGT...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp CACCTCCCAAAGGTCCCACCTCTTAATACTGATACATTGGATGTTGGGTTTCAACATCAATCCCATTTATaGGGGCTTTTTCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HLPKVPPLNTDTLDVGFQHQSHL*GLFPQD
Trigger: GTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATG...TTGAAACCCAACATCCAATGTATCAGTATTAAGAGGTGGGACCTTTGGGAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECTQSFI*FLHSSV
Trigger: CACTGAAGAGTGCAGGAAGCATATAAATGACTGGGT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTACCTTCAGTCTTCTCTaGCACCCAGTCATTTATATG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECTFSLL*HPVIYM
Trigger: CATATAAATGACTGGGTGGCAGAGAAGACTGAAGGT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCACATTCCAGAAAAGTCTaGCTTGGCTTCGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAHSRKV*LGFVKS
Trigger: GCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATG...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTTTCTCATATGTAAGTaGTTTTTCCACCACGGCGAG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECFLICK*FFHHGE
Trigger: CTCGCCGTGGTGGAAAAAGCACTTACATATGAGAAA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CAGACATCTGAAGGACAATTTCCAGTAGGCAGTTTTCTATACAGCTCCAGACCTATGGGGTGCAGCAGATaGAGGAATGGAAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: QTSEGQFPVGSFLYSSRPMGCSR*RNGKCL
Trigger: AAGACATTTTCCATTCCTGCATCTGCTGCACCCCAT...AGGTCTGGAGCTGTATAGAAAACTGCCTACTGGAAATTGTCCTTCAGATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAGTCTGCACAGAATCTTaGCTCCATTCTGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKVCTES*LHSAAP
Trigger: CGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGAC...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGATCAGTGGTTGGGATaGGACGGGGAGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIADQWLG*DGEREK
Trigger: CTTCTCCCTCTCCCCGTCCCATCCCAACCACTGATC...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTATTAATTCAACTATGGCACTCATGCATCTaGGCCGCCCTTGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSSWAIKSHCHLSLLIQLWHSCI*AALDLH
Trigger: GTGAAGATCAAGGGCGGCCCAGATGCATGAGTGCCA...TAGTTGAATTAATAAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR TCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCTCCATAAGATCCCCTaGAACAATGGGCACAGACTT +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWLHKIP*NNGHRL
Trigger: AAGTCTGTGCCCATTGTTTCAGGGGATCTTATGGAG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGCTTCGTGGGAGAGATTGTTTaGCAAAAGACAAAGAGCATG +
Preference number: 4 (lower is better)
Translates to: SGRDCLTKDKEHGSELCFVGEIV*QKTKSM
Trigger: CATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCAC...GAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCAACTCCTCCAGCTCTaGCTGATAGAACTTCTGACA +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWQLLQL*LIELLT
Trigger: TGTCAGAAGTTCTATCAGGCAGAGCTGGAGGAGTTG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCCAACTCCTCCAGCTCTaGCTGATAGAACTTCTGACA +
Preference number: 4 (lower is better)
Translates to: IHTTVSGRDCLTKDKEHGQLLQL*LIELLT
Trigger: TGTCAGAAGTTCTATCAGGCAGAGCTGGAGGAGTTG...GCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTGCCACAGAACAAGATaGAGTTGGTTTTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWCHRTR*SWFCGA
Trigger: GGCACCACAAAACCAACTGCATCTTGTTCTGTGGCA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAGGTATGTACAGCAATTaGTCCTCTTTACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAGMYSN*SSLRRR
Trigger: TCTTCTCCGTAAAGAGGAGCAATTGCTGTACATACC...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCAGGCCCAAATTTCATaGATCTGCGGCCTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGQAQIS*ICGLSY
Trigger: ATAACTGAGGCCGCAGATGCATGAAATTTGGGCCTG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTCCTGAAGCCCTGAGATaGTCCATAAGATCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCPEALR*SIRSPE
Trigger: TTCAGGGGATCTTATGGAGCATCTCAGGGCTTCAGG...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AAGGAAGACAGAAGTGACTGGATGCAGGAGGCAAGAGTAAGGAGAAGTCTAAGATGGGTAGATCAGTGTTaGTGTGGCATAAATCTTAAC +
Preference number: 4 (lower is better)
Translates to: KEDRSDWMQEARVRRSLRWVDQC*CGINLN
Trigger: GTTAAGATTTATGCCACAGCAACACTGATCTACCCA...TCTTAGACTTCTCCTTACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAACTTGTGGGCAACCTTaGACAGAGGCACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERTCGQP*TEAHSS
Trigger: AGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGT...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGGCACACGCTTTATTTTaGCATTCAAGCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGAHALF*HSSHCT
Trigger: GGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGC...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGCACACGCTTTATTTTaGCATTCAAGCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIAHALF*HSSHCT
Trigger: GGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGCAGTGTCACCTaGGCACTAGTCCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIAVCSVT*ALVPCS
Trigger: TGAACAGGGGACTAGTGCCCAGGTGACACTGCACAC...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGTATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGYRVCP*LCVQCH
Trigger: GTGACACTGCACACAAAGCCAAGGGCAAACCCTATA...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGATATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERYRVCP*LCVQCH
Trigger: GTGACACTGCACACAAAGCCAAGGGCAAACCCTATA...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTACCTTTCAGTCCTGTaGATTAATTTTGCCCAAACC +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECYLSVL*INFAQT
Trigger: GGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTTATTCCCAAGAAAAATGTAGGAGAATTCCAGTTGTTCTACATCGTTGCCCACTCACACATCCTCCTGTaGCACTTCCACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FIPKKNVGEFQLFYIVAHSHILL*HFHSAC
Trigger: ACAAGCACTGTGGAAGTGCCACAGGAGGATGTGTGA...GTGGGCAACGATGTAGAACAACTGGAATTCTCCTACATTTTTCTTGGGAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR CAA 72 bp CATGCAATACATACTACTGTGAGTGGGAGAGATTGTTaGACAAAAGACAAAGAGCATGGCTCAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: HAIHTTVSGRDC*TKDKEHGSELC
Trigger: GCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTATTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
3UTR CAA 72 bp GTTATCACACATCCTCCTGTGGCACTTCCACAGTGCTaGTCTTTTATGACATTGCCTCTTTTAGAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VITHPPVALPQC*SFMTLPLLESF
Trigger: GAAACTCTCTAAAAGAGGCAATGTCATAAAAGACAAGCACTGTGGAAGTGCCACAGGAGGATGTGTGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR CAA 72 bp GGAAGACGGCATTCAGGTTATAGGACATGCTTAACTTaGCTTAGTGCAACGTTTGCTTCAACACTATTAGGC +
Preference number: 4 (lower is better)
Translates to: GRRHSGYRTCLT*LSATFASTLLG
Trigger: GCCTAATAGTGTTGAAGCAAACGTTGCACTAAGCAAAGTTAAGCATGTCCTATAACCTGAATGCCGTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp TTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGCTTCTGAGTCTAATGAGGAGCATCCAGTACCTCTaGAATCTTACCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FDKRQRAWLRTLLLSLMRSIQYL*NLTFSL
