RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000100665

Ensembl transcript IDs: ENST00000298841.5, ENST00000555095.5, ENST00000557004.6

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATaGTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGG +
Preference number: 1 (lower is better)
Translates to: ARPLSRGRNLLQEVG*SARGCTAPGCGMSR
Trigger: CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR GCA 90 bp CCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTaGCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: PPFQRQKLAPRGRML*QRLHSTRVWNVQAL
Trigger: CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR TCA 90 bp GTCTTCATGGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTaGAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAG +
Preference number: 1 (lower is better)
Translates to: VFMASCCLLGTTSLL*KGPAPFPEAETCSK
Trigger: CTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCCATGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555095.5
3UTR-3UTR GCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCCCAGCCCTCCCCTaGCACATCCTCCTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHLPALP*HILLLG
Trigger: TCCAAGCAGGAGGATGTGGCAGGGGAGGGCTGGGAG...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACAGCACCTGCTGTCCTaGACTCCTGGACCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPQHLLS*TPGPSV
Trigger: CACCGAAGGTCCAGGAGTCCAGGACAGCAGGTGCTG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp TGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGCCACCGGCCAGCACCTaGTGTCCTGGACTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: CEKGPPPFQRQKLAPRGRPPAST*CPGLLD
Trigger: GTCCAGGAGTCCAGGACAGCAGGTGCTGGCCGGTGG...CCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp CCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCCACCGGCCAGCACCTaGTGTCCTGGACTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PFPEAETCSKRSDALPEAPPAST*CPGLLD
Trigger: GTCCAGGAGTCCAGGACAGCAGGTGCTGGCCGGTGG...AGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCGGAATGTCCAGGCCCTaGCCATCTCAGTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGGMSRP*PSQCPS
Trigger: GGAGGGGCACTGAGATGGGCAGGGCCTGGACATTCC...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGGAATGTCCAGGCCCTaGCCATCTCAGTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRGMSRP*PSQCPS
Trigger: GGAGGGGCACTGAGATGGGCAGGGCCTGGACATTCC...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CCA 90 bp CCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGCAGCACCTGCTGTCCTaGACTCCTGGACCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: PPPFQRQKLAPRGRMLCQQHLLS*TPGPSV
Trigger: CACCGAAGGTCCAGGAGTCCAGGACAGCAGGTGCTG...CTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGACACAGCACCAGGGTGTaGAATGTCCAGGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGHSTRV*NVQALP
Trigger: GGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTG...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR CAA 90 bp CAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTaGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCA +
Preference number: 2 (lower is better)
Translates to: QPVVKRARPLSRGRN*LQEVGCSARGCTAP
Trigger: TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCCCTGCCACATCCTCCTaGTTGGAACAGATGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ARPLSRGRNLLQEVGCSAPATSS*LEQMSS
Trigger: GCTGCTCATCTGTTCCAAGCAGGAGGATGTGGCAGG...GGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCTGCCACATCCTCCTaGTTGGAACAGATGAGCAGC +
Preference number: 2 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRPATSS*LEQMSS
Trigger: GCTGCTCATCTGTTCCAAGCAGGAGGATGTGGCAGG...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp GTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGGGAATGTCCAGGCCCTaGCCATCTCAGTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: VYSVQPACCEKGPPPFQRGMSRP*PSQCPS
Trigger: GGAGGGGCACTGAGATGGGCAGGGCCTGGACATTCC...CCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCACAGCACCTGCTGTCCTaGACTCCTGGACCTTCGGTG +
Preference number: 2 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPQHLLS*TPGPSV
Trigger: CACCGAAGGTCCAGGAGTCCAGGACAGCAGGTGCTG...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCTGCCACATCCTCCTaGTTGGAACAGATGAGCAGC +
Preference number: 2 (lower is better)
Translates to: EAETCSKRSDALPEAAQHPATSS*LEQMSS
Trigger: GCTGCTCATCTGTTCCAAGCAGGAGGATGTGGCAGG...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR GCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCTCCCAGCCCTCCCCTaGCACATCCTCCTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: LDSWTFGVILVPNSKHRALPALP*HILLLG
Trigger: TCCAAGCAGGAGGATGTGGCAGGGGAGGGCTGGGAG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CCA 90 bp GAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGGCTGTCCTGGACTCCTaGACCTTCGGTGTCATCCTT +
Preference number: 2 (lower is better)
Translates to: EKGPPPFQRQKLAPRGRMAVLDS*TFGVIL
Trigger: AAGGATGACACCGAAGGTCCAGGAGTCCAGGACAGC...CATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CCA 90 bp TGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGGCTGTCCTGGACTCCTaGACCTTCGGTGTCATCCTT +
Preference number: 2 (lower is better)
Translates to: CEKGPPPFQRQKLAPRGRAVLDS*TFGVIL
Trigger: AAGGATGACACCGAAGGTCCAGGAGTCCAGGACAGC...CCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CAA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCGCCACATCCTCCTGCTaGGAACAGATGAGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSATSSC*EQMSSP
Trigger: AGGGCTGCTCATCTGTTCCAAGCAGGAGGATGTGGC...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR-3UTR CAA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGAGCCACATCCTCCTGCTaGGAACAGATGAGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGATSSC*EQMSSP
Trigger: AGGGCTGCTCATCTGTTCCAAGCAGGAGGATGTGGC...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR GCA 72 bp CAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTaGCAGAGGCTGCACAGCACCAGGGTGTGGAATGTC +
Preference number: 3 (lower is better)
Translates to: QRQKLAPRGRML*QRLHSTRVWNV
Trigger: GACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR GCA 72 bp CTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATaGTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: LSRGRNLLQEVG*SARGCTAPGCG
Trigger: TCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
3UTR TCA 72 bp GCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTaGAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACT +
Preference number: 3 (lower is better)
Translates to: ASCCLLGTTSLL*KGPAPFPEAET
Trigger: AGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCGCGAAGCTGGTGGCTaGTGCAGCCTCGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQAREAGG*CSLGAS
Trigger: GCTGGCACCGAGGCTGCAGCAGCCACCAGCTTCGCG...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCGCGAAGCTGGTGGCTaGTGCAGCCTCGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRREAGG*CSLGAS
Trigger: GCTGGCACCGAGGCTGCAGCAGCCACCAGCTTCGCG...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCAGCCACCGGCCAGCACCTaGTGTCCTGGACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ARGCTAPGCGMSRPCPSQPPAST*CPGLLD
Trigger: GTCCAGGAGTCCAGGACAGCAGGTGCTGGCCGGTGG...CTGAGATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCCCACCGGCCAGCACCTaGTGTCCTGGACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ARPLSRGRNLLQEVGCSAPPAST*CPGLLD
Trigger: GTCCAGGAGTCCAGGACAGCAGGTGCTGGCCGGTGG...GGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCGGAATGTCCAGGCCCTaGCCATCTCAGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQAGMSRP*PSQCPS
Trigger: GGAGGGGCACTGAGATGGGCAGGGCCTGGACATTCC...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCAGTCTGTCCTGGAGTaGACCCCCTGGGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHQSVLE*TPWVAV
Trigger: GACAGCCACCCAGGGGGTCCACTCCAGGACAGACTG...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATGCCCTGGGAGGGCTATaGTTTCGTGGGGTCGACGAC +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHALGGL*FRGVDD
Trigger: GTCGTCGACCCCACGAAACCATAGCCCTCCCAGGGC...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCGCCCTGGGAGGGCTATaGTTTCGTGGGGTCGACGAC +
Preference number: 4 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQAALGGL*FRGVDD
Trigger: GTCGTCGACCCCACGAAACCATAGCCCTCCCAGGGC...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACACAGCACCAGGGTGTaGAATGTCCAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPHSTRV*NVQALP
Trigger: GGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCATGGCCGGGGAGGTTaGGAGTGTGCAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRHGRGG*ECAGGA
Trigger: AGCACCTCCTGCACACTCTCAACCTCCCCGGCCATG...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCACGCGAAGCTGGTGGCTaGTGCAGCCTCGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPREAGG*CSLGAS
Trigger: GCTGGCACCGAGGCTGCAGCAGCCACCAGCTTCGCG...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCCCACCGGCCAGCACCTaGTGTCCTGGACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSPPAST*CPGLLD
Trigger: GTCCAGGAGTCCAGGACAGCAGGTGCTGGCCGGTGG...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGAGAGGTCGGATGCTCTaGCAGAGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALRGRML*QRLHST
Trigger: GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCT...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATAGGCCCTCAAGGATCTaGCTGCGGCTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHRPSRI*LRLCEQ
