RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERINC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000184716

Ensembl transcript IDs: ENST00000299969.10, ENST00000319327.6, ENST00000319327.7, ENST00000412697.1, ENST00000448553.5, ENST00000457418.5, ENST00000476490.1

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAGAAGCTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGGAGTaGAGGTGGACCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCG +
Preference number: 1 (lower is better)
Translates to: SQKLLCSCARGLVGE*RWTSNTACSRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCTTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR CCA 90 bp AAGCTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCGGTTCCT +
Preference number: 1 (lower is better)
Translates to: KLLCSCARGLVGEWR*TSNTACSRWKVAVP
Trigger: AGGAACCGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR GCA 90 bp GTGGACCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCGGTTCCTaGACATACTCGGTACACAGCCCCAGAGCCACTGAGCACTGGACA +
Preference number: 1 (lower is better)
Translates to: VDQQHSLQQVEGGGS*TYSVHSPRATEHWT
Trigger: TGTCCAGTGCTCAGTGGCTCTGGGGCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR TCA 90 bp AGGTGGCGGTTCCTGCACATACTCGGTACACAGCCCCAGAGCCACTaGGCACTGGACAGTCAGAGAGGCCAAACAGGTGGGCACACAACC +
Preference number: 1 (lower is better)
Translates to: RWRFLHILGTQPQSH*ALDSQRGQTGGHTT
Trigger: GGTTGTGTGCCCACCTGTTTGGCCTCTCTGACTGTCCAGTGCTCAGTGGCTCTGGGGCTGTGTACCGAGTATGTGCAGGAACCGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR CCA 90 bp GAAGTGGAAGGCAGAATAGTTGTAGGAAAGATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTCTTGGTCAGCTGGCCTCGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: EVEGRIVVGKMLDLD*RSWRGFLVSWPRSP
Trigger: GGGGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCCTACAACTATTCTGCCTTCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 90 bp GGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTaGTTCTGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTT +
Preference number: 1 (lower is better)
Translates to: GVASVLLSSMPWFVL*FWASYIRVPRAELL
Trigger: AAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 90 bp CTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGC +
Preference number: 1 (lower is better)
Translates to: LCPGLFCGSGLLISV*PGLNSLFSFLQGQS
Trigger: GCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGG +
Preference number: 1 (lower is better)
Translates to: GLKPGVASVLLSSMP*FVLWFWASYIRVPR
Trigger: CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR TCA 90 bp GTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTCA +
Preference number: 1 (lower is better)
Translates to: VCSVVLGFLYPCAQG*TPYFPFSKGRAESS
Trigger: TGAAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTC +
Preference number: 1 (lower is better)
Translates to: ASVLLSSMPWFVLWF*ASYIRVPRAELLIF
Trigger: GAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 90 bp GGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAA +
Preference number: 1 (lower is better)
Translates to: GQLLSSVHFLFCHSS*NEGGFVFPLPLTSK
Trigger: TTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR TCA 90 bp AGCTCCAGTGAGTCAGACACTCTGCCCAGCACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGA +
Preference number: 1 (lower is better)
Translates to: SSSESDTLPSTLDCV*PLLPVHSIDFSPNG
Trigger: TCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTGCTGGGCAGAGTGTCTGACTCACTGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 90 bp ATTCTGTCCTTGAAGGATTACTCTCTCTGGAGGACGGCTGGACAGTaGAGAGAAAGTCAGATACATGATATAGCAGCTGATGACAGAAGC +
Preference number: 1 (lower is better)
Translates to: ILSLKDYSLWRTAGQ*RESQIHDIAADDRS
Trigger: GCTTCTGTCATCAGCTGCTATATCATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCTCCAGAGAGAGTAATCCTTCAAGGACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCAVPAG*WGSGGG
Trigger: TCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGC...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR GCA 90 bp CCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGAGCTATTATGCAGCTGTaGCCGCGGGCTGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PTSSPRARKGLVPHCLLGAIMQL*PRAGGG
Trigger: TCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGC...TCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 2 (lower is better)
Translates to: PKSQERAGATLSAGISGGAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 2 (lower is better)
Translates to: PLPAQEPGKGWCHTVCWDCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLLPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGGAGAGGCCAAACAGGTaGGCACACAACCCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: LLSGDMMRWRRRLKIRGWERPNR*AHNPEG
Trigger: GCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTC...CCAGCCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGAGCAGCAGGTGGAAGGTaGCGGTTCCTGCACATACTC +
Preference number: 2 (lower is better)
Translates to: PTSSPRARKGLVPHCLLGAAGGR*RFLHIL
Trigger: GAGTATGTGCAGGAACCGCCACCTTCCACCTGCTGC...TCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGAGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: PTSSPRARKGLVPHCLLGVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...TCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCCTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: QERAGATLSAGISGGSLSLPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...GCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTCCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: GWCHTVCWDQRWFFELLIPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 2 (lower is better)
Translates to: RVPRAELLIFLSPRAEPSAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...ACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: GWCHTVCWDQRWFFELLIGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 2 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCAGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 2 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CAGGCACAGGGTGTGATTCTGTCCTTGAAGGATTACTCTCTCTGGAGGACGGCTGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 2 (lower is better)
Translates to: QAQGVILSLKDYSLWRTAAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...AGCCGTCCTCCAGAGAGAGTAATCCTTCAAGGACAGAATCACACCCTGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp ACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGGGGGATATGATGCGGTaGCGGCGGCGCCTCAAGATA +
Preference number: 2 (lower is better)
Translates to: TGGYLLSGDMMRWRRRLKGDMMR*RRRLKI
Trigger: TATCTTGAGGCGCCGCCGCCACCGCATCATATCCCC...CTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 2 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTCATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: PKSQERAGATLSAGISGGHSCKP*QSTGVQ
Trigger: TTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTAGCATGAGGCAACCTTaGCCCAGAAGGTGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLSMRQP*PRRWPS
Trigger: GCTGGGCCACCTTCTGGGTCAAGGTTGCCTCATGCT...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTCCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: EPGKGWCHTVCWDQRWFFPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: DLDWRIFVIWGYDAVAAAEPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...CGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGACTCACCGACTTCCCGTaGTCAGCTGCTGTCAAGCGT +
Preference number: 2 (lower is better)
Translates to: SVCPGLNSLFSFLQGQSRLTDFP*SAAVKR
Trigger: ACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG...TCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCAAGCCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: DNPQGSKYLSQVGGLIASLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...GCTTGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: PRARKGLVPHCLLGSAVVHSCKP*QSTGVQ
Trigger: TTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG...AACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 2 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTTTGGACTGGAGGAGCTaGAGGGGTTTCTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: RVPRAELLIFLSPRAEPSLDWRS*RGFLVS
Trigger: GCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAA...ACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTTTGGACTGGAGGAGCTaGAGGGGTTTCTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSLDWRS*RGFLVS
Trigger: GCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAA...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGGCTGGGGTTTCTGGGTaGGGGGCCAACAGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLAGVSG*GANRVV
Trigger: CACCACTCTGTTGGCCCCCCACCCAGAAACCCCAGC...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCCCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 2 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTTGCCACACTGTCTGCTaGGATCAGCGGTGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: RVPRAELLIFLSPRAEPSCHTVC*DQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCA...ACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 2 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp AGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGCTGGGGTTTCTGGGTaGGGGGCCAACAGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: SCCQAFTFSSVIPHGMRVAGVSG*GANRVV
Trigger: CACCACTCTGTTGGCCCCCCACCCAGAAACCCCAGC...CACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 2 (lower is better)
Translates to: CCQAFTFSSVIPHGMRVVCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp AAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: KSCCSPTSRGQLLSSVHFPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...AAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAAGCATGAGGCAACCTTaGCCCAGAAGGTGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGSMRQP*PRRWPS
Trigger: GCTGGGCCACCTTCTGGGTCAAGGTTGCCTCATGCT...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCACAGCCCCAGAGCCACTaGGCACTGGACAGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: WASYIRVPRAELLIFLSPQPQSH*ALDSQR
Trigger: TCTCTGACTGTCCAGTGCTCAGTGGCTCTGGGGCTG...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR GCA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTA +
Preference number: 2 (lower is better)
Translates to: GWCHTVCWDQRWFFELLILLISV*PGLNSL
Trigger: TAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCACCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGEPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGEPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFMLDLD*RSWRGF
Trigger: GAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCAT...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp ATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: IKTWGSLCAPFFYALVCSVGEWR*TSNTAC
Trigger: GCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCAC...AGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR TCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTTGTTCCCCACCCTTaGACACCATCTCTAGGATGG +
Preference number: 2 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSFVPHP*TPSLGW
Trigger: CCATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAA...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTACGCAGGCCCAGCATaGGGCAACCTTGACCCAGAA +
Preference number: 2 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGYAGPA*GNLDPE
Trigger: TTCTGGGTCAAGGTTGCCTCATGCTGGGCCTGCGTA...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCAGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTCCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCACCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: WASYIRVPRAELLIFLSPPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCTTCCCGTGGTCAGCTaGTGTCAAGCGTTCACTTTC +
Preference number: 2 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPLPVVS*CQAFTF
Trigger: GAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAG...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGACCAGCAACACAGCCTaGAGCAGGTGGAAGGTGGCG +
Preference number: 2 (lower is better)
Translates to: VHSIDFSPNGDNSLCVLETSNTA*SRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGT...CTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp TTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LKPGVASVLLSSMPWFVLGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...CAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: LLSGDMMRWRRRLKIRGWFCHSS*NEGGFV
Trigger: GACAAAACCACCCTCATTCCATGAGGAATGACAGAA...CCAGCCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 2 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 2 (lower is better)
Translates to: SSVHFLFCHSSWNEGGFVGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...GACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTTTGGACTGGAGGAGCTaGAGGGGTTTCTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: AADLGVRLLSWDADVTVALDWRS*RGFLVS
Trigger: GCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAA...AGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLLPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATACGCAGGCCCAGCATaGGGCAACCTTGACCCAGAA +
Preference number: 2 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIYAGPA*GNLDPE
Trigger: TTCTGGGTCAAGGTTGCCTCATGCTGGGCCTGCGTA...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGTGGTGCCACACTGTCTaGTGGGATCAGCGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: VHSIDFSPNGDNSLCVLEWCHTV*WDQRWF
Trigger: GAACCACCGCTGATCCCAGCAGACAGTGTGGCACCA...CTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTCCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAGAAGGTGGCGGTTCCTaGACATACTCGGTACACAGC +
Preference number: 2 (lower is better)
Translates to: WASYIRVPRAELLIFLSPEGGGS*TYSVHS
Trigger: GCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTC...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CAGAGCGGGGTTGCTCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCTGCCACACTGTCTGCTaGGATCAGCGGTGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: QSGVAQFLFQEWAKAVISCHTVC*DQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCA...GCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAACTGAGCAACCCCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp AGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: SCCQAFTFSSVIPHGMRVVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...CACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: WASYIRVPRAELLIFLSPVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCAATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSIRIKT*GSLCAP
