RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINB13 (Homo sapiens)

Ensembl gene IDs: ENSG00000197641

Ensembl transcript IDs: ENST00000269489.9, ENST00000344731.10, ENST00000415733.1, ENST00000431153.5, ENST00000438844.1, ENST00000479842.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCGGAGCCTGACGACATTCCCGAGTAGTCGGCTTTGTGCTCACTaGAGGCATCGCCCATCCCCATGGCAGCCAGGACCGCCTCTAGAT +
Preference number: 1 (lower is better)
Translates to: TRSLTTFPSSRLCAH*RHRPSPWQPGPPLD
Trigger: ATCTAGAGGCGGTCCTGGCTGCCATGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR TCA 90 bp CACAAAGGAACTGTGCAGGAACTTCTGGGCGTACAACCCGGAGCCTaGCGACATTCCCGAGTAGTCGGCTTTGTGCTCACTGAAGGCATC +
Preference number: 1 (lower is better)
Translates to: HKGTVQELLGVQPGA*RHSRVVGFVLTEGI
Trigger: GATGCCTTCAGTGAGCACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGTTCCTGCACAGTTCCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CCA 90 bp GATGAAGAACAGGAAGGGATGATTGCAGTGAACATTTTCATGACCTaGGGCGGATGTGACAGTAAAGCCTATGCCGGTGGCAGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: DEEQEGMIAVNIFMT*GGCDSKAYAGGSCS
Trigger: GCTGCAGCTGCCACCGGCATAGGCTTTACTGTCACATCCGCCCCAGGTCATGAAAATGTTCACTGCAATCATCCCTTCCTGTTCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR TCA 90 bp AGGTGCTTCCAACTCTTCCCTGTTTTAGCTAGTCCTCAATTTGTCTaGTGTCTGAACCCCACTGCCAGAGTTGAGTCTTGCCTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: RCFQLFPVLASPQFV*CLNPTARVESCLLS
Trigger: ACTCAGCAGGCAAGACTCAACTCTGGCAGTGGGGTTCAGACATCAGACAAATTGAGGACTAGCTAAAACAGGGAAGAGTTGGAAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR GCA 90 bp TTATCTTCTCCAGGCCATCGATGTCGTTGGGCAGAAGCACAAACATaGTTAGGTCGTTGTTTTTATATGGAATCCCTAGAATTTTGGCCT +
Preference number: 1 (lower is better)
Translates to: LSSPGHRCRWAEAQT*LGRCFYMESLEFWP
Trigger: AGGCCAAAATTCTAGGGATTCCATATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATGGCCTGGAGAAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CCA 90 bp CAGGACTTATTTTATCTATTATCTTCTCCAGGCCATCGATGTCGTTaGGCAGAAGCACAAACATGCTTAGGTCGTTGTTTTTATATGGAA +
Preference number: 1 (lower is better)
Translates to: QDLFYLLSSPGHRCR*AEAQTCLGRCFYME
Trigger: TTCCATATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATGGCCTGGAGAAGATAATAGATAAAATAAGTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CCA 90 bp CAATTTACTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTaGTTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCA +
Preference number: 1 (lower is better)
Translates to: QFTFKGNQREIINEV*FDSPYAWHKEKDIS
Trigger: TGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAGTAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR GCA 90 bp TCAATACATACTACAACAGATGAACCTCAAGAACACCATGCTAAGTaGAAGACGCCAGACACAAAATACTACATGTATTATGATTCCATT +
Preference number: 1 (lower is better)
Translates to: SIHTTTDEPQEHHAK*KTPDTKYYMYYDSI
Trigger: AATGGAATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTGTTGTAGTATGTATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CCA 90 bp ACTTCTGGGCGTACAACCCGGAGCCTGACGACATTCCCGAGTAGTCGGCTTTGTCATCGCCCATCCCCATaGCAGCCAGGACCGCCTCTA +
Preference number: 2 (lower is better)
Translates to: TSGRTTRSLTTFPSSRLCHRPSP*QPGPPL
Trigger: TAGAGGCGGTCCTGGCTGCCATGGGGATGGGCGATG...ACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR GCA 90 bp CAGCCAGGACCGCCTCTAGATCGTAACCGTCCTCCACCTCAAACCGGGGCAAGTCCTAGAATTTTGGCCTaGAAGTCCTCCAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: QPGPPLDRNRPPPQTGASPRILA*KSSRKV
Trigger: CACTTTCCTGGAGGACTTGCAGGCCAAAATTCTAGG...ACTTGCCCCGGTTTGAGGTGGAGGACGGTTACGATCTAGAGGCGGTCCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR TCA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATGGCACACTCCCCACTGCCAGAGTTaGGTCTTGCCTGCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: SSITSGCSHGKGKLIWHTPHCQS*VLPAES
Trigger: TGACTCAGCAGGCAAGACTCAACTCTGGCAGTGGGG...AGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR-3UTR CCA 90 bp ACTTCTGGGCGTACAACCCGGAGCCTGACGACATTCCCGAGTAGTCGGCTTTGTGTGAAGCTAAAGGAATaGCTCTGTGTCATCATCTGT +
Preference number: 2 (lower is better)
Translates to: TSGRTTRSLTTFPSSRLCVKLKE*LCVIIC
Trigger: ACAGATGATGACACAGAGCCATTCCTTTAGCTTCAC...ACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR TCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAGTACAACCCGGAGCCTaGCGACATTCCCGAGTAGTC +
Preference number: 2 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSVQPGA*RHSRVV
Trigger: GACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTAC...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR TCA 90 bp ACCATGTTCACCAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACTTGCCTCTTATCAGCTaGGGAATCTTGGGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: TMFTSTSLVELLIEPSGNLPLIS*GILGKL
Trigger: TAACTTGCCCAAGATTCCTCAGCTGATAAGAGGCAA...GTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAACATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CAA 90 bp AGGCCATCGATGTCGTTGGGCAGAAGCACAAACATGCTTAGGTCGTaGTTTTTATATGGAATCCCTAGAATTTTGGCCTGCAAGTCCTCC +
Preference number: 2 (lower is better)
Translates to: RPSMSLGRSTNMLRS*FLYGIPRILACKSS
Trigger: GGAGGACTTGCAGGCCAAAATTCTAGGGATTCCATATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR TCA 90 bp CCCTGCATCTCCCCAATCCCTGATAGTTACCATTTTATTCTCTTTCTCTATGTAAGTCCTCAATTTGTCTaGTGTCTGAACCCCACTGCC +
Preference number: 2 (lower is better)
Translates to: PCISPIPDSYHFILFLYVSPQFV*CLNPTA
Trigger: GGCAGTGGGGTTCAGACATCAGACAAATTGAGGACT...TACATAGAGAAAGAGAATAAAATGGTAACTATCAGGGATTGGGGAGATGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR-3UTR GCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAGAACACCATGCTAAGTaGAAGACGCCAGACACAAAA +
Preference number: 2 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSEHHAK*KTPDTK
Trigger: TTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTC...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR GCA 90 bp ATATATCCGTCATCTCACATAGTTATCCTTTTTGTATGTGTGGCAAGAGCACCTTTTTCTCCCTCTCCCTaGATCTCCCCAATCCCTGAT +
Preference number: 2 (lower is better)
Translates to: IYPSSHIVILFVCVARAPFSPSP*ISPIPD
Trigger: ATCAGGGATTGGGGAGATGCAGGGAGAGGGAGAAAA...AGGTGCTCTTGCCACACATACAAAAAGGATAACTATGTGAGATGACGGATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR-3UTR CCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTTCTTCCATATGCCCTaGACTAGTCCACTCTACCAA +
Preference number: 2 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTFFHMP*TSPLYQ
Trigger: TTGGTAGAGTGGACTAGTCCAGGGCATATGGAAGAA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CAA 90 bp ACAAACATGCTTAGGTCGTTGTTTTTATATGGAATCCCTAGAATTTaGGCCTGCAAGTCCTCCAGGAAAGTGAAGCTAAAGGAATGGCTC +
Preference number: 2 (lower is better)
Translates to: TNMLRSLFLYGIPRI*ACKSSRKVKLKEWL
Trigger: GAGCCATTCCTTTAGCTTCACTTTCCTGGAGGACTTGCAGGCCAAAATTCTAGGGATTCCATATAAAAACAACGACCTAAGCATGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR GCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTGGGAGGTTCTCATTTTaGCCATCGCCTATTTATCCC +
Preference number: 2 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLGRFSF*PSPIYP
Trigger: GGGATAAATAGGCGATGGGCAAAATGAGAACCTCCC...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR GCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTGAACACCATGCTAAGTaGAAGACGCCAGACACAAAA +
Preference number: 2 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLEHHAK*KTPDTK
Trigger: TTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTC...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR TCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCATCTCTTTCCTATGTGTaGTTTGCCACAATATCTGTT +
Preference number: 2 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSSLSYV*FATISV
Trigger: AACAGATATTGTGGCAAATCACACATAGGAAAGAGA...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR GCA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGAATAGGTCTTTTCCATaGAATGGAATAGTATTCGGC +
Preference number: 2 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGNRSFP*NGIVFG
Trigger: GCCGAATACTATTCCATTGCATGGAAAAGACCTATT...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
3UTR-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTCAGAAAACAACTCAGTaGTGCCTAGGATTGGGAATA +
Preference number: 2 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLQKTTQ*CLGLGI
Trigger: TATTCCCAATCCTAGGCACCACTGAGTTGTTTTCTG...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR GCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCTCTCCTTTCGTGTaGACAAAACTACAAGATACC +
Preference number: 2 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLFSPFV*TKLQDT
Trigger: GGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAA...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR GCA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCAATAGGTCTTTTCCATaGAATGGAATAGTATTCGGC +
Preference number: 2 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSNRSFP*NGIVFG