Trigger: CTGCTCACACAGCCGCAGCCAGATCCTTGAGGGCCT...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGAGGCCCTCAAGGATCTaGCTGCGGCTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALRPSRI*LRLCEQ
Trigger: CTGCTCACACAGCCGCAGCCAGATCCTTGAGGGCCT...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCCAGCACCTGCTGTCCTaGACTCCTGGACCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIQHLLS*TPGPSV
Trigger: CACCGAAGGTCCAGGAGTCCAGGACAGCAGGTGCTG...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCAGCCAGCTGTGTGTCCCTaGGGGAGGCTTTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ARGCTAPGCGMSRPCPSQPAVCP*GRLFWV
Trigger: GACCCAGAAAAGCCTCCCCCAGGGACACACAGCTGG...CTGAGATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR TCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGACGTGCAGCTGGCCATaGGAAAGGGCCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALTCSWP*ERASSP
Trigger: TGGACTACTGGCCCTTTCTCATGGCCAGCTGCACGT...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCTGGCTGCGGCTGTGTaGGCAGGCCCCCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PFPEAETCSKRSDALPEALAAAV*AGPQGK
Trigger: CTTTCCCTGGGGGCCTGCTCACACAGCCGCAGCCAG...AGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCCAAGGAAGGGCCGGTTaGATCGCAGGATGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIQGRAG*IAGCGD
Trigger: ATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTG...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGACAACCAGCCTGTTGTaGAAAGGGCCCGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALTTSLL*KGPAPF
Trigger: AAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGT...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACGTAGGCCGCCGAGATaGTCAGCGGGGAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPRRPPR*SAGRKR
Trigger: TCTTTTTCTCCCCGCTGAGCATCTCGGCGGCCTACG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCAGGAACAGAGCACTaGCCACGCGTGTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPSGTEH*PRVFPA
Trigger: GGCTGGAAACACGCGTGGGCAGTGCTCTGTTCCTGA...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGCGGCACAGTCTGTCCTaGAGTGGACCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRRHSLS*SGPPGW
Trigger: CCACCCAGGGGGTCCACTCCAGGACAGACTGTGCCG...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCCGGCACAGTCTGTCCTaGAGTGGACCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCRHSLS*SGPPGW
Trigger: CCACCCAGGGGGTCCACTCCAGGACAGACTGTGCCG...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGCCCCCAGGGAAAGCATaGCGTAGGCCGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: CEKGPPPFQRQKLAPRGRPPGKA*RRPPRC
Trigger: GCATCTCGGCGGCCTACGCCATGCTTTCCCTGGGGG...CCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCCCCCAGGGAAAGCATaGCGTAGGCCGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: KGPAPFPEAETCSKRSDAPPGKA*RRPPRC
Trigger: GCATCTCGGCGGCCTACGCCATGCTTTCCCTGGGGG...AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATAGGGCTATGGTTTCGTaGGGTCGACGACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHRAMVS*GRRPCP
Trigger: TGGGCAAGGTCGTCGACCCCACGAAACCATAGCCCT...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATAGTGGACCCCCTGGGTaGCTGTCTCAGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHSGPPG*LSQLCL
Trigger: AAGACAGAGCTGAGACAGCCACCCAGGGGGTCCACT...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCAGGGCAGAGAAGAATTTaGTCGCGAAGCTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPGQRRI*SRSWWL
Trigger: CAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCC...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATGGGCAGAGAAGAATTTaGTCGCGAAGCTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHGQRRI*SRSWWL
Trigger: CAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCC...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCAGTGGGGTCGACGACCTTaGCCAGAAAGAGGACACTCT +
Preference number: 4 (lower is better)
Translates to: ARGCTAPGCGMSRPCPSQWGRRP*PERGHS
Trigger: AGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCA...CTGAGATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATGGGGTCGACGACCTTaGCCAGAAAGAGGACACTCT +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPWGRRP*PERGHS
Trigger: AGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCA...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCCTGCCACATCCTCCTaGTTGGAACAGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQAPATSS*LEQMSS
Trigger: GCTGCTCATCTGTTCCAAGCAGGAGGATGTGGCAGG...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGCTCCCAGCCCTCCCCTaGCACATCCTCCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRLPALP*HILLLG
Trigger: TCCAAGCAGGAGGATGTGGCAGGGGAGGGCTGGGAG...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCCTCCCAGCCCTCCCCTaGCACATCCTCCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCLPALP*HILLLG
Trigger: TCCAAGCAGGAGGATGTGGCAGGGGAGGGCTGGGAG...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGGGAATGTCCAGGCCCTaGCCATCTCAGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EKGPPPFQRQKLAPRGRMGMSRP*PSQCPS
Trigger: GGAGGGGCACTGAGATGGGCAGGGCCTGGACATTCC...CATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGCAGTCTGTCCTGGAGTaGACCCCCTGGGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRQSVLE*TPWVAV
Trigger: GACAGCCACCCAGGGGGTCCACTCCAGGACAGACTG...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCAGTCTGTCCTGGAGTaGACCCCCTGGGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTQSVLE*TPWVAV
Trigger: GACAGCCACCCAGGGGGTCCACTCCAGGACAGACTG...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCCAGCACCTGCTGTCCTaGACTCCTGGACCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSQHLLS*TPGPSV
Trigger: CACCGAAGGTCCAGGAGTCCAGGACAGCAGGTGCTG...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGACTGGAGTGGACCCCCTaGGTGGCTGTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGLEWTP*VAVSAL
Trigger: CAGAGCTGAGACAGCCACCCAGGGGGTCCACTCCAG...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
3UTR CAA 72 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTaGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRN*LQEVGCSARGC
Trigger: GCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACATGGCCGGGGAGGTTaGGAGTGTGCAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKHGRGG*ECAGGA
Trigger: AGCACCTCCTGCACACTCTCAACCTCCCCGGCCATG...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCAGGGGCCTTTCTAGCCTaGGTATTTCTCACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPGAFLA*VFLTSS
Trigger: GCTAGAGGTGAGAAATACTCAGGCTAGAAAGGCCCC...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR GCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACAACTCTCACCATCATaGTCAACGTGCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPQLSPS*STCSWP
Trigger: TGGCCAGCTGCACGTTGAGCATGATGGTGAGAGTTG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGAGAGTGTGCAGGAGGTaGTGGAAGCCCCTATGGACA +
Preference number: 4 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRRVCRR*WKPLWT
Trigger: TGTCCATAGGGGCTTCCAGCACCTCCTGCACACTCT...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGAGGTTGAGAGTGTaGAGGAGGTGCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPGRLRV*RRCWKP
Trigger: GGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCC...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCGGGAGGTTGAGAGTGTaGAGGAGGTGCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTGRLRV*RRCWKP
Trigger: GGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCC...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGGAGGTTGAGAGTGTaGAGGAGGTGCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: AETCSKRSDALPEAAQHQGRLRV*RRCWKP
Trigger: GGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCC...CTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCTGGGGTCGACGACCTTaGCCAGAAAGAGGACACTCT +
Preference number: 4 (lower is better)
Translates to: ARPLSRGRNLLQEVGCSAWGRRP*PERGHS
Trigger: AGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCA...GGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGCGTGTTTCCAGCCCATaGCCGGGGAGGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRRVSSP*PGRLRV
Trigger: CACTCTCAACCTCCCCGGCCATGGGCTGGAAACACG...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCGTGTTTCCAGCCCATaGCCGGGGAGGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHRVSSP*PGRLRV
Trigger: CACTCTCAACCTCCCCGGCCATGGGCTGGAAACACG...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGTTGAATCGCAGGATGTaGCGATTGGTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALLNRRM*RLVWAE
Trigger: CTCTGCCCAGACCAATCGCCACATCCTGCGATTCAA...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCTTGAATCGCAGGATGTaGCGATTGGTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQALNRRM*RLVWAE
Trigger: CTCTGCCCAGACCAATCGCCACATCCTGCGATTCAA...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGGCTGTCCTGGACTCCTaGACCTTCGGTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRAVLDS*TFGVIL
Trigger: AAGGATGACACCGAAGGTCCAGGAGTCCAGGACAGC...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCAGCACCTGCTGTCCTaGACTCCTGGACCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTQHLLS*TPGPSV
Trigger: CACCGAAGGTCCAGGAGTCCAGGACAGCAGGTGCTG...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCACAGCACCAGGGTGTaGAATGTCCAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPHSTRV*NVQALP
Trigger: GGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTG...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCCTCTCAGGCCTGGATTaGCAGCCAGAAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSLSGLD*QPEDLG