Trigger: AAGACTGAAGGTAAGATTTCAGAGGTACTGGATGCT...CCTCATTAGACTCAGAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR TCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCCTAAAGTGCATTGCTaGGTCCCTGAACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWPKVHC*VPELVS
Trigger: AGATACAAGTTCAGGGACTCAGCAATGCACTTTAGG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAAGGGAGAAGGAAGAGTaGGAAATTACAAAGATGCAA +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAREKEE*EITKMQ
Trigger: TTGCATCTTTGTAATTTCTCACTCTTCCTTCTCCCT...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTACTACAAAGCATAGATaGTGTATGGTTCCATGTATG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECTTKHR*CMVPCM
Trigger: CATACATGGAACCATACATCATCTATGCTTTGTAGT...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GAAGGACAATTTCCAGTAGGCAGTTTTCTATACAGCTCCAGACCTGAAGATGAAACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EGQFPVGSFLYSSRPEDETQSFI*FLHSSV
Trigger: CACTGAAGAGTGCAGGAAGCATATAAATGACTGGGT...TTCATCTTCAGGTCTGGAGCTGTATAGAAAACTGCCTACTGGAAATTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTACTTTCTGTCAAATTaGTCATTCCACTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECYFLSN*SFHFPL
Trigger: CAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTCTGAGTCTAATGAGGGGACTATTCAGGGTTAAATCAGAGGGCAACTCAGAGTACTTTCTGTCAAATTaGTCATTCCACTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLSLMRGLFRVKSEGNSEYFLSN*SFHFPL
Trigger: CAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTA...CTCTGAGTTGCCCTCTGATTTAACCCTGAATAGTCCCCTCATTAGACTCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGACATTCCAGAAAAGTCTaGCTTGGCTTCGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERHSRKV*LGFVKS
Trigger: GCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATG...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTTTACTCTATAGGGTTTaGCCTTGGCTTTGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLILLYRV*PWLCVQ
Trigger: CTGCACACAAAGCCAAGGGCAAACCCTATAGAGTAA...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAATTAACAGCAGTGATTaGTGTGTGTTGGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAINSSD*CVLELW
Trigger: CCACAATTCCAACACACAGCAATCACTGCTGTTAAT...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCACGAGAAATGGGGAATaGAAGAAGACTTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: TYYCEWERLFDKRQRAWLTRNGE*KKTSSA
Trigger: TGCTGATGAAGTCTTCTTGCATTCCCCATTTCTCGT...GAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp CAGACATCTGAAGGACAATTTCCAGTAGGCAGTTTTCTATACAGCTCCAGACCTAAGTTAAGTGTGAAATaGCTGCAGACATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QTSEGQFPVGSFLYSSRPKLSVK*LQTSEG
Trigger: TCCTTCAGATGTCTGCAGGCATTTCACACTTAACTT...AGGTCTGGAGCTGTATAGAAAACTGCCTACTGGAAATTGTCCTTCAGATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAACTTGTGGGCAACCTTaGACAGAGGCACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQTCGQP*TEAHSS
Trigger: AGAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTCTGCACAGAATCTTaGCTCCATTCTGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIAVCTES*LHSAAP
Trigger: CGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGAC...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATATAGGGTTTGCCCTTaGCTTTGTGTGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKYRVCP*LCVQCH
Trigger: GTGACACTGCACACAAAGCCAAGGGCAAACCCTATA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 72 bp GACTCAGTGGTGTGTTGCGTAAGTTCCTTTGGTATTTaGTGTGTTTCAGAGGGAAAAGGAATGGAAAGAACA +
Preference number: 4 (lower is better)
Translates to: DSVVCCVSSFGI*CVSEGKGMERT
Trigger: TGTTCTTTCCATTCCTTTTCCCTCTGAAACACACAAAATACCAAAGGAACTTACGCAACACACCACTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 72 bp CCTGTGGCACTTCCACAGTGCTTGTCTTTTATGACATaGCCTCTTTTAGAGAGTTTCAGCCAATTATTTGGT +
Preference number: 4 (lower is better)
Translates to: PVALPQCLSFMT*PLLESFSQLFG
Trigger: ACCAAATAATTGGCTGAAACTCTCTAAAAGAGGCAATGTCATAAAAGACAAGCACTGTGGAAGTGCCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAGGCTTATGGAAAGATaGGAAGGAGCTGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIRLMER*EGAVFI
Trigger: AATGAAGACAGCTCCTTCTCATCTTTCCATAAGCCT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAACCTAAAGTGCATTGCTaGGTCCCTGAACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKPKVHC*VPELVS
Trigger: AGATACAAGTTCAGGGACTCAGCAATGCACTTTAGG...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGGTGTCTGAGCACATATaGTTAGTTAGAGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGVSEHI*LVRGLS
Trigger: ACTGAGTCCTCTAACTAATCATATGTGCTCAGACAC...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTACCTTCAGTCTTCTCTaGCACCCAGTCATTTATATG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLITFSLL*HPVIYM
Trigger: CATATAAATGACTGGGTGGCAGAGAAGACTGAAGGT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCACCTTCAGTCTTCTCTaGCACCCAGTCATTTATATG +
Preference number: 4 (lower is better)
Translates to: IHTTVSGRDCLTKDKEHGTFSLL*HPVIYM
Trigger: CATATAAATGACTGGGTGGCAGAGAAGACTGAAGGT...GCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAACATTCCAGAAAAGTCTaGCTTGGCTTCGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKHSRKV*LGFVKS
Trigger: GCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATG...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACATTCCAGAAAAGTCTaGCTTGGCTTCGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQHSRKV*LGFVKS
Trigger: GCTTTTGACGAAGCCAAGGCAGACTTTTCTGGAATG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGGTATGTACAGCAATTaGTCCTCTTTACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIGMYSN*SSLRRR
Trigger: TCTTCTCCGTAAAGAGGAGCAATTGCTGTACATACC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTTTCCTCCTTTGTAGATaGTTCACGTCCGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCFLLCR*FTSALI
Trigger: AATCAAGGCGGACGTGAAGCATCTACAAAGGAGGAA...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTTTTCTCATATGTAAGTaGTTTTTCCACCACGGCGAG +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIFLICK*FFHHGE
Trigger: CTCGCCGTGGTGGAAAAAGCACTTACATATGAGAAA...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTTTCTCATATGTAAGTaGTTTTTCCACCACGGCGAG +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWFLICK*FFHHGE
Trigger: CTCGCCGTGGTGGAAAAAGCACTTACATATGAGAAA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACAGAAAAGTCTGCCTTaGCTTCGTCAAAAGCATCGA +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQQKSLP*LRQKHR
Trigger: TCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAAAGAAAAGAAAAGGGTaGTCTGCACAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERKKRKG*SAQNLG
Trigger: GCCAAGATTCTGTGCAGACCACCCTTTTCTTTTCTT...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAGAAAAGAAAAGGGTaGTCTGCACAGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWKKRKG*SAQNLG
Trigger: GCCAAGATTCTGTGCAGACCACCCTTTTCTTTTCTT...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTCCTCCAGCTTTAATCTaGGAAGGAAAACTTGAACCT +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIPPALI*EGKLEP
Trigger: AGGTTCAAGTTTTCCTTCCCAGATTAAAGCTGGAGG...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTGTATCTCAGGCTTATaGAAAGATGAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWCISGL*KDEKEL
