RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000123561

Ensembl transcript IDs: ENST00000327674.8, ENST00000372563.2, ENST00000487487.1

Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCTTCCTATGCTTTGGATAATAATGAATTACTCATTGACATTCTaGATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGT +
Preference number: 1 (lower is better)
Translates to: SLPMLWIIMNYSLTF*MLCHRIGLFHSQQS
Trigger: ACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATGTCAATGAGTAATTCATTATTATCCAAAGCATAGGAAGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR GCA 90 bp AACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATaGAAGTCCAAGCTCACATCAATCACACCAGGCTATATTATTTAT +
Preference number: 1 (lower is better)
Translates to: NKVQPGFNLHPIIRE*KSKLTSITPGYIIY
Trigger: ATAAATAATATAGCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR TCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGATTGTTTTATGTCCATTaGTCTTATTGGAGTACTGGG +
Preference number: 2 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRLFYVH*SYWSTG
Trigger: CCCAGTACTCCAATAAGATCAATGGACATAAAACAA...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR TCA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATACTCATTGACATTCTaGATGCTCTGCCATAGGATT +
Preference number: 2 (lower is better)
Translates to: LVGGNELACTGRGKVVEGYSLTF*MLCHRI
Trigger: AATCCTATGGCAGAGCATTCAGAATGTCAATGAGTA...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR GCA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATGCTGTATTGTCCCATaGTTGTTCAGTAACTTGTTC +
Preference number: 2 (lower is better)
Translates to: LVGGNELACTGRGKVVEGCCIVP*LFSNLF
Trigger: GAACAAGTTACTGAACAAGCATGGGACAATACAGCA...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACATACCAGTGTCAGATCTaGCAAGAACTCAGAGAATCC +
Preference number: 2 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTYQCQI*QELRES
Trigger: GGATTCTCTGAGTTCTTGCCAGATCTGACACTGGTA...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATATCCTACTTAAACAAGTaGGACAGGGGTGCTATATAT +
Preference number: 2 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGISYLNK*DRGAIY
Trigger: ATATATAGCACCCCTGTCCCACTTGTTTAAGTAGGA...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR GCA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATGGCAAGTTTATCTCTTaGTGTATTGTCCCATGCTTG +
Preference number: 2 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYGKFIS*CIVPCL
Trigger: CAAGCATGGGACAATACAGCAAGAGATAAACTTGCC...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CCA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAATATACATTGGCAAGGTaGAAGTATGTTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: NKWDRGAIYGKESDWDTEYTLAR*KYVFLG
Trigger: CCCCAAGAAAACATACTTCCACCTTGCCAATGTATA...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR TCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACATACTCATTGACATTCTaGATGCTCTGCCATAGGATT +
Preference number: 2 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTYSLTF*MLCHRI
Trigger: AATCCTATGGCAGAGCATTCAGAATGTCAATGAGTA...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR GCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAACCCATCATAAGGGAATaGAAGTCCAAGCTCACATCA +
Preference number: 2 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKPIIRE*KSKLTS
Trigger: TGATGTGAGCTTGGACTTGCATTCCCTTATGATGGG...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR GCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAATACGAAGACCTGACCTaGTTTTTAGCTATTCCCCAG +
Preference number: 2 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKYEDLT*FLAIPQ
Trigger: CTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTA...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAATGCTCTGCCATAGGATaGGCCTCTTCCACAGCCAAC +
Preference number: 3 (lower is better)
Translates to: NKWDRGAIYGKESDWDTECSAIG*ASSTAN
Trigger: GTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCACAGTGGGAAGGGGGTaGAGAAGTTCACATATAAGA +
Preference number: 3 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGTVGRG*RSSHIR
Trigger: TCTTATATGTGAACTTCTCAACCCCCTTCCCACTGT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR GCA 72 bp CAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATaGAAGTCCAAGCTCACATCAATCACACCAGGCTAT +
Preference number: 3 (lower is better)
Translates to: QPGFNLHPIIRE*KSKLTSITPGY
Trigger: ATAGCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCATTAGAGCAAATGAGTaGAGGGGTATTCTGACAAAG +
Preference number: 3 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGIRANE*RGILTK
Trigger: CTTTGTCAGAATACCCCTCAACTCATTTGCTCTAAT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACACTCCCAGCTTATACATaGGCAAGGTGGAAGTATGTT +
Preference number: 3 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTLPAYT*ARWKYV
Trigger: AACATACTTCCACCTTGCCAATGTATAAGCTGGGAG...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR GCA 72 bp TGGACAGGCAAGTTTATCTCTTGCTGTATTGTCCCATaGTTGTTCAGTAACTTGTTCAGTTGTCTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: WTGKFISCCIVP*LFSNLFSCLSL
Trigger: CAGACTGAGACAACTGAACAAGTTACTGAACAAGCATGGGACAATACAGCAAGAGATAAACTTGCCTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGAGAGCCTTCCTATGCTTaGGATAATAATGAATTACTC +
Preference number: 3 (lower is better)
Translates to: LVGGNELACTGRGKVVEGEPSYA*DNNELL
Trigger: GAGTAATTCATTATTATCCAAAGCATAGGAAGGCTC...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATATTAGAGCAAATGAGTaGAGGGGTATTCTGACAAAG +
Preference number: 3 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYIRANE*RGILTK
Trigger: CTTTGTCAGAATACCCCTCAACTCATTTGCTCTAAT...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR-3UTR CAA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAGAGCCTTCCTATGCTTaGGATAATAATGAATTACTC +
Preference number: 3 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKEPSYA*DNNELL
Trigger: GAGTAATTCATTATTATCCAAAGCATAGGAAGGCTC...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCGTGCTCATCAGGGGCTaGGCAGGGGTTTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CSAIGLASSTANKVQPGFVLIRG*AGVSLP