Trigger: GCCAAGGTCTTCTGGCTGCCAATCCAGGCCTGAGAG...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR TCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAACGTGCAGCTGGCCATaGGAAAGGGCCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPTCSWP*ERASSP
Trigger: TGGACTACTGGCCCTTTCTCATGGCCAGCTGCACGT...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCTGGCTGCGGCTGTGTaGGCAGGCCCCCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATLAAAV*AGPQGK
Trigger: CTTTCCCTGGGGGCCTGCTCACACAGCCGCAGCCAG...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCACAAGGAAGGGCCGGTTaGATCGCAGGATGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPQGRAG*IAGCGD
Trigger: ATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTG...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATGGTGGGAGCTGTTACTaGAACTCTCACCATCATGCT +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHGGSCY*NSHHHA
Trigger: AGCATGATGGTGAGAGTTGCAGTAACAGCTCCCACC...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCCCTGTCTCCAGAATCTaGTGGTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: ARPLSRGRNLLQEVGCSAPVSRI*WWELLL
Trigger: CAGTAACAGCTCCCACCAGCAGATTCTGGAGACAGG...GGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGTCAGGAACAGAGCACTaGCCACGCGTGTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRSGTEH*PRVFPA
Trigger: GGCTGGAAACACGCGTGGGCAGTGCTCTGTTCCTGA...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCAAGAGGACACTCTGGGTaGTGGTGGAAAAGATCACCA +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPRGHSG*WWKRSP
Trigger: TGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCT...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCCAGAATCTGCTGGTaGGAGCTGTTACTGCAACTC +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPISRICW*ELLLQL
Trigger: GAGTTGCAGTAACAGCTCCCACCAGCAGATTCTGGA...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCCAGAATCTGCTGGTaGGAGCTGTTACTGCAACTC +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPSRICW*ELLLQL
Trigger: GAGTTGCAGTAACAGCTCCCACCAGCAGATTCTGGA...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGACCCCCAGGGAAAGCATaGCGTAGGCCGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LFTRYNQPVVKRARPLSRPPGKA*RRPPRC
Trigger: GCATCTCGGCGGCCTACGCCATGCTTTCCCTGGGGG...TCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCTGCTGGAAGCCCCTATaGACATCGGACTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSCWKPL*TSDSDS
Trigger: GCTGTCTGAGTCCGATGTCCATAGGGGCTTCCAGCA...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCGTGTGCAGGAGGTGCTaGAAGCCCCTATGGACATCG +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTVCRRC*KPLWTS
Trigger: CGATGTCCATAGGGGCTTCCAGCACCTCCTGCACAC...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACGTGTTTCCAGCCCATaGCCGGGGAGGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKRVSSP*PGRLRV
Trigger: CACTCTCAACCTCCCCGGCCATGGGCTGGAAACACG...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCTCCAAGGTGGCCTTGTaGAAACTTTTGGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQASKVAL*KLLDAS
Trigger: GGAGGCATCCAAAAGTTTCCACAAGGCCACCTTGGA...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCCATCCACGTCCAAGGTaGCCTTGTGGAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIHPRPR*PCGNFW
Trigger: CCAAAAGTTTCCACAAGGCCACCTTGGACGTGGATG...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCGGACACTCTGGGTGCTaGTGGAAAAGATCACCACAA +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIGHSGC*WKRSPQ
Trigger: TTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCC...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGGGACACTCTGGGTGCTaGTGGAAAAGATCACCACAA +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALGHSGC*WKRSPQ
Trigger: TTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCC...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGCTATGGTTTCGTaGGGTCGACGACCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTRAMVS*GRRPCP
Trigger: TGGGCAAGGTCGTCGACCCCACGAAACCATAGCCCT...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACAGTGGACCCCCTGGGTaGCTGTCTCAGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHSGPPG*LSQLCL
Trigger: AAGACAGAGCTGAGACAGCCACCCAGGGGGTCCACT...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCATGGCCGGGGAGGTTaGGAGTGTGCAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAHGRGG*ECAGGA
Trigger: AGCACCTCCTGCACACTCTCAACCTCCCCGGCCATG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCATGGAGAACAGATCCGTaGAGCCCAGCCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPWRTDP*SPAWAK
Trigger: TTTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCA...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGGAGAACAGATCCGTaGAGCCCAGCCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGWRTDP*SPAWAK
Trigger: TTTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCA...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCACAACCAGCCTGTTGTaGAAAGGGCCCGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPTTSLL*KGPAPF
Trigger: AAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGT...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCCCAGAGGCAGAAACTTaGTCCAAGAGGTCGGATGCT +
Preference number: 4 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSPEAET*SKRSDA
Trigger: AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGG...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGATAGTCACCCACCAGTaGCCATGGACCCTAAGTCGG +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRIVTHQ*PWTLSR
Trigger: CCGACTTAGGGTCCATGGGCACTGGTGGGTGACTAT...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTGGAAGCCCCTATaGACATCGGACTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGCWKPL*TSDSDS
Trigger: GCTGTCTGAGTCCGATGTCCATAGGGGCTTCCAGCA...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTGCTGGAAGCCCCTATaGACATCGGACTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCCWKPL*TSDSDS
Trigger: GCTGTCTGAGTCCGATGTCCATAGGGGCTTCCAGCA...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGGTGTGCAGGAGGTGCTaGAAGCCCCTATGGACATCG +
Preference number: 4 (lower is better)
Translates to: VYSVQPACCEKGPPPFQRVCRRC*KPLWTS
Trigger: CGATGTCCATAGGGGCTTCCAGCACCTCCTGCACAC...CCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGTGGTCGTTGATAAGCTaGATTGTGCCCACAGTGTCG +
Preference number: 4 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRWSLIS*IVPTVS
Trigger: CGACACTGTGGGCACAATCCAGCTTATCAACGACCA...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGGGACACTCTGGGTGCTaGTGGAAAAGATCACCACAA +
Preference number: 4 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRGHSGC*WKRSPQ
Trigger: TTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCC...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCAGAAAGAGGACACTCTaGGTGCTGGTGGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIRKRTL*VLVEKI
Trigger: GATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCT...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGAGAAAGAGGACACTCTaGGTGCTGGTGGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALRKRTL*VLVEKI
Trigger: GATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCT...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCACAGATGAGCAGCCCTaGGAGGGCTATGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGTDEQP*EGYGFV
Trigger: CACGAAACCATAGCCCTCCCAGGGCTGCTCATCTGT...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGAACAGATGAGCAGCCCTaGGAGGGCTATGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGTDEQP*EGYGFV
Trigger: CACGAAACCATAGCCCTCCCAGGGCTGCTCATCTGT...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCACAGATGAGCAGCCCTaGGAGGGCTATGGTTTCGTG +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCTDEQP*EGYGFV
Trigger: CACGAAACCATAGCCCTCCCAGGGCTGCTCATCTGT...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGCTGTCCTGGACTCCTaGACCTTCGGTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPAVLDS*TFGVIL
Trigger: AAGGATGACACCGAAGGTCCAGGAGTCCAGGACAGC...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACGCTGTCCTGGACTCCTaGACCTTCGGTGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHAVLDS*TFGVIL
Trigger: AAGGATGACACCGAAGGTCCAGGAGTCCAGGACAGC...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCACAGCACCAGGGTGTaGAATGTCCAGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAHSTRV*NVQALP
Trigger: GGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGACTGGAGTGGACCCCCTaGGTGGCTGTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LFTRYNQPVVKRARPLSRLEWTP*VAVSAL
Trigger: CAGAGCTGAGACAGCCACCCAGGGGGTCCACTCCAG...TCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCCAACTCTCACCATCATaGTCAACGTGCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCQLSPS*STCSWP
Trigger: TGGCCAGCTGCACGTTGAGCATGATGGTGAGAGTTG...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCTGTCTCCAGAATCTaGTGGTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHPVSRI*WWELLL
Trigger: CAGTAACAGCTCCCACCAGCAGATTCTGGAGACAGG...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCAGAGTGTGCAGGAGGTaGTGGAAGCCCCTATGGACA +
Preference number: 4 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPRVCRR*WKPLWT
Trigger: TGTCCATAGGGGCTTCCAGCACCTCCTGCACACTCT...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACGGAATGTCCAGGCCCTaGCCATCTCAGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SWTFGVILVPNSKHRATHGMSRP*PSQCPS
Trigger: GGAGGGGCACTGAGATGGGCAGGGCCTGGACATTCC...GTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTAGAGGTCGGATGCTCTaGCAGAGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRARGRML*QRLHST