Trigger: AGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAG +
Preference number: 2 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLGNPSL*KGLRLE
Trigger: CTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCC...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: HFLFCHSSWNEGGFVFPLLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...AAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTCCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGTCATTCCTCATGGAATaGGGGTGGTTTTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQSFLME*GWFCLP
Trigger: GGGAAGACAAAACCACCCTCATTCCATGAGGAATGA...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp AAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTTGCTCCTTTCTTCTATaGCCTGGTTTGTTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: KSCCSPTSRGQLLSSVHFCSFLL*PGLFCG
Trigger: ACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCA...AAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 2 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTAGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSFCHSS*NEGGFV
Trigger: GACAAAACCACCCTCATTCCATGAGGAATGACAGAA...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 2 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp AAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: KSCCSPTSRGQLLSSVHFTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...AAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: HFLFCHSSWNEGGFVFPLMLDLD*RSWRGF
Trigger: GAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCAT...AAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAG +
Preference number: 2 (lower is better)
Translates to: LKPGVASVLLSSMPWFVLGNPSL*KGLRLE
Trigger: CTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCC...CAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTTCAGCGGTGGTTCTTTaGGCTGCTGATTTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGSAVVL*AADLGV
Trigger: AACACCCAAATCAGCAGCTCAAAGAACCACCGCTGA...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGCAGCAGAAACACAGTaGGGGCTTCTGAAACTCATA +
Preference number: 2 (lower is better)
Translates to: ADLGVRLLSWDADVTVAPAAETQ*GLLKLI
Trigger: TATGAGTTTCAGAAGCCCTCACTGTGTTTCTGCTGC...TGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: FSSVIPHGMRVVLSSRFPALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACTTCCCGTGGTCAGCTaGTGTCAAGCGTTCACTTTC +
Preference number: 2 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLLPVVS*CQAFTF
Trigger: GAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTCTCAGTTTGTTCGTCTaGTTGAAAGTTGGCCAAAAA +
Preference number: 2 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSLSLFV*LKVGQK
Trigger: TTTTTGGCCAACTTTCAAGCAGACGAACAAACTGAG...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTCCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCC +
Preference number: 2 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLPKSEC*KICVYA
Trigger: GGCATAAACACAGATCTTGCAGCATTCACTCTTAGG...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTTGGCCTAAGAGTGAATaGTGCAAGATCTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSWPKSE*CKICVY
Trigger: ATAAACACAGATCTTGCAGCATTCACTCTTAGGCCA...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp TTGCTAGAGAGATATCTGGTGTTTGGGGTTCCATTTTACTCAGGCCAGGCAGGCGCCAATGTAATGCCATaGTGGGAAGAGATGCTCATC +
Preference number: 2 (lower is better)
Translates to: LLERYLVFGVPFYSGQAGANVMP*WEEMLI
Trigger: GATGAGCATCTCTTCCCAGCATGGCATTACATTGGC...GCCTGCCTGGCCTGAGTAAAATGGAACCCCAAACACCAGATATCTCTCTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 2 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGTGCCACACTGTCTGCTaGGATCAGCGGTGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: VHSIDFSPNGDNSLCVLECHTVC*DQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCA...CTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLIRIKT*GSLCAP
Trigger: AGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTTTCTTGTTCCAGGAATaGGCAAAAGCTGTAATAAGC +
Preference number: 2 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSFLFQE*AKAVIS
Trigger: GCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAA...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR TCA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATCAGCGGTGGTTCTTTaGGCTGCTGATTTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVSAVVL*AADLGV
Trigger: AACACCCAAATCAGCAGCTCAAAGAACCACCGCTGA...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGAACCATGACATAGAGTaGGGCAAGGAAGAAGACGAA +
Preference number: 2 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAANHDIE*GKEEDE
Trigger: TTCGTCTTCTTCCTTGCCTCACTCTATGTCATGGTT...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATCCAACTGCAGTAGGATaGATGCAAAGCCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYPTAVG*MQSLHR
Trigger: TCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGG...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR GCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTA +
Preference number: 2 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGLLISV*PGLNSL
Trigger: TAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTTGCTCCTTTCTTCTATaGCCTGGTTTGTTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLCSFLL*PGLFCG
Trigger: ACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCA...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 2 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAARIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 2 (lower is better)
Translates to: CCQAFTFSSVIPHGMRVVCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTG +
Preference number: 2 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQFVLWF*ASYIRV
Trigger: CACACGGATATAAGAAGCCCAGAACCACAGAACAAA...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGCCTTTATTATACAATaGCAACCAAACAAGTACTCC +
Preference number: 2 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLAFIIQ*QPNKYS
Trigger: GGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTAACCATGACATAGAGTaGGGCAAGGAAGAAGACGAA +
Preference number: 2 (lower is better)
Translates to: GLKPGVASVLLSSMPWFVNHDIE*GKEEDE
Trigger: TTCGTCTTCTTCCTTGCCTCACTCTATGTCATGGTT...AACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp TCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: SSVHFLFCHSSWNEGGFVALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...GACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 2 (lower is better)
Translates to: GLKPGVASVLLSSMPWFVRIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...AACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 2 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 2 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTG +
Preference number: 2 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLFVLWF*ASYIRV
Trigger: CACACGGATATAAGAAGCCCAGAACCACAGAACAAA...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGLSSMP*FVLWFW
Trigger: CCAGAACCACAGAACAAACCAGGGCATAGAAGAAAG...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 2 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: LKPGVASVLLSSMPWFVLTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...CAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 2 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVRIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTAAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 2 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVRIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 2 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 2 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLLSSMP*FVLWFW
Trigger: CCAGAACCACAGAACAAACCAGGGCATAGAAGAAAG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATCTCACCGACTTCCCGTaGTCAGCTGCTGTCAAGCGT +
Preference number: 2 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDLTDFP*SAAVKR
Trigger: ACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: HFLFCHSSWNEGGFVFPLTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...AAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATCAGCGGTGGTTCTTTaGGCTGCTGATTTGGGTGTT +
Preference number: 2 (lower is better)
Translates to: HHRRSLYYTMTTKQVLRISAVVL*AADLGV
Trigger: AACACCCAAATCAGCAGCTCAAAGAACCACCGCTGA...TATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CCA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAGAAAAGGACTTAGACTaGAGGATATTTGTTATCTGG +
Preference number: 2 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIEKDLD*RIFVIW
Trigger: CCAGATAACAAATATCCTCCAGTCTAAGTCCTTTTC...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCC +
Preference number: 2 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRPKSEC*KICVYA
Trigger: GGCATAAACACAGATCTTGCAGCATTCACTCTTAGG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR TCA 90 bp CATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATAACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: HHRRSLYYTMTTKQVLRITLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...TATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCTCAGTTTGTTCGTCTaGTTGAAAGTTGGCCAAAAA +
Preference number: 2 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRLSLFV*LKVGQK
Trigger: TTTTTGGCCAACTTTCAAGCAGACGAACAAACTGAG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR GCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGTGGCCTAAGAGTGAATaGTGCAAGATCTGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRWPKSE*CKICVY
Trigger: ATAAACACAGATCTTGCAGCATTCACTCTTAGGCCA...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp CTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGGAGTaGAGGTGGACCAGCAACACAGCCTGCAGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LLCSCARGLVGE*RWTSNTACSRW
Trigger: CCACCTGCTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: QPKSQERAGATLSAGISGRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTC +
Preference number: 3 (lower is better)
Translates to: PPPLPAQEPGKG*CHTVCWDQRWF
Trigger: GAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp GGAGCCAGAAGCTATTATGCAGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGACCAGCAACACAGCCT +
Preference number: 3 (lower is better)
Translates to: GARSYYAAVPAG*WGSGGGPATQP
Trigger: AGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCTTCTGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGAAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: PTSSPRARKGLVPHCLLGSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...TCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp ACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 3 (lower is better)
Translates to: TSSPRARKGLVPHCLLGSSWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...TGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGAGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: PTSSPRARKGLVPHCLLGGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...TCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 72 bp CCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGATCAGCGGTGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: PPLPAQEPGKGW*HTVCWDQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCLGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 72 bp GCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTaGTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATT +
Preference number: 3 (lower is better)
Translates to: AQEPGKGWCHTV*WDQRWFFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: CCSPTSRGQLLSSVHFLFGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...GAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CAGGCACAGGGTGTGATTCTGTCCTTGAAGGATTACTCTCTCTGGAGGACGGCTGAGGCCAGAGCGGGGTaGCTCAGTTCTTGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: QAQGVILSLKDYSLWRTAEARAG*LSSCSR
Trigger: CCTGGAACAAGAACTGAGCAACCCCGCTCTGGCCTC...AGCCGTCCTCCAGAGAGAGTAATCCTTCAAGGACAGAATCACACCCTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp TTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGCGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: LKPGVASVLLSSMPWFVLRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...CAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: GWCHTVCWDQRWFFELLILGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTCGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp GAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTTTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 3 (lower is better)
Translates to: EPGKGWCHTVCWDQRWFFFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp ACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: TGGYLLSGDMMRWRRRLKLGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...CTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCCTTCTATGCCCTGGTTaGTTCTGTGGTTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: CCSPTSRGQLLSSVHFLFLLCPG*FCGSGL
Trigger: AAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG...GAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTGTCTTCCCGCTTCCCTaGACCTCAAAATCAGGATTA +
Preference number: 3 (lower is better)
Translates to: GWCHTVCWDQRWFFELLIVFPLP*TSKSGL
Trigger: TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGAC...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 3 (lower is better)
Translates to: CCQAFTFSSVIPHGMRVVSWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp GGCCAGAGCGGGGTTGCTCAGTTCTTGTTCCAGGAATaGGCAAAAGCTGTAATAAGCACCAACTGCAGTAGG +
Preference number: 3 (lower is better)
Translates to: GQSGVAQFLFQE*AKAVISTNCSR
Trigger: CCTACTGCAGTTGGTGCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAACTGAGCAACCCCGCTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp AAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: KSCCSPTSRGQLLSSVHFLGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...AAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCGTCTTCCCGCTTCCCTaGACCTCAAAATCAGGATTA +
Preference number: 3 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVVFPLP*TSKSGL
Trigger: TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGAC...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGACCACCCCTTTGCCCTTaGTCTGCCTCCACTGTTTCA +
Preference number: 3 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGPPLCP*SASTVS
Trigger: TGAAACAGTGGAGGCAGACAAAGGGCAAAGGGGTGG...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCACCACCCCTTTGCCCTTaGTCTGCCTCCACTGTTTCA +
Preference number: 3 (lower is better)
