RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERINC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000168528

Ensembl transcript IDs: ENST00000373709.8, ENST00000373710.5, ENST00000487207.5, ENST00000491976.1, ENST00000536384.2, ENST00000536859.5

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGGGGAGGGGGCAGGTTaGCTGTCACTGAGCCGAGAG +
Preference number: 2 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPGEGAG*LSLSRE
Trigger: CTCTCGGCTCAGTGACAGCCAACCTGCCCCCTCCCC...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 2 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 2 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 2 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCGCTCCCGTGGAGCCTaGGGACAAGGGAGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFRSRGA*GQGSPF
Trigger: GAAAGGGCTCCCTTGTCCTCAGGCTCCACGGGAGCG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCCGCTCCCGTGGAGCCTaGGGACAAGGGAGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRRSRGA*GQGSPF
Trigger: GAAAGGGCTCCCTTGTCCTCAGGCTCCACGGGAGCG...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCGGGGAGGGGGCAGGTTaGCTGTCACTGAGCCGAGAG +
Preference number: 2 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLGEGAG*LSLSRE
Trigger: CTCTCGGCTCAGTGACAGCCAACCTGCCCCCTCCCC...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGGGGAGGGGGCAGGTTaGCTGTCACTGAGCCGAGAG +
Preference number: 2 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFGEGAG*LSLSRE
Trigger: CTCTCGGCTCAGTGACAGCCAACCTGCCCCCTCCCC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGGTGGGGGCTCAGCCTaGCTGATTGGTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRGGGSA*LIGVGR
Trigger: CCTCCCCACACCAATCAGCCAGGCTGAGCCCCCACC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGGTGGGGGCTCAGCCTaGCTGATTGGTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAGGGSA*LIGVGR
Trigger: CCTCCCCACACCAATCAGCCAGGCTGAGCCCCCACC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTaGGAGTTCCCCGCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPDAPLW*EFPALS
Trigger: GGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATC...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCAGGTTGGCTGTCACTaGGCCGAGAGGCACCAGGTG +
Preference number: 2 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFQVGCH*AERHQV
Trigger: CACCTGGTGCCTCTCGGCTCAGTGACAGCCAACCTG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCAGGTTGGCTGTCACTaGGCCGAGAGGCACCAGGTG +
Preference number: 2 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVQVGCH*AERHQV
Trigger: CACCTGGTGCCTCTCGGCTCAGTGACAGCCAACCTG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCGGCTCTGCAGGAGCCTaGTGCTCCTCGGACCCTGAA +
Preference number: 2 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPGSAGA*CSSDPE
Trigger: TTCAGGGTCCGAGGAGCATCAGGCTCCTGCAGAGCC...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGGCTCTGCAGGAGCCTaGTGCTCCTCGGACCCTGAA +
Preference number: 2 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFGSAGA*CSSDPE
Trigger: TTCAGGGTCCGAGGAGCATCAGGCTCCTGCAGAGCC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAGGGGAGGGGGCAGGTTaGCTGTCACTGAGCCGAGAG +
Preference number: 2 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGGEGAG*LSLSRE
Trigger: CTCTCGGCTCAGTGACAGCCAACCTGCCCCCTCCCC...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACAGGTTGGCTGTCACTaGGCCGAGAGGCACCAGGTG +
Preference number: 2 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGQVGCH*AERHQV
Trigger: CACCTGGTGCCTCTCGGCTCAGTGACAGCCAACCTG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGACTCAGCCTGGCTGATTaGTGTGGGGAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGLSLAD*CGEGAG
Trigger: ACCTGCCCCCTCCCCACACCAATCAGCCAGGCTGAG...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGGTGGGGGCTCAGCCTaGCTGATTGGTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGGGGSA*LIGVGR
Trigger: CCTCCCCACACCAATCAGCCAGGCTGAGCCCCCACC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCTTTCATCCGAGATGCTaGGTATGGGCAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPFHPRC*VWATGR
Trigger: CCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAA...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCTTTCATCCGAGATGCTaGGTATGGGCAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFFHPRC*VWATGR
Trigger: CCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAA...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTTTCATCCGAGATGCTaGGTATGGGCAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLFHPRC*VWATGR
Trigger: CCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAA...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR-3UTR TCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGATTTCATCCGAGATGCTaGGTATGGGCAACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGFHPRC*VWATGR