Trigger: GCCGAATACTATTCCATTGCATGGAAAAGACCTATT...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CCA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAGGCATCCTCTCCATCTaGTATATTGTTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTGILSI*YIVLFC
Trigger: ACAAAATAAAACAATATACCAGATGGAGAGGATGCC...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTAACATTTTCATGACCTaGGGCGGATGTGACAGTAAA +
Preference number: 2 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLNIFMT*GGCDSK
Trigger: TTTACTGTCACATCCGCCCCAGGTCATGAAAATGTT...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CAA 90 bp TTACTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTaGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTT +
Preference number: 2 (lower is better)
Translates to: LLSKETKGRLSMRFG*THLTHGTKKRTFHF
Trigger: AAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR TCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTCTCTTTCCTATGTGTaGTTTGCCACAATATCTGTT +
Preference number: 2 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLSLSYV*FATISV
Trigger: AACAGATATTGTGGCAAATCACACATAGGAAAGAGA...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR TCA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCACGTTGGAAAACAGTTTaGCTGTTTCTTACAAAGCTA +
Preference number: 2 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHARWKTV*LFLTKL
Trigger: TAGCTTTGTAAGAAACAGTCAAACTGTTTTCCAACG...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
3UTR-3UTR GCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTTTCTCTCCTTTCGTGTaGACAAAACTACAAGATACC +
Preference number: 2 (lower is better)
Translates to: NTMLSARRQTQNTTCIMIFSPFV*TKLQDT
Trigger: GGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAA...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR GCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTTTCTCTCCTTTCGTGTaGACAAAACTACAAGATACC +
Preference number: 2 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLFSPFV*TKLQDT
Trigger: GGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAA...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTGTTCGTACTCTTTACTaGAGAGACTTTCTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: NTMLSARRQTQNTTCIMIVRTLY*RDFLSF
Trigger: AAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR TCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTTCTCTTTCCTATGTGTaGTTTGCCACAATATCTGTT +
Preference number: 2 (lower is better)
Translates to: NTMLSARRQTQNTTCIMISLSYV*FATISV
Trigger: AACAGATATTGTGGCAAATCACACATAGGAAAGAGA...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR TCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTTACAAAGCTAACTATTaGTTTTTCATATGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: NTMLSARRQTQNTTCIMIYKANY*FFIWPS
Trigger: GCTGGGCCATATGAAAAATCAATAGTTAGCTTTGTA...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
3UTR-3UTR CCA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATGGCATCCTCTCCATCTaGTATATTGTTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNGILSI*YIVLFC
Trigger: ACAAAATAAAACAATATACCAGATGGAGAGGATGCC...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CCA 90 bp CTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTGGCATCCTCTCCATCTaGTATATTGTTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: LSKETKGRLSMRFGLTHLGILSI*YIVLFC
Trigger: ACAAAATAAAACAATATACCAGATGGAGAGGATGCC...AAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR TCA 72 bp CTGACGACATTCCCGAGTAGTCGGCTTTGTGCTCACTaGAGGCATCGCCCATCCCCATGGCAGCCAGGACCG +
Preference number: 3 (lower is better)
Translates to: LTTFPSSRLCAH*RHRPSPWQPGP
Trigger: CGGTCCTGGCTGCCATGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCCGACTACTCGGGAATGTCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR TCA 72 bp ACTGTGCAGGAACTTCTGGGCGTACAACCCGGAGCCTaGCGACATTCCCGAGTAGTCGGCTTTGTGCTCACT +
Preference number: 3 (lower is better)
Translates to: TVQELLGVQPGA*RHSRVVGFVLT
Trigger: AGTGAGCACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGTTCCTGCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR GCA 72 bp TCGGTGCCTTCCTCAGTTACTGCCACAAAGGAACTGTaGAGGAACTTCTGGGCGTACAACCCGGAGCCTGAC +
Preference number: 3 (lower is better)
Translates to: SVPSSVTATKEL*RNFWAYNPEPD
Trigger: GTCAGGCTCCGGGTTGTACGCCCAGAAGTTCCTGCACAGTTCCTTTGTGGCAGTAACTGAGGAAGGCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR CAA 90 bp GGCTTTGTGCTCACTGAAGGCATCGCCCATCCCCATGGCAGCCAGGACCGCCTCTTTCCTATGTGTGATTaGCCACAATATCTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: GFVLTEGIAHPHGSQDRLFPMCD*PQYLLG
Trigger: CCCCAACAGATATTGTGGCAAATCACACATAGGAAA...GAGGCGGTCCTGGCTGCCATGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CCA 72 bp TCAGTTACTGCCACAAAGGAACTGTGCAGGAACTTCTaGGCGTACAACCCGGAGCCTGACGACATTCCCGAG +
Preference number: 3 (lower is better)
Translates to: SVTATKELCRNF*AYNPEPDDIPE
Trigger: CTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGTTCCTGCACAGTTCCTTTGTGGCAGTAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CCA 72 bp ACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATaGCACACTGGTGGGCATGTCTTCTGGAGAGGTGCT +
Preference number: 3 (lower is better)
Translates to: TSGCSHGKGKLI*HTGGHVFWRGA
Trigger: AGCACCTCTCCAGAAGACATGCCCACCAGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR CCA 72 bp CAGGAAGGGATGATTGCAGTGAACATTTTCATGACCTaGGGCGGATGTGACAGTAAAGCCTATGCCGGTGGC +
Preference number: 3 (lower is better)
Translates to: QEGMIAVNIFMT*GGCDSKAYAGG
Trigger: GCCACCGGCATAGGCTTTACTGTCACATCCGCCCCAGGTCATGAAAATGTTCACTGCAATCATCCCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR TCA 72 bp TCAATTTGTCTGATGTCTGAACCCCACTGCCAGAGTTaGGTCTTGCCTGCTGAGTCATGTCCAGACTCCTAC +
Preference number: 3 (lower is better)
Translates to: SICLMSEPHCQS*VLPAESCPDSY
Trigger: GTAGGAGTCTGGACATGACTCAGCAGGCAAGACTCAACTCTGGCAGTGGGGTTCAGACATCAGACAAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR GCA 72 bp GATATGGCACACTGGTGGGCATGTCTTCTGGAGAGGTaGTTCCAACTCTTCCCTGTTTTAGCTAGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: DMAHWWACLLER*FQLFPVLASPQ
Trigger: TTGAGGACTAGCTAAAACAGGGAAGAGTTGGAAGCACCTCTCCAGAAGACATGCCCACCAGTGTGCCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR-3UTR CAA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTTGCTGACAAAGGGTTaGCTGGCAGAATCGACGGGG +
Preference number: 3 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTLLTKG*LAESTG
Trigger: CCCCGTCGATTCTGCCAGCAAACCCTTTGTCAGCAA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR CAA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGGCCATCGATGTCGTaGGGCAGAAGCACAAACATG +
Preference number: 3 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTRPSMS*GRSTNM
Trigger: CATGTTTGTGCTTCTGCCCAACGACATCGATGGCCT...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR TCA 72 bp CAACTCTTCCCTGTTTTAGCTAGTCCTCAATTTGTCTaGTGTCTGAACCCCACTGCCAGAGTTGAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: QLFPVLASPQFV*CLNPTARVESC
Trigger: GCAAGACTCAACTCTGGCAGTGGGGTTCAGACATCAGACAAATTGAGGACTAGCTAAAACAGGGAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415733.1
3UTR-3UTR CAA 90 bp ACCATGTTCACCAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCA +
Preference number: 3 (lower is better)
Translates to: TMFTSTSLVELLIEPSGNTGSCF*LKAAMP
Trigger: TGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGT...GTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAACATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR GCA 72 bp CCAGGCCATCGATGTCGTTGGGCAGAAGCACAAACATaGTTAGGTCGTTGTTTTTATATGGAATCCCTAGAA +
Preference number: 3 (lower is better)
Translates to: PGHRCRWAEAQT*LGRCFYMESLE
Trigger: TTCTAGGGATTCCATATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATGGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR CAA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCTCAATGAGGTTTGGTTaGACTCACCTTACGCATGGC +
Preference number: 3 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSSMRFG*THLTHG
Trigger: GCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGA...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTCAGTGGTGCCTAGGATaGGGAATATTAATAGACATG +
Preference number: 3 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTQWCLG*GILIDM
Trigger: CATGTCTATTAATATTCCCAATCCTAGGCACCACTG...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTGGGGAGGTTCTCATTTaGCCCATCGCCTATTTATCC +
Preference number: 3 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLGEVLI*PIAYLS
Trigger: GGATAAATAGGCGATGGGCAAAATGAGAACCTCCCC...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR CAA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACATTGCCACAATATCTGTaGGGGAATAGTAACATGAGC +
Preference number: 3 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTLPQYL*GNSNMS
Trigger: GCTCATGTTACTATTCCCCAACAGATATTGTGGCAA...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTTTCCTATGTGTGATTaGCCACAATATCTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTFPMCD*PQYLLG