Trigger: AGGGAGAGAAACCCCTGCTCAGCCCCTGATGAGCAC...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327674.8
CDS-3UTR TCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGACATGGCAGCTTCCACTaGCTCCATCTGTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRHGSFH*LHLSLL
Trigger: AAGGAGGGACAGATGGAGTCAGTGGAAGCTGCCATG...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGATCTCAGTTTGGGTGCTaGAGCAGGCCCCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRSQFGC*SRPQRK
Trigger: TTTCCTTTGGGGCCTGCTGCAGCACCCAAACTGAGA...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGCAATCTCAGTTTGGGTaGTGCAGCAGGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKQSQFG*CSRPQR
Trigger: CCTTTGGGGCCTGCTGCAGCACCCAAACTGAGATTG...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTCCTGCTTGGCTaGAGAAATGTTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: CSAIGLASSTANKVQPGFNLLLG*RNVGEV
Trigger: GACTTCTCCAACATTTCTGCAGCCAAGCAGGAGATT...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGACCCTTTTCACCAATGTaGAGCACAGCCTTATGGGCA +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRPFSPM*STALWA
Trigger: TGCCCATAAGGCTGTGCTGCACATTGGTGAAAAGGG...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGACTGAGGGAGCTTAGTTaGATGAAACACTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRLRELS*MKHSLS
Trigger: GCTCAGGGAGTGTTTCATCCAACTAAGCTCCCTCAG...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327674.8
CDS-3UTR GCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTTCTCAGTTTGGGTGCTaGAGCAGGCCCCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTSQFGC*SRPQRK
Trigger: TTTCCTTTGGGGCCTGCTGCAGCACCCAAACTGAGA...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGAAGATGCTGGAAGCCATaGTGGATCTCTACCATTGGA +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRRCWKP*WISTIG
Trigger: TCCAATGGTAGAGATCCAGCATGGCTTCCAGCATCT...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCCAAGAACTTTGCCAGTaGTTTCAGATGCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: CSAIGLASSTANKVQPGFQELCQ*FQMLAN
Trigger: ATTGGCAAGCATCTGAAACCACTGGCAAAGTTCTTG...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCTGGGCACTTGAACAGTaGTGGTCTTGTCTATTAAGA +
Preference number: 4 (lower is better)
Translates to: CSAIGLASSTANKVQPGFWALEQ*WSCLLR
Trigger: TCTTAATAGACAAGACCACCACTGTTCAAGTGCCCA...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCCCATCTGTCCCTCCTTaGGAAGAACAAAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LHPIIRECKSKLTSITPGPSVPP*EEQRVP
Trigger: TGGCACTCTTTGTTCTTCCCAAGGAGGGACAGATGG...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCTACTTTGCCTTCAGGTaGTGCACAGTGGATTGTAGC +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGYFAFR*CTVDCS
Trigger: GCTACAATCCACTGTGCATCACCTGAAGGCAAAGTA...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATCATGGCAGCTTCCACTaGCTCCATCTGTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYHGSFH*LHLSLL
Trigger: AAGGAGGGACAGATGGAGTCAGTGGAAGCTGCCATG...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGAGGCAGGCTGTTACTTTaGCTTCAGGTGATGCACAGT +
Preference number: 4 (lower is better)
Translates to: LVGGNELACTGRGKVVEGGRLLL*LQVMHS
Trigger: ACTGTGCATCACCTGAAGGCAAAGTAACAGCCTGCC...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACACAATCTCAGTTTGGGTaGTGCAGCAGGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTQSQFG*CSRPQR
Trigger: CCTTTGGGGCCTGCTGCAGCACCCAAACTGAGATTG...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAGCCAGTGGTTTCAGATaGTTGCCAATGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIASGFR*LPMKRA
Trigger: TGCCCTCTTCATTGGCAAGCATCTGAAACCACTGGC...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGAACTTCAGGGACAGCTaGAGCTTCAGTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HSECSAIGLASSTANKVQNFRDS*SFSSLF
Trigger: GAAAAGGGAACTGAAGCTGCAGCTGTCCCTGAAGTT...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCCAAGTGGGACAGGGGTaGTATATATGGAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGQVGQG*YIWKGV
Trigger: GACTCCTTTCCATATATAGCACCCCTGTCCCACTTG...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGATTTGGTTGGGATGAATaGCAGGCTGTTACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRFGWDE*QAVTLP
Trigger: AGGCAAAGTAACAGCCTGCCATTCATCCCAACCAAA...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCCGTGCAATTAGCCAATaGCCTTTTTCCCAACTACGC +
Preference number: 4 (lower is better)
Translates to: LHPIIRECKSKLTSITPGRAISQ*PFSQLR
Trigger: GCGTAGTTGGGAAAAAGGCCATTGGCTAATTGCACG...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAGGCATTTGGTTGGGATaGATGGCAGGCTGTTACTTT +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGGIWLG*MAGCYF
Trigger: AAAGTAACAGCCTGCCATTCATCCCAACCAAATGCC...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTGGCATTTGGTTGGGATaGATGGCAGGCTGTTACTTT +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTGIWLG*MAGCYF
Trigger: AAAGTAACAGCCTGCCATTCATCCCAACCAAATGCC...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTAGATGCTGGAAGCCATaGTGGATCTCTACCATTGGA +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTRCWKP*WISTIG
Trigger: TCCAATGGTAGAGATCCAGCATGGCTTCCAGCATCT...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAAGTGAACAGATCAGATaGTGGAAGCCATGCTGGATC +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGSEQIR*WKPCWI
Trigger: GATCCAGCATGGCTTCCAGCATCTGATCTGTTCACT...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAAGTGAACAGATCAGATaGTGGAAGCCATGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGISEQIR*WKPCWI
Trigger: GATCCAGCATGGCTTCCAGCATCTGATCTGTTCACT...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAATCTCCTGCTTGGCTaGAGAAATGTTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGNLLLG*RNVGEV
Trigger: GACTTCTCCAACATTTCTGCAGCCAAGCAGGAGATT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCGTGCCAGAGCATTCTTaGTGTAGTCCATTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LHPIIRECKSKLTSITPGVPEHS*CSPFAE