Trigger: CAGCTCCTTCTCATCTTTCCATAAGCCTGAGATACA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGATGTATCTCAGGCTTATaGAAAGATGAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERCISGL*KDEKEL
Trigger: CAGCTCCTTCTCATCTTTCCATAAGCCTGAGATACA...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTTGCGTAAGTTCCTTTaGTATTTTGTGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TRFILAFKPLHQLGHRECLRKFL*YFVCFR
Trigger: TCTGAAACACACAAAATACCAAAGGAACTTACGCAA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp ATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCAAAAGACAAAGAGCATaGCTCAGAACTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IHTTVSGRDCLTKDKEHGKRQRA*LRTLLL
Trigger: CAGAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTT...GCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAAGCATCCAGTACCTCTaGAATCTTACCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQSIQYL*NLTFSL
Trigger: AAGACTGAAGGTAAGATTTCAGAGGTACTGGATGCT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAAGGCTTATGGAAAGATaGGAAGGAGCTGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQRLMER*EGAVFI
Trigger: AATGAAGACAGCTCCTTCTCATCTTTCCATAAGCCT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAAGGCTTATGGAAAGATaGGAAGGAGCTGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKRLMER*EGAVFI
Trigger: AATGAAGACAGCTCCTTCTCATCTTTCCATAAGCCT...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGTGTCTGAGCACATATaGTTAGTTAGAGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCVSEHI*LVRGLS
Trigger: ACTGAGTCCTCTAACTAATCATATGTGCTCAGACAC...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp CAGATTATGAGATGTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGCTAGGTACAGAGAGATaGAGACAGATTATGAGATGT +
Preference number: 4 (lower is better)
Translates to: QIMRCISTHSTSRQGRQKLGTER*RQIMRC
Trigger: ACATCTCATAATCTGTCTTCATCTCTCTGTACCTAG...CTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATACATCTCATAATCTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR TCA 90 bp ACTGGCCCTAGGTACAGAGAGATGAAGACAGATTATGAGATGTATCAGTACACAACATGGGGTAGATACTaGAGGCTTTTCTTATATAAC +
Preference number: 4 (lower is better)
Translates to: TGPRYREMKTDYEMYQYTTWGRY*RLFLYN
Trigger: GTTATATAAGAAAAGCCTTCAGTATCTACCCCATGT...TGTGTACTGATACATCTCATAATCTGTCTTCATCTCTCTGTACCTAGGGCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQTQSFI*FLHSSV
Trigger: CACTGAAGAGTGCAGGAAGCATATAAATGACTGGGT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NTYYCEWERLFDKRQRAWTQSFI*FLHSSV
Trigger: CACTGAAGAGTGCAGGAAGCATATAAATGACTGGGT...CCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR GCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTACCTTCAGTCTTCTCTaGCACCCAGTCATTTATATG +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCTFSLL*HPVIYM
Trigger: CATATAAATGACTGGGTGGCAGAGAAGACTGAAGGT...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp ATGAGGTTGATACGGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTTACTTTCTGTCAAATTaGTCATTCCACTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: MRLIREFMGHQITLSLIFYFLSN*SFHFPL
Trigger: CAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTA...AAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCCGTATCAACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAGGTATGTACAGCAATTaGTCCTCTTTACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKGMYSN*SSLRRR
Trigger: TCTTCTCCGTAAAGAGGAGCAATTGCTGTACATACC...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATCACACACTATCCAGTaGACACGCTTTATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKSHTIQ*TRFILA
Trigger: TGCCAAAATAAAGCGTGTGCACTGGATAGTGTGTGA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCAAATTTCATGCATCTaGGGCCTCAGTTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWQISCI*GLSYSQ
Trigger: TTGAGAATAACTGAGGCCGCAGATGCATGAAATTTG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAATTAACAGCAGTGATTaGTGTGTGTTGGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERINSSD*CVLELW
Trigger: CCACAATTCCAACACACAGCAATCACTGCTGTTAAT...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAAATTTTGCCCAAACCTaGTTTGGAAAACATGATCCC +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERNFAQT*FGKHDP
Trigger: GGGATCATGTTTTCCAAAGCAGGTTTGGGCAAAATT...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAATTTTGCCCAAACCTaGTTTGGAAAACATGATCCC +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWNFAQT*FGKHDP
Trigger: GGGATCATGTTTTCCAAAGCAGGTTTGGGCAAAATT...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAATTTTGCCCAAACCTaGTTTGGAAAACATGATCCC +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLINFAQT*FGKHDP
Trigger: GGGATCATGTTTTCCAAAGCAGGTTTGGGCAAAATT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACCTCCAGCTTTAATCTaGGAAGGAAAACTTGAACCT +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQPPALI*EGKLEP
Trigger: AGGTTCAAGTTTTCCTTCCCAGATTAAAGCTGGAGG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTCCTCCAGCTTTAATCTaGGAAGGAAAACTTGAACCT +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCPPALI*EGKLEP
Trigger: AGGTTCAAGTTTTCCTTCCCAGATTAAAGCTGGAGG...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTCTCAGTTATTCTCAATaGCTCTGGAACTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLILSYSQ*LWNFQQ
Trigger: TTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAG...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGCTCAGTTATTCTCAATaGCTCTGGAACTTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWLSYSQ*LWNFQQ
Trigger: TTGCTGAAAGTTCCAGAGCCATTGAGAATAACTGAG...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTTACCTTTCAGTCCTGTaGATTAATTTTGCCCAAACC +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIYLSVL*INFAQT
Trigger: GGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTA...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGTACCTTTCAGTCCTGTaGATTAATTTTGCCCAAACC +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGYLSVL*INFAQT
Trigger: GGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTA...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 72 bp AATCCAGCCACACAGTGGAATACTATGCACATCAAATaGATGACCTGGAAAGATCTTAAGGGAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: NPATQWNTMHIK*MTWKDLKGGFS
Trigger: TGAAAAACCTCCCTTAAGATCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
3UTR CAA 72 bp CACCTCCCAAAGGTCCCACCTCTTAATACTGATACATaGGATGTTGGGTTTCAACATATAAATTTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HLPKVPPLNTDT*DVGFQHINFGG
Trigger: TCCACCAAAATTTATATGTTGAAACCCAACATCCAATGTATCAGTATTAAGAGGTGGGACCTTTGGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAACTGGGAAGGAAAACTTaGACCTTACTTTTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKLGRKT*TLLFVN
Trigger: GTTGACAAAAAGTAAGGTTCAAGTTTTCCTTCCCAG...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAACATGATCCCTAAATaGATGTGGCCTAACAGATAT +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLINMIPK*MWPNRY
Trigger: ATATCTGTTAGGCCACATTCATTTAGGGATCATGTT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTTTCCTCCTTTGTAGATaGTTCACGTCCGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIAFLLCR*FTSALI