Trigger: CCCCAACAGATATTGTGGCAAATCACACATAGGAAA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR CCA 72 bp TTTTATCTATTATCTTCTCCAGGCCATCGATGTCGTTaGGCAGAAGCACAAACATGCTTAGGTCGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: FYLLSSPGHRCR*AEAQTCLGRCF
Trigger: AAAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATGGCCTGGAGAAGATAATAGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR-3UTR CAA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCA +
Preference number: 3 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTTGSCF*LKAAMP
Trigger: TGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGT...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp CTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTTTTCCTATGTGTGATTaGCCACAATATCTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: LSKETKGRLSMRFGLTHLFPMCD*PQYLLG
Trigger: CCCCAACAGATATTGTGGCAAATCACACATAGGAAA...AAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGTCTCCATCTGGTATATaGTTTTATTTTGTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGSPSGI*FYFVLA
Trigger: TGCCAGGACAAAATAAAACAATATACCAGATGGAGA...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
3UTR GCA 72 bp ACTACAACAGATGAACCTCAAGAACACCATGCTAAGTaGAAGACGCCAGACACAAAATACTACATGTATTAT +
Preference number: 3 (lower is better)
Translates to: TTTDEPQEHHAK*KTPDTKYYMYY
Trigger: ATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTGTTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCA +
Preference number: 3 (lower is better)
Translates to: NTMLSARRQTQNTTCIMITGSCF*LKAAMP
Trigger: TGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGT...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR-3UTR CAA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTGATGTTGGTGAGGATTaGAAGACACTAGTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: NTMLSARRQTQNTTCIMIDVGED*KTLVLN
Trigger: GTTTAAAACTAGTGTCTTCAAATCCTCACCAACATC...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
3UTR-3UTR CAA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTAACATGCTTAGGTCGTaGTTTTTATATGGAATCCCT +
Preference number: 3 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLNMLRS*FLYGIP
Trigger: AGGGATTCCATATAAAAACAACGACCTAAGCATGTT...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp CAGCCAGGACCGCCTCTAGATCGTAACCGTCCTCCACCTCAAACCGGGGCAAGTAACACCTCCTCCAACTaGGAAGCGGTGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QPGPPLDRNRPPPQTGASNTSSN*EAVAPR
Trigger: CCGAGGAGCCACCGCTTCCCAGTTGGAGGAGGTGTT...ACTTGCCCCGGTTTGAGGTGGAGGACGGTTACGATCTAGAGGCGGTCCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR TCA 90 bp GGCTTTGTGCTCACTGAAGGCATCGCCCATCCCCATGGCAGCCAGGACCGCCTCTTGCCTCTTATCAGCTaGGGAATCTTGGGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GFVLTEGIAHPHGSQDRLLPLIS*GILGKL
Trigger: TAACTTGCCCAAGATTCCTCAGCTGATAAGAGGCAA...GAGGCGGTCCTGGCTGCCATGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATGGCACACTCCAACTGGGAAGCGGTaGCTCCTCGGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSITSGCSHGKGKLIWHTPTGKR*LLGSPG
Trigger: TCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGG...AGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp CTGAGGGCCTTGCTGACAAAGGGTTTGCTGGCAGAATCGACGGGGAGGTTCTCACCTAGAATTTTGGCCTaGAAGTCCTCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LRALLTKGLLAESTGRFSPRILA*KSSRKV
Trigger: CACTTTCCTGGAGGACTTGCAGGCCAAAATTCTAGG...TGAGAACCTCCCCGTCGATTCTGCCAGCAAACCCTTTGTCAGCAAGGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp GGCTTTGTGCTCACTGAAGGCATCGCCCATCCCCATGGCAGCCAGGACCGCCTCACTAATAGAGCCATCTaGGAACAAGTCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: GFVLTEGIAHPHGSQDRLTNRAI*EQVLDF
Trigger: AAAATCAAGGACTTGTTCCCAGATGGCTCTATTAGT...GAGGCGGTCCTGGCTGCCATGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCACCAACTGGGAAGCGGTaGCTCCTCGGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSPTGKR*LLGSPG
Trigger: TCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGG...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTCATCGCCCATCCCCATaGCAGCCAGGACCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTHRPSP*QPGPPL
Trigger: TAGAGGCGGTCCTGGCTGCCATGGGGATGGGCGATG...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACCCAAGTCGAGTGCTaGCGGCGCCAAGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTTQVEC*RRQVNP
Trigger: TGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGT...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGGTTATCGGCTTTGTGCTCACTaGAGGCATCGCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LTLRMAQRKGHFTFEDGYRLCAH*RHRPSP
Trigger: TGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCCG...ATAACCATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGCGGCTTTGTGCTCACTaGAGGCATCGCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMRLCAH*RHRPSP
Trigger: TGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCCG...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTGTACAACCCGGAGCCTaGCGACATTCCCGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTVQPGA*RHSRVV
Trigger: GACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTAC...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTCAGCTGCAGCCTCGGTaGCTTCCTCAGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTQLQPR*LPQLLP
Trigger: TGGCAGTAACTGAGGAAGGCACCGAGGCTGCAGCTG...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACCCAACTGGGAAGCGGTaGCTCCTCGGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FKGNQREIINEVWFDSPYPTGKR*LLGSPG
Trigger: TCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGG...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTCCAACTGGGAAGCGGTaGCTCCTCGGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLPTGKR*LLGSPG
Trigger: TCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGG...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAAACACCTCCTCCAACTaGGAAGCGGTGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSNTSSN*EAVAPR
Trigger: CCGAGGAGCCACCGCTTCCCAGTTGGAGGAGGTGTT...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATCATCGCCCATCCCCATaGCAGCCAGGACCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHHRPSP*QPGPPL
Trigger: TAGAGGCGGTCCTGGCTGCCATGGGGATGGGCGATG...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp ACTTCTGGGCGTACAACCCGGAGCCTGACGACATTCCCGAGTAGTCGGCTTTGTGTTCGTACTCTTTACTaGAGAGACTTTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TSGRTTRSLTTFPSSRLCVRTLY*RDFLSF
Trigger: AAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC...ACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR TCA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATCGGCTTTGTGCTCACTaGAGGCATCGCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHRLCAH*RHRPSP
Trigger: TGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCCG...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGGTACAACCCGGAGCCTaGCGACATTCCCGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGVQPGA*RHSRVV
Trigger: GACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTAC...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR TCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTGTACAACCCGGAGCCTaGCGACATTCCCGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTVQPGA*RHSRVV
Trigger: GACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTAC...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATGGCACACTGAGGACCATGCCAATTaGAGTCAAGATGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSITSGCSHGKGKLIWHTEDHAN*SQDAHR
Trigger: CCTGTGGGCATCTTGACTGCAATTGGCATGGTCCTC...AGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp ACCATGTTCACCAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACGGGAGGTTCTCATTTTaGCCATCGCCTATTTATCCC +
Preference number: 4 (lower is better)
Translates to: TMFTSTSLVELLIEPSGNGRFSF*PSPIYP
Trigger: GGGATAAATAGGCGATGGGCAAAATGAGAACCTCCC...GTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAACATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp GTCTTGTACGTTAGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGAAACACCTCCTCCAACTaGGAAGCGGTGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VLYVRALDSFILHIFNFGNTSSN*EAVAPR
Trigger: CCGAGGAGCCACCGCTTCCCAGTTGGAGGAGGTGTT...TCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCTAACGTACAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTCATCGCCCATCCCCATaGCAGCCAGGACCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLHRPSP*QPGPPL
Trigger: TAGAGGCGGTCCTGGCTGCCATGGGGATGGGCGATG...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCCAGCTGCAGCCTCGGTaGCTTCCTCAGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSQLQPR*LPQLLP
Trigger: TGGCAGTAACTGAGGAAGGCACCGAGGCTGCAGCTG...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp ACCATGTTCACCAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACGAACACCATGCTAAGTaGAAGACGCCAGACACAAAA +
Preference number: 4 (lower is better)
Translates to: TMFTSTSLVELLIEPSGNEHHAK*KTPDTK
Trigger: TTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTC...GTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAACATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTTGGAGAGACGGTGGTaGCTGGGCAACGAACTAGGA +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTLERRW*LGNELG
