RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINB12 (Homo sapiens)

Ensembl gene IDs: ENSG00000166634

Ensembl transcript IDs: ENST00000269491.6, ENST00000382768.2, ENST00000680447.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTaGATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGG +
Preference number: 1 (lower is better)
Translates to: STMPAALLLTPACAG*IKGASHRWEFLELG
Trigger: CCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 90 bp TATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTaGCATGAGACCTCTCGGAAGACACAAAAGTCCACGTGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: YGHHAQAQACCHHVV*HETSRKTQKSTWPE
Trigger: TTCTGGCCACGTGGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 90 bp ATTGCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTaGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCACGTGGC +
Preference number: 1 (lower is better)
Translates to: IAMDTMPRLKPVVTM*SGMRPLGRHKSPRG
Trigger: GCCACGTGGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 90 bp GCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTCGGGCAGTaGTGCCAAGTCAGACATGGAAACAGCCCCCAAAACGTCAACCCC +
Preference number: 1 (lower is better)
Translates to: AGLYIGHGFQLRVGQ*CQVRHGNSPQNVNP
Trigger: GGGGTTGACGTTTTGGGGGCTGTTTCCATGTCTGACTTGGCACCACTGCCCGACACGTAGCTGGAAACCATGACCTATATATAGGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 90 bp AAGAACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATaGTTTCCAGCTACGTGTCGGGCAGTGGTGCCAAGTCAGACATGG +
Preference number: 1 (lower is better)
Translates to: KNKRNAGQCRPIYRS*FPATCRAVVPSQTW
Trigger: CCATGTCTGACTTGGCACCACTGCCCGACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 90 bp CAAGACAAATATCATTCCCCTGCTCTGTGCAAAATGAGTGCTGGTTaGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAG +
Preference number: 1 (lower is better)
Translates to: QDKYHSPALCKMSAG*GSHTSLSYHLNTPK
Trigger: CTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACCAGCACTCATTTTGCACAGAGCAGGGGAATGATATTTGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR TCA 90 bp CAAACTGCCTCACGTTACCAACGTCAAATTGTTTTAGGTCGTAAGTaGGCTTCAACAATGAGAAGGTTGTATGGAGAACATGGAACTTGT +
Preference number: 1 (lower is better)
Translates to: QTASRYQRQIVLGRK*ASTMRRLYGEHGTC
Trigger: ACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTTGAAGCTCACTTACGACCTAAAACAATTTGACGTTGGTAACGTGAGGCAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR TCA 90 bp AAGTGGCTTCTGAGTTTGCCATCTCTTAGAAATGGTCTAATGACCTaGACTTTTAGGATTCCTTCAAAAGGAGGTAGGTACTGTTCTGAA +
Preference number: 1 (lower is better)
Translates to: KWLLSLPSLRNGLMT*TFRIPSKGGRYCSE
Trigger: TTCAGAACAGTACCTACCTCCTTTTGAAGGAATCCTAAAAGTTCAGGTCATTAGACCATTTCTAAGAGATGGCAAACTCAGAAGCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CAA 90 bp GGGGCATACGGAGGCCAGCCGTCCACAATGCCAGCAGCACTTCTCTaGACACCTGCCTGTGCTGGGTGCATAAAAGGAGCTAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: GAYGGQPSTMPAALL*TPACAGCIKGASHR
Trigger: CCTGTGGCTAGCTCCTTTTATGCACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGGCCTCCGTATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCCAGCAGCACTTCTCTTaGCACCTGCCTGTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPQQHFS*HLPVLG
Trigger: ACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTG...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGCCGATGGCTGGAGGATaGAGGAGATGCTTTAGATAT +
Preference number: 2 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVPMAGG*RRCFRY
Trigger: ATATCTAAAGCATCTCCTTCATCCTCCAGCCATCGG...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTACTGCGTGGCCACACTaGACGACTGGTGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCTAWPH*TTGGSW
Trigger: CCAGCTGCCACCAGTCGTTCAGTGTGGCCACGCAGT...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCAATACGCCCAAGCCCTaGCTTGTCCTAGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPNTPKP*LVLGEK
Trigger: CTTTTCACCTAGGACAAGGCAGGGCTTGGGCGTATT...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCTCTGTGCAAAATGAGTaGTGGTTGGGGCAGTCACAC +
Preference number: 2 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPSVQNE*WLGQSH
Trigger: GTGTGACTGCCCCAACCAGCACTCATTTTGCACAGA...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCCATTCCCCTGCTCTGTaGAAAATGAGTGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: GHHAQAQACCHHVVWHETHSPAL*KMSAGW
Trigger: CCAACCAGCACTCATTTTGCACAGAGCAGGGGAATG...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGCCATGTGGTCTGGCATaGGACCTCTCGGAAGACACA +
Preference number: 2 (lower is better)
Translates to: LGTQITTPENRGPESASRPCGLA*DLSEDT
Trigger: TGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGG...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCCCAGCCAACAAGCATTaGTATGGACACCATGCCCAG +
Preference number: 2 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLPANKH*YGHHAQ
Trigger: CTGGGCATGGTGTCCATAGCAATGCTTGTTGGCTGG...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACCCAGCCAACAAGCATTaGTATGGACACCATGCCCAG +
Preference number: 2 (lower is better)
Translates to: GTQITTPENRGPESASRNPANKH*YGHHAQ
Trigger: CTGGGCATGGTGTCCATAGCAATGCTTGTTGGCTGG...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGGGAGCTAGCCACAGGTaGGAATTCTTGGAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: LGTQITTPENRGPESASRGASHR*EFLELG
Trigger: CCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCC...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGTGTTCTGAATTGTGTTaGCCTTCAGGTCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMCSELC*PSGHRG
Trigger: CCCTCTGTGACCTGAAGGTCAACACAATTCAGAACA...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACGCCCAATGGCCTTCTTaGCAAGGGTTTCAGGTTTTG +
Preference number: 2 (lower is better)
Translates to: GTQITTPENRGPESASRNAQWPS*QGFQVL
Trigger: CAAAACCTGAAACCCTTGTCAAGAAGGCCATTGGGC...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGCTTGACACCTGCCTGTaGTGGGTGCATAAAAGGAGC +
Preference number: 2 (lower is better)
Translates to: LGTQITTPENRGPESASRLDTCL*WVHKRS
Trigger: GCTCCTTTTATGCACCCAGCACAGGCAGGTGTCAAG...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGCAGCAGCACTTCTCTTaGCACCTGCCTGTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEQQHFS*HLPVLG
Trigger: ACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTG...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGCTGCCCATGTTAAAGTaGCTTCTGAGTTTGCCATCT +
Preference number: 2 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMLPMLK*LLSLPS
Trigger: AGATGGCAAACTCAGAAGCCACTTTAACATGGGCAG...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGGTGCAAAATGAGTGCTaGTTGGGGCAGTCACACATC +
Preference number: 2 (lower is better)
Translates to: LGTQITTPENRGPESASRVQNEC*LGQSHI
Trigger: GATGTGTGACTGCCCCAACCAGCACTCATTTTGCAC...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTGGAGCTAGCCACAGGTaGGAATTCTTGGAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCGASHR*EFLELG
Trigger: CCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCC...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CAA 90 bp CCTGCTCTGTGCAAAATGAGTGCTGGTTGGGGCAGTCACACATCTTaGAGCTATCACTTAAATACGCCCAAGCCCTGCCTTGTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: PALCKMSAGWGSHTS*SYHLNTPKPCLVLG
Trigger: ACCTAGGACAAGGCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACCAGCACTCATTTTGCACAGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCTCAGGTCACAGAGGGTaGATTTATATGCTTGAAAGT +
Preference number: 2 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPSGHRG*IYMLES
Trigger: ACTTTCAAGCATATAAATTCACCCTCTGTGACCTGA...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGCCATGTGGTCTGGCATaGGACCTCTCGGAAGACACA +
Preference number: 2 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVPCGLA*DLSEDT
Trigger: TGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGG...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGCCTGCCTGTGCTGGGTaGATAAAAGGAGCTAGCCAC +
Preference number: 2 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEPACAG*IKGASH
Trigger: GTGGCTAGCTCCTTTTATGCACCCAGCACAGGCAGG...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTGGCACTGCCTCAAACTaGCTCACGTTACCAACGTCA +
Preference number: 2 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCGTASN*LTLPTS
Trigger: TGACGTTGGTAACGTGAGGCAGTTTGAGGCAGTGCC...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTGCACAAGCCGATGGCTaGAGGATGAAGGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCAQADG*RMKEML
Trigger: AAGCATCTCCTTCATCCTCCAGCCATCGGCTTGTGC...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAACTGCGTGGCCACACTaGACGACTGGTGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRTAWPH*TTGGSW