Trigger: AATCAAGGCGGACGTGAAGCATCTACAAAGGAGGAA...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CCTTTTATGAGGACATCAATCCCATTTATGAGGGCTTTTTCCTCAGGACCTAATTCAGGTTATAGGACATaGTTAACTTTGCTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: PFMRTSIPFMRAFSSGPNSGYRT*LTLLSA
Trigger: TGCACTAAGCAAAGTTAAGCATGTCCTATAACCTGA...ATTAGGTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATGTCCTCATAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTCAGAAAAGTCTGCCTTaGCTTCGTCAAAAGCATCGA +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIAQKSLP*LRQKHR
Trigger: TCGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTG...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTTATTCTCAATGGCTCTaGAACTTTCAGCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIYSQWL*NFQQRL
Trigger: AAGTCTTTGCTGAAAGTTCCAGAGCCATTGAGAATA...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TGGAAAGTTGTGAACAGATGTATTGTTCAATTAGATTTCTGTGATTGGTTCTGGGTACTGACCACTTACTaGGTAGATCAGTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WKVVNRCIVQLDFCDWFWVLTTY*VDQCCC
Trigger: ACAGCAACACTGATCTACCCAGTAAGTGGTCAGTAC...CCAGAACCAATCACAGAAATCTAATTGAACAATACATCTGTTCACAACTTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
3UTR CAA 72 bp ATTCCAGTTGTTCTACATCGTTGCCCACTCTTGATGTaGTCAGTGGTTTTAATTTTACCTACTTTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: IPVVLHRCPLLM*SVVLILPTLVE
Trigger: CTCTACCAAAGTAGGTAAAATTAAAACCACTGACAACATCAAGAGTGGGCAACGATGTAGAACAACTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTACTACAAAGCATAGATaGTGTATGGTTCCATGTATG +
Preference number: 4 (lower is better)
Translates to: REGCISLLTAVIAVCWNCTTKHR*CMVPCM
Trigger: CATACATGGAACCATACATCATCTATGCTTTGTAGT...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIATQSFI*FLHSSV
Trigger: CACTGAAGAGTGCAGGAAGCATATAAATGACTGGGT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATACTTTCTGTCAAATTaGTCATTCCACTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKYFLSN*SFHFPL
Trigger: CAAGGGAAAGTGGAATGAGCAATTTGACAGAAAGTA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGGAGAAATTACAAAGATaGAAGAAGGAATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWEKLQR*KKEFGS
Trigger: ACTCCCAAATTCCTTCTTGCATCTTTGTAATTTCTC...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGAGAAATTACAAAGATaGAAGAAGGAATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIEKLQR*KKEFGS
Trigger: ACTCCCAAATTCCTTCTTGCATCTTTGTAATTTCTC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGAGAAATTACAAAGATaGAAGAAGGAATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KSSHTVEYYAHQIDDLEREKLQR*KKEFGS
Trigger: ACTCCCAAATTCCTTCTTGCATCTTTGTAATTTCTC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGTTGCGTAAGTTCCTTTaGTATTTTGTGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGLRKFL*YFVCFR
Trigger: TCTGAAACACACAAAATACCAAAGGAACTTACGCAA...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTCGATGGTTTGTTTCATaGAAAATGTGTCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIRWFVS*KMCQNL
Trigger: TAAGTTCTGACACATTTTCCATGAAACAAACCATCG...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGACATACTACTGTGAGTaGGAGAGATTGTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NTYYCEWERLFDKRQRAWTYYCE*ERLFDK
Trigger: TTTGTCAAACAATCTCTCCCACTCACAGTAGTATGT...CCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CCA 90 bp TTGGATGTTGGGTTTCAACATATAAATTTTGGTGGAAGACGGCATTCAGGTTATTTGGTAGAGTTGTGGTaGTATTTCACTGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: LDVGFQHINFGGRRHSGYLVELW*YFTVHF
Trigger: GAAATGCACAGTGAAATACCACCACAACTCTACCAA...ATAACCTGAATGCCGTCTTCCACCAAAATTTATATGTTGAAACCCAACATCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CCA 90 bp ATTTTAGAGGCTGGGAAGTCCAAAATCAAAGTACCATTATATTTGATGTCTGGTTCTCTGCTTTATAGATaGCACCTTCTCACTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ILEAGKSKIKVPLYLMSGSLLYR*HLLTVY
Trigger: GTACACAGTGAGAAGGTGCCATCTATAAAGCAGAGA...ACCAGACATCAAATATAATGGTACTTTGATTTTGGACTTCCCAGCCTCTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
3UTR CAA 72 bp GAGAGTACAAACCAGTGTAACTTTCTAGGGACCAATTaGGAAGAAGTCTCAAAATGTGCTCAACTTTTATCT +
Preference number: 4 (lower is better)
Translates to: ESTNQCNFLGTN*EEVSKCAQLLS
Trigger: AGATAAAAGTTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTTTGTACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATTGCGTAAGTTCCTTTaGTATTTTGTGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQLRKFL*YFVCFR
Trigger: TCTGAAACACACAAAATACCAAAGGAACTTACGCAA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAACGATGGTTTGTTTCATaGAAAATGTGTCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKRWFVS*KMCQNL
Trigger: TAAGTTCTGACACATTTTCCATGAAACAAACCATCG...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CCA 90 bp TTTATTCCCAAGAAAAATGTAGGAGAATTCCAGTTGTTCTACATCGTTGCCCACTACAATTTTAGAGGCTaGGAAGTCCAAAATCAAAGT +
Preference number: 4 (lower is better)
Translates to: FIPKKNVGEFQLFYIVAHYNFRG*EVQNQS
Trigger: ACTTTGATTTTGGACTTCCCAGCCTCTAAAATTGTA...GTGGGCAACGATGTAGAACAACTGGAATTCTCCTACATTTTTCTTGGGAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR TCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTAACATGATCCCTAAATaGATGTGGCCTAACAGATAT +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIANMIPK*MWPNRY
Trigger: ATATCTGTTAGGCCACATTCATTTAGGGATCATGTT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR TCA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTACTACAAAGCATAGATaGTGTATGGTTCCATGTATG +
Preference number: 4 (lower is better)
Translates to: LHTHNREGCISLLTAVIATTKHR*CMVPCM
Trigger: CATACATGGAACCATACATCATCTATGCTTTGTAGT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR GCA 90 bp TTATTTGGTAGAATATCCCTCAATTCAATGCCGTCTGATGTTTCTGTACTTACAGGTGGTATTTCACTGTaGATTTCATATGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: LFGRISLNSMPSDVSVLTGGISL*ISYECL
Trigger: AAGACATTCATATGAAATGCACAGTGAAATACCACC...TGTAAGTACAGAAACATCAGACGGCATTGAATTGAGGGATATTCTACCAAATAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS GCA 90 bp CCCACCTCCTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTaGTGCTTTGACTATTCCTCCTTTGTAGATGCTTCACGTCCGCCT +
Preference number: 5 (lower is better)
Translates to: PTSCCCCCCRRRRRR*CFDYSSFVDASRPP
Trigger: AGGCGGACGTGAAGCATCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353706.6
CDS GCA 90 bp AGTGCCTCCTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTaGTGCTTTGACTATTCCTCCTTTGTAGATGCTTCACGTCCGCCT +
Preference number: 5 (lower is better)
Translates to: SASCCCCCCRRRRRR*CFDYSSFVDASRPP
Trigger: AGGCGGACGTGAAGCATCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542677.5
CDS GCA 90 bp AAGGTCTCCTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTaGTGCTTTGACTATTCCTCCTTTGTAGATGCTTCACGTCCGCCT +
Preference number: 5 (lower is better)
Translates to: KVSCCCCCCRRRRRR*CFDYSSFVDASRPP
Trigger: AGGCGGACGTGAAGCATCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397985.7
CDS TCA 90 bp CTGCTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCTGCTTTaGCTATTCCTCCTTTGTAGATGCTTCACGTCCGCCTTGATTGAG +
Preference number: 5 (lower is better)
Translates to: LLLLLLPPPPPPLLL*LFLLCRCFTSALIE