Translates to: WASYIRVPRAELLIFLSPPPLCP*SASTVS
Trigger: TGAAACAGTGGAGGCAGACAAAGGGCAAAGGGGTGG...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp CTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTC +
Preference number: 3 (lower is better)
Translates to: LLSSMPWFVLWF*ASYIRVPRAEL
Trigger: GAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp CCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGT +
Preference number: 3 (lower is better)
Translates to: PGVASVLLSSMP*FVLWFWASYIR
Trigger: ACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp CCCGCTTCCCTTGACCTCAAAATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTG +
Preference number: 3 (lower is better)
Translates to: PASLDLKIRIKT*GSLCAPFFYAL
Trigger: CAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGATTTTGAGGTCAAGGGAAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGACACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: SVCPGLNSLFSFLQGQSRHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...TCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTTTTTGTTCCCCACCCTaGAACACCATCTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPFCSPP*NTISRM
Trigger: CATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAAA...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 72 bp AAAAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTaGTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCT +
Preference number: 3 (lower is better)
Translates to: KNPAAHRLPVVS*CQAFTFSSVIP
Trigger: AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp TGTGAAAAGGACTTAGACTGGAGGATATTTGTTATCTaGGGATATGATGCGGTGGCGGCGGCGCCTCAAGAT +
Preference number: 3 (lower is better)
Translates to: CEKDLDWRIFVI*GYDAVAAAPQD
Trigger: ATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 3 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTAGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR TCA 72 bp ACAGTGAGGGCTTCTGAAACTCATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAAATACCTCAGCCAGGT +
Preference number: 3 (lower is better)
Translates to: TVRASETHSCKP*QSTGVQIPQPG
Trigger: ACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAGTTTCAGAAGCCCTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CCA 72 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: LSSVHFLFCHSS*NEGGFVFPLPL
Trigger: CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGTTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 3 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLILGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp AGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 3 (lower is better)
Translates to: RRSLYYTMTTKQVLRICSSWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...ACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp AGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGAACAGGAACAGCAGCTaGAGGAGCCAGAAGCTATTA +
Preference number: 3 (lower is better)
Translates to: SCCQAFTFSSVIPHGMRVNRNSS*RSQKLL
Trigger: TAATAGCTTCTGGCTCCTCAAGCTGCTGTTCCTGTT...CACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAGGGGTTGCTCAGTTCTaGTTCCAGGAATGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIGVAQF*FQEWAK
Trigger: TTTTGCCCATTCCTGGAACAAGAACTGAGCAACCCC...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTTTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 3 (lower is better)
Translates to: GLKPGVASVLLSSMPWFVFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...AACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGCTTCTATGCCCTGGTTaGTTCTGTGGTTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVLLCPG*FCGSGL
Trigger: AAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTTTTTGTTCCCCACCCTaGAACACCATCTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCFCSPP*NTISRM
Trigger: CATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAAA...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 72 bp TTCCAGGAATGGGCAAAAGCTGTAATAAGCACCAACTaGAGTAGGATGAATGCAAAGCCTCCACAGATGCCA +
Preference number: 3 (lower is better)
Translates to: FQEWAKAVISTN*SRMNAKPPQMP
Trigger: TGGCATCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGGTGCTTATTACAGCTTTTGCCCATTCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
3UTR TCA 72 bp GAGTCAGACACTCTGCCCAGCACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCATAGTATTGACTTCAGC +
Preference number: 3 (lower is better)
Translates to: ESDTLPSTLDCV*PLLPVHSIDFS
Trigger: GCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTGCTGGGCAGAGTGTCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 72 bp TTGAAGGATTACTCTCTCTGGAGGACGGCTGGACAGTaGAGAGAAAGTCAGATACATGATATAGCAGCTGAT +
Preference number: 3 (lower is better)
Translates to: LKDYSLWRTAGQ*RESQIHDIAAD
Trigger: ATCAGCTGCTATATCATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCTCCAGAGAGAGTAATCCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
3UTR-3UTR CAA 90 bp TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: CCQAFTFSSVIPHGMRVVHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR GCA 72 bp CCATCTCTAGGATGGAGTTGGCCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCCTCTTTTCCTCATTCT +
Preference number: 3 (lower is better)
Translates to: PSLGWSWPKSEC*KICVYASFPHS
Trigger: AGAATGAGGAAAAGAGGCATAAACACAGATCTTGCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp TCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: SSVHFLFCHSSWNEGGFVHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...GACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR TCA 72 bp ACTCTAGGAGTACAATGTCAGGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAGGATATTTGTTATCTG +
Preference number: 3 (lower is better)
Translates to: TLGVQCQGNPSL*KGLRLEDICYL
Trigger: CAGATAACAAATATCCTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCCCTGACATTGTACTCCTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR-3UTR CAA 90 bp CATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 3 (lower is better)
Translates to: HHRRSLYYTMTTKQVLRIFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...TATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.6
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCCCAGCGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ANRVVPVTAPDRGVRRPSAVPAG*WGSGGG
Trigger: TCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGC...GCTGGGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: PHPHFQPKSQERAGATLSCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...AGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGGAGAGGCCAAACAGGTaGGCACACAACCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLERPNR*AHNPEG
Trigger: GCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTC...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCGCAGCAGGTGGAAGGTaGCGGTTCCTGCACATACTC +
Preference number: 4 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCAAGGR*RFLHIL
Trigger: GAGTATGTGCAGGAACCGCCACCTTCCACCTGCTGC...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSAVPAG*WGSGGG
Trigger: TCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGC...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGEPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTAGCATGAGGCAACCTTaGCCCAGAAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRARKGLVPHCLLGSAVVSMRQP*PRRWPS
Trigger: GCTGGGCCACCTTCTGGGTCAAGGTTGCCTCATGCT...AACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: QERAGATLSAGISGGSLSGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...GCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: EPGKGWCHTVCWDQRWFFGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCTCACCGACTTCCCGTaGTCAGCTGCTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGLTDFP*SAAVKR
Trigger: ACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFAVPAG*WGSGGG
Trigger: TCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGC...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCCCAGCGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ANRVVPVTAPDRGVRRPSGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...GCTGGGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCCTGTGTGTGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: REAKQVGTQPRGHLDPVCEPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...ACACACAGGATCCAGATGCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CCA 90 bp CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCTCACCGACTTCCCGTaGTCAGCTGCTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: PLPAQEPGKGWCHTVCWDLTDFP*SAAVKR
Trigger: ACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG...ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKGWCHTVCWDQRWFFELLPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...CAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTTTGTTCCCCACCCTTaGACACCATCTCTAGGATGG +
Preference number: 4 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCFVPHP*TPSLGW
Trigger: CCATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAA...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCAGCGGGGTTGCTCCACTaGGGCGGATGCAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSAGLLH*GGCKER
Trigger: TCGCTCCTTGCATCCGCCTCAGTGGAGCAACCCCGC...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448553.5
CDS-3UTR GCA 90 bp GAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTTCACTAGGACACTGCTaGCTCCGCTGTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EPGKGWCHTVCWDQRWFFSLGHC*LRCAAV
Trigger: CACAGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGA...AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp CGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTGCGGCTGCAAGTGGATaGGGTGAGAGAGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RVPRAELLIFLSPRAEPSAAASG*GERGPP
Trigger: AGGTGGCCCTCTCTCACCGCATCCACTTGCAGCCGC...ACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATGAAGGTGGCGGTTCCTaGACATACTCGGTACACAGC +
Preference number: 4 (lower is better)
Translates to: PLPAQEPGKGWCHTVCWDEGGGS*TYSVHS
Trigger: GCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTC...ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCGCTATTATGCAGCTGTaGCCGCGGGCTGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVAIMQL*PRAGGG
Trigger: TCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGC...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGTGGTGCCACACTGTCTaGTGGGATCAGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKGWCHTVCWDQRWFFELWCHTV*WDQRWF
Trigger: GAACCACCGCTGATCCCAGCAGACAGTGTGGCACCA...CAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGGAGAGGCCAAACAGGTaGGCACACAACCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPERPNR*AHNPEG
Trigger: GCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTC...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGGCAGCAGGTGGAAGGTaGCGGTTCCTGCACATACTC +
Preference number: 4 (lower is better)
Translates to: LLSGDMMRWRRRLKIRGWAAGGR*RFLHIL
Trigger: GAGTATGTGCAGGAACCGCCACCTTCCACCTGCTGC...CCAGCCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RVPRAELLIFLSPRAEPSAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...ACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGCTGGGGTTTCTGGGTaGGGGGCCAACAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSAGVSG*GANRVV
Trigger: CACCACTCTGTTGGCCCCCCACCCAGAAACCCCAGC...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTTCTCTGGAGGACGGCTaGACAGTGCAGAGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGSLEDG*TVQRKS
Trigger: TGACTTTCTCTGCACTGTCCAGCCGTCCTCCAGAGA...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCAGCCCCAGAGCCACTaGGCACTGGACAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSQPQSH*ALDSQR
Trigger: TCTCTGACTGTCCAGTGCTCAGTGGCTCTGGGGCTG...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTTGGAGAGGAAGGAGATaGGGCCACAGAAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: PRARKGLVPHCLLGSAVVWRGRR*GHRSKG
Trigger: ACCTTTGCTTCTGTGGCCTCATCTCCTTCCTCTCCA...AACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp TGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: CCSPTSRGQLLSSVHFLFAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...GAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCAGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCCTGTGTGTATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: REAKQVGTQPRGHLDPVCMLDLD*RSWRGF
Trigger: GAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCAT...ACACACAGGATCCAGATGCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CCA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGCTGGGGTTTCTGGGTaGGGGGCCAACAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLAGVSG*GANRVV
Trigger: CACCACTCTGTTGGCCCCCCACCCAGAAACCCCAGC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: EPGKGWCHTVCWDQRWFFVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLIRIKT*GSLCAP
Trigger: AGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCAAGGCAGCGAGGTaGAGACTTGCTGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: QERAGATLSAGISGGSLSCKAAR*RLADRR
Trigger: CCTTCTGTCAGCAAGTCTCCACCTCGCTGCCTTGCA...GCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR TCA 90 bp GGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCAGATGGAAGGCAGATaGGAGCAGCAGTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKGWCHTVCWDQRWFFELQMEGR*EQQLLL
Trigger: CAGAAGCAACTGCTGCTCTCATCTGCCTTCCATCTG...CAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR TCA 90 bp CCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGACATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PTSSPRARKGLVPHCLLGHSCKP*QSTGVQ
Trigger: TTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG...TCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCAACCATGACATAGAGTaGGGCAAGGAAGAAGACGAA +
Preference number: 4 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCNHDIE*GKEEDE
Trigger: TTCGTCTTCTTCCTTGCCTCACTCTATGTCATGGTT...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GGCCAGGCAGGCACAGGGTGTGATTCTGTCCTTGAAGGATTACTCTCTCTGGAGTACGCAGGCCCAGCATaGGGCAACCTTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: GQAGTGCDSVLEGLLSLEYAGPA*GNLDPE
Trigger: TTCTGGGTCAAGGTTGCCTCATGCTGGGCCTGCGTA...CTCCAGAGAGAGTAATCCTTCAAGGACAGAATCACACCCTGTGCCTGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR TCA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSLPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTGCGGCTGCAAGTGGATaGGGTGAGAGAGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASAAASG*GERGPP