Trigger: TTCTGCAAATGGACTACAGCAAGAATGCTCTGGCAC...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTAACTTCAGGGACAGCTaGAGCTTCAGTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTNFRDS*SFSSLF
Trigger: GAAAAGGGAACTGAAGCTGCAGCTGTCCCTGAAGTT...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGAGGCAAGTTTATCTCTTaGTGTATTGTCCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRGKFIS*CIVPCL
Trigger: CAAGCATGGGACAATACAGCAAGAGATAAACTTGCC...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGACAGATACAGGAATGGTaGCATTTTGGAAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRQIQEW*HFGRKL
Trigger: TAACTTCCTTCCAAAATGTCACCATTCCTGTATCTG...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATATCAGATGCTTGCCAATaGAGAGGGCATTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGISDACQ*RGHFLS
Trigger: AGATAGGAAATGCCCTCTTCATTGGCAAGCATCTGA...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAGTTTGCATCTCCACATaGCTGTTAATCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIVCIST*LLISCL
Trigger: CAAGCAGGAGATTAACAGTCATGTGGAGATGCAAAC...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAATATTTGATGATGTaGTCATCAGGGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGKYLMM*SSGAEQ
Trigger: CTGCTCAGCCCCTGATGAGCACATCATCAAATATTT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327674.8
CDS-3UTR GCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAGTGCCAGAGCATTCTTaGTGTAGTCCATTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIVPEHS*CSPFAE
Trigger: TTCTGCAAATGGACTACAGCAAGAATGCTCTGGCAC...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGACCCATCATAAGGGAATaGAAGTCCAAGCTCACATCA +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGPIIRE*KSKLTS
Trigger: TGATGTGAGCTTGGACTTGCATTCCCTTATGATGGG...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGATACGAAGACCTGACCTaGTTTTTAGCTATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGYEDLT*FLAIPQ
Trigger: CTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTA...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGTACGAAGACCTGACCTaGTTTTTAGCTATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKYEDLT*FLAIPQ
Trigger: CTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTA...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGATGCTGTATTGTCCCATaGTTGTTCAGTAACTTGTTC +
Preference number: 4 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRCCIVP*LFSNLF
Trigger: GAACAAGTTACTGAACAAGCATGGGACAATACAGCA...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGGGCAAGTTTATCTCTTaGTGTATTGTCCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: HSECSAIGLASSTANKVQGKFIS*CIVPCL
Trigger: CAAGCATGGGACAATACAGCAAGAGATAAACTTGCC...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGGAAGATGTTCTTATCTaGGGTCTCCACAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKEDVLI*GLHSEP
Trigger: AGGTTCACTGTGGAGACCCCAGATAAGAACATCTTC...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGCTGGATCTCTACCATTaGAGTGTCTGTGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKLDLYH*SVCEVE
Trigger: TTCAACCTCACAGACACTCCAATGGTAGAGATCCAG...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCGCACTTGAACAGTGGTaGTCTTGTCTATTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHPIIRECKSKLTSITPGALEQW*SCLLRS
Trigger: GCTTCTTAATAGACAAGACCACCACTGTTCAAGTGC...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGACCATCTTCAAAAGTGTaGCTCCAAGGTCATATGTGG +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGPSSKV*LQGHMW
Trigger: CCACATATGACCTTGGAGCCACACTTTTGAAGATGG...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
3UTR CAA 72 bp GGTGGGGTTGGACAGGCAAGTTTATCTCTTGCTGTATaGTCCCATGCTTGTTCAGTAACTTGTTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GGVGQASLSLAV*SHACSVTCSVV
Trigger: GACAACTGAACAAGTTACTGAACAAGCATGGGACAATACAGCAAGAGATAAACTTGCCTGTCCAACCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAGTTTGCATCTCCACATaGCTGTTAATCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NKWDRGAIYGKESDWDTEVCIST*LLISCL
Trigger: CAAGCAGGAGATTAACAGTCATGTGGAGATGCAAAC...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATTTGGCTTGAGGTCTTaGATTAGACCCACAACTTTC +
Preference number: 4 (lower is better)
Translates to: LVGGNELACTGRGKVVEGFGLRS*IRPTTF
Trigger: GAAAGTTGTGGGTCTAATTCAAGACCTCAAGCCAAA...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAAGTGTTTTCAGGCTaGTCCGAAAGTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGKVFSG*SESSTS
Trigger: TGAAGTTGAACTTTCGGATCAGCCTGAAAACACTTT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAAATAGGCATGCTGAATaGCCATCTTCAAAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGNRHAE*PSSKVW
Trigger: CCACACTTTTGAAGATGGGCATTCAGCATGCCTATT...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCTGCTGTATTGTCCCATaGTTGTTCAGTAACTTGTTC +
Preference number: 4 (lower is better)
Translates to: LHPIIRECKSKLTSITPGCCIVP*LFSNLF
Trigger: GAACAAGTTACTGAACAAGCATGGGACAATACAGCA...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAATTTGGTTGGGATGAATaGCAGGCTGTTACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: NKWDRGAIYGKESDWDTEFGWDE*QAVTLP
Trigger: AGGCAAAGTAACAGCCTGCCATTCATCCCAACCAAA...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCACATCTTGTAGAGAGTaGCATTTGGTTGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGTSCRE*HLVGMN
Trigger: ATTCATCCCAACCAAATGCCACTCTCTACAAGATGT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAACTGGATCTCTACCATTaGAGTGTCTGTGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: NKWDRGAIYGKESDWDTELDLYH*SVCEVE
Trigger: TTCAACCTCACAGACACTCCAATGGTAGAGATCCAG...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGGTCTTCTGTCTTGGATaGATCAAAAGGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKVFCLG*IKRICP
Trigger: TGGGCAAATCCTTTTGATCCATCCAAGACAGAAGAC...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGATGGGCACTTGAACAGTaGTGGTCTTGTCTATTAAGA +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGWALEQ*WSCLLR
Trigger: TCTTAATAGACAAGACCACCACTGTTCAAGTGCCCA...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTCCTTATGGGCAGCATTaGAAAGTTTCAGACCATTGT +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTPYGQH*KVSDHC