Trigger: CTCAATCAAGGCGGACGTGAAGCATCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS GCA 90 bp AAGTGCCATTTGCTTCACAGAGGTCATCCATCAGAGAAGGTCTCCTaGTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KCHLLHRGHPSEKVS*CCCCCRRRRRRCCF
Trigger: AAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGACCTTCTCTGATGGATGACCTCTGTGAAGCAAATGGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397985.7
ENST00000397988.7
ENST00000636430.1
CDS GCA 90 bp TCTCCGTCTTTGTATAAACAAAGTGCCTCCTGCTGCTGCTGCTGCTaGCGCCGCCGCCGCCGCCGCTGCTGCTTTGACTATTCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SPSLYKQSASCCCCC*RRRRRRCCFDYSSF
Trigger: AAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGGCACTTTGTTTATACAAAGACGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542677.5
CDS-3UTR CAA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATGCTTCACGTCCGCCTaGATTGAGGGCAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPCFTSA*IEGKAS
Trigger: GGAAGCCTTGCCCTCAATCAAGGCGGACGTGAAGCA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR CAA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTGCTTCACGTCCGCCTaGATTGAGGGCAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIACFTSA*IEGKAS
Trigger: GGAAGCCTTGCCCTCAATCAAGGCGGACGTGAAGCA...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR CAA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCGGTTTGCCCTTGGCTTaGTGTGCAGTGTCACCTGGG +
Preference number: 5 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAGLPLA*CAVSPG
Trigger: CCCAGGTGACACTGCACACAAAGCCAAGGGCAAACC...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS TCA 90 bp CTTTTTCCACCACGGCGAGGTCCGTGTTGTCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTTCCACATAGGGCAGCTCCAGGACCT +
Preference number: 5 (lower is better)
Translates to: LFPPRRGPCCHREAE*PCSAPLPHRAAPGP
Trigger: AGGTCCTGGAGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATGACAACACGGACCTCGCCGTGGTGGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS TCA 90 bp TCAGTGTATCCACGGCGAGGTCCGTGTTGTCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTTCCACATAGGGCAGCTCCAGGACCT +
Preference number: 5 (lower is better)
Translates to: SVYPRRGPCCHREAE*PCSAPLPHRAAPGP
Trigger: AGGTCCTGGAGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATGACAACACGGACCTCGCCGTGGATACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp GTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: VVCTESWLHSAAPGIPDHTARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...GTGGTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS TCA 90 bp ATCACTCTTTCACGGCGAGGTCCGTGTTGTCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTTCCACATAGGGCAGCTCCAGGACCT +
Preference number: 5 (lower is better)
Translates to: ITLSRRGPCCHREAE*PCSAPLPHRAAPGP
Trigger: AGGTCCTGGAGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATGACAACACGGACCTCGCCGTGAAAGAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp AGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACCACTTGTGGGCAACCTaGGACAGAGGCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: RVVCTESWLHSAAPGIPDHLWAT*DRGTFF
Trigger: GAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGTG...GTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR CAA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCAGGGTATGTACAGCAATaGCTCCTCTTTACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPGYVQQ*LLFTEK
Trigger: CTTCTCCGTAAAGAGGAGCAATTGCTGTACATACCC...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AGAAAAGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCTCACAAGGACCAGCTTaGTCAGGGGATCGACTGTCC +
Preference number: 5 (lower is better)
Translates to: RKGWSAQNLGSILLHREFSQGPA*SGDRLS
Trigger: GGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGA...GAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS-3UTR CAA 90 bp AGGGTGGTCTGCACAGAATCTTGGCTCCATTCTGCTGCACCGGGAATTCCTGACTGCACACGCTTTATTTaGGCATTCAAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: RVVCTESWLHSAAPGIPDCTRFI*AFKPLH
Trigger: GTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCA...GTCAGGAATTCCCGGTGCAGCAGAATGGAGCCAAGATTCTGTGCAGACCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295211.5
CDS TCA 90 bp TGCTGCTTTGACTATTCCTCCTTTGTAGATGCTTCACGTCCGCCTTaGTTGAGGGCAAGGCTTCCGGCAGATGACTCAGAACCGTTCGAT +
Preference number: 5 (lower is better)
Translates to: CCFDYSSFVDASRPP*LRARLPADDSEPFD
Trigger: ATCGAACGGTTCTGAGTCATCTGCCGGAAGCCTTGCCCTCAATCAAGGCGGACGTGAAGCATCTACAAAGGAGGAATAGTCAAAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS-3UTR CAA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCATGCACACGCTTTATTTaGGCATTCAAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: NCVRQGACRAVYVTVTEACTRFI*AFKPLH
Trigger: GTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCA...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAGCTGAGTCCCTGAACTaGTATCTCAGGCTTATGGAA +
Preference number: 5 (lower is better)
Translates to: NCVRQGACRAVYVTVTEAAESLN*YLRLME
Trigger: TTCCATAAGCCTGAGATACAAGTTCAGGGACTCAGC...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GGTGAAGGCAGAGGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCGCTGTAGTTTCCAAATaGCTGCCACAACGCAATTTT +
Preference number: 5 (lower is better)
Translates to: GEGRGNGRHPKHSKTSIAAVVSK*LPQRNF
Trigger: AAAATTGCGTTGTGGCAGCAATTTGGAAACTACAGC...GGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCCTCTGCCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATGCTGTGTGTTGGAATaGTGGGTGACTTCAATTTTT +
Preference number: 5 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPCCVLE*WVTSIF
Trigger: AAAAATTGAAGTCACCCACAATTCCAACACACAGCA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GTATCAGTACACACAGTACAAGTAGGCAAGGAAGACAGAAGTGACTGGATGCAGTCACAAGGACCAGCTTaGTCAGGGGATCGACTGTCC +
Preference number: 5 (lower is better)
Translates to: VSVHTVQVGKEDRSDWMQSQGPA*SGDRLS
Trigger: GGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGA...CTGCATCCAGTCACTTCTGTCTTCCTTGCCTACTTGTACTGTGTGTACTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKATARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GGCAATGGCAGGCACCCCAAACACTCCAAAACCAGCATAGCCTTCCCAGGCCCATTTCTAGGGACCAATTaGGAAGAAGTCTCAAAATGT +
Preference number: 5 (lower is better)
Translates to: GNGRHPKHSKTSIAFPGPFLGTN*EEVSKC
Trigger: ACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAA...TGGGCCTGGGAAGGCTATGCTGGTTTTGGAGTGTTTGGGGTGCCTGCCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGTCACAAGGACCAGCTTaGTCAGGGGATCGACTGTCC +
Preference number: 5 (lower is better)
Translates to: CEWERLFDKRQRAWLRTLSQGPA*SGDRLS
Trigger: GGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGA...CAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp ACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: TYYCEWERLFDKRQRAWLTARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...GAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp GAAGGACAATTTCCAGTAGGCAGTTTTCTATACAGCTCCAGACCTGAAGATGAAACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: EGQFPVGSFLYSSRPEDETARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...TTCATCTTCAGGTCTGGAGCTGTATAGAAAACTGCCTACTGGAAATTGTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAACCTCCACGAAGCACTaGTGGGCAACCTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKATSTKH*WATLDR