Trigger: GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCT...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCAGAGGCAGAAACTTaGTCCAAGAGGTCGGATGCT +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHPEAET*SKRSDA
Trigger: AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGG...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCATAAGATGCATCCTCTaGACTCTCAGGCGGCACAGT +
Preference number: 4 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSIRCIL*TLRRHS
Trigger: ACTGTGCCGCCTGAGAGTGCAGAGGATGCATCTTAT...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557004.6
CDS-3UTR CCA 90 bp GGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACTCCCAGGCCCTCAAGGATCTaGCTGCGGCTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPSVSSLSPTLNTELLTPRPSRI*LRLCEQ
Trigger: CTGCTCACACAGCCGCAGCCAGATCCTTGAGGGCCT...GGGAGTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATTGAATCGCAGGATGTaGCGATTGGTCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGLNRRM*RLVWAE
Trigger: CTCTGCCCAGACCAATCGCCACATCCTGCGATTCAA...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACTCCCACCCACCAGTGCCCATaGACCCTAAGTCGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GPSVSSLSPTLNTELLTPTHQCP*TLSRGL
Trigger: AAGGCCCCGACTTAGGGTCCATGGGCACTGGTGGGT...GGGAGTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR TCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACGTGCAGCTGGCCATaGGAAAGGGCCAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRATCSWP*ERASSP
Trigger: TGGACTACTGGCCCTTTCTCATGGCCAGCTGCACGT...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTGGTCCTTGAGGAAATaGATGGTTTCTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCWSLRK*MVSPTG
Trigger: CCCTGTGGGAGAAACCATTCATTTCCTCAAGGACCA...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACGTTTTTGCTGTTTGGTaGTGCCGGATAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHVFAVW*CRISQP
Trigger: GGGCTGACTTATCCGGCATCACCAAACAGCAAAAAC...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCAAGGAAGGGCCGGTTaGATCGCAGGATGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAQGRAG*IAGCGD
Trigger: ATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCCTGTCTCCAGAATCTaGTGGTGGGAGCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: PFPEAETCSKRSDALPEAPVSRI*WWELLL
Trigger: CAGTAACAGCTCCCACCAGCAGATTCTGGAGACAGG...AGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCAGAGGACACTCTGGGTaGTGGTGGAAAAGATCACCA +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCRGHSG*WWKRSP
Trigger: TGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCT...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATCCAGAATCTGCTGGTaGGAGCTGTTACTGCAACTC +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGSRICW*ELLLQL
Trigger: GAGTTGCAGTAACAGCTCCCACCAGCAGATTCTGGA...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGGTCTCCAGAATCTGCTaGTGGGAGCTGTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: CEKGPPPFQRQKLAPRGRVSRIC*WELLLQ
Trigger: TTGCAGTAACAGCTCCCACCAGCAGATTCTGGAGAC...CCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGGTCTCCAGAATCTGCTaGTGGGAGCTGTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: EKGPPPFQRQKLAPRGRMVSRIC*WELLLQ
Trigger: TTGCAGTAACAGCTCCCACCAGCAGATTCTGGAGAC...CATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCAGGAACTTCAGGTTGTaGCTCAGGAACAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGRNFRL*LRNRAL
Trigger: CAGTGCTCTGTTCCTGAGCCACAACCTGAAGTTCCT...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGAGGAACTTCAGGTTGTaGCTCAGGAACAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: CEKGPPPFQRQKLAPRGRRNFRL*LRNRAL
Trigger: CAGTGCTCTGTTCCTGAGCCACAACCTGAAGTTCCT...CCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTGGTCGTTGATAAGCTaGATTGTGCCCACAGTGTCG +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCWSLIS*IVPTVS
Trigger: CGACACTGTGGGCACAATCCAGCTTATCAACGACCA...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCTGGTCGTTGATAAGCTaGATTGTGCCCACAGTGTCG +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTWSLIS*IVPTVS
Trigger: CGACACTGTGGGCACAATCCAGCTTATCAACGACCA...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCAGAAATGGAGAACTTaGGAAGATGCAACTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALQKWRT*EDATLA
Trigger: AGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTG...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCTTGTGGAAACTTTTaGATGCCTCCAGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALPCGNF*MPPVFA
Trigger: AGCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGG...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACCTTGTGGAAACTTTTaGATGCCTCCAGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPPCGNF*MPPVFA
Trigger: AGCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACTCCAAGGTGGCCTTGTaGAAACTTTTGGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: EAETCSKRSDALPEAAQHSKVAL*KLLDAS
Trigger: GGAGGCATCCAAAAGTTTCCACAAGGCCACCTTGGA...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGACATCCACGTCCAAGGTaGCCTTGTGGAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGHPRPR*PCGNFW
Trigger: CCAAAAGTTTCCACAAGGCCACCTTGGACGTGGATG...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCGCAGGATGTGGCGATTaGTCTGGGCAGAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTAGCGD*SGQRRI
Trigger: AATTCTTCTCTGCCCAGACCAATCGCCACATCCTGC...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGAGCAGGATGTGGCGATTaGTCTGGGCAGAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGAGCGD*SGQRRI
Trigger: AATTCTTCTCTGCCCAGACCAATCGCCACATCCTGC...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGACACTCTGGGTGCTGGTaGAAAAGATCACCACAAGGA +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGHSGCW*KRSPQG
Trigger: TCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTG...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAATGGTCCTTGAGGAAATaGATGGTTTCTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKWSLRK*MVSPTG
Trigger: CCCTGTGGGAGAAACCATTCATTTCCTCAAGGACCA...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTTGGAGAACAGATCCGTaGAGCCCAGCCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAWRTDP*SPAWAK
Trigger: TTTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCA...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATAAGATGCATCCTCTaGACTCTCAGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: CEKGPPPFQRQKLAPRGRIRCIL*TLRPLA
Trigger: TGCTAGAGGCCTGAGAGTGCAGAGGATGCATCTTAT...CCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298841.5
CDS-3UTR GCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCGTAGGCCGCCGAGATaGTCAGCGGGGAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATRRPPR*SAGRKR
Trigger: TCTTTTTCTCCCCGCTGAGCATCTCGGCGGCCTACG...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTTCAGGAACAGAGCACTaGCCACGCGTGTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATSGTEH*PRVFPA
Trigger: GGCTGGAAACACGCGTGGGCAGTGCTCTGTTCCTGA...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATGTCATTCAGGAATTTTaGAAGGAACTTCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHVIQEF*KELQVV
Trigger: CACAACCTGAAGTTCCTTGCAAAATTCCTGAATGAC...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGGTCATTCAGGAATTTTaGAAGGAACTTCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALVIQEF*KELQVV
Trigger: CACAACCTGAAGTTCCTTGCAAAATTCCTGAATGAC...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGAGATGCCTCCAGTTTTTaGTGTTTGGTGATGCCGGAT +
Preference number: 4 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGDASSF*CLVMPD
Trigger: ATCCGGCATCACCAAACAGCAAAAACTGGAGGCATC...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCGATGCCTCCAGTTTTTaGTGTTTGGTGATGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTDASSF*CLVMPD
Trigger: ATCCGGCATCACCAAACAGCAAAAACTGGAGGCATC...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCCTGCCACATCCTCCTaGTTGGAACAGATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAPATSS*LEQMSS
Trigger: GCTGCTCATCTGTTCCAAGCAGGAGGATGTGGCAGG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGATAAGATGCATCCTCTaGACTCTCAGGCCTGGATTG +
Preference number: 4 (lower is better)
Translates to: AETCSKRSDALPEAAQHQIRCIL*TLRPGL
Trigger: CAATCCAGGCCTGAGAGTGCAGAGGATGCATCTTAT...CTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTGTGTGCAGGAGGTGCTaGAAGCCCCTATGGACATCG +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATVCRRC*KPLWTS
Trigger: CGATGTCCATAGGGGCTTCCAGCACCTCCTGCACAC...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCCCTCATTTTGCCTTaGTTAGGGAGAATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPSLILP*LGRMKN
Trigger: GTTTTTCATTCTCCCTAACCAAGGCAAAATGAGGGA...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGTCCAAGGTGGCCTTGTaGAAACTTTTGGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VYSVQPACCEKGPPPFQRSKVAL*KLLDAS
Trigger: GGAGGCATCCAAAAGTTTCCACAAGGCCACCTTGGA...CCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCATCCACGTCCAAGGTaGCCTTGTGGAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPHPRPR*PCGNFW
Trigger: CCAAAAGTTTCCACAAGGCCACCTTGGACGTGGATG...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGATGTGGCGATTGGTCTaGGCAGAGAAGAATTTGATC +
Preference number: 4 (lower is better)
Translates to: PPPFQRQKLAPRGRMLCQMWRLV*AEKNLI
Trigger: GATCAAATTCTTCTCTGCCCAGACCAATCGCCACAT...CTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCACTCTGGGTGCTGGTaGAAAAGATCACCACAAGGA +
Preference number: 4 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPHSGCW*KRSPQG