Trigger: TCCTAGTTCGTTGCCCAGCCACCACCGTCTCTCCAA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp CTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGGTTATTTGGAGAGACGGTGGTaGCTGGGCAACGAACTAGGA +
Preference number: 4 (lower is better)
Translates to: LTLRMAQRKGHFTFEDGYLERRW*LGNELG
Trigger: TCCTAGTTCGTTGCCCAGCCACCACCGTCTCTCCAA...ATAACCATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATAAACACCTCCTCCAACTaGGAAGCGGTGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKINTSSN*EAVAPR
Trigger: CCGAGGAGCCACCGCTTCCCAGTTGGAGGAGGTGTT...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp CTGAGGGCCTTGCTGACAAAGGGTTTGCTGGCAGAATCGACGGGGAGGTTCTCAGGCATCCTCTCCATCTaGTATATTGTTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: LRALLTKGLLAESTGRFSGILSI*YIVLFC
Trigger: ACAAAATAAAACAATATACCAGATGGAGAGGATGCC...TGAGAACCTCCCCGTCGATTCTGCCAGCAAACCCTTTGTCAGCAAGGCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR TCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATAACCCAAGTCGAGTGCTaGCGGCGCCAAGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKITQVEC*RRQVNP
Trigger: TGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGT...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp GGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGGCACAAAGAAAGCCACAAAGGAACTGTaGAGGAACTTCTGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: GRLSMRFGLTHLTHGTKKATKEL*RNFWAY
Trigger: GTACGCCCAGAAGTTCCTGCACAGTTCCTTTGTGGC...TTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTGCCACAAAGGAACTGTaGAGGAACTTCTGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTATKEL*RNFWAY
Trigger: GTACGCCCAGAAGTTCCTGCACAGTTCCTTTGTGGC...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTGCCTTCCTCAGTTACTaGCACAAAGGAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTAFLSY*HKGTVQ
Trigger: CTGCACAGTTCCTTTGTGGCAGTAACTGAGGAAGGC...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTGCTGACGGCGCCAAGTaGATCCATGATGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTADGAK*IHDDFS
Trigger: GCTAAAATCATCATGGATTCACTTGGCGCCGTCAGC...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGGCTGACGGCGCCAAGTaGATCCATGATGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMADGAK*IHDDFS
Trigger: GCTAAAATCATCATGGATTCACTTGGCGCCGTCAGC...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTGTCTCTTTTTCAGAGTaGAACACCTCCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTVSFSE*NTSSNW
Trigger: CCAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGAC...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTTTTTGGAGAGACGGTaGTGGCTGGGCAACGAACTA +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTFLERR*WLGNEL
Trigger: TAGTTCGTTGCCCAGCCACCACCGTCTCTCCAAAAA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTGAGACCTCGGGTTTTTaGAGAGACGGTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NTMLSARRQTQNTTCIMIETSGF*RDGGGW
Trigger: CCAGCCACCACCGTCTCTCCAAAAACCCGAGGTCTC...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp CAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACAAGTCCTTGATAACATTTTCATGACCTaGGGCGGATGTGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: QHQLGRATNRAIWEQVLDNIFMT*GGCDSK
Trigger: TTTACTGTCACATCCGCCCCAGGTCATGAAAATGTT...ATCAAGGACTTGTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CCA 90 bp AGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTGACCTAGATATGGCACACTGGTaGGCATGTCTTCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RALDSFILHIFNFGSFDLDMAHW*ACLLER
Trigger: CCTCTCCAGAAGACATGCCCACCAGTGTGCCATATC...TAGGTCAAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR TCA 90 bp GGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGGCACAAAGAAAGTCTCTTTTTCAGAGTaGAACACCTCCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: GRLSMRFGLTHLTHGTKKVSFSE*NTSSNW
Trigger: CCAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGAC...TTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAGTCTCTTTTTCAGAGTaGAACACCTCCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSVSFSE*NTSSNW
Trigger: CCAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGAC...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp ACCATGTTCACCAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACTCTCTTTCCTATGTGTaGTTTGCCACAATATCTGTT +
Preference number: 4 (lower is better)
Translates to: TMFTSTSLVELLIEPSGNSLSYV*FATISV
Trigger: AACAGATATTGTGGCAAATCACACATAGGAAAGAGA...GTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAACATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR TCA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATGGCACACTCCTACCTCAGAAGTATaGAGCATAACTGGTGTTACA +
Preference number: 4 (lower is better)
Translates to: SSITSGCSHGKGKLIWHTPTSEV*SITGVT
Trigger: TGTAACACCAGTTATGCTTCATACTTCTGAGGTAGG...AGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR TCA 90 bp AGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTGACCTAAGTCCTCAATTTGTCTaGTGTCTGAACCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RALDSFILHIFNFGSFDLSPQFV*CLNPTA
Trigger: GGCAGTGGGGTTCAGACATCAGACAAATTGAGGACT...TAGGTCAAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTGTTTTCCACCTTGCGTaGACCTTAAAATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTVFHLA*TLKSPW
Trigger: CCAAGGAGATTTTAAGGTGCACGCAAGGTGGAAAAC...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269489.9
CDS-3UTR GCA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGAGGACCATGCCAATTaGAGTCAAGATGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FKGNQREIINEVWFDSPYEDHAN*SQDAHR
Trigger: CCTGTGGGCATCTTGACTGCAATTGGCATGGTCCTC...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATGAGGACCATGCCAATTaGAGTCAAGATGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNEDHAN*SQDAHR
Trigger: CCTGTGGGCATCTTGACTGCAATTGGCATGGTCCTC...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCATCCCCAGGAGGACCATaGCAATTGCAGTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHASPGGP*QLQSRC
Trigger: GCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGA...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATATCCCCAGGAGGACCATaGCAATTGCAGTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKISPGGP*QLQSRC
Trigger: GCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGA...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp ATATATCCGTCATCTCACATAGTTATCCTTTTTGTATGTGTGGCAAGAGCACCTTCCCCAGGAGGACCATaGCAATTGCAGTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: IYPSSHIVILFVCVARAPSPGGP*QLQSRC
Trigger: GCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGA...AGGTGCTCTTGCCACACATACAAAAAGGATAACTATGTGAGATGACGGATATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACTCCCCAGGAGGACCATaGCAATTGCAGTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: FKGNQREIINEVWFDSPYSPGGP*QLQSRC
Trigger: GCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGA...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTCCTAGAATTTTGGCCTaGAAGTCCTCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTPRILA*KSSRKV
Trigger: CACTTTCCTGGAGGACTTGCAGGCCAAAATTCTAGG...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp AGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTGACCTATTTTCTCCCTCTCCCTaGATCTCCCCAATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RALDSFILHIFNFGSFDLFSPSP*ISPIPD
Trigger: ATCAGGGATTGGGGAGATGCAGGGAGAGGGAGAAAA...TAGGTCAAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CCA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATGGCACACTGTGAAGCTAAAGGAATaGCTCTGTGTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SSITSGCSHGKGKLIWHTVKLKE*LCVIIC
Trigger: ACAGATGATGACACAGAGCCATTCCTTTAGCTTCAC...AGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR TCA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCTGACGGCGCCAAGTaGATCCATGATGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: FKGNQREIINEVWFDSPYADGAK*IHDDFS
Trigger: GCTAAAATCATCATGGATTCACTTGGCGCCGTCAGC...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp GTCTTGTACGTTAGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGAGTCTCTTTTTCAGAGTaGAACACCTCCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: VLYVRALDSFILHIFNFGVSFSE*NTSSNW
Trigger: CCAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGAC...TCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCTAACGTACAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp CAGCACCAGCTTGGTAGAGCTACTAATAGAGCCATCTGGGAACAAGTCCTTGATGCAGAAGCACAAACATaGTTAGGTCGTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: QHQLGRATNRAIWEQVLDAEAQT*LGRCFY
Trigger: ATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGC...ATCAAGGACTTGTTCCCAGATGGCTCTATTAGTAGCTCTACCAAGCTGGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR GCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTGCCACAAAGGAACTGTaGAGGAACTTCTGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLATKEL*RNFWAY