Trigger: AGGTGGCCCTCTCTCACCGCATCCACTTGCAGCCGC...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGCCAGAAGCTATTATaGAGCTGTGCCCGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPSQKLL*SCARGL
Trigger: CAGCCCGCGGGCACAGCTGCATAATAGCTTCTGGCT...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp AGCAGGTGGAAGGTGGCGGTTCCTGCACATACTCGGTACACAGCCCCAGAGCCAGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRWKVAVPAHTRYTAPEPALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...TGGCTCTGGGGCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTCCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR GCA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: PKSQERAGATLSAGISGGLLISV*PGLNSL
Trigger: TAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAGGCTGGGGCCGGCCTTaGCACCCACCATCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGGWGRP*HPPSLS
Trigger: GGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCC...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPVGEWR*TSNTAC
Trigger: GCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCAC...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTAAGCAGGCAGCCAGCTaGGTGTGTATAATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PKSQERAGATLSAGISGGKQAAS*VCIIVE
Trigger: TTCCACTATTATACACACCCAGCTGGCTGCCTGCTT...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTGCTGGGGTTTCTGGGTaGGGGGCCAACAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPAGVSG*GANRVV
Trigger: CACCACTCTGTTGGCCCCCCACCCAGAAACCCCAGC...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGGGGGATATGATGCGGTaGCGGCGGCGCCTCAAGATA +
Preference number: 4 (lower is better)
Translates to: IFVIWGYDAVAAAPQDKGGDMMR*RRRLKI
Trigger: TATCTTGAGGCGCCGCCGCCACCGCATCATATCCCC...CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATAT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DLDWRIFVIWGYDAVAAALPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...CGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp AGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCCTGTGTGTTCAGCGGTGGTTCTTTaGGCTGCTGATTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: REAKQVGTQPRGHLDPVCSAVVL*AADLGV
Trigger: AACACCCAAATCAGCAGCTCAAAGAACCACCGCTGA...ACACACAGGATCCAGATGCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR TCA 90 bp CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATTCATTCCTCATGGAATaGGGGTGGTTTTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLPAQEPGKGWCHTVCWDSFLME*GWFCLP
Trigger: GGGAAGACAAAACCACCCTCATTCCATGAGGAATGA...ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTTCATTCCTCATGGAATaGGGGTGGTTTTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PRARKGLVPHCLLGSAVVSFLME*GWFCLP
Trigger: GGGAAGACAAAACCACCCTCATTCCATGAGGAATGA...AACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCTCAGCCCATTGGACTaGCACTGTGTTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: DLDWRIFVIWGYDAVAAALSPLD*HCVGAE
Trigger: CTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAG...CGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACTGCTGCCTCCGCTGTaGTGCTGTGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLLLPPL*CCARPR
Trigger: CCTGGGCCTGGCACAGCAGCACAGCGGAGGCAGCAG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTCTGCTGCCTCCGCTGTaGTGCTGTGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCLLPPL*CCARPR
Trigger: CCTGGGCCTGGCACAGCAGCACAGCGGAGGCAGCAG...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTGAAGGTGGCGGTTCCTaGACATACTCGGTACACAGC +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSEGGGS*TYSVHS
Trigger: GCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTC...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QERAGATLSAGISGGSLSALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...GCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCACCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGAGAGGCCAAACAGGTaGGCACACAACCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAAERPNR*AHNPEG
Trigger: GCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTC...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTTGTAGAATCCTAGGGTaGCCAGCAGGACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSCRILG*PAGQPG
Trigger: TCCTGGCTGTCCTGCTGGCCACCCTAGGATTCTACA...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CCA 90 bp ACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGTTGGACTGGAGGAGCTaGAGGGGTTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TGGYLLSGDMMRWRRRLKLDWRS*RGFLVS
Trigger: GCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAA...CTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGGGGGATATGATGCGGTaGCGGCGGCGCCTCAAGATA +
Preference number: 4 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQGDMMR*RRRLKI
Trigger: TATCTTGAGGCGCCGCCGCCACCGCATCATATCCCC...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PKSQERAGATLSAGISGGRIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QPKSQERAGATLSAGISGLSSMP*FVLWFW
Trigger: CCAGAACCACAGAACAAACCAGGGCATAGAAGAAAG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCTTCCACTACTGTCCTTaGCAGCAGGAGGCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVFHYCP*QQEAAD
Trigger: ATCTGCTGCCTCCTGCTGTCAAGGACAGTAGTGGAA...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCTGGAGAGGAAGGAGATaGGGCCACAGAAGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVWRGRR*GHRSKG
Trigger: ACCTTTGCTTCTGTGGCCTCATCTCCTTCCTCTCCA...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR TCA 90 bp GAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGCAGCAGAAACACAGTaGGGGCTTCTGAAACTCATA +
Preference number: 4 (lower is better)
Translates to: EPGKGWCHTVCWDQRWFFAAETQ*GLLKLI
Trigger: TATGAGTTTCAGAAGCCCTCACTGTGTTTCTGCTGC...AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAAGCATGAGGCAACCTTaGCCCAGAAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPSMRQP*PRRWPS
Trigger: GCTGGGCCACCTTCTGGGTCAAGGTTGCCTCATGCT...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGTACGCAGGCCCAGCATaGGGCAACCTTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQYAGPA*GNLDPE
Trigger: TTCTGGGTCAAGGTTGCCTCATGCTGGGCCTGCGTA...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTGTTATCTGGGGATATaGTGCGGTGGCGGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGCYLGI*CGGGGA
Trigger: GGCGCCGCCGCCACCGCATCATATCCCCAGATAACA...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGACCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SVCPGLNSLFSFLQGQSRPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...TCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCAAGCCCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DNPQGSKYLSQVGGLIASPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...GCTTGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAACCAGCAACACAGCCTaGAGCAGGTGGAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPTSNTA*SRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGT...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTGCTATTATGCAGCTGTaGCCGCGGGCTGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVAIMQL*PRAGGG
Trigger: TCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGC...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCCAATGTAATGCCATaGTGGGAAGAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: TSSPRARKGLVPHCLLGSANVMP*WEEMLI
Trigger: GATGAGCATCTCTTCCCAGCATGGCATTACATTGGC...TGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCGTAATAAGCACCAACTaGAGTAGGATGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: PPPLPAQEPGKGWCHTVCVISTN*SRMNAK
Trigger: CTTTGCATTCATCCTACTGCAGTTGGTGCTTATTAC...GCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCCCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTTGGTGCCACACTGTCTaGTGGGATCAGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPWCHTV*WDQRWF
Trigger: GAACCACCGCTGATCCCAGCAGACAGTGTGGCACCA...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGCTGTCCTCAGCCCATTaGACTGCCACTGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQLSSAH*TATVLG
Trigger: CCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAG...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTGCAGCAGGTGGAAGGTaGCGGTTCCTGCACATACTC +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPAAGGR*RFLHIL
Trigger: GAGTATGTGCAGGAACCGCCACCTTCCACCTGCTGC...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SCCQAFTFSSVIPHGMRVVGEWR*TSNTAC
Trigger: GCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCAC...CACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTGGGGATATGATGCGGTaGCGGCGGCGCCTCAAGATA +
Preference number: 4 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLGDMMR*RRRLKI
Trigger: TATCTTGAGGCGCCGCCGCCACCGCATCATATCCCC...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PLPAQEPGKGWCHTVCWDRIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGCCCCAGAGCCACTaGGCACTGGACAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGQPQSH*ALDSQR
Trigger: TCTCTGACTGTCCAGTGCTCAGTGGCTCTGGGGCTG...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTCCAACTGCAGTAGGATaGATGCAAAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSPTAVG*MQSLHR
Trigger: TCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGG...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTGCAGCAGAAACACAGTaGGGGCTTCTGAAACTCATA +
Preference number: 4 (lower is better)
Translates to: GWCHTVCWDQRWFFELLIAAETQ*GLLKLI
Trigger: TATGAGTTTCAGAAGCCCTCACTGTGTTTCTGCTGC...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTAGCATGAGGCAACCTTaGCCCAGAAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVSMRQP*PRRWPS
Trigger: GCTGGGCCACCTTCTGGGTCAAGGTTGCCTCATGCT...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: AHRLPVVSCCQAFTFSSVGNPSL*KGLRLE
Trigger: CTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCC...GACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGCTCCCTGTGTGTCCTTaGGGTATTGAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAALPVCP*GIELGW
Trigger: CCAGCCCAGCTCAATACCTCAAGGACACACAGGGAG...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTTTTGTTCCCCACCCTTaGACACCATCTCTAGGATGG +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSFVPHP*TPSLGW
Trigger: CCATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAA...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAACCAGCAACACAGCCTaGAGCAGGTGGAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGTSNTA*SRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGT...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGGCTATTATGCAGCTGTaGCCGCGGGCTGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRAIMQL*PRAGGG
Trigger: TCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGC...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGCTCCCACACCTGCCATaGTGTAGAATCCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRLPHLP*CRILGW
Trigger: CCACCCTAGGATTCTACAGCATGGCAGGTGTGGGAG...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp GACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCAAGCGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DNPQGSKYLSQVGGLIASALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...GCTTGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTCTCAGTTTGTTCGTCTaGTTGAAAGTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PKSQERAGATLSAGISGGLSLFV*LKVGQK
Trigger: TTTTTGGCCAACTTTCAAGCAGACGAACAAACTGAG...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTGCAGCAGGTGGAAGGTaGCGGTTCCTGCACATACTC +
Preference number: 4 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLAAGGR*RFLHIL
Trigger: GAGTATGTGCAGGAACCGCCACCTTCCACCTGCTGC...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYVGEWR*TSNTAC
Trigger: GCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCAC...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRVGEWR*TSNTAC
Trigger: GCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCAC...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCGGTTTCTTGGTCAGCTaGCCTCGCAGCCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LKLIAVNLDNPQGSKYLSGFLVS*PRSPTP
Trigger: AGGGGTGGGGCTGCGAGGCCAGCTGACCAAGAAACC...GCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTGCTGGAGGGGTTTCTTaGTCAGCTGGCCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: HFLFCHSSWNEGGFVFPLAGGVS*SAGLAA
Trigger: GGCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGC...AAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAGCTGGGGTTTCTGGGTaGGGGGCCAACAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLAGVSG*GANRVV
Trigger: CACCACTCTGTTGGCCCCCCACCCAGAAACCCCAGC...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGGGGATATGATGCGGTaGCGGCGGCGCCTCAAGATA +
Preference number: 4 (lower is better)
Translates to: SCCQAFTFSSVIPHGMRVGDMMR*RRRLKI
Trigger: TATCTTGAGGCGCCGCCGCCACCGCATCATATCCCC...CACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ADLGVRLLSWDADVTVAPGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...TGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PRARKGLVPHCLLGSAVVFVLWF*ASYIRV
Trigger: CACACGGATATAAGAAGCCCAGAACCACAGAACAAA...AACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
3UTR CAA 72 bp AAGGCAATAGCACAGAGACCTAACAGGAACAGCAGCTaGAGGAGCCAGAAGCTATTATGCAGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: KAIAQRPNRNSS*RSQKLLCSCAR
Trigger: GCGGGCACAGCTGCATAATAGCTTCTGGCTCCTCAAGCTGCTGTTCCTGTTAGGTCTCTGTGCTATTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR TCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCCACAGCAGCACACCTaGCAGAAGGGACTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPPQQHT*QKGLFT
Trigger: AGTGAAAAGTCCCTTCTGTCAGGTGTGCTGCTGTGG...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299969.10
CDS-3UTR TCA 90 bp CTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGCCCCAGAGCCACTaGGCACTGGACAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LKLIAVNLDNPQGSKYLSQPQSH*ALDSQR
Trigger: TCTCTGACTGTCCAGTGCTCAGTGGCTCTGGGGCTG...GCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTCATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSHSCKP*QSTGVQ
Trigger: TTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTACGCAGGCCCAGCATaGGGCAACCTTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: FSSVIPHGMRVVLSSRFPYAGPA*GNLDPE
Trigger: TTCTGGGTCAAGGTTGCCTCATGCTGGGCCTGCGTA...AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTATACGCAGGCCCAGCATaGGGCAACCTTGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LIAVNLDNPQGSKYLSQVYAGPA*GNLDPE