Trigger: CCAGCTGCCACCAGTCGTTCAGTGTGGCCACGCAGT...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGATACCAAAAACTCAAATaGCCATCTTATGCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: AGCIKGASHRWEFLELGGYQKLK*PSYARG
Trigger: TCCCCTGGCATAAGATGGGCATTTGAGTTTTTGGTA...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGCTTGACACCTGCCTGTaGTGGGTGCATAAAAGGAGC +
Preference number: 2 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVLDTCL*WVHKRS
Trigger: GCTCCTTTTATGCACCCAGCACAGGCAGGTGTCAAG...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCAAAATGAGTGCTGGTTaGGGCAGTCACACATCTTTG +
Preference number: 2 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSKMSAG*GSHTSL
Trigger: CAAAGATGTGTGACTGCCCCAACCAGCACTCATTTT...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTGTGCAAAATGAGTGCTaGTTGGGGCAGTCACACATC +
Preference number: 2 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCVQNEC*LGQSHI
Trigger: GATGTGTGACTGCCCCAACCAGCACTCATTTTGCAC...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACTGTCACCATGTGGTCTaGCATGAGACCTCTCGGAAG +
Preference number: 2 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDCHHVV*HETSRK
Trigger: CTTCCGAGAGGTCTCATGCCAGACCACATGGTGACA...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGCTGCCTTGTCCTAGGTaGAAAGACCTCACAGGACAT +
Preference number: 2 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVLPCPR*KDLTGH
Trigger: ATGTCCTGTGAGGTCTTTTCACCTAGGACAAGGCAG...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTTTGCTATGGACACCATaGCCAGGCTCAAGCCTGTTG +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPALLWTP*PGSSLL
Trigger: CAACAGGCTTGAGCCTGGGCATGGTGTCCATAGCAA...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGCCATCTCAGCTTACTaGAGCCTCCATCCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSAISAY*SLHPLG
Trigger: ACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGC...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCCTGCCCATGTTAAAGTaGCTTCTGAGTTTGCCATCT +
Preference number: 2 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCLPMLK*LLSLPS
Trigger: AGATGGCAAACTCAGAAGCCACTTTAACATGGGCAG...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCAATGGTCTAATGACCTaGACTTTTAGGATTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLNGLMT*TFRIPS
Trigger: TGAAGGAATCCTAAAAGTTCAGGTCATTAGACCATT...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCCAAATGCCCATCTTATaGCAGGGGAAGATTGTATTG +
Preference number: 2 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCQMPIL*QGKIVL
Trigger: CAATACAATCTTCCCCTGGCATAAGATGGGCATTTG...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTAATACGCCCAAGCCCTaGCTTGTCCTAGGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPANTPKP*LVLGEK
Trigger: CTTTTCACCTAGGACAAGGCAGGGCTTGGGCGTATT...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTTCTGTGCAAAATGAGTaGTGGTTGGGGCAGTCACAC +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPASVQNE*WLGQSH
Trigger: GTGTGACTGCCCCAACCAGCACTCATTTTGCACAGA...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACACAGGACATCTTCCATaGAGTAGCTGTCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDTGHLP*SSCQRK
Trigger: CTTCCTTTGACAGCTACTGCATGGAAGATGTCCTGT...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTCAAATATCATTCCCCTaGTCTGTGCAAAATGAGTGC +
Preference number: 2 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCQISFP*SVQNEC
Trigger: GCACTCATTTTGCACAGAGCAGGGGAATGATATTTG...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACTTCTCTTGACACCTaGCTGTGCTGGGTGCATAAA +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPATSLDT*LCWVHK
Trigger: TTTATGCACCCAGCACAGGCAGGTGTCAAGAGAAGT...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCATTGCTATGGACACCATaGCCAGGCTCAAGCCTGTTG +
Preference number: 2 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSLLWTP*PGSSLL
Trigger: CAACAGGCTTGAGCCTGGGCATGGTGTCCATAGCAA...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACCGGCCTCCCAAGAAGTaGTGGGATTGCAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYRPPKK*WDCRHE
Trigger: CTCATGCCTGCAATCCCAGCACTTCTTGGGAGGCCG...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAAAGAGGAGGCTAGCATaGGAGCAGGTGTGGTTCACC +
Preference number: 2 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRKRRLA*EQVWFT
Trigger: GGTGAACCACACCTGCTCCCATGCTAGCCTCCTCTT...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CAA 90 bp AAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTaGGACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAA +
Preference number: 2 (lower is better)
Translates to: KPTSIGKRLTPKRCE*DVSVVMAEHSAKIE
Trigger: TTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTCAGTGGTCATaGCAGAACATTCAGCTAAGA +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPATCQWS*QNIQLR
Trigger: TCTTAGCTGAATGTTCTGCCATGACCACTGACACGT...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTCAAATGCCCATCTTATaGCAGGGGAAGATTGTATTG +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAQMPIL*QGKIVL
Trigger: CAATACAATCTTCCCCTGGCATAAGATGGGCATTTG...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTTACCAAAAACTCAAATaGCCATCTTATGCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAYQKLK*PSYARG
Trigger: TCCCCTGGCATAAGATGGGCATTTGAGTTTTTGGTA...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGACATTCCCCTGCTCTGTaGAAAATGAGTGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRHSPAL*KMSAGW
Trigger: CCAACCAGCACTCATTTTGCACAGAGCAGGGGAATG...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATGCACAAGCCGATGGCTaGAGGATGAAGGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYAQADG*RMKEML
Trigger: AAGCATCTCCTTCATCCTCCAGCCATCGGCTTGTGC...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGACCGATGGCTGGAGGATaGAGGAGATGCTTTAGATAT +
Preference number: 2 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRPMAGG*RRCFRY
Trigger: ATATCTAAAGCATCTCCTTCATCCTCCAGCCATCGG...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGAATGGTCTAATGACCTaGACTTTTAGGATTCCTTCA +
Preference number: 2 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCENGLMT*TFRIPS
Trigger: TGAAGGAATCCTAAAAGTTCAGGTCATTAGACCATT...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGATCAGGTCACAGAGGGTaGATTTATATGCTTGAAAGT +
Preference number: 2 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRSGHRG*IYMLES
Trigger: ACTTTCAAGCATATAAATTCACCCTCTGTGACCTGA...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR GCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACCAAATATCATTCCCCTaGTCTGTGCAAAATGAGTGC +
Preference number: 2 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYQISFP*SVQNEC
Trigger: GCACTCATTTTGCACAGAGCAGGGGAATGATATTTG...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCCCAGCAGCACTTCTCTaGACACCTGCCTGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GHHAQAQACCHHVVWHETPAALL*TPACAG
Trigger: CCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGG...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 72 bp CATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTaGCATGAGACCTCTCGGAAGACACAAAAGTCCACG +
Preference number: 3 (lower is better)
Translates to: HAQAQACCHHVV*HETSRKTQKST
Trigger: CGTGGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR GCA 72 bp CCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTaGATAAAAGGAGCTAGCCACAGGTGGGAATTCTTG +
Preference number: 3 (lower is better)
Translates to: PAALLLTPACAG*IKGASHRWEFL
Trigger: CAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 72 bp GACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTaGTCTGGCATGAGACCTCTCGGAAGACACAAAAGT +
Preference number: 3 (lower is better)
Translates to: DTMPRLKPVVTM*SGMRPLGRHKS
Trigger: ACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 72 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATaGTTTCCAGCTACGTGTCGGGCAGTGGTGCCAAGT +
Preference number: 3 (lower is better)
Translates to: RNAGQCRPIYRS*FPATCRAVVPS
Trigger: ACTTGGCACCACTGCCCGACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGCAAAATGAGTGCTGGTaGGGGCAGTCACACATCTTT +
Preference number: 3 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMQNECW*GQSHIF
Trigger: AAAGATGTGTGACTGCCCCAACCAGCACTCATTTTG...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACCCAGCAGCACTTCTCTaGACACCTGCCTGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDPAALL*TPACAG
Trigger: CCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGG...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 72 bp ACTGGGGTAGGTGAGAAAAGGAAGAGGAGGCTAGCATaGGAGCAGGTGTGGTTCACCTGCCTTCTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: TGVGEKRKRRLA*EQVWFTCLLQK