Trigger: TCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTG...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACAGAGTGTGCAGGAGGTaGTGGAAGCCCCTATGGACA +
Preference number: 4 (lower is better)
Translates to: SWTFGVILVPNSKHRATHRVCRR*WKPLWT
Trigger: TGTCCATAGGGGCTTCCAGCACCTCCTGCACACTCT...GTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCAATGAAAAACACGGTTaGGTCTCCTTTGTAATCCAT +
Preference number: 4 (lower is better)
Translates to: LCQRLHSTRVWNVQALPINEKHG*VSFVIH
Trigger: ATGGATTACAAAGGAGACGCAACCGTGTTTTTCATT...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCCCTCATAGACGGCCATaGTGTCATTCAGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: KRARPLSRGRNLLQEVGCPHRRP*CHSGIL
Trigger: CAAAATTCCTGAATGACACCATGGCCGTCTATGAGG...GCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGATGTGGCGATTGGTCTaGGCAGAGAAGAATTTGATC +
Preference number: 4 (lower is better)
Translates to: AETCSKRSDALPEAAQHQMWRLV*AEKNLI
Trigger: GATCAAATTCTTCTCTGCCCAGACCAATCGCCACAT...CTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAAAGAAAGAGGACACTCTaGGTGCTGGTGGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKRKRTL*VLVEKI
Trigger: GATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCT...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCTCCCACAGGGCTTTaGAGTAAATGTAATTCACCA +
Preference number: 4 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGSPTGL*SKCNSP
Trigger: TGGTGAATTACATTTACTTCAAAGCCCTGTGGGAGA...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTTGGTCCTTGAGGAAATaGATGGTTTCTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAWSLRK*MVSPTG
Trigger: CCCTGTGGGAGAAACCATTCATTTCCTCAAGGACCA...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTGTTTTTGCTGTTTGGTaGTGCCGGATAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAVFAVW*CRISQP
Trigger: GGGCTGACTTATCCGGCATCACCAAACAGCAAAAAC...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCAACTCTCACCATCATaGTCAACGTGCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATQLSPS*STCSWP
Trigger: TGGCCAGCTGCACGTTGAGCATGATGGTGAGAGTTG...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAAGAGGACACTCTGGGTaGTGGTGGAAAAGATCACCA +
Preference number: 4 (lower is better)
Translates to: LFTRYNQPVVKRARPLSRRGHSG*WWKRSP
Trigger: TGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCT...TCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAAGAATTATCAGTCTTaGGCAAAGTGGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: PPPFQRQKLAPRGRMLCQKNYQS*AKWNSW
Trigger: CCAACTGTTCCACTTTGCCCAAGACTGATAATTCTT...CTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298841.5
ENST00000555095.5
CDS-3UTR CCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTAGGAACTTCAGGTTGTaGCTCAGGAACAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRARNFRL*LRNRAL
Trigger: CAGTGCTCTGTTCCTGAGCCACAACCTGAAGTTCCT...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCCAGAAATGGAGAACTTaGGAAGATGCAACTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGQKWRT*EDATLA
Trigger: AGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTG...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCCTTGTGGAAACTTTTaGATGCCTCCAGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTPCGNF*MPPVFA
Trigger: AGCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGG...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGATGTGGCGATTGGTCTaGGCAGAGAAGAATTTGATC +
Preference number: 4 (lower is better)
Translates to: VYSVQPACCEKGPPPFQRMWRLV*AEKNLI
Trigger: GATCAAATTCTTCTCTGCCCAGACCAATCGCCACAT...CCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTGCAGGATGTGGCGATTaGTCTGGGCAGAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAAGCGD*SGQRRI
Trigger: AATTCTTCTCTGCCCAGACCAATCGCCACATCCTGC...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCACTCTGGGTGCTGGTaGAAAAGATCACCACAAGGA +
Preference number: 4 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAHSGCW*KRSPQG
Trigger: TCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp TCTTCATGGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCGGGCAGAGAAGAATTTaGTCGCGAAGCTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSWHRVVYSVQPACCEKGGQRRI*SRSWWL
Trigger: CAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCC...GCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCCATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR GCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGTCATTCAGGAATTTTaGAAGGAACTTCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPVIQEF*KELQVV
Trigger: CACAACCTGAAGTTCCTTGCAAAATTCCTGAATGAC...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAAAGAATTATCAGTCTTaGGCAAAGTGGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPKNYQS*AKWNSW
Trigger: CCAACTGTTCCACTTTGCCCAAGACTGATAATTCTT...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298841.5
ENST00000555095.5
CDS-3UTR CCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTGTCTCCAGAATCTGCTaGTGGGAGCTGTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATVSRIC*WELLLQ
Trigger: TTGCAGTAACAGCTCCCACCAGCAGATTCTGGAGAC...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCCCTCATTTTGCCTTaGTTAGGGAGAATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGSLILP*LGRMKN
Trigger: GTTTTTCATTCTCCCTAACCAAGGCAAAATGAGGGA...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp CCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCAGAAATGGAGAACTTaGGAAGATGCAACTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PFPEAETCSKRSDALPEAQKWRT*EDATLA
Trigger: AGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTG...AGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGAATGAAAAACACGGTTaGGTCTCCTTTGTAATCCAT +
Preference number: 4 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRNEKHG*VSFVIH
Trigger: ATGGATTACAAAGGAGACGCAACCGTGTTTTTCATT...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR GCA 90 bp TCTTCATGGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCAGAGGCAGAAACTTaGTCCAAGAGGTCGGATGCT +
Preference number: 4 (lower is better)
Translates to: SSWHRVVYSVQPACCEKGPEAET*SKRSDA
Trigger: AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGG...GCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCCATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CCA 90 bp TCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACCCTCATAGACGGCCATaGTGTCATTCAGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: SWTFGVILVPNSKHRATHPHRRP*CHSGIL
Trigger: CAAAATTCCTGAATGACACCATGGCCGTCTATGAGG...GTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR TCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTTCTCCCACAGGGCTTTaGAGTAAATGTAATTCACCA +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATSPTGL*SKCNSP
Trigger: TGGTGAATTACATTTACTTCAAAGCCCTGTGGGAGA...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp GGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACTCCCTCCCTCATTTTGCCTTaGTTAGGGAGAATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GPSVSSLSPTLNTELLTPSLILP*LGRMKN
Trigger: GTTTTTCATTCTCCCTAACCAAGGCAAAATGAGGGA...GGGAGTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CCA 90 bp TCTTCATGGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCTCATAGACGGCCATaGTGTCATTCAGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: SSWHRVVYSVQPACCEKGPHRRP*CHSGIL
Trigger: CAAAATTCCTGAATGACACCATGGCCGTCTATGAGG...GCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCCATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR GCA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTAATGAAAAACACGGTTaGGTCTCCTTTGTAATCCAT +
Preference number: 4 (lower is better)
Translates to: DSWTFGVILVPNSKHRATNEKHG*VSFVIH
Trigger: ATGGATTACAAAGGAGACGCAACCGTGTTTTTCATT...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACCATGGCCGGGGAGGTaGAGAGTGTGCAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPPWPGR*RVCRRC
Trigger: GCACCTCCTGCACACTCTCAACCTCCCCGGCCATGG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp CAGTGCCGCCCTGTACCAGCTGTGTGTCCCTGGGGGAGGCTTTTCTaGGTCTCCGGGCATAGTCACCCACCAGTGCCCATGGACCCTAAG +
Preference number: 5 (lower is better)
Translates to: QCRPVPAVCPWGRLF*VSGHSHPPVPMDPK
Trigger: CTTAGGGTCCATGGGCACTGGTGGGTGACTATGCCCGGAGACCCAGAAAAGCCTCCCCCAGGGACACACAGCTGGTACAGGGCGGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS CCA 90 bp ACCTTGGCCCTCAGTCAGTGCCGCCCTGTACCAGCTGTGTGTCCCTaGGGGAGGCTTTTCTGGGTCTCCGGGCATAGTCACCCACCAGTG +
Preference number: 5 (lower is better)
Translates to: TLALSQCRPVPAVCP*GRLFWVSGHSHPPV
Trigger: CACTGGTGGGTGACTATGCCCGGAGACCCAGAAAAGCCTCCCCCAGGGACACACAGCTGGTACAGGGCGGCACTGACTGAGGGCCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS TCA 90 bp ACAGAGCACTGCCCACGCGTGTTTCCAGCCCATGGCCGGGGAGGTTaGGAGTGTGCAGGAGGTGCTGGAAGCCCCTATGGACATCGGACT +
Preference number: 5 (lower is better)
Translates to: TEHCPRVFPAHGRGG*ECAGGAGSPYGHRT
Trigger: AGTCCGATGTCCATAGGGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCCCGGCCATGGGCTGGAAACACGCGTGGGCAGTGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 90 bp CGTGTTTCCAGCCCATGGCCGGGGAGGTTGAGAGTGTGCAGGAGGTaGTGGAAGCCCCTATGGACATCGGACTCAGACAGCTCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RVSSPWPGRLRVCRR*WKPLWTSDSDSSVR
Trigger: CCTCACCGAGCTGTCTGAGTCCGATGTCCATAGGGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCCCGGCCATGGGCTGGAAACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp GCCCTCCCCTGCCACATCCTCCTGCTTGGAACAGATGAGCAGCCCTaGGAGGGCTATGGTTTCGTGGGGTCGACGACCTTGCCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: ALPCHILLLGTDEQP*EGYGFVGSTTLPRK