Trigger: GTACGCCCAGAAGTTCCTGCACAGTTCCTTTGTGGC...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATAGCCTTCCTCAGTTACTaGCACAAAGGAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKIAFLSY*HKGTVQ
Trigger: CTGCACAGTTCCTTTGTGGCAGTAACTGAGGAAGGC...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATGCCTTCCTCAGTTACTaGCACAAAGGAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNAFLSY*HKGTVQ
Trigger: CTGCACAGTTCCTTTGTGGCAGTAACTGAGGAAGGC...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATATTTTTGGAGAGACGGTaGTGGCTGGGCAACGAACTA +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKIFLERR*WLGNEL
Trigger: TAGTTCGTTGCCCAGCCACCACCGTCTCTCCAAAAA...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp GGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGGCACAAAGAAATTCTTCCATATGCCCTaGACTAGTCCACTCTACCAA +
Preference number: 4 (lower is better)
Translates to: GRLSMRFGLTHLTHGTKKFFHMP*TSPLYQ
Trigger: TTGGTAGAGTGGACTAGTCCAGGGCATATGGAAGAA...TTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACATACTACAACAGATaGACCTCAAGAACACCATGC +
Preference number: 4 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSTYYNR*TSRTPC
Trigger: GCATGGTGTTCTTGAGGTTCATCTGTTGTAGTATGT...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGATAGTTCTCCACATCTaGTTCAGCAGTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMIVLHI*FSSGFP
Trigger: TGGAAAACCACTGCTGAAGCAGATGTGGAGAACTAT...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269489.9
CDS-3UTR GCA 90 bp CTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTCCTAGAATTTTGGCCTaGAAGTCCTCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LSKETKGRLSMRFGLTHLPRILA*KSSRKV
Trigger: CACTTTCCTGGAGGACTTGCAGGCCAAAATTCTAGG...AAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp ATATATCCGTCATCTCACATAGTTATCCTTTTTGTATGTGTGGCAAGAGCACCTCCTAGAATTTTGGCCTaGAAGTCCTCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: IYPSSHIVILFVCVARAPPRILA*KSSRKV
Trigger: CACTTTCCTGGAGGACTTGCAGGCCAAAATTCTAGG...AGGTGCTCTTGCCACACATACAAAAAGGATAACTATGTGAGATGACGGATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCTCAAACCGGGGCAAGTaGAGATTCACCTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSSNRGK*RFTFLS
Trigger: AGAAAGAAAGGTGAATCTGCACTTGCCCCGGTTTGA...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGAACACCATGCTAAGTaGAAGACGCCAGACACAAAA +
Preference number: 4 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHEHHAK*KTPDTK
Trigger: TTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTC...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAGTGAAGCTAAAGGAATaGCTCTGTGTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTVKLKE*LCVIIC
Trigger: ACAGATGATGACACAGAGCCATTCCTTTAGCTTCAC...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGAACATTTTCATGACCTaGGGCGGATGTGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGNIFMT*GGCDSK
Trigger: TTTACTGTCACATCCGCCCCAGGTCATGAAAATGTT...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp GGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGGCACAAAGAAAAACATTTTCATGACCTaGGGCGGATGTGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: GRLSMRFGLTHLTHGTKKNIFMT*GGCDSK
Trigger: TTTACTGTCACATCCGCCCCAGGTCATGAAAATGTT...TTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACACAGAAAACAACTCAGTaGTGCCTAGGATTGGGAATA +
Preference number: 4 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTQKTTQ*CLGLGI
Trigger: TATTCCCAATCCTAGGCACCACTGAGTTGTTTTCTG...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR CAA 72 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTaGACTCACCTTACGCATGGCACAAAGAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: KETKGRLSMRFG*THLTHGTKKRT
Trigger: TGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR CAA 72 bp ATTTTATCTATTATCTTCTCCAGGCCATCGATGTCGTaGGGCAGAAGCACAAACATGCTTAGGTCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: ILSIIFSRPSMS*GRSTNMLRSLF
Trigger: AAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATGGCCTGGAGAAGATAATAGATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR TCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTFSLYS*ALRLFF
Trigger: GAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCATCGACTTTCATCGGCTaGATTTACAAAATCAACAGG +
Preference number: 4 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSSTFIG*IYKINR
Trigger: CCTGTTGATTTTGTAAATGCAGCCGATGAAAGTCGA...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATTCAAACCGGGGCAAGTaGAGATTCACCTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNSNRGK*RFTFLS
Trigger: AGAAAGAAAGGTGAATCTGCACTTGCCCCGGTTTGA...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGTTCTCTCCTTTCGTGTaGACAAAACTACAAGATACC +
Preference number: 4 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMFSPFV*TKLQDT
Trigger: GGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAA...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACTAATAGAGCCATCTaGGAACAAGTCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTTNRAI*EQVLDF
Trigger: AAAATCAAGGACTTGTTCCCAGATGGCTCTATTAGT...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCATTCTTCCATATGCCCTaGACTAGTCCACTCTACCAA +
Preference number: 4 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAFFHMP*TSPLYQ
Trigger: TTGGTAGAGTGGACTAGTCCAGGGCATATGGAAGAA...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCTTCCATATGCCCTaGACTAGTCCACTCTACCAA +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLFFHMP*TSPLYQ
Trigger: TTGGTAGAGTGGACTAGTCCAGGGCATATGGAAGAA...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CCCTGCATCTCCCCAATCCCTGATAGTTACCATTTTATTCTCTTTCTCTATGTATTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PCISPIPDSYHFILFLYVFSLYS*ALRLFF
Trigger: GAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAA...TACATAGAGAAAGAGAATAAAATGGTAACTATCAGGGATTGGGGAGATGCAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR TCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTTCTCTTTCCTATGTGTaGTTTGCCACAATATCTGTT +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTSLSYV*FATISV
Trigger: AACAGATATTGTGGCAAATCACACATAGGAAAGAGA...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTACATACTACAACAGATaGACCTCAAGAACACCATGC +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLTYYNR*TSRTPC
Trigger: GCATGGTGTTCTTGAGGTTCATCTGTTGTAGTATGT...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGGTTATTACAAAGCTAACTATTaGTTTTTCATATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LTLRMAQRKGHFTFEDGYYKANY*FFIWPS
Trigger: GCTGGGCCATATGAAAAATCAATAGTTAGCTTTGTA...ATAACCATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR TCA 90 bp CTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGGTTATCGTTGGAAAACAGTTTaGCTGTTTCTTACAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LTLRMAQRKGHFTFEDGYRWKTV*LFLTKL
Trigger: TAGCTTTGTAAGAAACAGTCAAACTGTTTTCCAACG...ATAACCATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR GCA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTGAATTGTTGATGTACTaGTTCTGTGTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTELLMY*FCVLNL
Trigger: GAGATTGAGAACACAGAAGCAGTACATCAACAATTC...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000438844.1
CDS-3UTR GCA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAGCAGAAGCACAAACATaGTTAGGTCGTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTAEAQT*LGRCFY
Trigger: ATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGC...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTGAACACCATGCTAAGTaGAAGACGCCAGACACAAAA +
Preference number: 4 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLEHHAK*KTPDTK
Trigger: TTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTC...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGAATAGGTCTTTTCCATaGAATGGAATAGTATTCGGC +
Preference number: 4 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMNRSFP*NGIVFG
Trigger: GCCGAATACTATTCCATTGCATGGAAAAGACCTATT...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGAAAACCACCATGAGATaGCACTTTGTACCTACAAAA +
Preference number: 4 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGKTTMR*HFVPTK
Trigger: TTTTGTAGGTACAAAGTGGCATCTCATGGTGGTTTT...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTGTGAAGCTAAAGGAATaGCTCTGTGTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLVKLKE*LCVIIC
Trigger: ACAGATGATGACACAGAGCCATTCCTTTAGCTTCAC...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACCAGAAAACAACTCAGTaGTGCCTAGGATTGGGAATA +
Preference number: 4 (lower is better)
Translates to: FKGNQREIINEVWFDSPYQKTTQ*CLGLGI
Trigger: TATTCCCAATCCTAGGCACCACTGAGTTGTTTTCTG...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLFSLYS*ALRLFF
Trigger: GAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAA...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCATTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAFSLYS*ALRLFF
Trigger: GAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAA...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTACATACTACAACAGATaGACCTCAAGAACACCATGC +