Trigger: TTTTTGCAGAAGGCAGGTGAACCACACCTGCTCCCATGCTAGCCTCCTCTTCCTTTTCTCACCTACCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 72 bp TATATAGGTCATGGTTTCCAGCTACGTGTCGGGCAGTaGTGCCAAGTCAGACATGGAAACAGCCCCCAAAAC +
Preference number: 3 (lower is better)
Translates to: YIGHGFQLRVGQ*CQVRHGNSPQN
Trigger: GTTTTGGGGGCTGTTTCCATGTCTGACTTGGCACCACTGCCCGACACGTAGCTGGAAACCATGACCTATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGGTCAAACATGTTCTCTaGCTGCCCATGTTAAAGTGG +
Preference number: 3 (lower is better)
Translates to: CIKGASHRWEFLELGGGEVKHVL*LPMLKW
Trigger: CCACTTTAACATGGGCAGCAAGAGAACATGTTTGAC...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCTGTTTGATGATAATGTaGGGGGACTCAATAAGGAAA +
Preference number: 3 (lower is better)
Translates to: GHHAQAQACCHHVVWHETCLMIM*GDSIRK
Trigger: TTTCCTTATTGAGTCCCCCAACATTATCATCAAACA...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTCCAAAGAGATGTGAGTaGGACGTGTCAGTGGTCATG +
Preference number: 3 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCPKRCE*DVSVVM
Trigger: CATGACCACTGACACGTCCAACTCACATCTCTTTGG...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCGTCAAACATGTTCTCTaGCTGCCCATGTTAAAGTGG +
Preference number: 3 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCVKHVL*LPMLKW
Trigger: CCACTTTAACATGGGCAGCAAGAGAACATGTTTGAC...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR TCA 72 bp CACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTaGGTTGGACGTGTCAGTGGTCATGGCAGAACATTC +
Preference number: 3 (lower is better)
Translates to: HLDRKETDSKEM*VGRVSGHGRTF
Trigger: GAATGTTCTGCCATGACCACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTAAGTGGCTTCTGAGTTaGCCATCTCTTAGAAATGGT +
Preference number: 3 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAKWLLS*PSLRNG
Trigger: ACCATTTCTAAGAGATGGCAAACTCAGAAGCCACTT...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACTGTTTGATGATAATGTaGGGGGACTCAATAAGGAAA +
Preference number: 3 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDCLMIM*GDSIRK
Trigger: TTTCCTTATTGAGTCCCCCAACATTATCATCAAACA...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CCA 72 bp GTGAGCTTCAACAATGAGAAGGTTGTATGGAGAACATaGAACTTGTCTCTCAGAGCACAAAGAAATCACTGG +
Preference number: 3 (lower is better)
Translates to: VSFNNEKVVWRT*NLSLRAQRNHW
Trigger: CCAGTGATTTCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTTGAAGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCACAAGGGTTTCAGGTTTaGTTTTGGCTTTTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSQGFQV*FWLFGF
Trigger: AAACCCAAAAAGCCAAAACAAAACCTGAAACCCTTG...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR-3UTR CAA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACAAGTGGCTTCTGAGTTaGCCATCTCTTAGAAATGGT +
Preference number: 3 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYKWLLS*PSLRNG
Trigger: ACCATTTCTAAGAGATGGCAAACTCAGAAGCCACTT...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR TCA 72 bp TCACGTTACCAACGTCAAATTGTTTTAGGTCGTAAGTaGGCTTCAACAATGAGAAGGTTGTATGGAGAACAT +
Preference number: 3 (lower is better)
Translates to: SRYQRQIVLGRK*ASTMRRLYGEH
Trigger: ATGTTCTCCATACAACCTTCTCATTGTTGAAGCTCACTTACGACCTAAAACAATTTGACGTTGGTAACGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTGCGTGGCCACACTaGACGACTGGTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNTAWPH*TTGGSW
Trigger: CCAGCTGCCACCAGTCGTTCAGTGTGGCCACGCAGT...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCGTGGCTGCAGCTGCCTaGGTACCGTTTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPVAAAA*VPFSST
Trigger: GGTGGATGAAAACGGTACCCAGGCAGCTGCAGCCAC...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGAGCCTCCCGAGTAGCTaGGACTATAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVSLPSS*DYRCTP
Trigger: TGGTGTGCACCTATAGTCCCAGCTACTCGGGAGGCT...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGACGATCTGGAAGCCAGTaGGGGCTGTCCCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGRSGSQ*GLSPAK
Trigger: CTTAGCTGGGGACAGCCCTCACTGGCTTCCAGATCG...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACAGCTGTCTTCCAGGGTaGACCGGGGGAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNSCLPG*TGGRTG
Trigger: TCCTGTCCTTCCCCCGGTTCACCCTGGAAGACAGCT...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGCCCAGTGGCTGCAGCTaGCTGGGTACCGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMPSGCS*LGTVFI
Trigger: GATGAAAACGGTACCCAGGCAGCTGCAGCCACTGGG...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCAAGAGGAGGCTAGCATaGGAGCAGGTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPKRRLA*EQVWFT
Trigger: GGTGAACCACACCTGCTCCCATGCTAGCCTCCTCTT...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCCTACGTGTCGGGCAGTaGTGCCAAGTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: GHHAQAQACCHHVVWHETLRVGQ*CQVRHG
Trigger: TCCATGTCTGACTTGGCACCACTGCCCGACACGTAG...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAGCTGTCTTCCAGGGTaGACCGGGGGAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRSCLPG*TGGRTG
Trigger: TCCTGTCCTTCCCCCGGTTCACCCTGGAAGACAGCT...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACGCCATCTCAGCTTACTaGAGCCTCCATCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNAISAY*SLHPLG
Trigger: ACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGC...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACGTGGCTGCAGCTGCCTaGGTACCGTTTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNVAAAA*VPFSST
Trigger: GGTGGATGAAAACGGTACCCAGGCAGCTGCAGCCAC...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAGACAACAGCCCCAGTaGCTGCAGCTGCCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRRQQPQ*LQLPGY
Trigger: GTACCCAGGCAGCTGCAGCCACTGGGGCTGTTGTCT...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAAGGACAGCCACAAGGTaGGCCAAGGAAACTGAGCCG +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGRTATR*AKETEP
Trigger: CGGCTCAGTTTCCTTGGCCCACCTTGTGGCTGTCCT...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCGCCCAAAGTAGCAGCTaGCCAGTCCGCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLAQSSS*PVRSHC
Trigger: ACAATGAGAGCGGACTGGTCAGCTGCTACTTTGGGC...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGCAGCAGCACTTCTCTTaGCACCTGCCTGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGEQQHFS*HLPVLG
Trigger: ACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTG...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCGCCCAATGGCCTTCTTaGCAAGGGTTTCAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GHHAQAQACCHHVVWHETAQWPS*QGFQVL
Trigger: CAAAACCTGAAACCCTTGTCAAGAAGGCCATTGGGC...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCCCCAGTGGCTGCAGCTaGCTGGGTACCGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSPSGCS*LGTVFI
Trigger: GATGAAAACGGTACCCAGGCAGCTGCAGCCACTGGG...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGTTGCTATGGACACCATaGCCAGGCTCAAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMLLWTP*PGSSLL
Trigger: CAACAGGCTTGAGCCTGGGCATGGTGTCCATAGCAA...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCGTGCAAAATGAGTGCTaGTTGGGGCAGTCACACATC +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPVQNEC*LGQSHI
Trigger: GATGTGTGACTGCCCCAACCAGCACTCATTTTGCAC...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAAAGAGGAGGCTAGCATaGGAGCAGGTGTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGKRRLA*EQVWFT
Trigger: GGTGAACCACACCTGCTCCCATGCTAGCCTCCTCTT...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGAAGTCCTACAGCCTGTaGAAACTTATAAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVKSYSL*KLIRRG
Trigger: GCCTCTCCTTATAAGTTTTCACAGGCTGTAGGACTT...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGCCTTCACCTCCTCTATaGAGCCAATTCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMPSPPL*SQFCRG
Trigger: GCCTCTACAGAATTGGCTTCATAGAGGAGGTGAAGG...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGCTGCCTTGTCCTAGGTaGAAAGACCTCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMLPCPR*KDLTGH
Trigger: ATGTCCTGTGAGGTCTTTTCACCTAGGACAAGGCAG...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGACTTGACACCTGCCTGTaGTGGGTGCATAAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGLDTCL*WVHKRS
Trigger: GCTCCTTTTATGCACCCAGCACAGGCAGGTGTCAAG...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGCACTGCCTCAAACTaGCTCACGTTACCAACGTCA +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGGTASN*LTLPTS
Trigger: TGACGTTGGTAACGTGAGGCAGTTTGAGGCAGTGCC...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCAGAAATGCCGGGCAGTaGAGGCCTATATATAGGTCA +