Trigger: TCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGT...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp CATGCATCTGGGCCGCCCTTGATCTTCACCCAGCTGGTGTTTGATCATAAATGGAGAAGAATACGTTTCTaGAGTTGTCCTCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: HASGPPLIFTQLVFDHKWRRIRF*SCPLPP
Trigger: TGGGGGAAGAGGACAACTCAAGAAACGTATTCTTCT...CCATTTATGATCAAACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCACACTTGTGGGCAACCTaGGACAGAGGCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAHLWAT*DRGTFF
Trigger: GAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGTG...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGAAAGAGGTTTGCCCTTGGCTTaGTGTGCAGTGTCACCTGGG +
Preference number: 5 (lower is better)
Translates to: KSSHTVEYYAHQIDDLERGLPLA*CAVSPG
Trigger: CCCAGGTGACACTGCACACAAAGCCAAGGGCAAACC...TCTTTCCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGCATCAGCATCCTTGTTaGTCCTCTGCCTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CEWERLFDKRQRAWLRTLHQHPC*SSACPG
Trigger: TCCAGGACAGGCAGAGGACAAACAAGGATGCTGATG...CAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp GGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTATTAATTCAACTAGCATCTGGGCCGCCCTaGATCTTCACCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GSSWAIKSHCHLSLLIQLASGPP*IFTQLV
Trigger: CACCAGCTGGGTGAAGATCAAGGGCGGCCCAGATGC...TAGTTGAATTAATAAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS CCA 90 bp TCTGGGCCGCCCTTGATCTTCACCCAGCTGGTGTTTGATCATAAATaGAGGTTAGAATCCTTAGAAACTCAGGTGCTGATAATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SGPPLIFTQLVFDHK*RLESLETQVLIMLA
Trigger: TGCCAACATTATCAGCACCTGAGTTTCTAAGGATTCTAACCTCCATTTATGATCAAACACCAGCTGGGTGAAGATCAAGGGCGGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQTARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp CCACAGTGCTTGTCTTTTATGACATTGCCTCTTTTAGAGAGTTTCAGCCAATTAACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: PQCLSFMTLPLLESFSQLTARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...TAATTGGCTGAAACTCTCTAAAAGAGGCAATGTCATAAAAGACAAGCACTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCACCAGAAAAGTCTGCCTaGGCTTCGTCAAAAGCATCG +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAPEKSA*ASSKAS
Trigger: CGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTGG...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTACCTCCACGAAGCACTaGTGGGCAACCTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: LYFGIQATAPTRSQGMLITSTKH*WATLDR
Trigger: TCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGACCTCCACGAAGCACTaGTGGGCAACCTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGTSTKH*WATLDR
Trigger: TCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGT...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTGGGTATGTACAGCAATaGCTCCTCTTTACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TRFILAFKPLHQLGHRECGYVQQ*LLFTEK
Trigger: CTTCTCCGTAAAGAGGAGCAATTGCTGTACATACCC...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAAGTTCCTTTGGTATTTaGTGTGTTTCAGAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: NCVRQGACRAVYVTVTEASSFGI*CVSEGK
Trigger: TTTTCCCTCTGAAACACACAAAATACCAAAGGAACT...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AACTGTGTGAGACAGGGGGCATGCAGGGCTGTCTATGTGACAGTGACAGAAGCAACTATGCACATCAAATaGATGACCTGGAAAGATCTT +
Preference number: 5 (lower is better)
Translates to: NCVRQGACRAVYVTVTEATMHIK*MTWKDL
Trigger: AAGATCTTTCCAGGTCATCAATTTGATGTGCATAGT...TGCTTCTGTCACTGTCACATAGACAGCCCTGCATGCCCCCTGTCTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS GCA 90 bp TCTGAAATCTTACCTTCAGTCTTCTCTGCCACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTGTCTTCAGCAAAGGACAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SEILPSVFSATQSFI*FLHSSVSSAKDNSS
Trigger: GGAGGAGTTGTCCTTTGCTGAAGACACTGAAGAGTGCAGGAAGCATATAAATGACTGGGTGGCAGAGAAGACTGAAGGTAAGATTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000397988.7
ENST00000441827.5
ENST00000542677.5
ENST00000636430.1
CDS-3UTR CAA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTTCACAAGGACCAGCTTaGTCAGGGGATCGACTGTCC +
Preference number: 5 (lower is better)
Translates to: REGCISLLTAVIAVCWNCSQGPA*SGDRLS
Trigger: GGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGA...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGCACTTGTGGGCAACCTaGGACAGAGGCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGHLWAT*DRGTFF
Trigger: GAAGAATGTGCCTCTGTCCAAGGTTGCCCACAAGTG...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATGCACACGCTTTATTTaGGCATTCAAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKACTRFI*AFKPLH
Trigger: GTGCAGTGGCTTGAATGCCAAAATAAAGCGTGTGCA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAGCTGAGTCCCTGAACTaGTATCTCAGGCTTATGGAA +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKAAESLN*YLRLME
Trigger: TTCCATAAGCCTGAGATACAAGTTCAGGGACTCAGC...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp ACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCTCACTTCATCAGCATCCTaGTTTGTCCTCTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: TYYCEWERLFDKRQRAWLTSSAS*FVLCLS
Trigger: GGACAGGCAGAGGACAAACAAGGATGCTGATGAAGT...GAGCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp AAGGAAGACAGAAGTGACTGGATGCAGGAGGCAAGAGTAAGGAGAAGTCTAAGATGTCACAGAAGAAGCTaGTGCTTCTCAGTGTATCCA +
Preference number: 5 (lower is better)
Translates to: KEDRSDWMQEARVRRSLRCHRRS*CFSVYP
Trigger: TGGATACACTGAGAAGCACAAGCTTCTTCTGTGACA...TCTTAGACTTCTCCTTACTCTTGCCTCCTGCATCCAGTCACTTCTGTCTTCCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTACGGCGAGGTCCGTGTaGTCATCGGGAAGCAGAATG +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIATARSV*SSGSRM
Trigger: CATTCTGCTTCCCGATGACAACACGGACCTCGCCGT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp CACCTCCCAAAGGTCCCACCTCTTAATACTGATACATTGGATGTTGGGTTTCAAGCACTTCCACAGTGCTaGTCTTTTATGACATTGCCT +
Preference number: 5 (lower is better)
Translates to: HLPKVPPLNTDTLDVGFQALPQC*SFMTLP
Trigger: AGGCAATGTCATAAAAGACAAGCACTGTGGAAGTGC...TTGAAACCCAACATCCAATGTATCAGTATTAAGAGGTGGGACCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGGTCCCACCTCTTAATACTGATACATTGGATGTTGGGTTTCAACCTACTTTGGTAGAGTaGTGGTGGTATTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: HLPKVPPLNTDTLDVGFQPTLVE*WWYFTV
Trigger: CACAGTGAAATACCACCACAACTCTACCAAAGTAGG...TTGAAACCCAACATCCAATGTATCAGTATTAAGAGGTGGGACCTTTGGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTTCACAAGGACCAGCTTaGTCAGGGGATCGACTGTCC +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIASQGPA*SGDRLS
Trigger: GGACAGTCGATCCCCTGACAAAGCTGGTCCTTGTGA...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAACCAGAAAAGTCTGCCTaGGCTTCGTCAAAAGCATCG +
Preference number: 5 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQPEKSA*ASSKAS
Trigger: CGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTGG...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTACCTCCACGAAGCACTaGTGGGCAACCTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIATSTKH*WATLDR