Preference number: 4 (lower is better)
Translates to: NTMLSARRQTQNTTCIMITYYNR*TSRTPC
Trigger: GCATGGTGTTCTTGAGGTTCATCTGTTGTAGTATGT...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCGAATTGTTGATGTACTaGTTCTGTGTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSELLMY*FCVLNL
Trigger: GAGATTGAGAACACAGAAGCAGTACATCAACAATTC...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000438844.1
CDS-3UTR GCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATATCGACTTTCATCGGCTaGATTTACAAAATCAACAGG +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKISTFIG*IYKINR
Trigger: CCTGTTGATTTTGTAAATGCAGCCGATGAAAGTCGA...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp AGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTGACCTAGCAGAAGCACAAACATaGTTAGGTCGTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: RALDSFILHIFNFGSFDLAEAQT*LGRCFY
Trigger: ATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGC...TAGGTCAAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCATTCTCTCCTTTCGTGTaGACAAAACTACAAGATACC +
Preference number: 4 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAFSPFV*TKLQDT
Trigger: GGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAA...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCAAAACCACCATGAGATaGCACTTTGTACCTACAAAA +
Preference number: 4 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSKTTMR*HFVPTK
Trigger: TTTTGTAGGTACAAAGTGGCATCTCATGGTGGTTTT...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR GCA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGAATTGTTGATGTACTaGTTCTGTGTTCTCAATCAC +
Preference number: 4 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHELLMY*FCVLNH
Trigger: GTGATTGAGAACACAGAAGCAGTACATCAACAATTC...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344731.10
CDS-3UTR GCA 90 bp AGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTGACCTAGTACAGATTTACTTGTaGTCACCTCTTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RALDSFILHIFNFGSFDLVQIYL*SPLFLQ
Trigger: CTGAAGAAAAAGAGGTGAGCACAAGTAAATCTGTAC...TAGGTCAAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTGTGAAGCTAAAGGAATaGCTCTGTGTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLVKLKE*LCVIIC
Trigger: ACAGATGATGACACAGAGCCATTCCTTTAGCTTCAC...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCAGTTCGTACTCTTTACTaGAGAGACTTTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAVRTLY*RDFLSF
Trigger: AAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTGTTCGTACTCTTTACTaGAGAGACTTTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLVRTLY*RDFLSF
Trigger: AAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp GGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATGGCACAAAGAAAGGCATCCTCTCCATCTaGTATATTGTTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: GRLSMRFGLTHLTHGTKKGILSI*YIVLFC
Trigger: ACAAAATAAAACAATATACCAGATGGAGAGGATGCC...TTTCTTTGTGCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTCAGAAAACAACTCAGTaGTGCCTAGGATTGGGAATA +
Preference number: 4 (lower is better)
Translates to: NTMLSARRQTQNTTCIMIQKTTQ*CLGLGI
Trigger: TATTCCCAATCCTAGGCACCACTGAGTTGTTTTCTG...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
3UTR CAA 72 bp TTCCTTAGTATTTTCTTTCTTAAACTCCCTGTCCCATaGCCCTTTAAAATAAACCATGTTCACCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: FLSIFFLKLPVP*PFKINHVHQHQ
Trigger: CTGGTGCTGGTGAACATGGTTTATTTTAAAGGGCAATGGGACAGGGAGTTTAAGAAAGAAAATACTAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR TCA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATTCTCTTTCCTATGTGTaGTTTGCCACAATATCTGTT +
Preference number: 4 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNSLSYV*FATISV
Trigger: AACAGATATTGTGGCAAATCACACATAGGAAAGAGA...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR TCA 90 bp CTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTTACAAAGCTAACTATTaGTTTTTCATATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSKETKGRLSMRFGLTHLYKANY*FFIWPS
Trigger: GCTGGGCCATATGAAAAATCAATAGTTAGCTTTGTA...AAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR TCA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATCGTTGGAAAACAGTTTaGCTGTTTCTTACAAAGCTA +
Preference number: 4 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNRWKTV*LFLTKL
Trigger: TAGCTTTGTAAGAAACAGTCAAACTGTTTTCCAACG...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR GCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTTCGACTTTCATCGGCTaGATTTACAAAATCAACAGG +
Preference number: 4 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLSTFIG*IYKINR
Trigger: CCTGTTGATTTTGTAAATGCAGCCGATGAAAGTCGA...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATAGCAGAAGCACAAACATaGTTAGGTCGTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: YSLLERLSLLSCAQNYKIAEAQT*LGRCFY
Trigger: ATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGC...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR GCA 90 bp CTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTAATAGGTCTTTTCCATaGAATGGAATAGTATTCGGC +
Preference number: 4 (lower is better)
Translates to: LSKETKGRLSMRFGLTHLNRSFP*NGIVFG
Trigger: GCCGAATACTATTCCATTGCATGGAAAAGACCTATT...AAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTACTAATAGAGCCATCTaGGAACAAGTCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLTNRAI*EQVLDF
Trigger: AAAATCAAGGACTTGTTCCCAGATGGCTCTATTAGT...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp ATATATCCGTCATCTCACATAGTTATCCTTTTTGTATGTGTGGCAAGAGCACCTTCCTTTTTGTATGTGTaGCAAGAGCACCTTAAATCT +
Preference number: 4 (lower is better)
Translates to: IYPSSHIVILFVCVARAPSFLYV*QEHLKS
Trigger: AGATTTAAGGTGCTCTTGCCACACATACAAAAAGGA...AGGTGCTCTTGCCACACATACAAAAAGGATAACTATGTGAGATGACGGATATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR GCA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTAATAGGTCTTTTCCATaGAATGGAATAGTATTCGGC +
Preference number: 4 (lower is better)
Translates to: NTMLSARRQTQNTTCIMINRSFP*NGIVFG
Trigger: GCCGAATACTATTCCATTGCATGGAAAAGACCTATT...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGGCATCCTCTCCATCTaGTATATTGTTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: FKGNQREIINEVWFDSPYGILSI*YIVLFC
Trigger: ACAAAATAAAACAATATACCAGATGGAGAGGATGCC...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CCA 90 bp TACGTTAGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTAGTATGAAGCATAACTaGTGTTACAAACACCATCTT +
Preference number: 4 (lower is better)
Translates to: YVRALDSFILHIFNFGSFSMKHN*CYKHHL
Trigger: AAGATGGTGTTTGTAACACCAGTTATGCTTCATACT...AAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCTAACGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CCA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTTCAGCTGAGGAATCTTaGGCAAGTTATTTAAACTCT +
Preference number: 4 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLSAEES*ASYLNS
Trigger: AGAGTTTAAATAACTTGCCCAAGATTCCTCAGCTGA...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
3UTR CAA 72 bp TTTCATAATCATATGAGTAACACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCATGGCAACGATCATCT +
Preference number: 4 (lower is better)
Translates to: FHNHMSNTGSCF*LKAAMPWQRSS
Trigger: AGATGATCGTTGCCATGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGTGTTACTCATATGATTATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CAA 90 bp ACTTCTGGGCGTACAACCCGGAGCCTGACGACATTCCCGAGTAGTCGGCTTTGTTTGCTGACAAAGGGTTaGCTGGCAGAATCGACGGGG +
Preference number: 5 (lower is better)
Translates to: TSGRTTRSLTTFPSSRLCLLTKG*LAESTG
Trigger: CCCCGTCGATTCTGCCAGCAAACCCTTTGTCAGCAA...ACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CAA 90 bp GGCTTTGTGCTCACTGAAGGCATCGCCCATCCCCATGGCAGCCAGGACCGCCTCGCCAGTTATGTGATCTaGTTAAAAACTGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GFVLTEGIAHPHGSQDRLASYVI*LKTGGK
Trigger: TTTTCCTCCAGTTTTTAACAAGATCACATAACTGGC...GAGGCGGTCCTGGCTGCCATGGGGATGGGCGATGCCTTCAGTGAGCACAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS TCA 90 bp TTTTCTTCAGCCTTTATTCTTGAGCTCTTCGTCTCTTTTTCAGAGTaGAACACCTCCTCCAACTGGGAAGCGGTGGCTCCTCGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: FSSAFILELFVSFSE*NTSSNWEAVAPRVP
Trigger: GGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000415733.1
ENST00000431153.5
ENST00000438844.1
ENST00000479842.1
CDS-3UTR CAA 90 bp CAGCCAGGACCGCCTCTAGATCGTAACCGTCCTCCACCTCAAACCGGGGCAAGTGTTTTCTTCAGCTCTTaGAAAAGATCAAACCCAAGT +
Preference number: 5 (lower is better)
Translates to: QPGPPLDRNRPPPQTGASVFFSS*KRSNPS
Trigger: ACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAAC...ACTTGCCCCGGTTTGAGGTGGAGGACGGTTACGATCTAGAGGCGGTCCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CAA 90 bp CAGCCAGGACCGCCTCTAGATCGTAACCGTCCTCCACCTCAAACCGGGGCAAGTTCCACATCATTTGTTTaGCTTTCAACCCAGGAATTA +
Preference number: 5 (lower is better)
Translates to: QPGPPLDRNRPPPQTGASSTSFV*LSTQEL