Trigger: TTCTGGGTCAAGGTTGCCTCATGCTGGGCCTGCGTA...TACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCCCAGCACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ANRVVPVTAPDRGVRRPSTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...GCTGGGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGTCATTCCTCATGGAATaGGGGTGGTTTTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPSFLME*GWFCLP
Trigger: GGGAAGACAAAACCACCCTCATTCCATGAGGAATGA...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp AAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTTTTGTTCCCCACCCTTaGACACCATCTCTAGGATGG +
Preference number: 4 (lower is better)
Translates to: KSCCSPTSRGQLLSSVHFFVPHP*TPSLGW
Trigger: CCATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAA...AAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGGCTATTATGCAGCTGTaGCCGCGGGCTGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVAIMQL*PRAGGG
Trigger: TCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGC...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCAAGCCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: DNPQGSKYLSQVGGLIASLLISV*PGLNSL
Trigger: TAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG...GCTTGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGAATGCCATGCTATTATaGAGCTGTGCCCGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLNAMLL*SCARGL
Trigger: CAGCCCGCGGGCACAGCTGCATAATAGCATGGCATT...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412697.1
CDS-3UTR CCA 90 bp GGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTAATGTAATGCCATGCTaGGAAGAGATGCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GWCHTVCWDQRWFFELLINVMPC*EEMLIR
Trigger: CCTGATGAGCATCTCTTCCCAGCATGGCATTACATT...AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTAAGCAGGCAGCCAGCTaGGTGTGTATAATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSKQAAS*VCIIVE
Trigger: TTCCACTATTATACACACCCAGCTGGCTGCCTGCTT...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CCA 90 bp GCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: AADLGVRLLSWDADVTVAMLDLD*RSWRGF
Trigger: GAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCAT...AGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTTGCCACACTGTCTGCTaGGATCAGCGGTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPCHTVC*DQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCA...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLREPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCCACTGTGTTGGGGCTaGGCACCCGGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRPLCWG*APGPGQ
Trigger: CTGCCCGGGACCGGGTGCTCAGCCCCAACACAGTGG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299969.10
CDS-3UTR TCA 90 bp CAGAGCGGGGTTGCTCAGTTCTTGTTCCAGGAATGGGCAAAAGCTGTAATAAGCCAGATGGAAGGCAGATaGGAGCAGCAGTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QSGVAQFLFQEWAKAVISQMEGR*EQQLLL
Trigger: CAGAAGCAACTGCTGCTCTCATCTGCCTTCCATCTG...GCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAACTGAGCAACCCCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR TCA 90 bp CAGGCACAGGGTGTGATTCTGTCCTTGAAGGATTACTCTCTCTGGAGGACGGCTCATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: QAQGVILSLKDYSLWRTAHSCKP*QSTGVQ
Trigger: TTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG...AGCCGTCCTCCAGAGAGAGTAATCCTTCAAGGACAGAATCACACCCTGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR TCA 90 bp TGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCAACCATGACATAGAGTaGGGCAAGGAAGAAGACGAA +
Preference number: 4 (lower is better)
Translates to: CCSPTSRGQLLSSVHFLFNHDIE*GKEEDE
Trigger: TTCGTCTTCTTCCTTGCCTCACTCTATGTCATGGTT...GAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCCCAGCGCCTTTATTATACAATaGCAACCAAACAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: ANRVVPVTAPDRGVRRPSAFIIQ*QPNKYS
Trigger: GGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGC...GCTGGGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTTCACTAGGACACTGCTaGCTCCGCTGTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: IKTWGSLCAPFFYALVCSSLGHC*LRCAAV
Trigger: CACAGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGA...AGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGGGATCCTGTGTGTCTTaGCCCACACCCTTTCCACTA +
Preference number: 4 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLGSCVS*PTPFPL
Trigger: TAGTGGAAAGGGTGTGGGGCAAGACACACAGGATCC...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATACCAGCAACACAGCCTaGAGCAGGTGGAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYTSNTA*SRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGT...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGACCAGCAACACAGCCTaGAGCAGGTGGAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVTSNTA*SRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGT...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCAGCCAGAAGCTATTATaGAGCTGTGCCCGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVSQKLL*SCARGL
Trigger: CAGCCCGCGGGCACAGCTGCATAATAGCTTCTGGCT...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTAGCCAGAAGCTATTATaGAGCTGTGCCCGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCSQKLL*SCARGL
Trigger: CAGCCCGCGGGCACAGCTGCATAATAGCTTCTGGCT...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGCAGCCCCACCCCTTTaGCCTTTGTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFAAPPL*PLSAST
Trigger: AGTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGC...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCGCTCTTGAGCTGGGATaGAGATGTAACAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFALELG*RCNSSS
Trigger: GGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGC...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCTGGTGCCACACTGTCTaGTGGGATCAGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVWCHTV*WDQRWF
Trigger: GAACCACCGCTGATCCCAGCAGACAGTGTGGCACCA...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTGGTGCCACACTGTCTaGTGGGATCAGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRWCHTV*WDQRWF
Trigger: GAACCACCGCTGATCCCAGCAGACAGTGTGGCACCA...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGTGCTCCTTTCTTCTATaGCCTGGTTTGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPCSFLL*PGLFCG
Trigger: ACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCA...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCAAGCTGCTCCTTTCTTCTATaGCCTGGTTTGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DNPQGSKYLSQVGGLIASCSFLL*PGLFCG
Trigger: ACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCA...GCTTGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCTTCCCGTGGTCAGCTaGTGTCAAGCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: AADLGVRLLSWDADVTVALPVVS*CQAFTF
Trigger: GAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAG...AGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGTGGCCTAAGAGTGAATaGTGCAAGATCTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GKGWCHTVCWDQRWFFELWPKSE*CKICVY
Trigger: ATAAACACAGATCTTGCAGCATTCACTCTTAGGCCA...CAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGGCCTAAGAGTGAATaGTGCAAGATCTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: QERAGATLSAGISGGSLSWPKSE*CKICVY
Trigger: ATAAACACAGATCTTGCAGCATTCACTCTTAGGCCA...GCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RRSLYYTMTTKQVLRICSAVPAG*WGSGGG
Trigger: TCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGC...ACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTAATGTAATGCCATGCTaGGAAGAGATGCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSNVMPC*EEMLIR
Trigger: CCTGATGAGCATCTCTTCCCAGCATGGCATTACATT...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTTGGACTGGAGGAGCTaGAGGGGTTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVLDWRS*RGFLVS
Trigger: GCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAA...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTAGGATATTTGTTATCTaGGGATATGATGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSRIFVI*GYDAVA
Trigger: CGCCACCGCATCATATCCCCAGATAACAAATATCCT...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCGGTATTGAGCTGGGCTaGACAGCTCCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVGIELG*TAPLEP
Trigger: TGGCTCAAGGGGAGCTGTCCAGCCCAGCTCAATACC...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 4 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTGTCTTCAGTCCCTGTTaGTCTTTCCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: GLKPGVASVLLSSMPWFVVFSPC*SFPTPT
Trigger: AGTGGGGGTGGGGAAAGACCAACAGGGACTGAAGAC...AACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSLSSMP*FVLWFW
Trigger: CCAGAACCACAGAACAAACCAGGGCATAGAAGAAAG...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGTCTCTGGAGGACGGCTaGACAGTGCAGAGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAASLEDG*TVQRKS
Trigger: TGACTTTCTCTGCACTGTCCAGCCGTCCTCCAGAGA...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTAAGGATTACTCTCTCTaGAGGACGGCTGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLKDYSL*RTAGQC
Trigger: GCACTGTCCAGCCGTCCTCCAGAGAGAGTAATCCTT...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAACTGCAGTAGGATaGATGCAAAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: AADLGVRLLSWDADVTVAPTAVG*MQSLHR
Trigger: TCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGG...AGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPGNPSL*KGLRLE
Trigger: CTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCC...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTACTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTCTGGACAGCTCCCCTTaGGCCAACTCTAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: IKTWGSLCAPFFYALVCSLDSSP*ANSRST
Trigger: TGTACTCCTAGAGTTGGCTCAAGGGGAGCTGTCCAG...AGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTTCAGCGGTGGTTCTTTaGGCTGCTGATTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLSAVVL*AADLGV
Trigger: AACACCCAAATCAGCAGCTCAAAGAACCACCGCTGA...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp GCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCATTTGTTCCCCACCCTTaGACACCATCTCTAGGATGG +
Preference number: 4 (lower is better)
Translates to: ADLGVRLLSWDADVTVAPFVPHP*TPSLGW
Trigger: CCATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAA...TGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGAAGGTGGCGGTTCCTaGACATACTCGGTACACAGC +
Preference number: 4 (lower is better)
Translates to: VHSIDFSPNGDNSLCVLEEGGGS*TYSVHS
Trigger: GCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTC...CTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCACCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WASYIRVPRAELLIFLSPPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTACCTTTGCCCTTTGTCTaGCTCCACTGTTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LIAVNLDNPQGSKYLSQVPLPFV*LHCFRA
Trigger: TGCCCTGAAACAGTGGAGGCAGACAAAGGGCAAAGG...TACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRLLISV*PGLNSL
Trigger: TAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTAGGACGGCTGGACAGTaGAGAGAAAGTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASRTAGQ*RESQIH
Trigger: ATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCT...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGAGGACGGCTGGACAGTaGAGAGAAAGTCAGATACAT +
Preference number: 4 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRRTAGQ*RESQIH
Trigger: ATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCT...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCGCCAATGTAATGCCATaGTATTATGCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFANVMP*YYAAVP
Trigger: GGGCACAGCTGCATAATAGCATGGCATTACATTGGC...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412697.1
CDS-3UTR CCA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATGGCTGGGGCCGGCCTTaGCACCCACCATCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDGWGRP*HPPSLS
Trigger: GGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCC...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIMLDLD*RSWRGF
Trigger: GAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCAT...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGATGCTGGACTTGGACTaGAGGAGCTGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRMLDLD*RSWRGF
Trigger: GAAACCCCTCCAGCTCCTCCAGTCCAAGTCCAGCAT...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASIRIKT*GSLCAP
Trigger: AGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSFCHSS*NEGGFV
Trigger: GACAAAACCACCCTCATTCCATGAGGAATGACAGAA...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGCTCACCGACTTCCCGTaGTCAGCTGCTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVLTDFP*SAAVKR
Trigger: ACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATCTCACCGACTTCCCGTaGTCAGCTGCTGTCAAGCGT +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYLTDFP*SAAVKR
Trigger: ACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: IFVIWGYDAVAAAPQDKGTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCACCAACTGCAGTAGGATaGATGCAAAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: WASYIRVPRAELLIFLSPPTAVG*MQSLHR
Trigger: TCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGG...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGCAGCAGAAACACAGTaGGGGCTTCTGAAACTCATA +
Preference number: 4 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPAAETQ*GLLKLI
Trigger: TATGAGTTTCAGAAGCCCTCACTGTGTTTCTGCTGC...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCTTTTCACTAGGACACTaGTGCCTCCGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVFSLGH*CLRCAA
Trigger: AGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGAAAA...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAGGATCCTGTGTGTCTTaGCCCACACCCTTTCCACTA +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLGSCVS*PTPFPL
Trigger: TAGTGGAAAGGGTGTGGGGCAAGACACACAGGATCC...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGCTTCTTATATCCGTGTaGCCAGGGCTGAACTCCTTA +
Preference number: 4 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAALLISV*PGLNSL
Trigger: TAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGTGCTCCTTTCTTCTATaGCCTGGTTTGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQCSFLL*PGLFCG
Trigger: ACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCA...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTACTTCCCGTGGTCAGCTaGTGTCAAGCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVLPVVS*CQAFTF
Trigger: GAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAG...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCACCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCC +
Preference number: 4 (lower is better)
Translates to: LTDFPWSAAVKRSLSLLSPKSEC*KICVYA