Preference number: 4 (lower is better)
Translates to: GHHAQAQACCHHVVWHETRNAGQ*RPIYRS
Trigger: TGACCTATATATAGGCCTGCACTGCCCGGCATTTCT...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGCACAAGCCGATGGCTaGAGGATGAAGGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGAQADG*RMKEML
Trigger: AAGCATCTCCTTCATCCTCCAGCCATCGGCTTGTGC...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACGCACAAGCCGATGGCTaGAGGATGAAGGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNAQADG*RMKEML
Trigger: AAGCATCTCCTTCATCCTCCAGCCATCGGCTTGTGC...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCGGAGCTAGCCACAGGTaGGAATTCTTGGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSGASHR*EFLELG
Trigger: CCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCC...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGATGTCACCATGTGGTCTaGCATGAGACCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGCHHVV*HETSRK
Trigger: CTTCCGAGAGGTCTCATGCCAGACCACATGGTGACA...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCCAAAGAGATGTGAGTTaGACGTGTCAGTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPQRDVS*TCQWSW
Trigger: CCATGACCACTGACACGTCCAACTCACATCTCTTTG...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGACCTTCACCTCCTCTATaGAGCCAATTCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGPSPPL*SQFCRG
Trigger: GCCTCTACAGAATTGGCTTCATAGAGGAGGTGAAGG...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCCCATGTGGTCTGGCATaGGACCTCTCGGAAGACACA +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCPCGLA*DLSEDT
Trigger: TGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGG...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGAACAGCCCCAGTGGCTaGAGCTGCCTGGGTACCGTT +
Preference number: 4 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVNSPSG*SCLGTV
Trigger: AACGGTACCCAGGCAGCTGCAGCCACTGGGGCTGTT...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGTTGCTATGGACACCATaGCCAGGCTCAAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGELLWTP*PGSSLL
Trigger: CAACAGGCTTGAGCCTGGGCATGGTGTCCATAGCAA...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACAGACAACAGCCCCAGTaGCTGCAGCTGCCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDRQQPQ*LQLPGY
Trigger: GTACCCAGGCAGCTGCAGCCACTGGGGCTGTTGTCT...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGTGTCACCATGTGGTCTaGCATGAGACCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGECHHVV*HETSRK
Trigger: CTTCCGAGAGGTCTCATGCCAGACCACATGGTGACA...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCAGCCTCCCGAGTAGCTaGGACTATAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCSLPSS*DYRCTP
Trigger: TGGTGTGCACCTATAGTCCCAGCTACTCGGGAGGCT...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCACGTGTCAGTGGTCATaGCAGAACATTCAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPTCQWS*QNIQLR
Trigger: TCTTAGCTGAATGTTCTGCCATGACCACTGACACGT...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCTTTCCCATTTGGCCTTaGAGTAAACAGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: GHHAQAQACCHHVVWHETFPIWP*SKQHSP
Trigger: TGGTGAATGCTGTTTACTTCAAGGCCAAATGGGAAA...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACTGTTCTGAATTGTGTTaGCCTTCAGGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNCSELC*PSGHRG
Trigger: CCCTCTGTGACCTGAAGGTCAACACAATTCAGAACA...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCAGTGAGCTTCAACAATaGGAAGGTTGTATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPSELQQ*EGCMEN
Trigger: GTTCTCCATACAACCTTCTCATTGTTGAAGCTCACT...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGTCTGTGCAAAATGAGTaGTGGTTGGGGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGESVQNE*WLGQSH
Trigger: GTGTGACTGCCCCAACCAGCACTCATTTTGCACAGA...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGTCTGTGCAAAATGAGTaGTGGTTGGGGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRSVQNE*WLGQSH
Trigger: GTGTGACTGCCCCAACCAGCACTCATTTTGCACAGA...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAAGAAATGCCGGGCAGTaGAGGCCTATATATAGGTCA +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGRNAGQ*RPIYRS
Trigger: TGACCTATATATAGGCCTGCACTGCCCGGCATTTCT...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGGTGCCAAGTCAGACATaGAAACAGCCCCCAAAACGT +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRVPSQT*KQPPKR
Trigger: ACGTTTTGGGGGCTGTTTCCATGTCTGACTTGGCAC...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGATTTTACCTTGGGATTaGCATTCAACCCAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVILPWD*HSTQKL
Trigger: TAACTTCTGGGTTGAATGTCAATCCCAAGGTAAAAT...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGGCAAAATTTGGTGTTTaGTGTAACAAGAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVAKFGV*CNKRVH
Trigger: ATGGACTCTCTTGTTACAGCAAACACCAAATTTTGC...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCCTCATCAATCTGATGTaGACTGTCACTTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLLINLM*TVTSST
Trigger: GGTGCTAGAAGTGACAGTGCACATCAGATTGATGAG...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACCATTTCCAGGATCTGTaGCTTCACCTCCTCTATGAA +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNHFQDL*LHLLYE
Trigger: TTCATAGAGGAGGTGAAGGCACAGATCCTGGAAATG...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCCAAAGTACTAGACACTaGTCCCCTTTTAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLQSTRH*SPFKES
Trigger: GCTCTCCTTAAAAGGGGAGCAGTGTCTAGTACTTTG...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCAATACGCCCAAGCCCTaGCTTGTCCTAGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCNTPKP*LVLGEK
Trigger: CTTTTCACCTAGGACAAGGCAGGGCTTGGGCGTATT...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGCCTGCCTGTGCTGGGTaGATAAAAGGAGCTAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVPACAG*IKGASH
Trigger: GTGGCTAGCTCCTTTTATGCACCCAGCACAGGCAGG...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGACTTCTCTTGACACCTaGCTGTGCTGGGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRTSLDT*LCWVHK
Trigger: TTTATGCACCCAGCACAGGCAGGTGTCAAGAGAAGT...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTCGGCCTCCCAAGAAGTaGTGGGATTGCAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPARPPKK*WDCRHE
Trigger: CTCATGCCTGCAATCCCAGCACTTCTTGGGAGGCCG...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAAAACTTATAACGATCTaGAAGCCAGTGAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGKLITI*KPVRAV
Trigger: GACAGCCCTCACTGGCTTCCAGATCGTTATAAGTTT...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCGTGCAAAATGAGTGCTaGTTGGGGCAGTCACACATC +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCVQNEC*LGQSHI
Trigger: GATGTGTGACTGCCCCAACCAGCACTCATTTTGCAC...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGATGGGACATGCATTCTaGATAGGGCACTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRMGHAF*IGHCLK
Trigger: TTTGAGGCAGTGCCCTATCCAGAATGCATGTCCCAT...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCAGTACCTCATCAATCTaGTGTGCACTGTCACTTCTA +
Preference number: 4 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLSTSSI*CALSLL
Trigger: TAGAAGTGACAGTGCACATCAGATTGATGAGGTACT...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTGCCCAAAGTAGCAGCTaGCCAGTCCGCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAAQSSS*PVRSHC
Trigger: ACAATGAGAGCGGACTGGTCAGCTGCTACTTTGGGC...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCATTTTACCTTGGGATTaGCATTCAACCCAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPILPWD*HSTQKL
Trigger: TAACTTCTGGGTTGAATGTCAATCCCAAGGTAAAAT...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCAGGTTATCTTTAGAGTaGGATGGCAGCAGCACGAAC +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCRLSLE*DGSSTN
Trigger: GTTCGTGCTGCTGCCATCTCACTCTAAAGATAACCT...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCAATGGTCTAATGACCTaGACTTTTAGGATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GHHAQAQACCHHVVWHETNGLMT*TFRIPS
Trigger: TGAAGGAATCCTAAAAGTTCAGGTCATTAGACCATT...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTGACTCCAAAGAGATGTaGGTTGGACGTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCDSKEM*VGRVSG
Trigger: ACCACTGACACGTCCAACTCACATCTCTTTGGAGTC...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACGTTTTAGGTCGTAAGTaGGCTTCAACAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNVLGRK*ASTMRR
Trigger: CCTTCTCATTGTTGAAGCTCACTTACGACCTAAAAC...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAAAGGAGAGCAGACCCTaGCATAAAAGAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: AGCIKGASHRWEFLELGGKESRP*HKREWF