Trigger: TAATTCCTGGGTTGAAAGCAAAACAAATGATGTGGA...ACTTGCCCCGGTTTGAGGTGGAGGACGGTTACGATCTAGAGGCGGTCCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CAA 90 bp ACTTCTGGGCGTACAACCCGGAGCCTGACGACATTCCCGAGTAGTCGGCTTTGTCAGTTTCCACATCATTaGTTTTGCTTTCAACCCAGG +
Preference number: 5 (lower is better)
Translates to: TSGRTTRSLTTFPSSRLCQFPHH*FCFQPR
Trigger: CCTGGGTTGAAAGCAAAACAAATGATGTGGAAACTG...ACAAAGCCGACTACTCGGGAATGTCGTCAGGCTCCGGGTTGTACGCCCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS CCA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATaGCACACTGGTGGGCATGTCTTCTGGAGAGGTGCTTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: SSITSGCSHGKGKLI*HTGGHVFWRGASNS
Trigger: AGAGTTGGAAGCACCTCTCCAGAAGACATGCCCACCAGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATCGAGACCTCGGGTTTTaGGAGAGACGGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHRDLGF*ERRWWL
Trigger: CAGCCACCACCGTCTCTCCAAAAACCCGAGGTCTCG...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACCGAGACCTCGGGTTTTaGGAGAGACGGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: FKGNQREIINEVWFDSPYRDLGF*ERRWWL
Trigger: CAGCCACCACCGTCTCTCCAAAAACCCGAGGTCTCG...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGAGGCCATCGATGTCGTaGGGCAGAAGCACAAACATG +
Preference number: 5 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMRPSMS*GRSTNM
Trigger: CATGTTTGTGCTTCTGCCCAACGACATCGATGGCCT...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATAGGAGGACCATGCCAATaGCAGTCAAGATGCCCACAG +
Preference number: 5 (lower is better)
Translates to: YSLLERLSLLSCAQNYKIGGPCQ*QSRCPQ
Trigger: CTGTGGGCATCTTGACTGCAATTGGCATGGTCCTCC...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp ATATATCCGTCATCTCACATAGTTATCCTTTTTGTATGTGTGGCAAGAGCACCTGGAGGACCATGCCAATaGCAGTCAAGATGCCCACAG +
Preference number: 5 (lower is better)
Translates to: IYPSSHIVILFVCVARAPGGPCQ*QSRCPQ
Trigger: CTGTGGGCATCTTGACTGCAATTGGCATGGTCCTCC...AGGTGCTCTTGCCACACATACAAAAAGGATAACTATGTGAGATGACGGATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCAGGAGGACCATGCCAATaGCAGTCAAGATGCCCACAG +
Preference number: 5 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAGGPCQ*QSRCPQ
Trigger: CTGTGGGCATCTTGACTGCAATTGGCATGGTCCTCC...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS TCA 90 bp GAGTCTTGCCTGCTGAGTCATGTCCAGACTCCTACCTCAGAAGTATaGAGCATAACTGGTGTTACAAACACCATCTTCAGAACAGTGATT +
Preference number: 5 (lower is better)
Translates to: ESCLLSHVQTPTSEV*SITGVTNTIFRTVI
Trigger: AATCACTGTTCTGAAGATGGTGTTTGTAACACCAGTTATGCTTCATACTTCTGAGGTAGGAGTCTGGACATGACTCAGCAGGCAAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCATTCACCAGCACCAGCTaGGTAGAGCTACTAATAGAG +
Preference number: 5 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSFTSTS*VELLIE
Trigger: CTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAA...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACATTCACCAGCACCAGCTaGGTAGAGCTACTAATAGAG +
Preference number: 5 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTFTSTS*VELLIE
Trigger: CTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAA...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp CTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGGTTATTTCACCAGCACCAGCTaGGTAGAGCTACTAATAGAG +
Preference number: 5 (lower is better)
Translates to: LTLRMAQRKGHFTFEDGYFTSTS*VELLIE
Trigger: CTCTATTAGTAGCTCTACCAAGCTGGTGCTGGTGAA...ATAACCATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTAGGCCATCGATGTCGTaGGGCAGAAGCACAAACATG +
Preference number: 5 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLRPSMS*GRSTNM
Trigger: CATGTTTGTGCTTCTGCCCAACGACATCGATGGCCT...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TACGTTAGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTAGGCCATCGATGTCGTaGGGCAGAAGCACAAACATG +
Preference number: 5 (lower is better)
Translates to: YVRALDSFILHIFNFGSFRPSMS*GRSTNM
Trigger: CATGTTTGTGCTTCTGCCCAACGACATCGATGGCCT...AAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCTAACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATAGGCCATCGATGTCGTaGGGCAGAAGCACAAACATG +
Preference number: 5 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNRPSMS*GRSTNM
Trigger: CATGTTTGTGCTTCTGCCCAACGACATCGATGGCCT...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGGGGAGGTTCTCATTTaGCCCATCGCCTATTTATCC +
Preference number: 5 (lower is better)
Translates to: FKGNQREIINEVWFDSPYGEVLI*PIAYLS
Trigger: GGATAAATAGGCGATGGGCAAAATGAGAACCTCCCC...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS TCA 90 bp TGCTTCTGTGTTCTCAATCACCTCTTTTTCTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: CFCVLNHLFFFSLYS*ALRLFFRVKHLLQL
Trigger: CAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGATTGAGAACACAGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344731.10
ENST00000431153.5
CDS-3UTR CAA 90 bp TCATCCATAACTTCTGGGTGTAGCCATGGCAAGGGTAAACTGATATGGCACACTAACATGCTTAGGTCGTaGTTTTTATATGGAATCCCT +
Preference number: 5 (lower is better)
Translates to: SSITSGCSHGKGKLIWHTNMLRS*FLYGIP
Trigger: AGGGATTCCATATAAAAACAACGACCTAAGCATGTT...AGTGTGCCATATCAGTTTACCCTTGCCATGGCTACACCCAGAAGTTATGGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTTGSCF*LKAAMP
Trigger: TGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGT...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTCAATGAGGTTTGGTTaGACTCACCTTACGCATGGC +
Preference number: 5 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLSMRFG*THLTHG
Trigger: GCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGA...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACTCAATGAGGTTTGGTTaGACTCACCTTACGCATGGC +
Preference number: 5 (lower is better)
Translates to: FKGNQREIINEVWFDSPYSMRFG*THLTHG
Trigger: GCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGA...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGTTGCCACAATATCTGTaGGGGAATAGTAACATGAGC +
Preference number: 5 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGLPQYL*GNSNMS
Trigger: GCTCATGTTACTATTCCCCAACAGATATTGTGGCAA...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGTTTCCTATGTGTGATTaGCCACAATATCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGFPMCD*PQYLLG
Trigger: CCCCAACAGATATTGTGGCAAATCACACATAGGAAA...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCACAGTGGTGCCTAGGATaGGGAATATTAATAGACATG +
Preference number: 5 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSQWCLG*GILIDM
Trigger: CATGTCTATTAATATTCCCAATCCTAGGCACCACTG...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp GCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAACTCAGTGGTGCCTAGGATaGGGAATATTAATAGACATG +
Preference number: 5 (lower is better)
Translates to: ATLFLTAKKWEQSKCPSTQWCLG*GILIDM
Trigger: CATGTCTATTAATATTCCCAATCCTAGGCACCACTG...AGTTGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGCAGTGGTGCCTAGGATaGGGAATATTAATAGACATG +
Preference number: 5 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMQWCLG*GILIDM
Trigger: CATGTCTATTAATATTCCCAATCCTAGGCACCACTG...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS TCA 90 bp TTCAGCCTTTATTCTTACCACCTCTTTTTCTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: FSLYSYHLFFFSLYS*ALRLFFRVKHLLQL
Trigger: CAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGGTAAGAATAAAGGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000479842.1
CDS TCA 90 bp TACAGATTTACTTGTGCTCACCTCTTTTTCTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: YRFTCAHLFFFSLYS*ALRLFFRVKHLLQL
Trigger: CAGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGAGCACAAGTAAATCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTGTTTTCTTCAGCTCTTaGAAAAGATCAAACCCAAGT +
Preference number: 5 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTVFFSS*KRSNPS
Trigger: ACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAAC...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCACTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSLQPLF*SSSSLF
Trigger: AAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAG...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAAAACTCCCTGTCCCATaGCCCTTTAAAATAAACCAT +
Preference number: 5 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSKLPVP*PFKINH
Trigger: ATGGTTTATTTTAAAGGGCAATGGGACAGGGAGTTT...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TTTGACTCACCTTACGCATGGCACAAAGAAAAGGACATTTCACTTTCGAGGATGAAACTCCCTGTCCCATaGCCCTTTAAAATAAACCAT +
Preference number: 5 (lower is better)
Translates to: FDSPYAWHKEKDISLSRMKLPVP*PFKINH
Trigger: ATGGTTTATTTTAAAGGGCAATGGGACAGGGAGTTT...CATCCTCGAAAGTGAAATGTCCTTTTCTTTGTGCCATGCGTAAGGTGAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTTCAATGAGGTTTGGTTaGACTCACCTTACGCATGGC +
Preference number: 5 (lower is better)
Translates to: NTMLSARRQTQNTTCIMISMRFG*THLTHG
Trigger: GCCATGCGTAAGGTGAGTCAAACCAAACCTCATTGA...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp CTCTTTCCTATGTGTGATTTGCCACAATATCTGTTGGGGAATAGTAACATGAGCTTGCCACAATATCTGTaGGGGAATAGTAACATGAGC +
Preference number: 5 (lower is better)
Translates to: LFPMCDLPQYLLGNSNMSLPQYL*GNSNMS