Trigger: GGCATAAACACAGATCTTGCAGCATTCACTCTTAGG...TGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTTTCTTGTTCCAGGAATaGGCAAAAGCTGTAATAAGC +
Preference number: 4 (lower is better)
Translates to: RVPRAELLIFLSPRAEPSFLFQE*AKAVIS
Trigger: GCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAA...ACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGTTCTTGTTCCAGGAATaGGCAAAAGCTGTAATAAGC +
Preference number: 4 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPFLFQE*AKAVIS
Trigger: GCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAA...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCTGCCACACTGTCTGCTaGGATCAGCGGTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVCHTVC*DQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCA...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCAAGGATTACTCTCTCTaGAGGACGGCTGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVKDYSL*RTAGQC
Trigger: GCACTGTCCAGCCGTCCTCCAGAGAGAGTAATCCTT...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTCCAACTGCAGTAGGATaGATGCAAAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: CCQAFTFSSVIPHGMRVVPTAVG*MQSLHR
Trigger: TCTGTGGAGGCTTTGCATTCATCCTACTGCAGTTGG...AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTCATAGCTGTAAACCTTaGCAATCCACAGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVHSCKP*QSTGVQ
Trigger: TTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATG...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGAACCATGACATAGAGTaGGGCAAGGAAGAAGACGAA +
Preference number: 4 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLNHDIE*GKEEDE
Trigger: TTCGTCTTCTTCCTTGCCTCACTCTATGTCATGGTT...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: IKTWGSLCAPFFYALVCSGNPSL*KGLRLE
Trigger: CTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCC...AGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CAGGGGTCCAAATACCTCAGCCAGGTAGGAGGCCTCATTGCAAGCAAAAAGCACACATTAGACTGTGTTTaGCCACTTCTTCCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QGSKYLSQVGGLIASKKHTLDCV*PLLPVH
Trigger: ATGAACTGGAAGAAGTGGTCAAACACAGTCTAATGT...GTGCTTTTTGCTTGCAATGAGGCCTCCTACCTGGCTGAGGTATTTGGACCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCTCAGCGGTGGTTCTTTaGGCTGCTGATTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LKLIAVNLDNPQGSKYLSSAVVL*AADLGV
Trigger: AACACCCAAATCAGCAGCTCAAAGAACCACCGCTGA...GCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGTCATTCCTCATGGAATaGGGGTGGTTTTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGSFLME*GWFCLP
Trigger: GGGAAGACAAAACCACCCTCATTCCATGAGGAATGA...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAGATGAGAGCAGCAGTTaGTTCTGTCCTCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIDESSS*FCPQPI
Trigger: AATGGGCTGAGGACAGAAGCAACTGCTGCTCTCATC...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGCCAATGTAATGCCATaGTGGGAAGAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGANVMP*WEEMLI
Trigger: GATGAGCATCTCTTCCCAGCATGGCATTACATTGGC...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGGTAATAAGCACCAACTaGAGTAGGATGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: IFVIWGYDAVAAAPQDKGVISTN*SRMNAK
Trigger: CTTTGCATTCATCCTACTGCAGTTGGTGCTTATTAC...CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGGCTACAGTCTTGAGCTaGACCTGTCTGCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRATVLS*TCLPVL
Trigger: AAGAACTGGCAGACAGGTGCAGCTCAAGACTGTAGC...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCCACAGAAGCAAAGGTaGAGACTGAGGAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVPQKQR*RLRSIL
Trigger: CAAGATGCTCCTCAGTCTGCACCTTTGCTTCTGTGG...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTCCACAGAAGCAAAGGTaGAGACTGAGGAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCPQKQR*RLRSIL
Trigger: CAAGATGCTCCTCAGTCTGCACCTTTGCTTCTGTGG...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATCTTCCCGTGGTCAGCTaGTGTCAAGCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYLPVVS*CQAFTF
Trigger: GAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAG...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCCCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCC +
Preference number: 4 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFPKSEC*KICVYA
Trigger: GGCATAAACACAGATCTTGCAGCATTCACTCTTAGG...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTGGTAGGAGGCCTCATTaGAGTTCTTGTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVGRRPH*SSCSRN
Trigger: ATTCCTGGAACAAGAACTGCAATGAGGCCTCCTACC...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412697.1
CDS-3UTR CCA 90 bp CACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTTGCTGGGATCAGCGGTaGTTCTTTGAGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: HFLFCHSSWNEGGFVFPLCWDQR*FFELLI
Trigger: AATCAGCAGCTCAAAGAACCACCGCTGATCCCAGCA...AAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTGCCACACTGTCTGCTaGGATCAGCGGTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVCHTVC*DQRWFF
Trigger: AAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCA...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: RLPVVSCCQAFTFSSVIPFVLWF*ASYIRV
Trigger: CACACGGATATAAGAAGCCCAGAACCACAGAACAAA...AGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGTCTCTAGGATGGAGTTaGCCTAAGAGTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: SCCQAFTFSSVIPHGMRVSLGWS*PKSECC
Trigger: GCAGCATTCACTCTTAGGCCAACTCCATCCTAGAGA...CACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGCAGCAGAAACACAGTaGGGGCTTCTGAAACTCATA +
Preference number: 4 (lower is better)
Translates to: IKTWGSLCAPFFYALVCSAAETQ*GLLKLI
Trigger: TATGAGTTTCAGAAGCCCTCACTGTGTTTCTGCTGC...AGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTAACCATGACATAGAGTaGGGCAAGGAAGAAGACGAA +
Preference number: 4 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGNHDIE*GKEEDE
Trigger: TTCGTCTTCTTCCTTGCCTCACTCTATGTCATGGTT...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp AGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGCATGAGGCAACCTTaGCCCAGAAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRSLYYTMTTKQVLRICSSMRQP*PRRWPS
Trigger: GCTGGGCCACCTTCTGGGTCAAGGTTGCCTCATGCT...ACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGGGGAACCCCAGTTTGTaGAAAGGACTTAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVGNPSL*KGLRLE
Trigger: CTCCAGTCTAAGTCCTTTTCACAAACTGGGGTTCCC...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCGCCAATGTAATGCCATaGTGGGAAGAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVANVMP*WEEMLI
Trigger: GATGAGCATCTCTTCCCAGCATGGCATTACATTGGC...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGGCTACAGTCTTGAGCTaGACCTGTCTGCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVATVLS*TCLPVL
Trigger: AAGAACTGGCAGACAGGTGCAGCTCAAGACTGTAGC...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCATGCTCCTTTCTTCTATaGCCTGGTTTGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: WASYIRVPRAELLIFLSPCSFLL*PGLFCG
Trigger: ACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCA...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAGGTAGGAGGCCTCATTaGAAGCAAAAAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLGRRPH*KQKAHK
Trigger: CTTGTGTGCTTTTTGCTTGCAATGAGGCCTCCTACC...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGACAAAGCCTCCACAGATaGCAATGTAATGCCATGCTA +
Preference number: 4 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGQSLHR*QCNAML
Trigger: TAGCATGGCATTACATTGGCATCTGTGGAGGCTTTG...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412697.1
CDS-3UTR CCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCGGTCCCGGGCAGAATaGAGACGTCCGGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRRSRAE*RRPEEN
Trigger: GTTCTCTTCCGGACGTCTCCATTCTGCCCGGGACCG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299969.10
CDS-3UTR CCA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGAAAAGGACTTAGACTaGAGGATATTTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLEKDLD*RIFVIW
Trigger: CCAGATAACAAATATCCTCCAGTCTAAGTCCTTTTC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGGAGCCAGGAAAGGGCTaGTGCCACACTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLREPGKG*CHTVCW
Trigger: CCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTC...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLKPGVASVLLSSMPWFVLSSMP*FVLWFW
Trigger: CCAGAACCACAGAACAAACCAGGGCATAGAAGAAAG...AACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCTCAGCCCATTGGACTaGCACTGTGTTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRLSPLD*HCVGAE
Trigger: CTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp AGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTCCAGGAAAGGGCTGGTaGCACACTGTCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RRSLYYTMTTKQVLRICSPGKGW*HTVCWD
Trigger: ATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGG...ACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGACCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCC +
Preference number: 4 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGPKSEC*KICVYA
Trigger: GGCATAAACACAGATCTTGCAGCATTCACTCTTAGG...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCCTAAGAGTGAATGCTaGAAGATCTGTGTTTATGCC +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGPKSEC*KICVYA
Trigger: GGCATAAACACAGATCTTGCAGCATTCACTCTTAGG...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGGTAGGAGGCCTCATTaGAAGCAAAAAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFGRRPH*KQKAHK
Trigger: CTTGTGTGCTTTTTGCTTGCAATGAGGCCTCCTACC...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATACTGTCCTCAGCCCATTaGACTGCCACTGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HHRRSLYYTMTTKQVLRILSSAH*TATVLG
Trigger: CCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAG...TATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CCA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTGAAAAGGACTTAGACTaGAGGATATTTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASEKDLD*RIFVIW
Trigger: CCAGATAACAAATATCCTCCAGTCTAAGTCCTTTTC...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 4 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: FSSVIPHGMRVVLSSRFPFVLWF*ASYIRV
Trigger: CACACGGATATAAGAAGCCCAGAACCACAGAACAAA...AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFIRIKT*GSLCAP
Trigger: AGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATATCAGGATTAAAACCTaGGGTAGCCTCTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYIRIKT*GSLCAP
Trigger: AGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGFCHSS*NEGGFV
Trigger: GACAAAACCACCCTCATTCCATGAGGAATGACAGAA...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PFFYALVCSVVLGFLYPCTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...ACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTGCCTTTATTATACAATaGCAACCAAACAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLAFIIQ*QPNKYS
Trigger: GGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGC...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATAGAAGGTGGCGGTTCCTaGACATACTCGGTACACAGC +
Preference number: 4 (lower is better)
Translates to: HHRRSLYYTMTTKQVLRIEGGGS*TYSVHS
Trigger: GCTGTGTACCGAGTATGTGCAGGAACCGCCACCTTC...TATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGTAATAAGCACCAACTaGAGTAGGATGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGVISTN*SRMNAK
Trigger: CTTTGCATTCATCCTACTGCAGTTGGTGCTTATTAC...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGGTAATAAGCACCAACTaGAGTAGGATGAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGVISTN*SRMNAK
Trigger: CTTTGCATTCATCCTACTGCAGTTGGTGCTTATTAC...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCTCCCACACCTGCCATaGTGTAGAATCCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRLPHLP*CRILGW
Trigger: CCACCCTAGGATTCTACAGCATGGCAGGTGTGGGAG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR GCA 90 bp TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTCTCAGTTTGTTCGTCTaGTTGAAAGTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: FSSVIPHGMRVVLSSRFPLSLFV*LKVGQK
Trigger: TTTTTGGCCAACTTTCAAGCAGACGAACAAACTGAG...AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATGGCCTAAGAGTGAATaGTGCAAGATCTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGWPKSE*CKICVY
Trigger: ATAAACACAGATCTTGCAGCATTCACTCTTAGGCCA...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGAATGTAATGCCATGCTaGGAAGAGATGCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVNVMPC*EEMLIR
Trigger: CCTGATGAGCATCTCTTCCCAGCATGGCATTACATT...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTTCTTGTTCCAGGAATaGGCAAAAGCTGTAATAAGC +
Preference number: 4 (lower is better)
Translates to: LKPGVASVLLSSMPWFVLFLFQE*AKAVIS
Trigger: GCTTATTACAGCTTTTGCCCATTCCTGGAACAAGAA...CAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp AGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTTTGGACTGGAGGAGCTaGAGGGGTTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRSLYYTMTTKQVLRICSLDWRS*RGFLVS
Trigger: GCTGACCAAGAAACCCCTCCAGCTCCTCCAGTCCAA...ACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGGAAAAGGACTTAGACTaGAGGATATTTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLEKDLD*RIFVIW
Trigger: CCAGATAACAAATATCCTCCAGTCTAAGTCCTTTTC...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTTAGGCTCTTGAGCTaGGATGCAGATGTAACAGTA +
Preference number: 4 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFVRLLS*DADVTV
Trigger: TACTGTTACATCTGCATCCCAGCTCAAGAGCCTAAC...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTATTTGTTCTGTGGTTCTaGGCTTCTTATATCCGTGTG +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLFVLWF*ASYIRV
Trigger: CACACGGATATAAGAAGCCCAGAACCACAGAACAAA...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATCTTTCTTCTATGCCCTaGTTTGTTCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYLSSMP*FVLWFW
Trigger: CCAGAACCACAGAACAAACCAGGGCATAGAAGAAAG...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYFCHSS*NEGGFV
Trigger: GACAAAACCACCCTCATTCCATGAGGAATGACAGAA...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCTTCTGTCATTCCTCATaGAATGAGGGTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVFCHSS*NEGGFV
Trigger: GACAAAACCACCCTCATTCCATGAGGAATGACAGAA...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CCA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTACACCATCTCTAGGATaGAGTTGGCCTAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFTPSLG*SWPKSE
Trigger: TTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGT...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATCCGTGTGCCCAGGGCTaGACTCCTTATTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDPCAQG*TPYFPF