Trigger: AAACCATTCTCTTTTATGGCAGGGTCTGCTCTCCTT...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGCAAAGTACTAGACACTaGTCCCCTTTTAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGEQSTRH*SPFKES
Trigger: GCTCTCCTTAAAAGGGGAGCAGTGTCTAGTACTTTG...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTTTGACCCATGGGACATaGATTCTGGATAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCLTHGT*ILDRAL
Trigger: CAGTGCCCTATCCAGAATGCATGTCCCATGGGTCAA...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGCTGCCCATGTTAAAGTaGCTTCTGAGTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRLPMLK*LLSLPS
Trigger: AGATGGCAAACTCAGAAGCCACTTTAACATGGGCAG...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGCTGCCCATGTTAAAGTaGCTTCTGAGTTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGELPMLK*LLSLPS
Trigger: AGATGGCAAACTCAGAAGCCACTTTAACATGGGCAG...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTGTGCCAAGTCAGACATaGAAACAGCCCCCAAAACGT +
Preference number: 4 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCVPSQT*KQPPKR
Trigger: ACGTTTTGGGGGCTGTTTCCATGTCTGACTTGGCAC...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGCCTATATATAGGTCATaGTTTCCAGCTACGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRPIYRS*FPATCR
Trigger: CCGACACGTAGCTGGAAACCATGACCTATATATAGG...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCAAGTCCTACAGCCTGTaGAAACTTATAAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCKSYSL*KLIRRG
Trigger: GCCTCTCCTTATAAGTTTTCACAGGCTGTAGGACTT...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGACGATCTGGAAGCCAGTaGGGGCTGTCCCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRRSGSQ*GLSPAK
Trigger: CTTAGCTGGGGACAGCCCTCACTGGCTTCCAGATCG...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCAGTACCTCATCAATCTaGTGTGCACTGTCACTTCTA +
Preference number: 4 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSSTSSI*CALSLL
Trigger: TAGAAGTGACAGTGCACATCAGATTGATGAGGTACT...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACGTGTGTAATCAGTCTTaGTCCTGTCTAATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GTQITTPENRGPESASRNVCNQS*SCLIWR
Trigger: TCTCCAAATTAGACAGGATCAAGACTGATTACACAC...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGCAGCACGAACATGCTaGGCTTCCCCTTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSAARTC*ASPWCT
Trigger: GGTACACCAAGGGGAAGCTCAGCATGTTCGTGCTGC...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCACAGCAGCACTTCTCTTaGCACCTGCCTGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSQQHFS*HLPVLG
Trigger: ACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTG...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAAAGGACCCAGCCTGCTaGTCCAGAGGCTCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSKDPAC*SRGSVV
Trigger: AACGACAGAGCCTCTGGATCAGCAGGCTGGGTCCTT...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382768.2
CDS-3UTR GCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGCAAATGCCCATCTTATaGCAGGGGAAGATTGTATTG +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRQMPIL*QGKIVL
Trigger: CAATACAATCTTCCCCTGGCATAAGATGGGCATTTG...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCCAAATGCCCATCTTATaGCAGGGGAAGATTGTATTG +
Preference number: 4 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSQMPIL*QGKIVL
Trigger: CAATACAATCTTCCCCTGGCATAAGATGGGCATTTG...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGTACCAAAAACTCAAATaGCCATCTTATGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGEYQKLK*PSYARG
Trigger: TCCCCTGGCATAAGATGGGCATTTGAGTTTTTGGTA...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGCATTCCCCTGCTCTGTaGAAAATGAGTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVHSPAL*KMSAGW
Trigger: CCAACCAGCACTCATTTTGCACAGAGCAGGGGAATG...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGCATTCCCCTGCTCTGTaGAAAATGAGTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEHSPAL*KMSAGW
Trigger: CCAACCAGCACTCATTTTGCACAGAGCAGGGGAATG...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGCAAATATCATTCCCCTaGTCTGTGCAAAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGEQISFP*SVQNEC
Trigger: GCACTCATTTTGCACAGAGCAGGGGAATGATATTTG...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACTTCTGGATAGGGCACTaGCTCAAACTGCCTCACGTT +
Preference number: 4 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDFWIGH*LKLPHV
Trigger: AACGTGAGGCAGTTTGAGGCAGTGCCCTATCCAGAA...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCTCCACCGTGTTTTCATaGTCAAAGTATGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLSTVFS*SKYVSH
Trigger: ATGGGAAACATACTTTGACCATGAAAACACGGTGGA...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTCCTGTTGTCACCATGTaGTCTGGCATGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAPVVTM*SGMRPL
Trigger: GAGAGGTCTCATGCCAGACCACATGGTGACAACAGG...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACCAACAAGCATTGCTATaGACACCATGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDQQALL*TPCPGS
Trigger: TGAGCCTGGGCATGGTGTCCATAGCAATGCTTGTTG...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGTCTGGGAAAATTCGTTaGAGTGTAGTACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: CIKGASHRWEFLELGGGESGKIR*SVVPHQ
Trigger: TTGATGAGGTACTACACTTCAACGAATTTTCCCAGA...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAGCAGCACGAACATGCTaGGCTTCCCCTTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRAARTC*ASPWCT
Trigger: GGTACACCAAGGGGAAGCTCAGCATGTTCGTGCTGC...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGCCGATGGCTGGAGGATaGAGGAGATGCTTTAGATAT +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEPMAGG*RRCFRY
Trigger: ATATCTAAAGCATCTCCTTCATCCTCCAGCCATCGG...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTGTTCTGAATTGTGTTaGCCTTCAGGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCECSELC*PSGHRG
Trigger: CCCTCTGTGACCTGAAGGTCAACACAATTCAGAACA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTAACAGCCCCAGTGGCTaGAGCTGCCTGGGTACCGTT +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLNSPSG*SCLGTV
Trigger: AACGGTACCCAGGCAGCTGCAGCCACTGGGGCTGTT...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp ACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTGTCAGTGACTTCTCTTGACACCTaGCTGTGCTGGGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: TSIGKRLTPKRCELDVSVTSLDT*LCWVHK
Trigger: TTTATGCACCCAGCACAGGCAGGTGTCAAGAGAAGT...CACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTATCTTTAGAGTGAGATaGCAGCAGCACGAACATGCT +
Preference number: 4 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCIFRVR*QQHEHA
Trigger: AGCATGTTCGTGCTGCTGCCATCTCACTCTAAAGAT...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGGAGCTAGCCACAGGTaGGAATTCTTGGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSGASHR*EFLELG
Trigger: CCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCC...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTCAACAAGCATTGCTATaGACACCATGCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAQQALL*TPCPGS
Trigger: TGAGCCTGGGCATGGTGTCCATAGCAATGCTTGTTG...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTCCTATATATAGGTCATaGTTTCCAGCTACGTGTCGG +
Preference number: 4 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCPIYRS*FPATCR
Trigger: CCGACACGTAGCTGGAAACCATGACCTATATATAGG...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACCATACCAAGGGCAGCTaGGAGGCTCAGGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYHTKGS*EAQGRE
Trigger: TTCTCTCCCCTGAGCCTCTCAGCTGCCCTTGGTATG...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCGTGTGTAATCAGTCTTaGTCCTGTCTAATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCVCNQS*SCLIWR
Trigger: TCTCCAAATTAGACAGGATCAAGACTGATTACACAC...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAATGGTCTAATGACCTaGACTTTTAGGATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LGTQITTPENRGPESASRNGLMT*TFRIPS
Trigger: TGAAGGAATCCTAAAAGTTCAGGTCATTAGACCATT...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGACAGGACATCTTCCATaGAGTAGCTGTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCETGHLP*SSCQRK
Trigger: CTTCCTTTGACAGCTACTGCATGGAAGATGTCCTGT...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCACCAGCCAACAAGCATTaGTATGGACACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSPANKH*YGHHAQ
Trigger: CTGGGCATGGTGTCCATAGCAATGCTTGTTGGCTGG...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATCGGCCTCCCAAGAAGTaGTGGGATTGCAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYRPPKK*WDCRHE
Trigger: CTCATGCCTGCAATCCCAGCACTTCTTGGGAGGCCG...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTGCCATCTCAGCTTACTaGAGCCTCCATCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLAISAY*SLHPLG