Trigger: GCTCATGTTACTATTCCCCAACAGATATTGTGGCAA...GCTCATGTTACTATTCCCCAACAGATATTGTGGCAAATCACACATAGGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp CAGATGAACCTCAAGAACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTGATGTTGGTGAGGATTaGAAGACACTAGTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: QMNLKNTMLSARRQTQNTDVGED*KTLVLN
Trigger: GTTTAAAACTAGTGTCTTCAAATCCTCACCAACATC...AGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTTCTTGAGGTTCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATAAACTCCCTGTCCCATaGCCCTTTAAAATAAACCAT +
Preference number: 5 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHKLPVP*PFKINH
Trigger: ATGGTTTATTTTAAAGGGCAATGGGACAGGGAGTTT...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AGAGCAACATTATTCCTAACAGCCAAGAAGTGGGAACAATCCAAATGTCCCTCAAACATGCTTAGGTCGTaGTTTTTATATGGAATCCCT +
Preference number: 5 (lower is better)
Translates to: RATLFLTAKKWEQSKCPSNMLRS*FLYGIP
Trigger: AGGGATTCCATATAAAAACAACGACCTAAGCATGTT...TGAGGGACATTTGGATTGTTCCCACTTCTTGGCTGTTAGGAATAATGTTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp CATCGATGTCGTTGGGCAGAAGCACAAACATGCTTAGGTCGTTGTTTTTATATGAACATGCTTAGGTCGTaGTTTTTATATGGAATCCCT +
Preference number: 5 (lower is better)
Translates to: HRCRWAEAQTCLGRCFYMNMLRS*FLYGIP
Trigger: AGGGATTCCATATAAAAACAACGACCTAAGCATGTT...CATATAAAAACAACGACCTAAGCATGTTTGTGCTTCTGCCCAACGACATCGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438844.1
CDS-3UTR CAA 90 bp AAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCATACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: KETKGRLSMRFGLTHLTHTGSCF*LKAAMP
Trigger: TGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGT...ATGCGTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCATTTCCTATGTGTGATTaGCCACAATATCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAFPMCD*PQYLLG
Trigger: CCCCAACAGATATTGTGGCAAATCACACATAGGAAA...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACATCTCCATCTGGTATATaGTTTTATTTTGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTSPSGI*FYFVLA
Trigger: TGCCAGGACAAAATAAAACAATATACCAGATGGAGA...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp ATCCTGGATGTTGGTGAGGATTTGAAGACACTAGTTTTAAACATTCCTGGTGGGACGTTGGAAAACAGTTaGACTGTTTCTTACAAAGCT +
Preference number: 5 (lower is better)
Translates to: ILDVGEDLKTLVLNIPGGTLENS*TVSYKA
Trigger: AGCTTTGTAAGAAACAGTCAAACTGTTTTCCAACGT...CCCACCAGGAATGTTTAAAACTAGTGTCTTCAAATCCTCACCAACATCCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp GTTCGTACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAACGTTGGAAAACAGTTaGACTGTTTCTTACAAAGCT +
Preference number: 5 (lower is better)
Translates to: VRTLYWRDFLSFRVHKTTTLENS*TVSYKA
Trigger: AGCTTTGTAAGAAACAGTCAAACTGTTTTCCAACGT...TGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTACGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS-3UTR CAA 90 bp TACGTTAGAGCTCTAGACTCGTTCATCCTACATATCTTCAACTTTGGATCCTTTCTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: YVRALDSFILHIFNFGSFLQPLF*SSSSLF
Trigger: AAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAG...AAAGGATCCAAAGTTGAAGATATGTAGGATGAACGAGTCTAGAGCTCTAACGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTTTGCCACAATATCTGTaGGGGAATAGTAACATGAGC +
Preference number: 5 (lower is better)
Translates to: NTMLSARRQTQNTTCIMILPQYL*GNSNMS
Trigger: GCTCATGTTACTATTCCCCAACAGATATTGTGGCAA...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp ATCATCCTTGTCTTGTACGTTAGAGCTCTAGACTCGTTCATCCTACATATCTTCTCTGTACAGATTTACTaGTGCTCACCTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: IILVLYVRALDSFILHIFSVQIY*CSPLFL
Trigger: AAGAAAAAGAGGTGAGCACAAGTAAATCTGTACAGA...GAAGATATGTAGGATGAACGAGTCTAGAGCTCTAACGTACAAGACAAGGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS-3UTR CAA 90 bp TTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATACCAATGTTTTCTTCAGCTCTTaGAAAAGATCAAACCCAAGT +
Preference number: 5 (lower is better)
Translates to: FTGETFSPFVCTKLQDTNVFFSS*KRSNPS
Trigger: ACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAAC...ATTGGTATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AACACCATGCTAAGTGCAAGACGCCAGACACAAAATACTACATGTATTATGATTCTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: NTMLSARRQTQNTTCIMILQPLF*SSSSLF
Trigger: AAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAG...AATCATAATACATGTAGTATTTTGTGTCTGGCGTCTTGCACTTAGCATGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTCTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLLQPLF*SSSSLF
Trigger: AAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAG...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TGGGAACAATCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTAACATGCTTAGGTCGTaGTTTTTATATGGAATCCCT +
Preference number: 5 (lower is better)
Translates to: WEQSKCPSTGEPRNKIGLNMLRS*FLYGIP
Trigger: AGGGATTCCATATAAAAACAACGACCTAAGCATGTT...AAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGATTGTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp AAAACAACTCAGTGGTGCCTAGGATTGGGAATATTAATAGACATGAGGAAACTTACTGGTAGTTGTTTTTaGCTAAAAGCAGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: KTTQWCLGLGILIDMRKLTGSCF*LKAAMP
Trigger: TGGCATTGCTGCTTTTAGCAAAAAACAACTACCAGT...AAGTTTCCTCATGTCTATTAATATTCCCAATCCTAGGCACCACTGAGTTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TACTCTTTACTGGAGAGACTTTCTCTCCTTTCGTGTGCACAAAACTACAAGATATCTCCATCTGGTATATaGTTTTATTTTGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: YSLLERLSLLSCAQNYKISPSGI*FYFVLA
Trigger: TGCCAGGACAAAATAAAACAATATACCAGATGGAGA...TATCTTGTAGTTTTGTGCACACGAAAGGAGAGAAAGTCTCTCCAGTAAAGAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTACGCCAGTTATGTGATCTaGTTAAAAACTGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: FKGNQREIINEVWFDSPYASYVI*LKTGGK
Trigger: TTTTCCTCCAGTTTTTAACAAGATCACATAACTGGC...GTAAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp TCCAAATGTCCCTCAACTGGTGAACCTAGAAATAAAATAGGTCTTTTCCATGCAGCCAGTTATGTGATCTaGTTAAAAACTGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SKCPSTGEPRNKIGLFHAASYVI*LKTGGK
Trigger: TTTTCCTCCAGTTTTTAACAAGATCACATAACTGGC...TGCATGGAAAAGACCTATTTTATTTCTAGGTTCACCAGTTGAGGGACATTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000438844.1
CDS-3UTR CAA 90 bp CTTTCAAAGGAAACCAAAGGGAGATTATCAATGAGGTTTGGTTTGACTCACCTTGATGTTGGTGAGGATTaGAAGACACTAGTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LSKETKGRLSMRFGLTHLDVGED*KTLVLN
Trigger: GTTTAAAACTAGTGTCTTCAAATCCTCACCAACATC...AAGGTGAGTCAAACCAAACCTCATTGATAATCTCCCTTTGGTTTCCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000344731.10
CDS TCA 72 bp AAGATCAAACCCAAGTCGAGTGCTGACGGCGCCAAGTaGATCCATGATGATTTTAGCGAGACCTCGGGTTTT +
Preference number: 6 (lower is better)
Translates to: KIKPKSSADGAK*IHDDFSETSGF
Trigger: AAAACCCGAGGTCTCGCTAAAATCATCATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269489.9
ENST00000344731.10
ENST00000431153.5
ENST00000438844.1
ENST00000479842.1
CDS CAA 90 bp CTGCTTCTGTGTTCTCAATCACCTCTTTTTCTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTCCTCCAACT +
Preference number: 6 (lower is better)
Translates to: LLLCSQSPLFLQPLF*SSSSLFQSETPPPT
Trigger: AGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGATTGAGAACACAGAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344731.10
ENST00000431153.5
CDS CAA 90 bp CTTCAGCCTTTATTCTTACCACCTCTTTTTCTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTCCTCCAACT +
Preference number: 6 (lower is better)
Translates to: LQPLFLPPLFLQPLF*SSSSLFQSETPPPT
Trigger: AGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGGTAAGAATAAAGGCTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000479842.1
CDS CAA 90 bp GTACAGATTTACTTGTGCTCACCTCTTTTTCTTCAGCCTTTATTCTaGAGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTCCTCCAACT +
Preference number: 6 (lower is better)
Translates to: VQIYLCSPLFLQPLF*SSSSLFQSETPPPT
Trigger: AGTTGGAGGAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGAGCACAAGTAAATCTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415733.1
CDS TCA 72 bp GTTCTCAATCACCTCTTTTTCTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTC +
Preference number: 6 (lower is better)
Translates to: VLNHLFFFSLYS*ALRLFFRVKHL
Trigger: GAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGATTGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344731.10
ENST00000431153.5
CDS TCA 72 bp TATTCTTACCACCTCTTTTTCTTCAGCCTTTATTCTTaGGCTCTTCGTCTCTTTTTCAGAGTGAAACACCTC +
Preference number: 6 (lower is better)
Translates to: YSYHLFFFSLYS*ALRLFFRVKHL
Trigger: GAGGTGTTTCACTCTGAAAAAGAGACGAAGAGCTCAAGAATAAAGGCTGAAGAAAAAGAGGTGGTAAGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269489.9
ENST00000479842.1
CDS CAA 72 bp AGTGAGTTTGCTTATTTCAGTCAAAAACTTTTGGAATaGTTGATGTACTGCTTCTGTGTTCTCAATCACCTC +
Preference number: 6 (lower is better)
Translates to: SEFAYFSQKLLE*LMYCFCVLNHL
Trigger: GAGGTGATTGAGAACACAGAAGCAGTACATCAACAATTCCAAAAGTTTTTGACTGAAATAAGCAAACTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344731.10
ENST00000431153.5