Trigger: CTTTCTGGGCAAGGTCGTCGACCCCACGAAACCATAGCCCTCCCAGGGCTGCTCATCTGTTCCAAGCAGGAGGATGTGGCAGGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp TGCATCCTCTGCACTCTCAGGCCTGGATTGGCAGCCAGAAGACCTTaGCCCTCAGTCAGTGCCGCCCTGTACCAGCTGTGTGTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: CILCTLRPGLAARRP*PSVSAALYQLCVPG
Trigger: CCCAGGGACACACAGCTGGTACAGGGCGGCACTGACTGAGGGCCAAGGTCTTCTGGCTGCCAATCCAGGCCTGAGAGTGCAGAGGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CAA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGCCATGGCCGGGGAGGTaGAGAGTGTGCAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTRPWPGR*RVCRRC
Trigger: GCACCTCCTGCACACTCTCAACCTCCCCGGCCATGG...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGACAAGGAAGGGCCGGTaGAATCGCAGGATGTGGCGA +
Preference number: 5 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRTRKGR*NRRMWR
Trigger: TCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGT...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGGTGGGGTCGACGACCTaGCCCAGAAAGAGGACACTC +
Preference number: 5 (lower is better)
Translates to: PPPFQRQKLAPRGRMLCQVGSTT*PRKRTL
Trigger: GAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCAC...CTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCAGGGATGCCTCCAGTTTTaGCTGTTTGGTGATGCCGGA +
Preference number: 5 (lower is better)
Translates to: ARGCTAPGCGMSRPCPSQGCLQF*LFGDAG
Trigger: TCCGGCATCACCAAACAGCAAAAACTGGAGGCATCC...CTGAGATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCACGTCCAAGGTGGCCTaGTGGAAACTTTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: GRMLCQRLHSTRVWNVQATSKVA*WKLLDA
Trigger: GGCATCCAAAAGTTTCCACAAGGCCACCTTGGACGT...GGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGGTGGGGTCGACGACCTaGCCCAGAAAGAGGACACTC +
Preference number: 5 (lower is better)
Translates to: EKGPPPFQRQKLAPRGRMVGSTT*PRKRTL
Trigger: GAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCAC...CATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 90 bp ATTGGTCTGGGCAGAGAAGAATTTGATCGCGAAGCTGGTGGCTGCTaGAGCCTCGGTGCCAGCCTCATCCACGTCCAAGGTGGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: IGLGREEFDREAGGC*SLGASLIHVQGGLV
Trigger: CACAAGGCCACCTTGGACGTGGATGAGGCTGGCACCGAGGCTGCAGCAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp GAGGAGCAGGTAGTCGATAAGATGCATCCTCTGCACTCTCAGGCCTaGATTGGCAGCCAGAAGACCTTGGCCCTCAGTCAGTGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: EEQVVDKMHPLHSQA*IGSQKTLALSQCRP
Trigger: AGGGCGGCACTGACTGAGGGCCAAGGTCTTCTGGCTGCCAATCCAGGCCTGAGAGTGCAGAGGATGCATCTTATCGACTACCTGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CAA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTCCATGGCCGGGGAGGTaGAGAGTGTGCAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAPWPGR*RVCRRC
Trigger: GCACCTCCTGCACACTCTCAACCTCCCCGGCCATGG...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCCCTCGAGTTTCCTTCTaGACGTGGTCGTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIPRVSF*TWSLIS
Trigger: GCTTATCAACGACCACGTCAAGAAGGAAACTCGAGG...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATGGGCACCCGGACTGTaGTGTTCTCATCAACATAGA +
Preference number: 5 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPWAPGL*CSHQHR
Trigger: TCTATGTTGATGAGAACACAACAGTCCGGGTGCCCA...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAACAAGGAAGGGCCGGTaGAATCGCAGGATGTGGCGA +
Preference number: 5 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPTRKGR*NRRMWR
Trigger: TCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGT...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp AAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTACAAGGAAGGGCCGGTaGAATCGCAGGATGTGGCGA +
Preference number: 5 (lower is better)
Translates to: KGPAPFPEAETCSKRSDATRKGR*NRRMWR
Trigger: TCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGT...AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 90 bp ATGAGCAGCCCTGGGAGGGCTATGGTTTCGTGGGGTCGACGACCTTaGCCAGAAAGAGGACACTCTGGGTGCTGGTGGAAAAGATCACCA +
Preference number: 5 (lower is better)
Translates to: MSSPGRAMVSWGRRP*PERGHSGCWWKRSP
Trigger: TGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCACGAAACCATAGCCCTCCCAGGGCTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp ACCACAAGGAAGGGCCGGTTGAATCGCAGGATGTGGCGATTGGTCTaGGCAGAGAAGAATTTGATCGCGAAGCTGGTGGCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: TTRKGRLNRRMWRLV*AEKNLIAKLVAAAA
Trigger: GGCTGCAGCAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp GGAGGCTTTTCTGGGTCTCCGGGCATAGTCACCCACCAGTGCCCATaGACCCTAAGTCGGGGCCTTTCTAGCCTGAGTATTTCTCACCTC +
Preference number: 5 (lower is better)
Translates to: GGFSGSPGIVTHQCP*TLSRGLSSLSISHL
Trigger: GAGGTGAGAAATACTCAGGCTAGAAAGGCCCCGACTTAGGGTCCATGGGCACTGGTGGGTGACTATGCCCGGAGACCCAGAAAAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CAA 90 bp CAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCGCAAGGAACTTCAGGTaGTGGCTCAGGAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: QEVGCSARGCTAPGCGMSARNFR*WLRNRA
Trigger: TGCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTGC...GGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCAATCAAGACGTCCTTCTaGAGCTCACTGACCAAATCC +
Preference number: 5 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPIKTSF*SSLTKS
Trigger: GGATTTGGTCAGTGAGCTCAAGAAGGACGTCTTGAT...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCTGGGCACCCGGACTGTaGTGTTCTCATCAACATAGA +
Preference number: 5 (lower is better)
Translates to: ARPLSRGRNLLQEVGCSAWAPGL*CSHQHR
Trigger: TCTATGTTGATGAGAACACAACAGTCCGGGTGCCCA...GGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCACTCTTCCGCAACAAGTaGTTCCACCTCATTAGCATC +
Preference number: 5 (lower is better)
Translates to: CSARGCTAPGCGMSRPCPLFRNK*FHLISI
Trigger: GATGCTAATGAGGTGGAACAACTTGTTGCGGAAGAG...TGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCGCCTTGTGGAAACTTTaGGATGCCTCCAGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LCQRLHSTRVWNVQALPIALWKL*DASSFC
Trigger: GCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGGC...GATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGGCCTTGTGGAAACTTTaGGATGCCTCCAGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALALWKL*DASSFC
Trigger: GCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGGC...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAAGCCACATCCTCCTGCTaGGAACAGATGAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKATSSC*EQMSSP
Trigger: AGGGCTGCTCATCTGTTCCAAGCAGGAGGATGTGGC...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACAGTCTCTCGTCTCCATaGTCTCAGGGGGTTACTCAC +
Preference number: 5 (lower is better)
Translates to: EAETCSKRSDALPEAAQHSLSSP*SQGVTH
Trigger: GTGAGTAACCCCCTGAGACAATGGAGACGAGAGACT...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298841.5
ENST00000555095.5
CDS-3UTR CAA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGCAAGGAACTTCAGGTaGTGGCTCAGGAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPARNFR*WLRNRA
Trigger: TGCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTGC...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCATCAAGACGTCCTTCTaGAGCTCACTGACCAAATCC +
Preference number: 5 (lower is better)
Translates to: ARPLSRGRNLLQEVGCSAIKTSF*SSLTKS
Trigger: GGATTTGGTCAGTGAGCTCAAGAAGGACGTCTTGAT...GGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGATCAAGACGTCCTTCTaGAGCTCACTGACCAAATCC +
Preference number: 5 (lower is better)
Translates to: EVGCSARGCTAPGCGMSRIKTSF*SSLTKS
Trigger: GGATTTGGTCAGTGAGCTCAAGAAGGACGTCTTGAT...CCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGTCAATCTCCCTCATTTaGCCTTGGTTAGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: RMLCQRLHSTRVWNVQALSISLI*PWLGRM
Trigger: CATTCTCCCTAACCAAGGCAAAATGAGGGAGATTGA...CAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GCTCTGCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATTCAATCTCCCTCATTTaGCCTTGGTTAGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: ALPEAAQHQGVECPGPAHSISLI*PWLGRM
Trigger: CATTCTCCCTAACCAAGGCAAAATGAGGGAGATTGA...ATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGGATAAGTCAGCCCACTaGGAGAACAGATCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: PPPFQRQKLAPRGRMLCQDKSAH*ENRSVK
Trigger: CTTCACGGATCTGTTCTCCAAGTGGGCTGACTTATC...CTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp AAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTGGATGCCTCCAGTTTTaGCTGTTTGGTGATGCCGGA +
Preference number: 5 (lower is better)
Translates to: KGPAPFPEAETCSKRSDAGCLQF*LFGDAG
Trigger: TCCGGCATCACCAAACAGCAAAAACTGGAGGCATCC...AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGAACGTCCAAGGTGGCCTaGTGGAAACTTTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGTSKVA*WKLLDA
Trigger: GGCATCCAAAAGTTTCCACAAGGCCACCTTGGACGT...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp AAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTTGGGCAGAGAAGAATTaGATCGCGAAGCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KGPAPFPEAETCSKRSDAWAEKN*IAKLVA
Trigger: AGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCA...AGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 90 bp GGGAGCCCTCACCTGTCTCCAGAATCTGCTGGTGGGAGCTGTTACTaGAACTCTCACCATCATGCTCAACGTGCAGCTGGCCATGAGAAA +
Preference number: 5 (lower is better)
Translates to: GSPHLSPESAGGSCY*NSHHHAQRAAGHEK
Trigger: TTTCTCATGGCCAGCTGCACGTTGAGCATGATGGTGAGAGTTGCAGTAACAGCTCCCACCAGCAGATTCTGGAGACAGGTGAGGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAAAGTCTCTCGTCTCCATaGTCTCAGGGGGTTACTCAC +
Preference number: 5 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKSLSSP*SQGVTH