Trigger: ACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGC...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGACGTGTCGGGCAGTGGTaGCAAGTCAGACATGGAAAC +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRRVGQW*QVRHGN
Trigger: GTTTCCATGTCTGACTTGGCACCACTGCCCGACACG...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGATCTTTAGAGTGAGATaGCAGCAGCACGAACATGCT +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEIFRVR*QQHEHA
Trigger: AGCATGTTCGTGCTGCTGCCATCTCACTCTAAAGAT...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCAAAAAGAGAAAAGGGTaGTTGGCATTAAACTCCACC +
Preference number: 4 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCKKRKG*LALNST
Trigger: GGTGGAGTTTAATGCCAACCACCCTTTTCTCTTTTT...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACAAAATGAGTGCTGGTTaGGGCAGTCACACATCTTTG +
Preference number: 4 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDKMSAG*GSHTSL
Trigger: CAAAGATGTGTGACTGCCCCAACCAGCACTCATTTT...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTCAAAGAGATGTGAGTTaGACGTGTCAGTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAQRDVS*TCQWSW
Trigger: CCATGACCACTGACACGTCCAACTCACATCTCTTTG...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATAGGACAGCCACAAGGTaGGCCAAGGAAACTGAGCCG +
Preference number: 4 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYRTATR*AKETEP
Trigger: CGGCTCAGTTTCCTTGGCCCACCTTGTGGCTGTCCT...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
3UTR CAA 72 bp TCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTaGGACGTGTCAGTGGTCATGGCAGAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: SIGKRLTPKRCE*DVSVVMAEHSA
Trigger: AGCTGAATGTTCTGCCATGACCACTGACACGTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACCCATGTGGTCTGGCATaGGACCTCTCGGAAGACACA +
Preference number: 4 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYPCGLA*DLSEDT
Trigger: TGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGG...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACAGGACATCTTCCATaGAGTAGCTGTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPATGHLP*SSCQRK
Trigger: CTTCCTTTGACAGCTACTGCATGGAAGATGTCCTGT...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTCCTGCCTGTGCTGGGTaGATAAAAGGAGCTAGCCAC +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLPACAG*IKGASH
Trigger: GTGGCTAGCTCCTTTTATGCACCCAGCACAGGCAGG...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTCGTGTCGGGCAGTGGTaGCAAGTCAGACATGGAAAC +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLRVGQW*QVRHGN
Trigger: GTTTCCATGTCTGACTTGGCACCACTGCCCGACACG...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATCTACGTGTCGGGCAGTaGTGCCAAGTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYLRVGQ*CQVRHG
Trigger: TCCATGTCTGACTTGGCACCACTGCCCGACACGTAG...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTCTGGGAAAATTCGTTaGAGTGTAGTACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCESGKIR*SVVPHQ
Trigger: TTGATGAGGTACTACACTTCAACGAATTTTCCCAGA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTTTTCCCATTTGGCCTTaGAGTAAACAGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAFPIWP*SKQHSP
Trigger: TGGTGAATGCTGTTTACTTCAAGGCCAAATGGGAAA...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAAGGTTATCTTTAGAGTaGGATGGCAGCAGCACGAAC +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSRLSLE*DGSSTN
Trigger: GTTCGTGCTGCTGCCATCTCACTCTAAAGATAACCT...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTCTTGTAAAATGGAATTaGGATCATAGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCLVKWN*DHSCLP
Trigger: TGGAAGACAGCTATGATCTCAATTCCATTTTACAAG...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCACCGATGGCTGGAGGATaGAGGAGATGCTTTAGATAT +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSPMAGG*RRCFRY
Trigger: ATATCTAAAGCATCTCCTTCATCCTCCAGCCATCGG...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTCAGGTCACAGAGGGTaGATTTATATGCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCESGHRG*IYMLES
Trigger: ACTTTCAAGCATATAAATTCACCCTCTGTGACCTGA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTGAACCACAGGGGACATaGAGTTTTTGGTTATCTGAA +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAEPQGT*SFWLSE
Trigger: TTCAGATAACCAAAAACTTCATGTCCCCTGTGGTTC...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATGGCACTGCCTCAAACTaGCTCACGTTACCAACGTCA +
Preference number: 4 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYGTASN*LTLPTS
Trigger: TGACGTTGGTAACGTGAGGCAGTTTGAGGCAGTGCC...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACGTACAAATTGGGACTTaGAGAGATTCCAGTAAGATC +
Preference number: 4 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDVQIGT*RDSSKI
Trigger: GATCTTACTGGAATCTCTCCAAGTCCCAATTTGTAC...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGAAAAAGAGAAAAGGGTaGTTGGCATTAAACTCCACC +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEKKRKG*LALNST
Trigger: GGTGGAGTTTAATGCCAACCACCCTTTTCTCTTTTT...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACCCTGTTGTCACCATGTaGTCTGGCATGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYPVVTM*SGMRPL
Trigger: GAGAGGTCTCATGCCAGACCACATGGTGACAACAGG...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTCTGCCTTGTCCTAGGTaGAAAGACCTCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLLPCPR*KDLTGH
Trigger: ATGTCCTGTGAGGTCTTTTCACCTAGGACAAGGCAG...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTGACTCCAAAGAGATGTaGGTTGGACGTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLDSKEM*VGRVSG
Trigger: ACCACTGACACGTCCAACTCACATCTCTTTGGAGTC...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACTTCTGGATAGGGCACTaGCTCAAACTGCCTCACGTT +
Preference number: 4 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYFWIGH*LKLPHV
Trigger: AACGTGAGGCAGTTTGAGGCAGTGCCCTATCCAGAA...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTGTACAAATTGGGACTTaGAGAGATTCCAGTAAGATC +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAVQIGT*RDSSKI
Trigger: GATCTTACTGGAATCTCTCCAAGTCCCAATTTGTAC...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAATGGGACATGCATTCTaGATAGGGCACTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRMGHAF*IGHCLK
Trigger: TTTGAGGCAGTGCCCTATCCAGAATGCATGTCCCAT...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGAACCACAGGGGACATaGAGTTTTTGGTTATCTGAA +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSEPQGT*SFWLSE
Trigger: TTCAGATAACCAAAAACTTCATGTCCCCTGTGGTTC...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTGCAAAATTTGGTGTTTaGTGTAACAAGAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPAAKFGV*CNKRVH
Trigger: ATGGACTCTCTTGTTACAGCAAACACCAAATTTTGC...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTCTTTGCTTTCATTCTaGGAAAATTCGTTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCESLLSF*ENSLKC
Trigger: ACACTTCAACGAATTTTCCCAGAATGAAAGCAAAGA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAAAAATGAGTGCTGGTTaGGGCAGTCACACATCTTTG +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRKMSAG*GSHTSL
Trigger: CAAAGATGTGTGACTGCCCCAACCAGCACTCATTTT...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCATCAGGTCACAGAGGGTaGATTTATATGCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSSGHRG*IYMLES
Trigger: ACTTTCAAGCATATAAATTCACCCTCTGTGACCTGA...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAGTTTTAGGTCGTAAGTaGGCTTCAACAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRVLGRK*ASTMRR
Trigger: CCTTCTCATTGTTGAAGCTCACTTACGACCTAAAAC...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATCTCATCAATCTGATGTaGACTGTCACTTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYLINLM*TVTSST
Trigger: GGTGCTAGAAGTGACAGTGCACATCAGATTGATGAG...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACAAACTTATAACGATCTaGAAGCCAGTGAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYKLITI*KPVRAV
Trigger: GACAGCCCTCACTGGCTTCCAGATCGTTATAAGTTT...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTTCTTTGCTTTCATTCTaGGAAAATTCGTTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPASLLSF*ENSLKC
Trigger: ACACTTCAACGAATTTTCCCAGAATGAAAGCAAAGA...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTACGTGTCAGTGGTCATaGCAGAACATTCAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLTCQWS*QNIQLR
Trigger: TCTTAGCTGAATGTTCTGCCATGACCACTGACACGT...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAGTTGTATGGAGAACATaGAACTTGTCTCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRVVWRT*NLSLRA