Trigger: GAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGG...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR TCA 90 bp CTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGGCCTTTATTATACAATaGCAACCAAACAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: LLISVCPGLNSLFSFLQGAFIIQ*QPNKYS
Trigger: GGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGC...CCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATTTTTCACTAGGACACTaGTGCCTCCGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDFSLGH*CLRCAA
Trigger: AGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGAAAA...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR GCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTACTCAGTTTGTTCGTCTaGTTGAAAGTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLLSLFV*LKVGQK
Trigger: TTTTTGGCCAACTTTCAAGCAGACGAACAAACTGAG...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTATGGCCTAAGAGTGAATaGTGCAAGATCTGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLWPKSE*CKICVY
Trigger: ATAAACACAGATCTTGCAGCATTCACTCTTAGGCCA...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR GCA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATCTCAGTTTGTTCGTCTaGTTGAAAGTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYLSLFV*LKVGQK
Trigger: TTTTTGGCCAACTTTCAAGCAGACGAACAAACTGAG...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS GCA 90 bp CACAGCAGCACACCTGACAGAAGGGACTTTTCACTAGGACACTGCTaGCTCCGCTGTGCTGCTGTGCCAGGCCCAGGGAGGTGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: HSSTPDRRDFSLGHC*LRCAAVPGPGRCRG
Trigger: GCCCCGGCACCTCCCTGGGCCTGGCACAGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGAAAAGTCCCTTCTGTCAGGTGTGCTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS-3UTR CAA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGGCAGGAGGCAGCAGATaGCTGAGGCCCCCACATGGA +
Preference number: 5 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLAGGSR*LRPPHG
Trigger: TCCATGTGGGGGCCTCAGCAATCTGCTGCCTCCTGC...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS GCA 90 bp AGGTGGAGACTTGCTGACAGAAGGGACTTTTCACTAGGACACTGCTaGCTCCGCTGTGCTGCTGTGCCAGGCCCAGGGAGGTGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: RWRLADRRDFSLGHC*LRCAAVPGPGRCRG
Trigger: GCCCCGGCACCTCCCTGGGCCTGGCACAGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGAAAAGTCCCTTCTGTCAGCAAGTCTCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS CCA 90 bp ATGCTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGGAGTGGAGGTaGACCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCGGTTCCT +
Preference number: 5 (lower is better)
Translates to: MLLCSCARGLVGEWR*TSNTACSRWKVAVP
Trigger: AGGAACCGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412697.1
ENST00000476490.1
CDS CCA 90 bp AATGCCATGCTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGGAGTaGAGGTGGACCAGCAACACAGCCTGCAGCAGGTGGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: NAMLLCSCARGLVGE*RWTSNTACSRWKVA
Trigger: CGCCACCTTCCACCTGCTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCATGGCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412697.1
ENST00000476490.1
CDS-3UTR CAA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: PKSQERAGATLSAGISGGSWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCCGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: QERAGATLSAGISGGSLSRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...GCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GKGWCHTVCWDQRWFFELRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...CAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp AGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCCTGTGTGTGCAGGAGGCAGCAGATaGCTGAGGCCCCCACATGGA +
Preference number: 5 (lower is better)
Translates to: REAKQVGTQPRGHLDPVCAGGSR*LRPPHG
Trigger: TCCATGTGGGGGCCTCAGCAATCTGCTGCCTCCTGC...ACACACAGGATCCAGATGCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS TCA 90 bp AGTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTaGGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: SCFCPQPIGLPLCWG*APGPGQNGDVRKRT
Trigger: TGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS CCA 90 bp GATGCCAATGTAATGCCATGCTATTATGCAGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGACCAGCAACACAGCCTGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: DANVMPCYYAAVPAG*WGSGGGPATQPAAG
Trigger: ACCTGCTGCAGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCATGGCATTACATTGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412697.1
ENST00000476490.1
CDS-3UTR CAA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCCACCCCTTTGCCCTTaGTCTGCCTCCACTGTTTCA +
Preference number: 5 (lower is better)
Translates to: QPKSQERAGATLSAGISGPPLCP*SASTVS
Trigger: TGAAACAGTGGAGGCAGACAAAGGGCAAAGGGGTGG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTGGGCTGGGGCCGGCCTaGGCACCCACCATCCTTGTC +
Preference number: 5 (lower is better)
Translates to: PLCSFLLCPGLFCGSGLLGLGPA*APTILV
Trigger: GACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCC...AAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CAA 90 bp AAGGCAATAGCACAGAGACCTAACAGGAACAGCAGCTTGAGGAGCCAGAAGCTAGGGCTGGGGCCGGCCTaGGCACCCACCATCCTTGTC +
Preference number: 5 (lower is better)
Translates to: KAIAQRPNRNSSLRSQKLGLGPA*APTILV
Trigger: GACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCC...TAGCTTCTGGCTCCTCAAGCTGCTGTTCCTGTTAGGTCTCTGTGCTATTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CAA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTAGACTGAGGAGCATCTaGTTAAGCAGGCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: QPKSQERAGATLSAGISGRLRSI*LSRQPA
Trigger: AGCTGGCTGCCTGCTTAACAAGATGCTCCTCAGTCT...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CAA 90 bp AGAGAGGCCAAACAGGTGGGCACACAACCCCGAGGGCATCTGGATCCTGTGTGTGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: REAKQVGTQPRGHLDPVCGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...ACACACAGGATCCAGATGCCCTCGGGGTTGTGTGCCCACCTGTTTGGCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CAA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 5 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLLGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: TSSPRARKGLVPHCLLGSSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...TGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS TCA 90 bp GAGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTaGCCTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: EHPVPGRMETSGREH*PPGCGKCKCPVKEL
Trigger: AAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGACCGGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319327.7
CDS CCA 90 bp ATAGGAGCACAGCTCCCACACCTGCCATGCTGTAGAATCCTAGGGTaGCCAGCAGGACAGCCAGGAACCAGCTACAGTCTTGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: IGAQLPHLPCCRILG*PAGQPGTSYSLELH
Trigger: GTGCAGCTCAAGACTGTAGCTGGTTCCTGGCTGTCCTGCTGGCCACCCTAGGATTCTACAGCATGGCAGGTGTGGGAGCTGTGCTCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000448553.5
ENST00000476490.1
CDS-3UTR CAA 90 bp CAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTCCTGTCTGCCAGTTCTaGTTCCAGGAATGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: QPKSQERAGATLSAGISGPVCQF*FQEWAK
Trigger: TTTTGCCCATTCCTGGAACAAGAACTGGCAGACAGG...ACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CAA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGCGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGAGGCCAGAGCGGGGTaGCTCAGTTCTTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: AAHRLPVVSCCQAFTFSSEARAG*LSSCSR
Trigger: CCTGGAACAAGAACTGAGCAACCCCGCTCTGGCCTC...AGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CAA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFSWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: IRVPRAELLIFLSPRAEPGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: TGGYLLSGDMMRWRRRLKSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...CTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCCCAGCCTTCTATGCCCTGGTTaGTTCTGTGGTTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: ANRVVPVTAPDRGVRRPSLLCPG*FCGSGL
Trigger: AAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG...GCTGGGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS GCA 90 bp GGTGTGTATAATAGTGGAATAGGAGCACAGCTCCCACACCTGCCATaGTGTAGAATCCTAGGGTGGCCAGCAGGACAGCCAGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: GVYNSGIGAQLPHLP*CRILGWPAGQPGTS
Trigger: GCTGGTTCCTGGCTGTCCTGCTGGCCACCCTAGGATTCTACAGCATGGCAGGTGTGGGAGCTGTGCTCCTATTCCACTATTATACACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000448553.5
ENST00000476490.1
CDS CCA 90 bp GCACCCACCATCCTTGTCCCAGGGATTAGGCTTAGGTCCACCAGATaGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTCCTCAGCCCATT +
Preference number: 5 (lower is better)
Translates to: APTILVPGIRLRSTR*KADESSSCFCPQPI
Trigger: AATGGGCTGAGGACAGAAGCAACTGCTGCTCTCATCTGCCTTCCATCTGGTGGACCTAAGCCTAATCCCTGGGACAAGGATGGTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS-3UTR CAA 90 bp TGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCACGCAGCCCCACCCCTTaGCCCTTTGTCTGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: WASYIRVPRAELLIFLSPRSPTP*PFVCLH
Trigger: GTGGAGGCAGACAAAGGGCAAAGGGGTGGGGCTGCG...TGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: IFVIWGYDAVAAAPQDKGGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 5 (lower is better)
Translates to: PKSQERAGATLSAGISGGFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...ACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: PTPTSSPRARKGLVPHCLHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 5 (lower is better)
Translates to: GKGWCHTVCWDQRWFFELLGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...CAGCTCAAAGAACCACCGCTGATCCCAGCAGACAGTGTGGCACCAGCCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS TCA 90 bp GAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTaGAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: EENTDLQVAVNANAL*RSFVLRASTLRPLR
Trigger: CCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319327.7
CDS-3UTR CAA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGTCTGTCCTCAGCCCATaGGACTGCCACTGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRSVLSP*DCHCVG
Trigger: CCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGA...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CAA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGAACCAGCTACAGTCTaGAGCTGCACCTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLEPATV*SCTCLP
Trigger: TGGCAGACAGGTGCAGCTCAAGACTGTAGCTGGTTC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CAA 90 bp GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTGGAAAGATGCTGGACTaGGACTGGAGGAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: ASVLLSSMPWFVLWFWASGKMLD*DWRSWR
Trigger: CCTCCAGCTCCTCCAGTCCAAGTCCAGCATCTTTCC...AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTGGACTGCCACTGTGTaGGGGCTGAGCACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVWTATV*GLSTRS
Trigger: GGACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCA...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299969.10
CDS-3UTR CAA 90 bp GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGGAACCAGCTACAGTCTaGAGCTGCACCTGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GVRLLSWDADVTVAPVSQEPATV*SCTCLP
Trigger: TGGCAGACAGGTGCAGCTCAAGACTGTAGCTGGTTC...CTGACTCACTGGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CAA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGCCACCCCTTTGCCCTTaGTCTGCCTCCACTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRPPLCP*SASTVS
Trigger: TGAAACAGTGGAGGCAGACAAAGGGCAAAGGGGTGG...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLISWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GGCCAGGCAGGCACAGGGTGTGATTCTGTCCTTGAAGGATTACTCTCTCTGGAGTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 5 (lower is better)
Translates to: GQAGTGCDSVLEGLLSLELGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...CTCCAGAGAGAGTAATCCTTCAAGGACAGAATCACACCCTGTGCCTGCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CAA 90 bp CTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: LFCHSSWNEGGFVFPLPLSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...CAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCACCCCTTTGCCCTTaGTCTGCCTCCACTGTTTCA +
Preference number: 5 (lower is better)
Translates to: AADLGVRLLSWDADVTVAPPLCP*SASTVS
Trigger: TGAAACAGTGGAGGCAGACAAAGGGCAAAGGGGTGG...AGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCACCACCCCTTTGCCCTTaGTCTGCCTCCACTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPPPLCP*SASTVS
Trigger: TGAAACAGTGGAGGCAGACAAAGGGCAAAGGGGTGG...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGAGCTGGAGGGGTTTCTaGGTCAGCTGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: FFQFIVLTSAQTEITPCVSWRGF*VSWPRS
Trigger: GCTGCGAGGCCAGCTGACCAAGAAACCCCTCCAGCT...CACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCTTCTATGCCCTGGTTaGTTCTGTGGTTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: DLDWRIFVIWGYDAVAAALLCPG*FCGSGL
Trigger: AAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG...CGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGATTTTGTTCCCCACCCTaGAACACCATCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: SVCPGLNSLFSFLQGQSRFCSPP*NTISRM
Trigger: CATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAAA...TCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS GCA 90 bp ATCCAGGTCCTGTCCCTTACCTCTCTCTGGAGGACGGCTGGACAGTaGAGAGAAAGTCAGATACATGATATAGCAGCTGATGACAGAAGC +
Preference number: 5 (lower is better)
Translates to: IQVLSLTSLWRTAGQ*RESQIHDIAADDRS
Trigger: GCTTCTGTCATCAGCTGCTATATCATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCTCCAGAGAGAGGTAAGGGACAGGACCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476490.1
CDS-3UTR CAA 90 bp TGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTATCTGTCCTCAGCCCATaGGACTGCCACTGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: WNEGGFVFPLPLTSKSGLSVLSP*DCHCVG
Trigger: CCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGA...TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CAA 90 bp ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGGAACAGGAACAGCAGCTaGAGGAGCCAGAAGCTATTA +
Preference number: 5 (lower is better)
Translates to: IFVIWGYDAVAAAPQDKGNRNSS*RSQKLL
Trigger: TAATAGCTTCTGGCTCCTCAAGCTGCTGTTCCTGTT...CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp AGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCCTTCTATGCCCTGGTTaGTTCTGTGGTTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SLCAPFFYALVCSVVLGFLLCPG*FCGSGL