Trigger: GTGAGTAACCCCCTGAGACAATGGAGACGAGAGACT...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CAA 90 bp GCCAGAGGCTGCACAGCACCAGGGTGTGGAATGTCCAGGCCCTGCCCATCTCAGGAAGAATTATCAGTCTaGGGCAAAGTGGAACAGTTG +
Preference number: 5 (lower is better)
Translates to: ARGCTAPGCGMSRPCPSQEELSV*GKVEQL
Trigger: CAACTGTTCCACTTTGCCCAAGACTGATAATTCTTC...CTGAGATGGGCAGGGCCTGGACATTCCACACCCTGGTGCTGTGCAGCCTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298841.5
ENST00000555095.5
CDS-3UTR CAA 90 bp GTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATTCTTGACGTGGTCGTaGATAAGCTGGATTGTGCCC +
Preference number: 5 (lower is better)
Translates to: VKRARPLSRGRNLLQEVGFLTWS*ISWIVP
Trigger: GGGCACAATCCAGCTTATCAACGACCACGTCAAGAA...TCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACTTCTTGACGTGGTCGTaGATAAGCTGGATTGTGCCC +
Preference number: 5 (lower is better)
Translates to: EAETCSKRSDALPEAAQHFLTWS*ISWIVP
Trigger: GGGCACAATCCAGCTTATCAACGACCACGTCAAGAA...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCACCTCGAGTTTCCTTCTaGACGTGGTCGTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPPRVSF*TWSLIS
Trigger: GCTTATCAACGACCACGTCAAGAAGGAAACTCGAGG...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGCTCTTCCGCAACAAGTaGTTCCACCTCATTAGCATC +
Preference number: 5 (lower is better)
Translates to: PPPFQRQKLAPRGRMLCQLFRNK*FHLISI
Trigger: GATGCTAATGAGGTGGAACAACTTGTTGCGGAAGAG...CTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGACGTCCAAGGTGGCCTaGTGGAAACTTTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: VYSVQPACCEKGPPPFQRTSKVA*WKLLDA
Trigger: GGCATCCAAAAGTTTCCACAAGGCCACCTTGGACGT...CCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp TATGGTTTCGTGGGGTCGACGACCTTGCCCAGAAAGAGGACACTCTaGGTGCTGGTGGAAAAGATCACCACAAGGAAGGGCCGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: YGFVGSTTLPRKRTL*VLVEKITTRKGRLN
Trigger: ATTCAACCGGCCCTTCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCACGAAACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCTTCTTGACGTGGTCGTaGATAAGCTGGATTGTGCCC +
Preference number: 5 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPFLTWS*ISWIVP
Trigger: GGGCACAATCCAGCTTATCAACGACCACGTCAAGAA...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCCTCGAGTTTCCTTCTaGACGTGGTCGTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: VYSVQPACCEKGPPPFQRPRVSF*TWSLIS
Trigger: GCTTATCAACGACCACGTCAAGAAGGAAACTCGAGG...CCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCTCTTCCGCAACAAGTaGTTCCACCTCATTAGCATC +
Preference number: 5 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTLFRNK*FHLISI
Trigger: GATGCTAATGAGGTGGAACAACTTGTTGCGGAAGAG...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGCCAGAAATGGAGAACTaGGGAAGATGCAACTCTAGC +
Preference number: 5 (lower is better)
Translates to: AETCSKRSDALPEAAQHQPEMEN*GRCNSS
Trigger: GCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGG...CTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp AGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCCCAGAAATGGAGAACTaGGGAAGATGCAACTCTAGC +
Preference number: 5 (lower is better)
Translates to: RQKLAPRGRMLCQRLHSTPEMEN*GRCNSS
Trigger: GCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGG...GGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCACCAGAAATGGAGAACTaGGGAAGATGCAACTCTAGC +
Preference number: 5 (lower is better)
Translates to: GRNLLQEVGCSARGCTAPPEMEN*GRCNSS
Trigger: GCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGG...TGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAAGATAAGTCAGCCCACTaGGAGAACAGATCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKDKSAH*ENRSVK
Trigger: CTTCACGGATCTGTTCTCCAAGTGGGCTGACTTATC...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCGATAAGTCAGCCCACTaGGAGAACAGATCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: GIVLFTRYNQPVVKRARPDKSAH*ENRSVK
Trigger: CTTCACGGATCTGTTCTCCAAGTGGGCTGACTTATC...GGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGGCCTTGTGGAAACTTTaGGATGCCTCCAGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: EKGPPPFQRQKLAPRGRMALWKL*DASSFC
Trigger: GCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGGC...CATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTGCCACATCCTCCTGCTaGGAACAGATGAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: DSWTFGVILVPNSKHRATATSSC*EQMSSP
Trigger: AGGGCTGCTCATCTGTTCCAAGCAGGAGGATGTGGC...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACGCCACATCCTCCTGCTaGGAACAGATGAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SWTFGVILVPNSKHRATHATSSC*EQMSSP
Trigger: AGGGCTGCTCATCTGTTCCAAGCAGGAGGATGTGGC...GTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp GTGGAAAAGATCACCACAAGGAAGGGCCGGTTGAATCGCAGGATGTaGCGATTGGTCTGGGCAGAGAAGAATTTGATCGCGAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VEKITTRKGRLNRRM*RLVWAEKNLIAKLV
Trigger: CACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGTGATCTTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACAAAGTGTCCCAGCTaGCCTGGGACTTTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LDSWTFGVILVPNSKHRATKCPS*PGTFLV
Trigger: AACCAGGAAAGTCCCAGGCAAGCTGGGACACTTTGT...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298841.5
ENST00000555095.5
CDS-3UTR CAA 90 bp CCCCTTTCCAGAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTCAATCTCCCTCATTTaGCCTTGGTTAGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: PLSRGRNLLQEVGCSARGSISLI*PWLGRM
Trigger: CATTCTCCCTAACCAAGGCAAAATGAGGGAGATTGA...GCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTCTGGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CTGGACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTTGGGCAGAGAAGAATTaGATCGCGAAGCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LDSWTFGVILVPNSKHRAWAEKN*IAKLVA
Trigger: AGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCA...AGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp CAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACCAGGGAAGAATTATCAGTCTaGGGCAAAGTGGAACAGTTG +
Preference number: 5 (lower is better)
Translates to: QKLAPRGRMLCQRLHSTREELSV*GKVEQL
Trigger: CAACTGTTCCACTTTGCCCAAGACTGATAATTCTTC...CCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298841.5
ENST00000555095.5
CDS-3UTR CAA 90 bp GACTCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTGCAAGGAACTTCAGGTaGTGGCTCAGGAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: DSWTFGVILVPNSKHRATARNFR*WLRNRA
Trigger: TGCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTGC...AGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp GAGGCAGAAACTTGCTCCAAGAGGTCGGATGCTCTGCCAGAGGCTGCACAGCACTGTCATTCAGGAATTTaGCAAGGAACTTCAGGTTGT +
Preference number: 5 (lower is better)
Translates to: EAETCSKRSDALPEAAQHCHSGI*QGTSGC
Trigger: ACAACCTGAAGTTCCTTGCAAAATTCCTGAATGACA...GTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCTTGGAGCAAGTTTCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 90 bp GAAGAGTTTAGCCTCATAGACGGCCATGGTGTCATTCAGGAATTTTaGAAGGAACTTCAGGTTGTGGCTCAGGAACAGAGCACTGCCCAC +
Preference number: 5 (lower is better)
Translates to: EEFSLIDGHGVIQEF*KELQVVAQEQSTAH
Trigger: GTGGGCAGTGCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTGCAAAATTCCTGAATGACACCATGGCCGTCTATGAGGCTAAACTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TCGGTACAACCAGCCTGTTGTGAAAAGGGCCCGCCCCCTTTCCAGAGGCAGAAATGTCATTCAGGAATTTaGCAAGGAACTTCAGGTTGT +
Preference number: 5 (lower is better)
Translates to: SVQPACCEKGPPPFQRQKCHSGI*QGTSGC
Trigger: ACAACCTGAAGTTCCTTGCAAAATTCCTGAATGACA...TTTCTGCCTCTGGAAAGGGGGCGGGCCCTTTTCACAACAGGCTGGTTGTACCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555095.5
ENST00000557004.6
CDS-3UTR CAA 90 bp TCTTCATGGCATCGTGTTGTTTACTCGGTACAACCAGCCTGTTGTGAAAAGGGCGGATGCCTCCAGTTTTaGCTGTTTGGTGATGCCGGA +
Preference number: 5 (lower is better)
Translates to: SSWHRVVYSVQPACCEKGGCLQF*LFGDAG
Trigger: TCCGGCATCACCAAACAGCAAAAACTGGAGGCATCC...GCCCTTTTCACAACAGGCTGGTTGTACCGAGTAAACAACACGATGCCATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS-3UTR CAA 90 bp TCCTGGACCTTCGGTGTCATCCTTGTCCCCAACTCTAAACACAGAGCTACTCACTGTCATTCAGGAATTTaGCAAGGAACTTCAGGTTGT +
Preference number: 5 (lower is better)
Translates to: SWTFGVILVPNSKHRATHCHSGI*QGTSGC
Trigger: ACAACCTGAAGTTCCTTGCAAAATTCCTGAATGACA...GTGAGTAGCTCTGTGTTTAGAGTTGGGGACAAGGATGACACCGAAGGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp AGCCCAGCCTGGGCAAAATCTGATCTAATACATAGGAGCCAGAAATaGAGAACTTGGGAAGATGCAACTCTAGCTTCTTGTAAAAATTCC +
Preference number: 5 (lower is better)
Translates to: SPAWAKSDLIHRSQK*RTWEDATLASCKNS
Trigger: GGAATTTTTACAAGAAGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGGCTCCTATGTATTAGATCAGATTTTGCCCAGGCTGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 90 bp GACTGTTGTGTTCTCATCAACATAGAAGTCTTTGGGAGTGGTCCTTaGGGAAATGAATGGTTTCTCCCACAGGGCTTTGAAGTAAATGTA +
Preference number: 5 (lower is better)
Translates to: DCCVLINIEVFGSGP*GNEWFLPQGFEVNV
Trigger: TACATTTACTTCAAAGCCCTGTGGGAGAAACCATTCATTTCCTCAAGGACCACTCCCAAAGACTTCTATGTTGATGAGAACACAACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 90 bp TGGGCAAAATCTGATCTAATACATAGGAGCCAGAAATGGAGAACTTaGGAAGATGCAACTCTAGCTTCTTGTAAAAATTCCTCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: WAKSDLIHRSQKWRT*EDATLASCKNSSSA
Trigger: TGCGGAAGAGGAATTTTTACAAGAAGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGGCTCCTATGTATTAGATCAGATTTTGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 72 bp TGCCCACGCGTGTTTCCAGCCCATGGCCGGGGAGGTTaGGAGTGTGCAGGAGGTGCTGGAAGCCCCTATGGA +