Trigger: TGCTCTGAGAGACAAGTTCCATGTTCTCCATACAAC...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTAGTGAGCTTCAACAATaGGAAGGTTGTATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LEDEGDALDITKNSNAHLSELQQ*EGCMEN
Trigger: GTTCTCCATACAACCTTCTCATTGTTGAAGCTCACT...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR GCA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATCAAATATCATTCCCCTaGTCTGTGCAAAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYQISFP*SVQNEC
Trigger: GCACTCATTTTGCACAGAGCAGGGGAATGATATTTG...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR TCA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGACTTGTAAAATGGAATTaGGATCATAGCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRLVKWN*DHSCLP
Trigger: TGGAAGACAGCTATGATCTCAATTCCATTTTACAAG...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGCCAGCAGCACTTCTCTaGACACCTGCCTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CIKGASHRWEFLELGGGEPAALL*TPACAG
Trigger: CCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGG...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGCCAAAGAGATGTGAGTaGGACGTGTCAGTGGTCATG +
Preference number: 5 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVPKRCE*DVSVVM
Trigger: CATGACCACTGACACGTCCAACTCACATCTCTTTGG...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGCCAGGCTCAAGCCTGTaGTCACCATGTGGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: CIKGASHRWEFLELGGGEPGSSL*SPCGLA
Trigger: TGCCAGACCACATGGTGACAACAGGCTTGAGCCTGG...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGTCTGTAGAGGCCTTTTaGCGTCATCATCTTCACACT +
Preference number: 5 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVSVEAF*RHHLHT
Trigger: AGTGTGAAGATGATGACGCAAAAAGGCCTCTACAGA...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACATGCTGAGCTTCCCCTaGGTGTACCTCATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GTQITTPENRGPESASRNMLSFP*VYLISR
Trigger: CCTGGAAATGAGGTACACCAAGGGGAAGCTCAGCAT...GTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGGTCAAACATGTTCTCTaGCTGCCCATGTTAAAGTGG +
Preference number: 5 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVVKHVL*LPMLKW
Trigger: CCACTTTAACATGGGCAGCAAGAGAACATGTTTGAC...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGAGACCAGTATTCCTGACAGATaGGGAATTCCTGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GHHAQAQACCHHVVWHETSIPDR*GIPALH
Trigger: ATGGAGAGCAGGAATTCCCAATCTGTCAGGAATACT...GGTCTCATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAACCAGTCCGCTCTCATaGTTTAAGGACCCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: AGCIKGASHRWEFLELGGTSPLS*FKDPAF
Trigger: AAAAGCTGGGTCCTTAAACAATGAGAGCGGACTGGT...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269491.6
CDS-3UTR CAA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGTTGATCCTGTCTAATTaGGAGAGAAGCTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMLILSN*ERSCPK
Trigger: CTTTGGGCAGCTTCTCTCCAAATTAGACAGGATCAA...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGCCAGAAGTTAATCTCTaGTCTGGATTTTTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVPEVNL*SGFFRV
Trigger: AACCCTGAAAAATCCAGACAAGAGATTAACTTCTGG...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CCAGCCGTCCACAATGCCAGCAGCACTTCTCTTGACACCTGCCTGTGCTGGGTGTTCCTTGATTTTACCTaGGGATTGACATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: PAVHNASSTSLDTCLCWVFLDFT*GLTFNP
Trigger: TGGGTTGAATGTCAATCCCAAGGTAAAATCAAGGAA...CACCCAGCACAGGCAGGTGTCAAGAGAAGTGCTGCTGGCATTGTGGACGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GGCGCCATCTCAGCTTACTGCAGCCTCCATCCCCTGGGTTCAAGTGATCTTCCCAAGTGGCTTCTGAGTTaGCCATCTCTTAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: GAISAYCSLHPLGSSDLPKWLLS*PSLRNG
Trigger: ACCATTTCTAAGAGATGGCAAACTCAGAAGCCACTT...GGGAAGATCACTTGAACCCAGGGGATGGAGGCTGCAGTAAGCTGAGATGGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCCAAAATGAGTGCTGGTaGGGGCAGTCACACATCTTT +
Preference number: 5 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSQNECW*GQSHIF
Trigger: AAAGATGTGTGACTGCCCCAACCAGCACTCATTTTG...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGATGGAGAACATGGAACTaGTCTCTCAGAGCACAAAGA +
Preference number: 5 (lower is better)
Translates to: AGCIKGASHRWEFLELGGWRTWN*SLRAQR
Trigger: TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCA...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGGTCAGCCAGCACTTTTaGTTTGTTGCTTTTCAGACA +
Preference number: 5 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMVSQHF*FVAFQT
Trigger: TGTCTGAAAAGCAACAAACAAAAAGTGCTGGCTGAC...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382768.2
CDS CCA 90 bp CCTTTCAAGCTCTTCCAGACCCTTCAGGTTATCTTTAGAGTGAGATaGCAGCAGCACGAACATGCTGAGCTTCCCCTTGGTGTACCTCAT +
Preference number: 5 (lower is better)
Translates to: PFKLFQTLQVIFRVR*QQHEHAELPLGVPH
Trigger: ATGAGGTACACCAAGGGGAAGCTCAGCATGTTCGTGCTGCTGCCATCTCACTCTAAAGATAACCTGAAGGGTCTGGAAGAGCTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS-3UTR CAA 90 bp GCTGGGTGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGACCAGCTTTTTGTTTGTaGCTTTTCAGACAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: AGCIKGASHRWEFLELGGPAFCL*LFRQGS
Trigger: TGACCCTTGTCTGAAAAGCAACAAACAAAAAGCTGG...TCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCACCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000269491.6
CDS-3UTR CAA 90 bp TGCATAAAAGGAGCTAGCCACAGGTGGGAATTCTTGGAGCTAGGGGGAGGAGAGTCTGTAGAGGCCTTTTaGCGTCATCATCTTCACACT +
Preference number: 5 (lower is better)
Translates to: CIKGASHRWEFLELGGGESVEAF*RHHLHT
Trigger: AGTGTGAAGATGATGACGCAAAAAGGCCTCTACAGA...CTCTCCTCCCCCTAGCTCCAAGAATTCCCACCTGTGGCTAGCTCCTTTTATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GCTATGGACACCATGCCCAGGCTCAAGCCTGTTGTCACCATGTGGTCTGGCATGTTTGACAAGTACAAATaGGGACTTGGAGAGATTCCA +
Preference number: 5 (lower is better)
Translates to: AMDTMPRLKPVVTMWSGMFDKYK*GLGEIP
Trigger: TGGAATCTCTCCAAGTCCCAATTTGTACTTGTCAAA...CATGCCAGACCACATGGTGACAACAGGCTTGAGCCTGGGCATGGTGTCCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS GCA 90 bp GAACATGCTGAGCTTCCCCTTGGTGTACCTCATTTCCAGGATCTGTaGCTTCACCTCCTCTATGAAGCCAATTCTGTAGAGGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: EHAELPLGVPHFQDL*LHLLYEANSVEAFL
Trigger: CAAAAAGGCCTCTACAGAATTGGCTTCATAGAGGAGGTGAAGGCACAGATCCTGGAAATGAGGTACACCAAGGGGAAGCTCAGCATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS-3UTR CAA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCCAAGGGTCAGGTTCTTaGCTTTCATTCTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSQGSGS*LSFWEN
Trigger: ATTTTCCCAGAATGAAAGCAAAGAACCTGACCCTTG...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCACCAGGCTCAAGCCTGTaGTCACCATGTGGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSPGSSL*SPCGLA
Trigger: TGCCAGACCACATGGTGACAACAGGCTTGAGCCTGG...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAACACTCCAAGGGTTTCAGGTTTaGTTTTGGCTTTTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LRLPHQRTEALSPRVGTLQGFQV*FWLFGF
Trigger: AAACCCAAAAAGCCAAAACAAAACCTGAAACCCTTG...GAGTGTTCCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS TCA 90 bp CCTTGGTGTACCTCATTTCCAGGATCTGTGCCTTCACCTCCTCTATaGAGCCAATTCTGTAGAGGCCTTTTTGCGTCATCATCTTCACAC +
Preference number: 5 (lower is better)
Translates to: PWCTSFPGSVPSPPL*SQFCRGLFASSSSH
Trigger: GTGTGAAGATGATGACGCAAAAAGGCCTCTACAGAATTGGCTTCATAGAGGAGGTGAAGGCACAGATCCTGGAAATGAGGTACACCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS-3UTR CAA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCTTCCTTGATTTTACCTaGGGATTGACATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSFLDFT*GLTFNP
Trigger: TGGGTTGAATGTCAATCCCAAGGTAAAATCAAGGAA...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGTTTGACAAGTACAAATaGGGACTTGGAGAGATTCCA +
Preference number: 5 (lower is better)
Translates to: LGTQITTPENRGPESASRFDKYK*GLGEIP
Trigger: TGGAATCTCTCCAAGTCCCAATTTGTACTTGTCAAA...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TTAGGAACTCAGATTACCACACCAGAGAACAGAGGCCCTGAGTCCGCGAGTAGGAGCACTTTTTGTTTGTaGCTTTTCAGACAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LGTQITTPENRGPESASRSTFCL*LFRQGS
Trigger: TGACCCTTGTCTGAAAAGCAACAAACAAAAAGTGCT...CCTACTCGCGGACTCAGGGCCTCTGTTCTCTGGTGTGGTAATCTGAGTTCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382768.2
CDS-3UTR CAA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGATCCTGTCTAATTaGGAGAGAAGCTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCELILSN*ERSCPK
Trigger: CTTTGGGCAGCTTCTCTCCAAATTAGACAGGATCAA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGAGTATTCCTGACAGATaGGGAATTCCTGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCESIPDR*GIPALH