Trigger: ACAATGGTCTGAAACTTTCCAATGCTGCCCATAAGG...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATTGCAGCACAGCCTTATaGGCAGCATTGGAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYCSTAL*AALESF
Trigger: GAAACTTTCCAATGCTGCCCATAAGGCTGTGCTGCA...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAATACCAGTGTCAGATCTaGCAAGAACTCAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPEYQCQI*QELRES
Trigger: GGATTCTCTGAGTTCTTGCCAGATCTGACACTGGTA...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGTATACATTGGCAAGGTaGAAGTATGTTTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HSECSAIGLASSTANKVQYTLAR*KYVFLG
Trigger: CCCCAAGAAAACATACTTCCACCTTGCCAATGTATA...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATTCAGATGCTTGCCAATaGAGAGGGCATTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYSDACQ*RGHFLS
Trigger: AGATAGGAAATGCCCTCTTCATTGGCAAGCATCTGA...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGTCTCATAGAGGGTCTTaGCATCATTCAAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKSHRGS*HHSRTL
Trigger: CAAAGTTCTTGAATGATGTCAAGACCCTCTATGAGA...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAATTTGGCTTGAGGTCTTaGATTAGACCCACAACTTTC +
Preference number: 4 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPEFGLRS*IRPTTF
Trigger: GAAAGTTGTGGGTCTAATTCAAGACCTCAAGCCAAA...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAAAAGTGTTTTCAGGCTaGTCCGAAAGTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIKVFSG*SESSTS
Trigger: TGAAGTTGAACTTTCGGATCAGCCTGAAAACACTTT...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTTACTCATTGACATTCTaGATGCTCTGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTYSLTF*MLCHRI
Trigger: AATCCTATGGCAGAGCATTCAGAATGTCAATGAGTA...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGATACTCATTGACATTCTaGATGCTCTGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGYSLTF*MLCHRI
Trigger: AATCCTATGGCAGAGCATTCAGAATGTCAATGAGTA...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCTTGTTTTATGTCCATTaGTCTTATTGGAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: LHPIIRECKSKLTSITPGLFYVH*SYWSTG
Trigger: CCCAGTACTCCAATAAGATCAATGGACATAAAACAA...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGATCATTCAAGAACTTTaGCAGTGGTTTCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: HSECSAIGLASSTANKVQIIQEL*QWFQML
Trigger: AAGCATCTGAAACCACTGGCAAAGTTCTTGAATGAT...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATGGGAAGAACAAAGAGTaGCAGAGCATTCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYGKNKE*QSILAV
Trigger: TACAGCAAGAATGCTCTGGCACTCTTTGTTCTTCCC...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACACCCATCATAAGGGAATaGAAGTCCAAGCTCACATCA +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTPIIRE*KSKLTS
Trigger: TGATGTGAGCTTGGACTTGCATTCCCTTATGATGGG...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCATTACCACTCACTGTaGCATTTATACTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: HSECSAIGLASSTANKVQHYHSL*HLYSSF
Trigger: AAAGCTTGAGTATAAATGGCACAGTGAGTGGTAATG...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAACAAGAACTTTGCCAGTaGTTTCAGATGCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPEQELCQ*FQMLAN
Trigger: ATTGGCAAGCATCTGAAACCACTGGCAAAGTTCTTG...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAACTGTCTTCTGTCTTaGATGGATCAAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGNCLLS*MDQKDL
Trigger: CAAATCCTTTTGATCCATCCAAGACAGAAGACAGTT...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGTGTCTATTAAGAAGCTaGAACTGTCTTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKCLLRS*NCLLSW
Trigger: CCAAGACAGAAGACAGTTCCAGCTTCTTAATAGACA...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGATCCCAGCTTATACATTaGCAAGGTGGAAGTATGTTT +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGSQLIH*QGGSMF
Trigger: AAACATACTTCCACCTTGCCAATGTATAAGCTGGGA...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGATCCTACTTAAACAAGTaGGACAGGGGTGCTATATAT +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGSYLNK*DRGAIY
Trigger: ATATATAGCACCCCTGTCCCACTTGTTTAAGTAGGA...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCCTACTTAAACAAGTaGGACAGGGGTGCTATATAT +
Preference number: 4 (lower is better)
Translates to: LVGGNELACTGRGKVVEGSYLNK*DRGAIY
Trigger: ATATATAGCACCCCTGTCCCACTTGTTTAAGTAGGA...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGATCATTCAAGAACTTTaGCAGTGGTTTCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKIIQEL*QWFQML
Trigger: AAGCATCTGAAACCACTGGCAAAGTTCTTGAATGAT...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTAGAGAATACTCCTTGTaGTTCTCTCCAAAATCAACA +
Preference number: 4 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTREYSL*FSPKST
Trigger: TGTTGATTTTGGAGAGAAGCACAAGGAGTATTCTCT...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAAGAGAATACTCCTTGTaGTTCTCTCCAAAATCAACA +
Preference number: 4 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGREYSL*FSPKST
Trigger: TGTTGATTTTGGAGAGAAGCACAAGGAGTATTCTCT...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGCATTACCACTCACTGTaGCATTTATACTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKHYHSL*HLYSSF
Trigger: AAAGCTTGAGTATAAATGGCACAGTGAGTGGTAATG...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGCACTTGAACAGTGGTaGTCTTGTCTATTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTALEQW*SCLLRS
Trigger: GCTTCTTAATAGACAAGACCACCACTGTTCAAGTGC...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCATATGTGGCAGAAATaGAAAACTTTGGAACAAACA +
Preference number: 4 (lower is better)
Translates to: HSECSAIGLASSTANKVQHMWQK*KTLEQT
Trigger: TGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATG...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACACAGATACAGGAATGGTaGCATTTTGGAAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTQIQEW*HFGRKL
Trigger: TAACTTCCTTCCAAAATGTCACCATTCCTGTATCTG...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATTCTCATAGAGGGTCTTaGCATCATTCAAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYSHRGS*HHSRTL