Trigger: TCTGTCCAAGGTTGCCCACAAGTGCTTCGTGGAGGT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGGGTATGTACAGCAATaGCTCCTCTTTACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIGYVQQ*LLFTEK
Trigger: CTTCTCCGTAAAGAGGAGCAATTGCTGTACATACCC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGCTTCTGAGTCTAATGAGGAGAAGAATACGTTTCTaGAGTTGTCCTCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: FDKRQRAWLRTLLLSLMRRRIRF*SCPLPP
Trigger: TGGGGGAAGAGGACAACTCAAGAAACGTATTCTTCT...CCTCATTAGACTCAGAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTGCTGAGTCCCTGAACTaGTATCTCAGGCTTATGGAA +
Preference number: 5 (lower is better)
Translates to: LYFGIQATAPTRSQGMLIAESLN*YLRLME
Trigger: TTCCATAAGCCTGAGATACAAGTTCAGGGACTCAGC...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp ACACGCTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTGCTGTGTGTTGGAATaGTGGGTGACTTCAATTTTT +
Preference number: 5 (lower is better)
Translates to: TRFILAFKPLHQLGHRECCCVLE*WVTSIF
Trigger: AAAAATTGAAGTCACCCACAATTCCAACACACAGCA...ACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAGCGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCATTGCCCAAACCTGCTTaGGAAAACATGATCCCTAAA +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKALPKPA*ENMIPK
Trigger: TTTAGGGATCATGTTTTCCAAAGCAGGTTTGGGCAA...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp ACATCCTCCTGTGGCACTTCCACAGTGCTTGTCTTTTATGACATTGCCTCTTTTAGGACATGCTTAACTTaGCTTAGTGCAACGTTTGCT +
Preference number: 5 (lower is better)
Translates to: TSSCGTSTVLVFYDIASFRTCLT*LSATFA
Trigger: AGCAAACGTTGCACTAAGCAAAGTTAAGCATGTCCT...AAAAGAGGCAATGTCATAAAAGACAAGCACTGTGGAAGTGCCACAGGAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp GAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGGGAGAAGAATACGTTTCTaGAGTTGTCCTCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: EGCISLLTAVIAVCWNCGRRIRF*SCPLPP
Trigger: TGGGGGAAGAGGACAACTCAAGAAACGTATTCTTCT...CCCACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000397985.7
CDS-3UTR CAA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAGGACTCAGTGGTGTGTaGCGTAAGTTCCTTTGGTAT +
Preference number: 5 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKGLSGV*RKFLWY
Trigger: ATACCAAAGGAACTTACGCAACACACCACTGAGTCC...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp CTTTATTTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAGTGATTGCTGTGTGTaGGAATTGTGGGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: LYFGIQATAPTRSQGMLISDCCV*ELWVTS
Trigger: TGAAGTCACCCACAATTCCAACACACAGCAATCACT...AATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TATTTATTCAGGTGTTTTGTGGGACCCAAAGAAGCTCGCAGGTTGCAATTAGTTTGTCACAGAAGAAGCTaGTGCTTCTCAGTGTATCCA +
Preference number: 5 (lower is better)
Translates to: YLFRCFVGPKEARRLQLVCHRRS*CFSVYP
Trigger: TGGATACACTGAGAAGCACAAGCTTCTTCTGTGACA...AACTAATTGCAACCTGCGAGCTTCTTTGGGTCCCACAAAACACCTGAATAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp AGCAAGAATGAAGAAGTAACAGCCTTTTTCCAGGAGAGAAATGATGAGGACTTGCAGGTGCTGATAATGTaGGCAAGAATGTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: SKNEEVTAFFQERNDEDLQVLIM*ARMSQK
Trigger: CTTCTGTGACATTCTTGCCAACATTATCAGCACCTG...CAAGTCCTCATCATTTCTCTCCTGGAAAAAGGCTGTTACTTCTTCATTCTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp TTTATGAGGACATCAATCCCATTTATGAGGGCTTTTTCCTCAGGACCTAATCACCATCGTTGCCCACTCTaGATGTTGTCAGTGGTTTTA +
Preference number: 5 (lower is better)
Translates to: FMRTSIPFMRAFSSGPNHHRCPL*MLSVVL
Trigger: TAAAACCACTGACAACATCAAGAGTGGGCAACGATG...GTGATTAGGTCCTGAGGAAAAAGCCCTCATAAATGGGATTGATGTCCTCATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTCCAGAAAAGTCTGCCTaGGCTTCGTCAAAAGCATCG +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIAPEKSA*ASSKAS
Trigger: CGATGCTTTTGACGAAGCCAAGGCAGACTTTTCTGG...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp ATGAGGTTGATACGGGAGTTCATGGGCCATCAAATCACACTGTCACTTATCTTTAATACGTTTCTTGAGTaGTCCTCTTCCCCCAATATT +
Preference number: 5 (lower is better)
Translates to: MRLIREFMGHQITLSLIFNTFLE*SSSPNI
Trigger: AATATTGGGGGAAGAGGACAACTCAAGAAACGTATT...AAAGATAAGTGACAGTGTGATTTGATGGCCCATGAACTCCCGTATCAACCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS-3UTR CAA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTAGAAGAATACGTTTCTaGAGTTGTCCTCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: REGCISLLTAVIAVCWNCRRIRF*SCPLPP
Trigger: TGGGGGAAGAGGACAACTCAAGAAACGTATTCTTCT...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000397985.7
CDS-3UTR CAA 90 bp TTTGGCATTCAAGCCACTGCACCAACTAGGTCACAGGGAATGTTAATTAAGGCAAGTTCCTTTGGTATTTaGTGTGTTTCAGAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: FGIQATAPTRSQGMLIKASSFGI*CVSEGK
Trigger: TTTTCCCTCTGAAACACACAAAATACCAAAGGAACT...TGCCTTAATTAACATTCCCTGTGACCTAGTTGGTGCAGTGGCTTGAATGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAAAGTGATTGCTGTGTGTaGGAATTGTGGGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKSDCCV*ELWVTS
Trigger: TGAAGTCACCCACAATTCCAACACACAGCAATCACT...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTTGCCCAAACCTGCTTaGGAAAACATGATCCCTAAA +
Preference number: 5 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWLPKPA*ENMIPK
Trigger: TTTAGGGATCATGTTTTCCAAAGCAGGTTTGGGCAA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TATAGAAATCCAGCCACACAGTGGAATACTATGCACATCAAATTGATGACCTGGTCCTGTGGATTAATTTaGCCCAAACCTGCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: YRNPATQWNTMHIKLMTWSCGLI*PKPALE
Trigger: TTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGA...CCAGGTCATCAATTTGATGTGCATAGTATTCCACTGTGTGGCTGGATTTCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTTGACAAAAGACAAAGAGCATGGCTCAGAACTCTGCTTCTGAGTCTAATGAGGAGTGGGAGAGATTGTTaGACAAAAGACAAAGAGCAT +
Preference number: 5 (lower is better)
Translates to: FDKRQRAWLRTLLLSLMRSGRDC*TKDKEH
Trigger: ATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACT...CCTCATTAGACTCAGAAGCAGAGTTCTGAGCCATGCTCTTTGTCTTTTGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp ATACATACTACTGTGAGTGGGAGAGATTGTTTGACAAAAGACAAAGAGCATGGCAATACGTTTCTTGAGTaGTCCTCTTCCCCCAATATT +
Preference number: 5 (lower is better)
Translates to: IHTTVSGRDCLTKDKEHGNTFLE*SSSPNI
Trigger: AATATTGGGGGAAGAGGACAACTCAAGAAACGTATT...GCCATGCTCTTTGTCTTTTGTCAAACAATCTCTCCCACTCACAGTAGTATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397988.7
CDS-3UTR CAA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTGCTGTAGTTTCCAAATaGCTGCCACAACGCAATTTT +
Preference number: 5 (lower is better)
Translates to: REGCISLLTAVIAVCWNCAVVSK*LPQRNF
Trigger: AAAATTGCGTTGTGGCAGCAATTTGGAAACTACAGC...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp GATGTATACCTTTCAGTCCTGTGGATTAATTTTGCCCAAACCTGCTTTGGAAAATCCTGTGGATTAATTTaGCCCAAACCTGCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: DVYLSVLWINFAQTCFGKSCGLI*PKPALE
Trigger: TTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGA...TTTTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGACTGAAAGGTATACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAATCCTGTGGATTAATTTaGCCCAAACCTGCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQSCGLI*PKPALE