Trigger: ATGGAGAGCAGGAATTCCCAATCTGTCAGGAATACT...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GCCTGTTGTCACCATGTGGTCTGGCATGAGACCTCTCGGAAGACACAAAAGTCCACCTCCACAAAGGTTTaGTGGATAATTTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: ACCHHVVWHETSRKTQKSTSTKV*WIIFDK
Trigger: CTTGTCAAAAATTATCCACAAAACCTTTGTGGAGGT...GGACTTTTGTGTCTTCCGAGAGGTCTCATGCCAGACCACATGGTGACAACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGGTCAAACATGTTCTCTaGCTGCCCATGTTAAAGTGG +
Preference number: 5 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEVKHVL*LPMLKW
Trigger: CCACTTTAACATGGGCAGCAAGAGAACATGTTTGAC...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTGGAGAACATGGAACTaGTCTCTCAGAGCACAAAGA +
Preference number: 5 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEWRTWN*SLRAQR
Trigger: TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GGTTGGGGCAGTCACACATCTTTGAGCTATCACTTAAATACGCCCAAGCCCTGCTCAACAATGAGAAGGTaGTATGGAGAACATGGAACT +
Preference number: 5 (lower is better)
Translates to: GWGSHTSLSYHLNTPKPCSTMRR*YGEHGT
Trigger: AGTTCCATGTTCTCCATACAACCTTCTCATTGTTGA...GCAGGGCTTGGGCGTATTTAAGTGATAGCTCAAAGATGTGTGACTGCCCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp AGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACGTGTTTCTGGGAAAATTCGTaGAAGTGTAGTACCTCATCA +
Preference number: 5 (lower is better)
Translates to: RNAGQCRPIYRSWFPATCFWENS*KCSTSS
Trigger: TGATGAGGTACTACACTTCAACGAATTTTCCCAGAA...ACACGTAGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGAATGCTGAGCTTCCCCTaGGTGTACCTCATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRMLSFP*VYLISR
Trigger: CCTGGAAATGAGGTACACCAAGGGGAAGCTCAGCAT...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTGGACAAGTGGCTTCTGAGTTaGCCATCTCTTAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: LKPTSIGKRLTPKRCELDKWLLS*PSLRNG
Trigger: ACCATTTCTAAGAGATGGCAAACTCAGAAGCCACTT...GTCCAACTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACACCAGTCCGCTCTCATaGTTTAAGGACCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYTSPLS*FKDPAC
Trigger: GCAGGCTGGGTCCTTAAACAATGAGAGCGGACTGGT...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382768.2
CDS-3UTR CAA 90 bp CAAGACCTGAAACCCACCTCGATAGGAAAGAGACTGACTCCAAAGAGATGTGAGTTCTGGGAAAATTCGTaGAAGTGTAGTACCTCATCA +
Preference number: 5 (lower is better)
Translates to: QDLKPTSIGKRLTPKRCEFWENS*KCSTSS
Trigger: TGATGAGGTACTACACTTCAACGAATTTTCCCAGAA...CTCACATCTCTTTGGAGTCAGTCTCTTTCCTATCGAGGTGGGTTTCAGGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACCCAAAGAGATGTGAGTaGGACGTGTCAGTGGTCATG +
Preference number: 5 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYPKRCE*DVSVVM
Trigger: CATGACCACTGACACGTCCAACTCACATCTCTTTGG...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp GACGTGTCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCACAAGGGTCAGGTTCTTaGCTTTCATTCTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: DVSVVMAEHSAKIEIRNSQGSGS*LSFWEN
Trigger: ATTTTCCCAGAATGAAAGCAAAGAACCTGACCCTTG...TGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGACACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp AACAAAAGAAATGCCGGGCAGTGCAGGCCTATATATAGGTCATGGTTTCCAGCTACCTCCACAAAGGTTTaGTGGATAATTTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: NKRNAGQCRPIYRSWFPATSTKV*WIIFDK
Trigger: CTTGTCAAAAATTATCCACAAAACCTTTGTGGAGGT...AGCTGGAAACCATGACCTATATATAGGCCTGCACTGCCCGGCATTTCTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTCAAAATGAGTGCTGGTaGGGGCAGTCACACATCTTT +
Preference number: 5 (lower is better)
Translates to: LEDEGDALDITKNSNAHLQNECW*GQSHIF
Trigger: AAAGATGTGTGACTGCCCCAACCAGCACTCATTTTG...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATGCATTAATAGCGTCCTaGCTGAAGAGTTCCTTGATT +
Preference number: 5 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYALIAS*LKSSLI
Trigger: AATCAAGGAACTCTTCAGCAAGGACGCTATTAATGC...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TCAGTGGTCATGGCAGAACATTCAGCTAAGATAGAAATTAGGAACTCAGATTACGCATTAATAGCGTCCTaGCTGAAGAGTTCCTTGATT +
Preference number: 5 (lower is better)
Translates to: SVVMAEHSAKIEIRNSDYALIAS*LKSSLI
Trigger: AATCAAGGAACTCTTCAGCAAGGACGCTATTAATGC...GTAATCTGAGTTCCTAATTTCTATCTTAGCTGAATGTTCTGCCATGACCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGACAAGGGTTTCAGGTTTaGTTTTGGCTTTTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRQGFQV*FWLFGF
Trigger: AAACCCAAAAAGCCAAAACAAAACCTGAAACCCTTG...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGATCAACAATGAGAAGGTaGTATGGAGAACATGGAACT +
Preference number: 5 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRSTMRR*YGEHGT
Trigger: AGTTCCATGTTCTCCATACAACCTTCTCATTGTTGA...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp TCTAAATCCACTAGCCACTTTCCTGGGTCAGTGTCAAAATCACAAGACAAATATCCAGAAGTTAATCTCTaGTCTGGATTTTTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: SKSTSHFPGSVSKSQDKYPEVNL*SGFFRV
Trigger: AACCCTGAAAAATCCAGACAAGAGATTAACTTCTGG...ATATTTGTCTTGTGATTTTGACACTGACCCAGGAAAGTGGCTAGTGGATTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp AACAATGAGAAGGTTGTATGGAGAACATGGAACTTGTCTCTCAGAGCACAAAGATGTTTGATGATAATGTaGGGGGACTCAATAAGGAAA +
Preference number: 5 (lower is better)
Translates to: NNEKVVWRTWNLSLRAQRCLMIM*GDSIRK
Trigger: TTTCCTTATTGAGTCCCCCAACATTATCATCAAACA...TCTTTGTGCTCTGAGAGACAAGTTCCATGTTCTCCATACAACCTTCTCATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS-3UTR CAA 90 bp CTGGAGGATGAAGGAGATGCTTTAGATATTACCAAAAACTCAAATGCCCATCTTTGTTTGATGATAATGTaGGGGGACTCAATAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LEDEGDALDITKNSNAHLCLMIM*GDSIRK
Trigger: TTTCCTTATTGAGTCCCCCAACATTATCATCAAACA...AAGATGGGCATTTGAGTTTTTGGTAATATCTAAAGCATCTCCTTCATCCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269491.6
ENST00000382768.2
CDS CCA 72 bp AAGATCGTAGTGACCTTTCCGAGACAACAGCCCCAGTaGCTGCAGCTGCCTGGGTACCGTTTTCATCCACCT +
Preference number: 6 (lower is better)
Translates to: KIVVTFPRQQPQ*LQLPGYRFHPP
Trigger: AGGTGGATGAAAACGGTACCCAGGCAGCTGCAGCCACTGGGGCTGTTGTCTCGGAAAGGTCACTACGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS CCA 72 bp CTCTTCCAGACCCTTCAGGTTATCTTTAGAGTGAGATaGCAGCAGCACGAACATGCTGAGCTTCCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: LFQTLQVIFRVR*QQHEHAELPLG
Trigger: ACCAAGGGGAAGCTCAGCATGTTCGTGCTGCTGCCATCTCACTCTAAAGATAACCTGAAGGGTCTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS TCA 72 bp TGTCTAATTTGGAGAGAAGCTGCCCAAAGTAGCAGCTaGCCAGTCCGCTCTCATTGTTTAAGGACCCAGCCT +
Preference number: 6 (lower is better)
Translates to: CLIWREAAQSSS*PVRSHCLRTQP
Trigger: AGGCTGGGTCCTTAAACAATGAGAGCGGACTGGTCAGCTGCTACTTTGGGCAGCTTCTCTCCAAATTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382768.2
CDS GCA 72 bp GAGCTTCCCCTTGGTGTACCTCATTTCCAGGATCTGTaGCTTCACCTCCTCTATGAAGCCAATTCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: ELPLGVPHFQDL*LHLLYEANSVE
Trigger: CTCTACAGAATTGGCTTCATAGAGGAGGTGAAGGCACAGATCCTGGAAATGAGGTACACCAAGGGGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS TCA 72 bp TGTCTAATTTGGAGAGAAGCTGCCCAAAGTAGCAGCTaGCCAGTCCGCTCTCATTGTTTAAGGACCCAGCTT +
Preference number: 6 (lower is better)
Translates to: CLIWREAAQSSS*PVRSHCLRTQL
Trigger: AAGCTGGGTCCTTAAACAATGAGAGCGGACTGGTCAGCTGCTACTTTGGGCAGCTTCTCTCCAAATTAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269491.6
CDS CAA 72 bp CCCTCCAGAGAGCTGTCAGCCAGCACTTTTTGTTTGTaGCTTTTCAGACAAGGGTCAGGTTCTTTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: PSRELSASTFCL*LFRQGSGSLLS
Trigger: TGAAAGCAAAGAACCTGACCCTTGTCTGAAAAGCAACAAACAAAAAGTGCTGGCTGACAGCTCTCTGGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382768.2
CDS CAA 72 bp GCCTGGGTACCGTTTTCATCCACCTCCACAAAGGTTTaGTGGATAATTTTTGACAAGTACAAATTGGGACTT +
Preference number: 6 (lower is better)
Translates to: AWVPFSSTSTKV*WIIFDKYKLGL
Trigger: AAGTCCCAATTTGTACTTGTCAAAAATTATCCACAAAACCTTTGTGGAGGTGGATGAAAACGGTACCCAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS CAA 90 bp TCCACCTCCACAAAGGTTTTGTGGATAATTTTTGACAAGTACAAATaGGGACTTGGAGAGATTCCAGTAAGATCAGCCCTCGTTTCATCA +
Preference number: 6 (lower is better)
Translates to: STSTKVLWIIFDKYK*GLGEIPVRSALVSS
Trigger: TGATGAAACGAGGGCTGATCTTACTGGAATCTCTCCAAGTCCCAATTTGTACTTGTCAAAAATTATCCACAAAACCTTTGTGGAGGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1
CDS CAA 72 bp ACAAAGGTTTTGTGGATAATTTTTGACAAGTACAAATaGGGACTTGGAGAGATTCCAGTAAGATCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: TKVLWIIFDKYK*GLGEIPVRSAL
Trigger: GAGGGCTGATCTTACTGGAATCTCTCCAAGTCCCAATTTGTACTTGTCAAAAATTATCCACAAAACCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269491.6
ENST00000382768.2
ENST00000680447.1