Trigger: CAAAGTTCTTGAATGATGTCAAGACCCTCTATGAGA...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAGGCAGGCTGTTACTTTaGCTTCAGGTGATGCACAGT +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKGRLLL*LQVMHS
Trigger: ACTGTGCATCACCTGAAGGCAAAGTAACAGCCTGCC...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp GTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATGAGAATAGGCATGCTGAATaGCCATCTTCAAAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VLYMERSLIGIQKKRVYENRHAE*PSSKVW
Trigger: CCACACTTTTGAAGATGGGCATTCAGCATGCCTATT...CTCATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATGAGGTCTTCTGTCTTGGATaGATCAAAAGGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: VLYMERSLIGIQKKRVYEVFCLG*IKRICP
Trigger: TGGGCAAATCCTTTTGATCCATCCAAGACAGAAGAC...CTCATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAAAACTGTCTTCTGTCTTaGATGGATCAAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPENCLLS*MDQKDL
Trigger: CAAATCCTTTTGATCCATCCAAGACAGAAGACAGTT...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACATGTCTATTAAGAAGCTaGAACTGTCTTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTCLLRS*NCLLSW
Trigger: CCAAGACAGAAGACAGTTCCAGCTTCTTAATAGACA...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAACCATCTGTCCCTCCTTaGGAAGAACAAAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKPSVPP*EEQRVP
Trigger: TGGCACTCTTTGTTCTTCCCAAGGAGGGACAGATGG...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGACATATGTGGCAGAAATaGAAAACTTTGGAACAAACA +
Preference number: 4 (lower is better)
Translates to: LVGGNELACTGRGKVVEGHMWQK*KTLEQT
Trigger: TGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATG...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp GTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATGAGCCTTATGGGCAGCATTaGAAAGTTTCAGACCATTGT +
Preference number: 4 (lower is better)
Translates to: VLYMERSLIGIQKKRVYEPYGQH*KVSDHC
Trigger: ACAATGGTCTGAAACTTTCCAATGCTGCCCATAAGG...CTCATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACATCCCAGCTTATACATTaGCAAGGTGGAAGTATGTTT +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTSQLIH*QGGSMF
Trigger: AAACATACTTCCACCTTGCCAATGTATAAGCTGGGA...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACATTGTTTTATGTCCATTaGTCTTATTGGAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTLFYVH*SYWSTG
Trigger: CCCAGTACTCCAATAAGATCAATGGACATAAAACAA...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR GCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAACAAGTGGGACAGGGGTaGTATATATGGAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKQVGQG*YIWKGV
Trigger: GACTCCTTTCCATATATAGCACCCCTGTCCCACTTG...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR TCA 90 bp GTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATGAGTTAATCTATAAGAGATaGAGTGAGACAACCACTGAG +
Preference number: 4 (lower is better)
Translates to: VLYMERSLIGIQKKRVYELIYKR*SETTTE
Trigger: CTCAGTGGTTGTCTCACTTCATCTCTTATAGATTAA...CTCATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327674.8
CDS-3UTR CCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAGAAGATGTTCTTATCTaGGGTCTCCACAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKEDVLI*GLHSEP
Trigger: AGGTTCACTGTGGAGACCCCAGATAAGAACATCTTC...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAACCATCTTCAAAAGTGTaGCTCCAAGGTCATATGTGG +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKPSSKV*LQGHMW
Trigger: CCACATATGACCTTGGAGCCACACTTTTGAAGATGG...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAATACCAGTGTCAGATCTaGCAAGAACTCAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKYQCQI*QELRES
Trigger: GGATTCTCTGAGTTCTTGCCAGATCTGACACTGGTA...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CCA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAACATCTTGTAGAGAGTaGCATTTGGTTGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKTSCRE*HLVGMN
Trigger: ATTCATCCCAACCAAATGCCACTCTCTACAAGATGT...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCCTCCACAATCTCAGTTaGGGTGCTGCAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: CSAIGLASSTANKVQPGFLHNLS*GAAAGP
Trigger: GGGGCCTGCTGCAGCACCCAAACTGAGATTGTGGAG...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCTGTAGAGAGTGGCATTaGGTTGGGATGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: CSAIGLASSTANKVQPGFCREWH*VGMNGR
Trigger: CCTGCCATTCATCCCAACCAAATGCCACTCTCTACA...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGCTCCACAATCTCAGTTaGGGTGCTGCAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKLHNLS*GAAAGP
Trigger: GGGGCCTGCTGCAGCACCCAAACTGAGATTGTGGAG...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGAGGAGTGTCTGTGAGGTaGAACCCCAAGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRGVSVR*NPKVST
Trigger: TGTGGAGACCTTGGGGTTCAACCTCACAGACACTCC...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGGGAGTGTCTGTGAGGTaGAACCCCAAGGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: HSECSAIGLASSTANKVQGVSVR*NPKVST
Trigger: TGTGGAGACCTTGGGGTTCAACCTCACAGACACTCC...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGTGCTCTGCCATAGGATaGGCCTCTTCCACAGCCAAC +
Preference number: 5 (lower is better)
Translates to: HSECSAIGLASSTANKVQCSAIG*ASSTAN
Trigger: GTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGTGGCAGGCTGTTACTTaGCCTTCAGGTGATGCACAG +
Preference number: 5 (lower is better)
Translates to: HSECSAIGLASSTANKVQWQAVT*PSGDAQ
Trigger: CTGTGCATCACCTGAAGGCAAAGTAACAGCCTGCCA...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCCAGGGTTCACAGTGGGAAGGGGGTaGAGAAGTTCACATATAAGA +
Preference number: 5 (lower is better)
Translates to: CSAIGLASSTANKVQPGFTVGRG*RSSHIR
Trigger: TCTTATATGTGAACTTCTCAACCCCCTTCCCACTGT...GAACCCTGGCTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGACAGGTAGAGGGAAGGTaGTTGAAGGATCTGGGGATA +
Preference number: 5 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRQVEGR*LKDLGI