Preference number: 6 (lower is better)
Translates to: CPRVFPAHGRGG*ECAGGAGSPYG
Trigger: TCCATAGGGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCCCGGCCATGGGCTGGAAACACGCGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 72 bp TGGATTGGCAGCCAGAAGACCTTGGCCCTCAGTCAGTaGCGCCCTGTACCAGCTGTGTGTCCCTGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: WIGSQKTLALSQ*RPVPAVCPWGR
Trigger: CCTCCCCCAGGGACACACAGCTGGTACAGGGCGGCACTGACTGAGGGCCAAGGTCTTCTGGCTGCCAATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS GCA 72 bp AGCCCATGGCCGGGGAGGTTGAGAGTGTGCAGGAGGTaGTGGAAGCCCCTATGGACATCGGACTCAGACAGC +
Preference number: 6 (lower is better)
Translates to: SPWPGRLRVCRR*WKPLWTSDSDS
Trigger: GCTGTCTGAGTCCGATGTCCATAGGGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCCCGGCCATGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp CCTGTACCAGCTGTGTGTCCCTGGGGGAGGCTTTTCTaGGTCTCCGGGCATAGTCACCCACCAGTGCCCATG +
Preference number: 6 (lower is better)
Translates to: PVPAVCPWGRLF*VSGHSHPPVPM
Trigger: CATGGGCACTGGTGGGTGACTATGCCCGGAGACCCAGAAAAGCCTCCCCCAGGGACACACAGCTGGTACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS CCA 72 bp CTCAGTCAGTGCCGCCCTGTACCAGCTGTGTGTCCCTaGGGGAGGCTTTTCTGGGTCTCCGGGCATAGTCAC +
Preference number: 6 (lower is better)
Translates to: LSQCRPVPAVCP*GRLFWVSGHSH
Trigger: GTGACTATGCCCGGAGACCCAGAAAAGCCTCCCCCAGGGACACACAGCTGGTACAGGGCGGCACTGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS CCA 72 bp TGCATCCTCTGCACTCTCAGGCGGCACAGTCTGTCCTaGAGTGGACCCCCTGGGTGGCTGTCTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: CILCTLRRHSLS*SGPPGWLSQLC
Trigger: ACAGAGCTGAGACAGCCACCCAGGGGGTCCACTCCAGGACAGACTGTGCCGCCTGAGAGTGCAGAGGATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557004.6
CDS CAA 72 bp CTGCACTCTCAGGCCTGGATTGGCAGCCAGAAGACCTaGGCCCTCAGTCAGTGCCGCCCTGTACCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LHSQAWIGSQKT*ALSQCRPVPAV
Trigger: CACAGCTGGTACAGGGCGGCACTGACTGAGGGCCAAGGTCTTCTGGCTGCCAATCCAGGCCTGAGAGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS GCA 72 bp CAAGGAACTTCAGGTTGTGGCTCAGGAACAGAGCACTaGCCACGCGTGTTTCCAGCCCATGGCCGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: QGTSGCGSGTEH*PRVFPAHGRGG
Trigger: ACCTCCCCGGCCATGGGCTGGAAACACGCGTGGGCAGTGCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 72 bp GCAGGATGTGGCGATTGGTCTGGGCAGAGAAGAATTTaGTCGCGAAGCTGGTGGCTGCTGCAGCCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: AGCGDWSGQRRI*SRSWWLLQPRC
Trigger: GCACCGAGGCTGCAGCAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 72 bp CCTGGGAGGGCTATGGTTTCGTGGGGTCGACGACCTTaGCCAGAAAGAGGACACTCTGGGTGCTGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: PGRAMVSWGRRP*PERGHSGCWWK
Trigger: TTTCCACCAGCACCCAGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCACGAAACCATAGCCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp ATTGTCTCAGGGGGTTACTCACGGCACAGTCTGTCCTaGAGTGGACCCCCTGGGTGGCTGTCTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: IVSGGYSRHSLS*SGPPGWLSQLC
Trigger: ACAGAGCTGAGACAGCCACCCAGGGGGTCCACTCCAGGACAGACTGTGCCGTGAGTAACCCCCTGAGACAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS CAA 72 bp CGCAGGATGTGGCGATTGGTCTGGGCAGAGAAGAATTaGATCGCGAAGCTGGTGGCTGCTGCAGCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: RRMWRLVWAEKN*IAKLVAAAASV
Trigger: CACCGAGGCTGCAGCAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 72 bp GGTCGACGACCTTGCCCAGAAAGAGGACACTCTGGGTaGTGGTGGAAAAGATCACCACAAGGAAGGGCCGGT +
Preference number: 6 (lower is better)
Translates to: GRRPCPERGHSG*WWKRSPQGRAG
Trigger: ACCGGCCCTTCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp GTGGGGTCGACGACCTTGCCCAGAAAGAGGACACTCTaGGTGCTGGTGGAAAAGATCACCACAAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: VGSTTLPRKRTL*VLVEKITTRKG
Trigger: GCCCTTCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp GAACAGATGAGCAGCCCTGGGAGGGCTATGGTTTCGTaGGGTCGACGACCTTGCCCAGAAAGAGGACACTCT +
Preference number: 6 (lower is better)
Translates to: EQMSSPGRAMVS*GRRPCPERGHS
Trigger: AGAGTGTCCTCTTTCTGGGCAAGGTCGTCGACCCCACGAAACCATAGCCCTCCCAGGGCTGCTCATCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp TCTGGGTCTCCGGGCATAGTCACCCACCAGTGCCCATaGACCCTAAGTCGGGGCCTTTCTAGCCTGAGTATT +
Preference number: 6 (lower is better)
Translates to: SGSPGIVTHQCP*TLSRGLSSLSI
Trigger: AATACTCAGGCTAGAAAGGCCCCGACTTAGGGTCCATGGGCACTGGTGGGTGACTATGCCCGGAGACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555095.5
CDS TCA 72 bp CAACTCTCACCATCATGCTCAACGTGCAGCTGGCCATaGGAAAGGGCCAGTAGTCCAACCAGCAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: QLSPSCSTCSWP*ERASSPTSRRS
Trigger: GCTCCTCCTGCTGGTTGGACTACTGGCCCTTTCTCATGGCCAGCTGCACGTTGAGCATGATGGTGAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 72 bp GTGCTGGTGGAAAAGATCACCACAAGGAAGGGCCGGTaGAATCGCAGGATGTGGCGATTGGTCTGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: VLVEKITTRKGR*NRRMWRLVWAE
Trigger: CTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGTGATCTTTTCCACCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 72 bp TGCTGGTGGAAAAGATCACCACAAGGAAGGGCCGGTTaGATCGCAGGATGTGGCGATTGGTCTGGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: CWWKRSPQGRAG*IAGCGDWSGQR
Trigger: TCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGTGATCTTTTCCACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 72 bp CACCTGTCTCCAGAATCTGCTGGTGGGAGCTGTTACTaGAACTCTCACCATCATGCTCAACGTGCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: HLSPESAGGSCY*NSHHHAQRAAG
Trigger: GCCAGCTGCACGTTGAGCATGATGGTGAGAGTTGCAGTAACAGCTCCCACCAGCAGATTCTGGAGACAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp AAGGGCCGGTTGAATCGCAGGATGTGGCGATTGGTCTaGGCAGAGAAGAATTTGATCGCGAAGCTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: KGRLNRRMWRLV*AEKNLIAKLVA
Trigger: AGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 90 bp AAGATCACCACAAGGAAGGGCCGGTTGAATCGCAGGATGTGGCGATaGGTCTGGGCAGAGAAGAATTTGATCGCGAAGCTGGTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: KITTRKGRLNRRMWR*VWAEKNLIAKLVAA
Trigger: AGCAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGTGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp ATCACCACAAGGAAGGGCCGGTTGAATCGCAGGATGTaGCGATTGGTCTGGGCAGAGAAGAATTTGATCGCG +
Preference number: 6 (lower is better)
Translates to: ITTRKGRLNRRM*RLVWAEKNLIA
Trigger: CGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 72 bp ACAAGGAAGGGCCGGTTGAATCGCAGGATGTGGCGATaGGTCTGGGCAGAGAAGAATTTGATCGCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: TRKGRLNRRMWR*VWAEKNLIAKL
Trigger: CAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 90 bp ACACTCTGGGTGCTGGTGGAAAAGATCACCACAAGGAAGGGCCGGTaGAATCGCAGGATGTGGCGATTGGTCTGGGCAGAGAAGAATTTG +
Preference number: 6 (lower is better)
Translates to: TLWVLVEKITTRKGR*NRRMWRLVWAEKNL
Trigger: CAAATTCTTCTCTGCCCAGACCAATCGCCACATCCTGCGATTCAACCGGCCCTTCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 72 bp TTTTGCTGTTTGGTGATGCCGGATAAGTCAGCCCACTaGGAGAACAGATCCGTGAAGCCCAGCCTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: FCCLVMPDKSAH*ENRSVKPSLGK
Trigger: TTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCAAGTGGGCTGACTTATCCGGCATCACCAAACAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 72 bp TGCCGGATAAGTCAGCCCACTTGGAGAACAGATCCGTaGAGCCCAGCCTGGGCAAAATCTGATCTAATACAT +
Preference number: 6 (lower is better)
Translates to: CRISQPTWRTDP*SPAWAKSDLIH
Trigger: ATGTATTAGATCAGATTTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCAAGTGGGCTGACTTATCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS GCA 72 bp AGCCTCATAGACGGCCATGGTGTCATTCAGGAATTTTaGAAGGAACTTCAGGTTGTGGCTCAGGAACAGAGC +
Preference number: 6 (lower is better)
Translates to: SLIDGHGVIQEF*KELQVVAQEQS
Trigger: GCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTGCAAAATTCCTGAATGACACCATGGCCGTCTATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 72 bp GGAAACTTTTGGATGCCTCCAGTTTTTGCTGTTTGGTaGTGCCGGATAAGTCAGCCCACTTGGAGAACAGAT +
Preference number: 6 (lower is better)
Translates to: GNFWMPPVFAVW*CRISQPTWRTD
Trigger: ATCTGTTCTCCAAGTGGGCTGACTTATCCGGCATCACCAAACAGCAAAAACTGGAGGCATCCAAAAGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 90 bp CTCATTAGCATCTCTGGAGTCAGAACCTCTTCAATCTCCCTCATTTaGCCTTGGTTAGGGAGAATGAAAAACACGGTTGCGTCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: LISISGVRTSSISLI*PWLGRMKNTVASPL
Trigger: CAAAGGAGACGCAACCGTGTTTTTCATTCTCCCTAACCAAGGCAAAATGAGGGAGATTGAAGAGGTTCTGACTCCAGAGATGCTAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CAA 72 bp ATCTCTGGAGTCAGAACCTCTTCAATCTCCCTCATTTaGCCTTGGTTAGGGAGAATGAAAAACACGGTTGCG +
Preference number: 6 (lower is better)
Translates to: ISGVRTSSISLI*PWLGRMKNTVA
Trigger: CGCAACCGTGTTTTTCATTCTCCCTAACCAAGGCAAAATGAGGGAGATTGAAGAGGTTCTGACTCCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS TCA 72 bp GTTCTCATCAACATAGAAGTCTTTGGGAGTGGTCCTTaGGGAAATGAATGGTTTCTCCCACAGGGCTTTGAA +
Preference number: 6 (lower is better)
Translates to: VLINIEVFGSGP*GNEWFLPQGFE
Trigger: TTCAAAGCCCTGTGGGAGAAACCATTCATTTCCTCAAGGACCACTCCCAAAGACTTCTATGTTGATGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6
CDS CCA 72 bp TCTGATCTAATACATAGGAGCCAGAAATGGAGAACTTaGGAAGATGCAACTCTAGCTTCTTGTAAAAATTCC +
Preference number: 6 (lower is better)
Translates to: SDLIHRSQKWRT*EDATLASCKNS
Trigger: GGAATTTTTACAAGAAGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGGCTCCTATGTATTAGATCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298841.5
ENST00000555095.5
ENST00000557004.6