Trigger: TTCCAAAGCAGGTTTGGGCAAAATTAATCCACAGGA...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTAGTGATTGCTGTGTGTaGGAATTGTGGGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIASDCCV*ELWVTS
Trigger: TGAAGTCACCCACAATTCCAACACACAGCAATCACT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AATTTTAGAGGCTGGGAAGTCCAAAATCAAAGTACCATTATATTTGATGTCTGGCAGGTGCTGATAATGTaGGCAAGAATGTCACAGAAG +
Preference number: 5 (lower is better)
Translates to: NFRGWEVQNQSTIIFDVWQVLIM*ARMSQK
Trigger: CTTCTGTGACATTCTTGCCAACATTATCAGCACCTG...CCAGACATCAAATATAATGGTACTTTGATTTTGGACTTCCCAGCCTCTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp AGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTGTGTGTTGGAATTGTACTATGCACATCAAATaGATGACCTGGAAAGATCTT +
Preference number: 5 (lower is better)
Translates to: REGCISLLTAVIAVCWNCTMHIK*MTWKDL
Trigger: AAGATCTTTCCAGGTCATCAATTTGATGTGCATAGT...ACAATTCCAACACACAGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp AACCAGTGTAACTTTCTAGGGACCAATTTGGAAGAAGTCTCAAAATGTGCTCAAACTATGCACATCAAATaGATGACCTGGAAAGATCTT +
Preference number: 5 (lower is better)
Translates to: NQCNFLGTNLEEVSKCAQTMHIK*MTWKDL
Trigger: AAGATCTTTCCAGGTCATCAATTTGATGTGCATAGT...TTGAGCACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAAGTTACACTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTTACCTACTTTGGTAGAGTTGTGGTGGTATTTCACTGTGCATTTCATATGAATATTTATTCAGGTGTTTaGTGGGACCCAAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: FTYFGRVVVVFHCAFHMNIYSGV*WDPKKL
Trigger: GAGCTTCTTTGGGTCCCACAAAACACCTGAATAAAT...ATTCATATGAAATGCACAGTGAAATACCACCACAACTCTACCAAAGTAGGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTAATACGTTTCTTGAGTaGTCCTCTTCCCCCAATATT +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIANTFLE*SSSPNI
Trigger: AATATTGGGGGAAGAGGACAACTCAAGAAACGTATT...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000397985.7
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTTGCTGTGTGTTGGAATaGTGGGTGACTTCAATTTTT +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIACCVLE*WVTSIF
Trigger: AAAAATTGAAGTCACCCACAATTCCAACACACAGCA...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTGCATACACATAATAGGGAAGGATGTATATCACTATTAACAGCAGTGATTGCTTTTCTAGGGACCAATTaGGAAGAAGTCTCAAAATGT +
Preference number: 5 (lower is better)
Translates to: LHTHNREGCISLLTAVIAFLGTN*EEVSKC
Trigger: ACATTTTGAGACTTCTTCCAAATTGGTCCCTAGAAA...AGCAATCACTGCTGTTAATAGTGATATACATCCTTCCCTATTATGTGTATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS-3UTR CAA 90 bp TTATTTGGTAGAATATCCCTCAATTCAATGCCGTCTGATGTTTCTGTACTTACATGCCCACTCTTGATGTaGTCAGTGGTTTTAATTTTA +
Preference number: 5 (lower is better)
Translates to: LFGRISLNSMPSDVSVLTCPLLM*SVVLIL
Trigger: TAAAATTAAAACCACTGACAACATCAAGAGTGGGCA...TGTAAGTACAGAAACATCAGACGGCATTGAATTGAGGGATATTCTACCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS TCA 72 bp CTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCTGCTTTaGCTATTCCTCCTTTGTAGATGCTTCACGTCCGCC +
Preference number: 6 (lower is better)
Translates to: LLLPPPPPPLLL*LFLLCRCFTSA
Trigger: GGCGGACGTGAAGCATCTACAAAGGAGGAATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
CDS GCA 72 bp CATCCATCAGAGAAGGTCTCCTGCTGCTGCTGCTGCTaGCGCCGCCGCCGCCGCCGCTGCTGCTTTGACTAT +
Preference number: 6 (lower is better)
Translates to: HPSEKVSCCCCC*RRRRRRCCFDY
Trigger: ATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGACCTTCTCTGATGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397985.7
ENST00000636430.1
CDS GCA 72 bp TTGTATAAACAAAGTGCCTCCTGCTGCTGCTGCTGCTaGCGCCGCCGCCGCCGCCGCTGCTGCTTTGACTAT +
Preference number: 6 (lower is better)
Translates to: LYKQSASCCCCC*RRRRRRCCFDY
Trigger: ATAGTCAAAGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGGAGGCACTTTGTTTATACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542677.5
CDS TCA 72 bp CCACGGCGAGGTCCGTGTTGTCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTTCCACATAGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: PRRGPCCHREAE*PCSAPLPHRAA
Trigger: AGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATGACAACACGGACCTCGCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5
ENST00000636430.1
CDS CCA 72 bp CATTTGCTTCACAGAGGTCATCCATCAGAGAAGGTCTaGCAGAGGCCCCCACCTCCTGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: HLLHRGHPSEKV*QRPPPPAAAAA
Trigger: AGCAGCAGCAGCAGCAGGAGGTGGGGGCCTCTGCCAGACCTTCTCTGATGGATGACCTCTGTGAAGCAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353706.6
CDS TCA 72 bp TCACGGCGAGGTCCGTGTTGTCATCGGGAAGCAGAATaGCCATGCTCAGCTCCTCTTCCACATAGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: SRRGPCCHREAE*PCSAPLPHRAA
Trigger: AGCTGCCCTATGTGGAAGAGGAGCTGAGCATGGTCATTCTGCTTCCCGATGACAACACGGACCTCGCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295211.5
ENST00000397988.7
CDS TCA 72 bp GACTATTCCTCCTTTGTAGATGCTTCACGTCCGCCTTaGTTGAGGGCAAGGCTTCCGGCAGATGACTCAGAA +
Preference number: 6 (lower is better)
Translates to: DYSSFVDASRPP*LRARLPADDSE
Trigger: TTCTGAGTCATCTGCCGGAAGCCTTGCCCTCAATCAAGGCGGACGTGAAGCATCTACAAAGGAGGAATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353706.6
ENST00000542677.5
CDS GCA 72 bp TTACCTTCAGTCTTCTCTGCCACCCAGTCATTTATATaGTTCCTGCACTCTTCAGTGTCTTCAGCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: LPSVFSATQSFI*FLHSSVSSAKD
Trigger: GTCCTTTGCTGAAGACACTGAAGAGTGCAGGAAGCATATAAATGACTGGGTGGCAGAGAAGACTGAAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295211.5
ENST00000353706.6
ENST00000397985.7
ENST00000397988.7
ENST00000441827.5
ENST00000542677.5
ENST00000636430.1
CDS CCA 72 bp CCCTTGATCTTCACCCAGCTGGTGTTTGATCATAAATaGAGGTTAGAATCCTTAGAAACTCAGGTGCTGATA +
Preference number: 6 (lower is better)
Translates to: PLIFTQLVFDHK*RLESLETQVLI
Trigger: TATCAGCACCTGAGTTTCTAAGGATTCTAACCTCCATTTATGATCAAACACCAGCTGGGTGAAGATCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS CAA 72 bp AGGTTAGAATCCTTAGAAACTCAGGTGCTGATAATGTaGGCAAGAATGTCACAGAAGAAGCTTGTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: RLESLETQVLIM*ARMSQKKLVLL
Trigger: GAGAAGCACAAGCTTCTTCTGTGACATTCTTGCCAACATTATCAGCACCTGAGTTTCTAAGGATTCTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS CAA 90 bp CATAAATGGAGGTTAGAATCCTTAGAAACTCAGGTGCTGATAATGTaGGCAAGAATGTCACAGAAGAAGCTTGTGCTTCTCAGTGTATCC +
Preference number: 6 (lower is better)
Translates to: HKWRLESLETQVLIM*ARMSQKKLVLLSVS
Trigger: GGATACACTGAGAAGCACAAGCTTCTTCTGTGACATTCTTGCCAACATTATCAGCACCTGAGTTTCTAAGGATTCTAACCTCCATTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636430.1
CDS GCA 72 bp TCAGCCAATTATTTGGTAGAATATCCCTCAATTCAATaGCGTCTGATGTTTCTGTACTTACACTCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SANYLVEYPSIQ*RLMFLYLHSGA
Trigger: AGCACCTGAGTGTAAGTACAGAAACATCAGACGGCATTGAATTGAGGGATATTCTACCAAATAATTGGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493661.2
CDS CCA 72 bp AAGGCTCCAAGTCATAACTCTCCTCCAGCTTTAATCTaGGAAGGAAAACTTGAACCTTACTTTTTGTCAACT +
Preference number: 6 (lower is better)
Translates to: KAPSHNSPPALI*EGKLEPYFLST
Trigger: AGTTGACAAAAAGTAAGGTTCAAGTTTTCCTTCCCAGATTAAAGCTGGAGGAGAGTTATGACTTGGAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353706.6
ENST00000397985.7
ENST00000542677.5