Trigger: TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTG...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGTGTAGAGAGTGGCATTaGGTTGGGATGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: HSECSAIGLASSTANKVQCREWH*VGMNGR
Trigger: CCTGCCATTCATCCCAACCAAATGCCACTCTCTACA...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGAGTGCATCATGGGCACTaGAACAGTGGTGGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LVGGNELACTGRGKVVEGVHHGH*NSGGLV
Trigger: GACAAGACCACCACTGTTCAAGTGCCCATGATGCAC...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAATGGCAGGCTGTTACTTaGCCTTCAGGTGATGCACAG +
Preference number: 5 (lower is better)
Translates to: NKWDRGAIYGKESDWDTEWQAVT*PSGDAQ
Trigger: CTGTGCATCACCTGAAGGCAAAGTAACAGCCTGCCA...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGATTGGCTGCAGAAATGTaGGAGAAGTCGGTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRLAAEM*EKSVEK
Trigger: CTTTTCTACCGACTTCTCCAACATTTCTGCAGCCAA...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCGCCTTATGGGCAGCATaGGAAAGTTTCAGACCATTG +
Preference number: 5 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGALWAA*ESFRPL
Trigger: CAATGGTCTGAAACTTTCCAATGCTGCCCATAAGGC...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGACCAACTACGCTTCCGTaGGGTTCACAACTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: LVGGNELACTGRGKVVEGPTTLP*GSQLSL
Trigger: TAGGGAAAGTTGTGAACCCAACGGAAGCGTAGTTGG...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATACCAACTACGCTTCCGTaGGGTTCACAACTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIPTTLP*GSQLSL
Trigger: TAGGGAAAGTTGTGAACCCAACGGAAGCGTAGTTGG...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATTGCTCTGCCATAGGATaGGCCTCTTCCACAGCCAAC +
Preference number: 5 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYCSAIG*ASSTAN
Trigger: GTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCA...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp ACTCATCCCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCGTAGAGGGAAGGTTGTaGAAGGATCTGGGGATACAA +
Preference number: 5 (lower is better)
Translates to: THPHSGSSFIQPTSVRSGVEGRL*KDLGIQ
Trigger: TTGTATCCCCAGATCCTTCAACAACCTTCCCTCTAC...GCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGGGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGCAGGTAGAGGGAAGGTaGTTGAAGGATCTGGGGATA +
Preference number: 5 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKQVEGR*LKDLGI
Trigger: TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTG...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAGTAGGTGGTAATGAGTaGGCATGTACAGGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIVGGNE*ACTGRG
Trigger: CCCTCTACCTGTACATGCCAACTCATTACCACCTAC...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGAGTAGGTGGTAATGAGTaGGCATGTACAGGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: LVGGNELACTGRGKVVEGVGGNE*ACTGRG
Trigger: CCCTCTACCTGTACATGCCAACTCATTACCACCTAC...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGAAACTTTCCCTTTGGTTaGCATCTCCACATGACTGTT +
Preference number: 5 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRNFPFG*HLHMTV
Trigger: AACAGTCATGTGGAGATGCAAACCAAAGGGAAAGTT...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATTCCATCTGTCCCTCCTaGGGAAGAACAAAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYSICPS*GRTKSA
Trigger: GGCACTCTTTGTTCTTCCCAAGGAGGGACAGATGGA...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACATCCATCTGTCCCTCCTaGGGAAGAACAAAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTSICPS*GRTKSA
Trigger: GGCACTCTTTGTTCTTCCCAAGGAGGGACAGATGGA...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CTTCATCCCATCATAAGGGAATGCAAGTCCAAGCTCACATCAATCACACCAGGCACAGTGGGAAGGGGGTaGAGAAGTTCACATATAAGA +
Preference number: 5 (lower is better)
Translates to: LHPIIRECKSKLTSITPGTVGRG*RSSHIR
Trigger: TCTTATATGTGAACTTCTCAACCCCCTTCCCACTGT...GCCTGGTGTGATTGATGTGAGCTTGGACTTGCATTCCCTTATGATGGGATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGCTCCCAGCTTATACATaGGCAAGGTGGAAGTATGTT +
Preference number: 5 (lower is better)
Translates to: HSECSAIGLASSTANKVQLPAYT*ARWKYV
Trigger: AACATACTTCCACCTTGCCAATGTATAAGCTGGGAG...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 90 bp GCATCATGGGCACTTGAACAGTGGTGGTCTTGTCTATTAAGAAGCTaGAACTGTCTTCTGTCTTGGATGGATCAAAAGGATTTGCCCACT +
Preference number: 5 (lower is better)
Translates to: ASWALEQWWSCLLRS*NCLLSWMDQKDLPT
Trigger: AGTGGGCAAATCCTTTTGATCCATCCAAGACAGAAGACAGTTCCAGCTTCTTAATAGACAAGACCACCACTGTTCAAGTGCCCATGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGATTGGCTGCAGAAATGTaGGAGAAGTCGGTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGLAAEM*EKSVEK
Trigger: CTTTTCTACCGACTTCTCCAACATTTCTGCAGCCAA...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATACTTGCTGTAGTCCATTaGCAGAACTGTGCAGTTCAA +
Preference number: 5 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGILAVVH*QNCAVQ
Trigger: TTGAACTGCACAGTTCTGCAAATGGACTACAGCAAG...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATGCAAGGAAAGTTTCAGACCATaGTCCTCTGTGAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: ANKVQPGFNLHPIIRECKESFRP*SSVSPE
Trigger: TTCTGGACTCACAGAGGACAATGGTCTGAAACTTTC...CTTGCATTCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAAGCCTTATGGGCAGCATaGGAAAGTTTCAGACCATTG +
Preference number: 5 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPEALWAA*ESFRPL
Trigger: CAATGGTCTGAAACTTTCCAATGCTGCCCATAAGGC...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TCTGGCAAGAACTCAGAGAATCCTACTAATGGGACAGTGGGAAGGGGGTTGAGATTATCTCTTGCTGTATaGTCCCATGCTTGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: SGKNSENPTNGTVGRGLRLSLAV*SHACSV
Trigger: TACTGAACAAGCATGGGACAATACAGCAAGAGATAA...TCTCAACCCCCTTCCCACTGTCCCATTAGTAGGATTCTCTGAGTTCTTGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS TCA 90 bp GATCTATCAATTTGGATAATAGGGTGTAGGAAAGTGTTTTCAGGCTaGTCCGAAAGTTCAACTTCAGGGACAGCTGCAGCTTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: DLSIWIIGCRKVFSG*SESSTSGTAAASVP
Trigger: GGGAACTGAAGCTGCAGCTGTCCCTGAAGTTGAACTTTCGGATCAGCCTGAAAACACTTTCCTACACCCTATTATCCAAATTGATAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 90 bp CATGCTGAATGCCCATCTTCAAAAGTGTGGCTCCAAGGTCATATGTaGCAGAAATGGAAAACTTTGGAACAAACAAGTCAACCCATCCCT +