Trigger: AAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG...GAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTGTCTTCCCGCTTCCCTaGACCTCAAAATCAGGATTA +
Preference number: 5 (lower is better)
Translates to: VPRAELLIFLSPRAEPSLVFPLP*TSKSGL
Trigger: TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGAC...AAGACTCGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGTTTTGTTCCCCACCCTaGAACACCATCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: DLDWRIFVIWGYDAVAAAFCSPP*NTISRM
Trigger: CATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAAA...CGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGAACAGGAACAGCAGCTaGAGGAGCCAGAAGCTATTA +
Preference number: 5 (lower is better)
Translates to: SMPWFVLWFWASYIRVPRNRNSS*RSQKLL
Trigger: TAATAGCTTCTGGCTCCTCAAGCTGCTGTTCCTGTT...CCTGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp GGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTAGACTGAGGAGCATCTaGTTAAGCAGGCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: GLKPGVASVLLSSMPWFVRLRSI*LSRQPA
Trigger: AGCTGGCTGCCTGCTTAACAAGATGCTCCTCAGTCT...AACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CAA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTAGAGATATCTGGTGTTaGGGGTTCCATTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: ILLLTDFPWSAAVKRSLSRDIWC*GFHFTQ
Trigger: CTGAGTAAAATGGAACCCCAAACACCAGATATCTCT...AGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTGGATCCTGTGTGTCTaGCCCCACACCCTTTCCACT +
Preference number: 5 (lower is better)
Translates to: SSVHFLFCHSSWNEGGFVWILCV*PHTLST
Trigger: AGTGGAAAGGGTGTGGGGCAAGACACACAGGATCCA...GACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CAA 90 bp ATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATTGGATCCTGTGTGTCTaGCCCCACACCCTTTCCACT +
Preference number: 5 (lower is better)
Translates to: IVLTSAQTEITPCVSLRYWILCV*PHTLST
Trigger: AGTGGAAAGGGTGTGGGGCAAGACACACAGGATCCA...ATACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000457418.5
CDS-3UTR CAA 90 bp AAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGAACAGGAACAGCAGCTaGAGGAGCCAGAAGCTATTA +
Preference number: 5 (lower is better)
Translates to: KDLDWRIFVIWGYDAVAANRNSS*RSQKLL
Trigger: TAATAGCTTCTGGCTCCTCAAGCTGCTGTTCCTGTT...CGCCGCCACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LPVHSIDFSPNGDNSLCVVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...GACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATGTGGCCCAGCTACCCTaGATGAAGGTCTTTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYVAQLP*MKVFSS
Trigger: ACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCAC...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp AAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KSCCSPTSRGQLLSSVHFHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...AAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTGGGTGTTAGGCTCTaGAGCTGGGATGCAGATGTA +
Preference number: 5 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGLGVRL*SWDADV
Trigger: TACATCTGCATCCCAGCTCAAGAGCCTAACACCCAA...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTCTTCTATGCCCTGGTTaGTTCTGTGGTTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: QLLSSVHFLFCHSSWNEGLLCPG*FCGSGL
Trigger: AAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG...ACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTACAGCGAGGTGGAGACTaGCTGACAGAAGGGACTTTT +
Preference number: 5 (lower is better)
Translates to: HSIDFSPNGDNSLCVLEVQRGGD*LTEGTF
Trigger: AAAAGTCCCTTCTGTCAGCAAGTCTCCACCTCGCTG...TACCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CAA 90 bp ATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTGGGGTTGCTCAGTTCTaGTTCCAGGAATGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: IRIKTWGSLCAPFFYALVGVAQF*FQEWAK
Trigger: TTTTGCCCATTCCTGGAACAAGAACTGAGCAACCCC...AACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457418.5
CDS-3UTR CAA 90 bp CTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCATTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 5 (lower is better)
Translates to: LLCPGLFCGSGLLISVCPFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...TGGGCACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTTGTTCCCCACCCTaGAACACCATCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LLSSVHFLFCHSSWNEGGFCSPP*NTISRM
Trigger: CATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAAA...ACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAGCCTCATTGCAGTTCTaGTTCCAGGAATGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SWNEGGFVFPLPLTSKSGASLQF*FQEWAK
Trigger: TTTTGCCCATTCCTGGAACAAGAACTGCAATGAGGC...TCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412697.1
CDS-3UTR CAA 90 bp GCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: AADLGVRLLSWDADVTVAHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...AGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGGTCTTCCCGCTTCCCTaGACCTCAAAATCAGGATTA +
Preference number: 5 (lower is better)
Translates to: FIVLTSAQTEITPCVSLRVFPLP*TSKSGL
Trigger: TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGAC...CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAGTCTTCCCGCTTCCCTaGACCTCAAAATCAGGATTA +
Preference number: 5 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIVFPLP*TSKSGL
Trigger: TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGAC...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTTTTTGTTCCCCACCCTaGAACACCATCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: IKTWGSLCAPFFYALVCSFCSPP*NTISRM
Trigger: CATCCTAGAGATGGTGTTCAAGGGTGGGGAACAAAA...AGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATAGGTGTGATTCTGTCCTaGAAGGATTACTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LCSFLLCPGLFCGSGLLIGVILS*KDYSLW
Trigger: CCAGAGAGAGTAATCCTTCAAGGACAGAATCACACC...TATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGAAACTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCGGTGTGATTCTGTCCTaGAAGGATTACTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LKLIAVNLDNPQGSKYLSGVILS*KDYSLW
Trigger: CCAGAGAGAGTAATCCTTCAAGGACAGAATCACACC...GCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp TCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATTTCCAGTTCATAGTATaGACTTCAGCCCAAACGGAG +
Preference number: 5 (lower is better)
Translates to: SVLLSSMPWFVLWFWASYFQFIV*TSAQTE
Trigger: CTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAA...ATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATAGTCTTCAGTCCCTGTaGGTCTTTCCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDSLQSL*VFPHPH
Trigger: GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACT...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTCATAGCTGTAAACCTTGACAATCCACAGGGGTCCAAATACCTCAGCCAGGTAAGAGATATCTGGTGTTaGGGGTTCCATTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: LIAVNLDNPQGSKYLSQVRDIWC*GFHFTQ
Trigger: CTGAGTAAAATGGAACCCCAAACACCAGATATCTCT...TACCTGGCTGAGGTATTTGGACCCCTGTGGATTGTCAAGGTTTACAGCTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp CTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTCACATTAGACTGTGTTaGACCACTTCTTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: LSSVHFLFCHSSWNEGGFHIRLC*TTSSSS
Trigger: TGAACTGGAAGAAGTGGTCAAACACAGTCTAATGTG...AAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000412697.1
ENST00000448553.5
ENST00000457418.5
CDS-3UTR CAA 90 bp AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGCCTGTCTGCCAGTTCTaGTTCCAGGAATGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: KHHRRSLYYTMTTKQVLRPVCQF*FQEWAK
Trigger: TTTTGCCCATTCCTGGAACAAGAACTGGCAGACAGG...CCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000448553.5
CDS-3UTR CAA 90 bp ACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATGTCTTCCCGCTTCCCTaGACCTCAAAATCAGGATTA +
Preference number: 5 (lower is better)
Translates to: TSQKKPLLYNDNQTSTPDVFPLP*TSKSGL
Trigger: TAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGAC...ATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000448553.5
ENST00000457418.5
CDS TCA 72 bp TGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTaGGCACCCGGTCCCGGGCAGAATGGAGACGTCCGG +
Preference number: 6 (lower is better)
Translates to: CPQPIGLPLCWG*APGPGQNGDVR
Trigger: CCGGACGTCTCCATTCTGCCCGGGACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS GCA 72 bp AAGGGACTTTTCACTAGGACACTGCTGCCTCCGCTGTaGTGCTGTGCCAGGCCCAGGGAGGTGCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: KGLFTRTLLPPL*CCARPREVPGL
Trigger: CAGCCCCGGCACCTCCCTGGGCCTGGCACAGCAGCACAGCGGAGGCAGCAGTGTCCTAGTGAAAAGTCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS GCA 72 bp AGAGCAGCAGTTGCTTCTGTCCTCAGCCCATTGGACTaGCACTGTGTTGGGGCTGAGCACCCGGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: RAAVASVLSPLD*HCVGAEHPVPG
Trigger: GCCCGGGACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAACTGCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS CAA 90 bp GAGCAGCAGTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTaGGGGCTGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAA +
Preference number: 6 (lower is better)
Translates to: EQQLLLSSAHWTATV*GLSTRSRAEWRRPE
Trigger: TTCCGGACGTCTCCATTCTGCCCGGGACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAACTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS CCA 72 bp GTAATGCCATGCTATTATGCAGCTGTGCCCGCGGGCTaGTGGGGGAGTGGAGGTGGACCAGCAACACAGCCT +
Preference number: 6 (lower is better)
Translates to: VMPCYYAAVPAG*WGSGGGPATQP
Trigger: AGGCTGTGTTGCTGGTCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTGCATAATAGCATGGCATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412697.1
ENST00000476490.1
CDS CAA 72 bp TTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTaGGGGCTGAGCACCCGGTCCCGGGCAGAATGGAGA +
Preference number: 6 (lower is better)
Translates to: LLLSSAHWTATV*GLSTRSRAEWR
Trigger: TCTCCATTCTGCCCGGGACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS CAA 90 bp CCCACACCCTTTCCACTACTGTCCTTGACAGCAGGAGGCAGCAGATaGCTGAGGCCCCCACATGGAGGAGGATGTAGAACAGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: PTPFPLLSLTAGGSR*LRPPHGGGCRTGGC
Trigger: GCAGCCGCCTGTTCTACATCCTCCTCCATGTGGGGGCCTCAGCAATCTGCTGCCTCCTGCTGTCAAGGACAGTAGTGGAAAGGGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS GCA 72 bp ATGGAGGAGGATGTAGAACAGGCGGCTGCAAGTGGATaGGGTGAGAGAGGGCCACCTAGAGTGGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: MEEDVEQAAASG*GERGPPRVAAA
Trigger: AGCTGCTGCCACTCTAGGTGGCCCTCTCTCACCGCATCCACTTGCAGCCGCCTGTTCTACATCCTCCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS CAA 72 bp CAGATGAGAGCAGCAGTTGCTTCTGTCCTCAGCCCATaGGACTGCCACTGTGTTGGGGCTGAGCACCCGGTC +
Preference number: 6 (lower is better)
Translates to: QMRAAVASVLSP*DCHCVGAEHPV
Trigger: GACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAACTGCTGCTCTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299969.10
ENST00000319327.7
CDS CAA 90 bp TCTGGATCCTGTGTGTCTTGCCCCACACCCTTTCCACTACTGTCCTaGACAGCAGGAGGCAGCAGATTGCTGAGGCCCCCACATGGAGGA +
Preference number: 6 (lower is better)
Translates to: SGSCVSCPTPFPLLS*TAGGSRLLRPPHGG
Trigger: TCCTCCATGTGGGGGCCTCAGCAATCTGCTGCCTCCTGCTGTCAAGGACAGTAGTGGAAAGGGTGTGGGGCAAGACACACAGGATCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS CCA 72 bp CAGCTCCCACACCTGCCATGCTGTAGAATCCTAGGGTaGCCAGCAGGACAGCCAGGAACCAGCTACAGTCTT +
Preference number: 6 (lower is better)
Translates to: QLPHLPCCRILG*PAGQPGTSYSL
Trigger: AAGACTGTAGCTGGTTCCTGGCTGTCCTGCTGGCCACCCTAGGATTCTACAGCATGGCAGGTGTGGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000448553.5
ENST00000476490.1
CDS CAA 72 bp TGTGTGTCTTGCCCCACACCCTTTCCACTACTGTCCTaGACAGCAGGAGGCAGCAGATTGCTGAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: CVSCPTPFPLLS*TAGGSRLLRPP
Trigger: TGGGGGCCTCAGCAATCTGCTGCCTCCTGCTGTCAAGGACAGTAGTGGAAAGGGTGTGGGGCAAGACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS CAA 72 bp GGTGGCCAGCAGGACAGCCAGGAACCAGCTACAGTCTaGAGCTGCACCTGTCTGCCAGTTCTTGTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: GGQQDSQEPATV*SCTCLPVLVPG
Trigger: TCCTGGAACAAGAACTGGCAGACAGGTGCAGCTCAAGACTGTAGCTGGTTCCTGGCTGTCCTGCTGGCCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000448553.5
ENST00000476490.1
CDS TCA 72 bp GTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTaGCCTCCAGGTTGCGGTAAATGCAAATGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: VPGRMETSGREH*PPGCGKCKCPV
Trigger: CACAGGGCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319327.7
CDS TCA 72 bp CCCCAAAACCTGGAATGCTGTAGGACATGTACCCACTaGGGCGGATGCAAGGAGCGATGGAGAGGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: PQNLECCRTCTH*GGCKERWRGRR
Trigger: TCTCCTTCCTCTCCATCGCTCCTTGCATCCGCCTCAGTGGGTACATGTCCTACAGCATTCCAGGTTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476490.1
CDS GCA 72 bp AGGTCCACCAGATGGAAGGCAGATGAGAGCAGCAGTTaGTTCTGTCCTCAGCCCATTGGACTGCCACTGTGT +
Preference number: 6 (lower is better)
Translates to: RSTRWKADESSS*FCPQPIGLPLC
Trigger: ACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAACTGCTGCTCTCATCTGCCTTCCATCTGGTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000457418.5
CDS GCA 72 bp AATAGTGGAATAGGAGCACAGCTCCCACACCTGCCATaGTGTAGAATCCTAGGGTGGCCAGCAGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: NSGIGAQLPHLP*CRILGWPAGQP
Trigger: TGGCTGTCCTGCTGGCCACCCTAGGATTCTACAGCATGGCAGGTGTGGGAGCTGTGCTCCTATTCCACTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299969.10
ENST00000319327.7
ENST00000448553.5
ENST00000476490.1
CDS TCA 72 bp ACTGACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTaGAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGG +
Preference number: 6 (lower is better)
Translates to: TDLQVAVNANAL*RSFVLRASTLR
Trigger: CCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTGGAGGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319327.7
CDS GCA 72 bp CTGTCCCTTACCTCTCTCTGGAGGACGGCTGGACAGTaGAGAGAAAGTCAGATACATGATATAGCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: LSLTSLWRTAGQ*RESQIHDIAAD
Trigger: ATCAGCTGCTATATCATGTATCTGACTTTCTCTGCACTGTCCAGCCGTCCTCCAGAGAGAGGTAAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476490.1
CDS GCA 72 bp GGCCAGAGCGGGGTTGCTCTGGGGAGTAAGTATAATTaGTTTAGTCTACAGGCTGGTAATTTCCTCCATTTC +
Preference number: 6 (lower is better)
Translates to: GQSGVALGSKYN*FSLQAGNFLHF
Trigger: GAAATGGAGGAAATTACCAGCCTGTAGACTAAAGCAATTATACTTACTCCCCAGAGCAACCCCGCTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476490.1