Preference number: 5 (lower is better)
Translates to: HAECPSSKVWLQGHM*QKWKTLEQTSQPIP
Trigger: AGGGATGGGTTGACTTGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATGACCTTGGAGCCACACTTTTGAAGATGGGCATTCAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327674.8
ENST00000372563.2
ENST00000487487.1
CDS-3UTR CAA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATAGGGGTTTCTCTCCCTaGAAAAACAGGAGATGCATC +
Preference number: 5 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYRGFSP*KNRRCI
Trigger: GATGCATCTCCTGTTTTTCAAGGGAGAGAAACCCCT...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327674.8
CDS-3UTR CAA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAGTGGTTTCAGATGCTaGCCAATGAAGAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: NKWDRGAIYGKESDWDTESGFRC*PMKRAF
Trigger: AAATGCCCTCTTCATTGGCAAGCATCTGAAACCACT...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAAGAAAGTTTCAGACCATaGTCCTCTGTGAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPEESFRP*SSVSPE
Trigger: TTCTGGACTCACAGAGGACAATGGTCTGAAACTTTC...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAACTCCCAGCTTATACATaGGCAAGGTGGAAGTATGTT +
Preference number: 5 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPELPAYT*ARWKYV
Trigger: AACATACTTCCACCTTGCCAATGTATAAGCTGGGAG...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGTAGAGGGAAGGTTGTaGAAGGATCTGGGGATACAA +
Preference number: 5 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTVEGRL*KDLGIQ
Trigger: TTGTATCCCCAGATCCTTCAACAACCTTCCCTCTAC...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 90 bp ATTCCATATCCACTAGGTGATAGTATTGTTCCATCTGGTGCATCATaGGCACTTGAACAGTGGTGGTCTTGTCTATTAAGAAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: IPYPLGDSIVPSGAS*ALEQWWSCLLRSWN
Trigger: GTTCCAGCTTCTTAATAGACAAGACCACCACTGTTCAAGTGCCCATGATGCACCAGATGGAACAATACTATCACCTAGTGGATATGGAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 90 bp TGCCCATCTTCAAAAGTGTGGCTCCAAGGTCATATGTGGCAGAAATaGAAAACTTTGGAACAAACAAGTCAACCCATCCCTTCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: CPSSKVWLQGHMWQK*KTLEQTSQPIPSVV
Trigger: TACTACAGAAGGGATGGGTTGACTTGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATGACCTTGGAGCCACACTTTTGAAGATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327674.8
ENST00000372563.2
ENST00000487487.1
CDS-3UTR CAA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAAAACTTTCCCTTTGGTTaGCATCTCCACATGACTGTT +
Preference number: 5 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPENFPFG*HLHMTV
Trigger: AACAGTCATGTGGAGATGCAAACCAAAGGGAAAGTT...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGAGAACTGTCTTCTGTCTaGGATGGATCAAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: LVGGNELACTGRGKVVEGELSSV*DGSKGF
Trigger: AAATCCTTTTGATCCATCCAAGACAGAAGACAGTTC...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATCTGGGGATAGAACTGTCTTCTGTCTaGGATGGATCAAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: VMSWHVQVEGRLLKDLGIELSSV*DGSKGF
Trigger: AAATCCTTTTGATCCATCCAAGACAGAAGACAGTTC...TATCCCCAGATCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACACTTGCTGTAGTCCATTaGCAGAACTGTGCAGTTCAA +
Preference number: 5 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTLAVVH*QNCAVQ
Trigger: TTGAACTGCACAGTTCTGCAAATGGACTACAGCAAG...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAGAAAGAGAATACTCCTaGTGCTTCTCTCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGEREYS*CFSPKS
Trigger: TGATTTTGGAGAGAAGCACAAGGAGTATTCTCTTTC...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CATTCTGAATGCTCTGCCATAGGATTGGCCTCTTCCACAGCCAACAAAGTTCAGGAGCCTTCCTATGCTTaGGATAATAATGAATTACTC +
Preference number: 5 (lower is better)
Translates to: HSECSAIGLASSTANKVQEPSYA*DNNELL
Trigger: GAGTAATTCATTATTATCCAAAGCATAGGAAGGCTC...CTGAACTTTGTTGGCTGTGGAAGAGGCCAATCCTATGGCAGAGCATTCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTCCACAGCCAACAAAGTTCAGCCAGGGTTCAATCTTCATCCCATCATAAGGGAATTAGAGCAAATGAGTaGAGGGGTATTCTGACAAAG +
Preference number: 5 (lower is better)
Translates to: FHSQQSSARVQSSSHHKGIRANE*RGILTK
Trigger: CTTTGTCAGAATACCCCTCAACTCATTTGCTCTAAT...TCCCTTATGATGGGATGAAGATTGAACCCTGGCTGAACTTTGTTGGCTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAATGCTTGTTCAGTAACTaGTTCAGTTGTCTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: NKWDRGAIYGKESDWDTECLFSN*FSCLSL
Trigger: CAGACTGAGACAACTGAACAAGTTACTGAACAAGCA...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGGTAGGTGGTAATGAGTTGGCATGTACAGGTAGAGGGAAGGTTGTTGAAGGATGTATTGTCCCATGCTaGTTCAGTAACTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LVGGNELACTGRGKVVEGCIVPC*FSNLFS
Trigger: ACTGAACAAGTTACTGAACAAGCATGGGACAATACA...TCCTTCAACAACCTTCCCTCTACCTGTACATGCCAACTCATTACCACCTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTTTATCTCTTGCTGTATaGTCCCATGCTTGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTLSLAV*SHACSV
Trigger: TACTGAACAAGCATGGGACAATACAGCAAGAGATAA...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAGGCAAGTTTATCTCTaGCTGTATTGTCCCATGCTT +
Preference number: 5 (lower is better)
Translates to: NKWDRGAIYGKESDWDTERQVYL*LYCPML
Trigger: AAGCATGGGACAATACAGCAAGAGATAAACTTGCCT...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAGTGCATCATGGGCACTaGAACAGTGGTGGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKVHHGH*NSGGLV
Trigger: GACAAGACCACCACTGTTCAAGTGCCCATGATGCAC...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TATTGGAGTACTGGGATACGAAGACCTGACCTGCTTTTTAGCTATTCCCCAGAAGAAAGAGAATACTCCTaGTGCTTCTCTCCAAAATCA +
Preference number: 5 (lower is better)
Translates to: YWSTGIRRPDLLFSYSPEEREYS*CFSPKS
Trigger: TGATTTTGGAGAGAAGCACAAGGAGTATTCTCTTTC...TTCTGGGGAATAGCTAAAAAGCAGGTCAGGTCTTCGTATCCCAGTACTCCAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp CCCATAGTGGGAGTTCCTTTATTCAACCTACCAGTGTCAGATCTGGCAAGAACTGAGCCTTCCTATGCTTaGGATAATAATGAATTACTC +
Preference number: 5 (lower is better)
Translates to: PIVGVPLFNLPVSDLARTEPSYA*DNNELL
Trigger: GAGTAATTCATTATTATCCAAAGCATAGGAAGGCTC...AGTTCTTGCCAGATCTGACACTGGTAGGTTGAATAAAGGAACTCCCACTATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp GGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAAAAAGAGGGTCTATTGCTTGTTCAGTAACTaGTTCAGTTGTCTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GVLYMERSLIGIQKKRVYCLFSN*FSCLSL
Trigger: CAGACTGAGACAACTGAACAAGTTACTGAACAAGCA...ATAGACCCTCTTTTTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp AACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAGAATGTATTGTCCCATGCTaGTTCAGTAACTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: NKWDRGAIYGKESDWDTECIVPC*FSNLFS
Trigger: ACTGAACAAGTTACTGAACAAGCATGGGACAATACA...TTCTGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 90 bp TTATTTATTTATTTCCCATTGCAATACACACGTGCAATTAGCCAATaGCCTTTTTCCCAACTACGCTTCCGTTGGGTTCACAACTTTCCC +
Preference number: 5 (lower is better)
Translates to: LFIYFPLQYTRAISQ*PFSQLRFRWVHNFP
Trigger: GGGAAAGTTGTGAACCCAACGGAAGCGTAGTTGGGAAAAAGGCCATTGGCTAATTGCACGTGTGTATTGCAATGGGAAATAAATAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTAAACAAGTGGGACAGGGGTGCTATATATGGAAAGGAGTCTGATTGGGATACAATTAGAGCAAATGAGTaGAGGGGTATTCTGACAAAG +
Preference number: 5 (lower is better)
Translates to: LNKWDRGAIYGKESDWDTIRANE*RGILTK
Trigger: CTTTGTCAGAATACCCCTCAACTCATTTGCTCTAAT...TGTATCCCAATCAGACTCCTTTCCATATATAGCACCCCTGTCCCACTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS GCA 90 bp GCTCACATCAATCACACCAGGCTATATTATTTATTTATTTCCCATTaGAATACACACGTGCAATTAGCCAATGGCCTTTTTCCCAACTAC +
Preference number: 5 (lower is better)
Translates to: AHINHTRLYYLFISH*NTHVQLANGLFPNY
Trigger: GTAGTTGGGAAAAAGGCCATTGGCTAATTGCACGTGTGTATTGCAATGGGAAATAAATAAATAATATAGCCTGGTGTGATTGATGTGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAAGTGGTTTCAGATGCTaGCCAATGAAGAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKSGFRC*PMKRAF
Trigger: AAATGCCCTCTTCATTGGCAAGCATCTGAAACCACT...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS-3UTR CAA 90 bp TTGAAGGATCTGGGGATACAAAAGTACCAATATTCAGTGAAATTAGAGCCAAAAAGGCAAGTTTATCTCTaGCTGTATTGTCCCATGCTT +
Preference number: 5 (lower is better)
Translates to: LKDLGIQKYQYSVKLEPKRQVYL*LYCPML
Trigger: AAGCATGGGACAATACAGCAAGAGATAAACTTGCCT...TTTTGGCTCTAATTTCACTGAATATTGGTACTTTTGTATCCCCAGATCCTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 72 bp ACATGGCAGCTTCCACTGACTCCATCTGTCCCTCCTTaGGAAGAACAAAGAGTGCCAGAGCATTCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: TWQLPLTPSVPP*EEQRVPEHSCC
Trigger: ACAGCAAGAATGCTCTGGCACTCTTTGTTCTTCCCAAGGAGGGACAGATGGAGTCAGTGGAAGCTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327674.8
ENST00000372563.2
ENST00000487487.1
CDS CAA 72 bp CCATGCTGGATCTCTACCATTGGAGTGTCTGTGAGGTaGAACCCCAAGGTCTCCACAATCTCAGTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: PCWISTIGVSVR*NPKVSTISVWV
Trigger: CACCCAAACTGAGATTGTGGAGACCTTGGGGTTCAACCTCACAGACACTCCAATGGTAGAGATCCAGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS GCA 72 bp TTCAGGCTGATCCGAAAGTTCAACTTCAGGGACAGCTaGAGCTTCAGTTCCCTTTTCACCAATGTGCAGCAC +
Preference number: 6 (lower is better)
Translates to: FRLIRKFNFRDS*SFSSLFTNVQH
Trigger: GTGCTGCACATTGGTGAAAAGGGAACTGAAGCTGCAGCTGTCCCTGAAGTTGAACTTTCGGATCAGCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 72 bp TATTTCCCATTGCAATACACACGTGCAATTAGCCAATaGCCTTTTTCCCAACTACGCTTCCGTTGGGTTCAC +
Preference number: 6 (lower is better)
Translates to: YFPLQYTRAISQ*PFSQLRFRWVH
Trigger: GTGAACCCAACGGAAGCGTAGTTGGGAAAAAGGCCATTGGCTAATTGCACGTGTGTATTGCAATGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CAA 90 bp TCAAAAGTGTGGCTCCAAGGTCATATGTGGCAGAAATGGAAAACTTaGGAACAAACAAGTCAACCCATCCCTTCTGTAGTAAGCGGTTCC +
Preference number: 6 (lower is better)
Translates to: SKVWLQGHMWQKWKT*EQTSQPIPSVVSGS
Trigger: GGAACCGCTTACTACAGAAGGGATGGGTTGACTTGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATGACCTTGGAGCCACACTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327674.8
ENST00000372563.2
ENST00000487487.1
CDS TCA 72 bp ATTTGGATAATAGGGTGTAGGAAAGTGTTTTCAGGCTaGTCCGAAAGTTCAACTTCAGGGACAGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: IWIIGCRKVFSG*SESSTSGTAAA
Trigger: AGCTGCAGCTGTCCCTGAAGTTGAACTTTCGGATCAGCCTGAAAACACTTTCCTACACCCTATTATCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 72 bp CCACTAGGTGATAGTATTGTTCCATCTGGTGCATCATaGGCACTTGAACAGTGGTGGTCTTGTCTATTAAGA +
Preference number: 6 (lower is better)
Translates to: PLGDSIVPSGAS*ALEQWWSCLLR
Trigger: TCTTAATAGACAAGACCACCACTGTTCAAGTGCCCATGATGCACCAGATGGAACAATACTATCACCTAGTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 72 bp GCACTTGAACAGTGGTGGTCTTGTCTATTAAGAAGCTaGAACTGTCTTCTGTCTTGGATGGATCAAAAGGAT +
Preference number: 6 (lower is better)
Translates to: ALEQWWSCLLRS*NCLLSWMDQKD
Trigger: ATCCTTTTGATCCATCCAAGACAGAAGACAGTTCCAGCTTCTTAATAGACAAGACCACCACTGTTCAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 72 bp TCAAAAGTGTGGCTCCAAGGTCATATGTGGCAGAAATaGAAAACTTTGGAACAAACAAGTCAACCCATCCCT +
Preference number: 6 (lower is better)
Translates to: SKVWLQGHMWQK*KTLEQTSQPIP
Trigger: AGGGATGGGTTGACTTGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATGACCTTGGAGCCACACTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327674.8
ENST00000372563.2
ENST00000487487.1
CDS CAA 72 bp GTCTTGTCTATTAAGAAGCTGGAACTGTCTTCTGTCTaGGATGGATCAAAAGGATTTGCCCACTGGGCTTTA +
Preference number: 6 (lower is better)
Translates to: VLSIKKLELSSV*DGSKGFAHWAL
Trigger: TAAAGCCCAGTGGGCAAATCCTTTTGATCCATCCAAGACAGAAGACAGTTCCAGCTTCTTAATAGACAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327674.8
ENST00000372563.2
CDS CCA 72 bp TGCCCATCTTCAAAAGTGTGGCTCCAAGGTCATATGTaGCAGAAATGGAAAACTTTGGAACAAACAAGTCAA +
Preference number: 6 (lower is better)
Translates to: CPSSKVWLQGHM*QKWKTLEQTSQ
Trigger: TTGACTTGTTTGTTCCAAAGTTTTCCATTTCTGCCACATATGACCTTGGAGCCACACTTTTGAAGATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327674.8
ENST00000372563.2
ENST00000487487.1