Trigger: CCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAA...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
3UTR GCA 72 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATaGCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: GRDQEHQGFSAG*PTVVGVPRSLQ
Trigger: CTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGGCTCACGGTGGAGTTaGGGCTGGCGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWGSRWS*GWRGSS
Trigger: GCTGCTGCCCCGCCAGCCGCAACTCCACCGTGAGCC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGCTCACGGTGGAGTTaGGGCTGGCGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVGSRWS*GWRGSS
Trigger: GCTGCTGCCCCGCCAGCCGCAACTCCACCGTGAGCC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGTGGCTGGGTCCGGGTaGCTCCTCCTCTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPVAGSG*LLLSQP
Trigger: AGGCTGAGAGAGGAGGAGTCACCCGGACCCAGCCAC...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373710.5
ENST00000536859.5
CDS-3UTR GCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGCAGTCGATGTGGCCCTaGAGGACGGTGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPQSMWP*RTVGIP
Trigger: CGGGATCCCCACCGTCCTGCAGGGCCACATCGACTG...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCCGCACTCCTCGGCCTTaGCCAGCCACCGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRRTPRP*PATAGS
Trigger: GGAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCG...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCCGCACTCCTCGGCCTTaGCCAGCCACCGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLRTPRP*PATAGS
Trigger: GGAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCG...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCGCACTCCTCGGCCTTaGCCAGCCACCGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWRTPRP*PATAGS
Trigger: GGAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGGCGAGCTGGGGAAGTaGCTGAGAGGCAGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRGELGK*LRGSAS
Trigger: GCTCGCGCTGCCTCTCAGGCACTTCCCCAGCTCGCC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536384.2
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCGGTGGAGTTGCGGCTaGCGGGGCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFRWSCG*RGSSCT
Trigger: TGTGCAGCTGCTGCCCCGCCAGCCGCAACTCCACCG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCCGGTGGAGTTGCGGCTaGCGGGGCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPRWSCG*RGSSCT
Trigger: TGTGCAGCTGCTGCCCCGCCAGCCGCAACTCCACCG...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCGGTGGAGTTGCGGCTaGCGGGGCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVRWSCG*RGSSCT
Trigger: TGTGCAGCTGCTGCCCCGCCAGCCGCAACTCCACCG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGCCGGATGCCCCACTGTaGTGGGAGTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPPDAPL*WEFPAL
Trigger: GAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGG...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGAGGCAGGACGCTGTGTaGCTGGGTCCGGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPRQDAV*LGPGDS
Trigger: GGAGTCACCCGGACCCAGCCACACAGCGTCCTGCCT...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373710.5
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCATCCCAGTCTCCGCGCTaGGGCCCAGATGATCCGGGG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPASQSPR*GPDDPG
Trigger: CCCCGGATCATCTGGGCCCCAGCGCGGAGACTGGGA...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536384.2
CDS-3UTR TCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGCGGCGGTCCACGTGCTaGTCATCTTCCGGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPRRSTC*SSSGSH
Trigger: GTGAGACCCGGAAGATGATCAGCACGTGGACCGCCG...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGCTGGGTCCGGGTaGCTCCTCCTCTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVVAGSG*LLLSQP
Trigger: AGGCTGAGAGAGGAGGAGTCACCCGGACCCAGCCAC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373710.5
ENST00000536859.5
CDS-3UTR TCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGAGCTGGGGAAGTGCCTaGGAGGCAGCGCGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVSWGSA*EAARAR
Trigger: TCTGGCTCGCGCTGCCTCTCAGGCACTTCCCCAGCT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536384.2
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCAGTCGATGTGGCCCTaGAGGACGGTGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVQSMWP*RTVGIP
Trigger: CGGGATCCCCACCGTCCTGCAGGGCCACATCGACTG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCACAGTCGATGTGGCCCTaGAGGACGGTGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAQSMWP*RTVGIP
Trigger: CGGGATCCCCACCGTCCTGCAGGGCCACATCGACTG...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTCGCACTCCTCGGCCTTaGCCAGCCACCGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSRTPRP*PATAGS
Trigger: GGAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCG...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGTGATGACCGAGGCCTaGAGCAGACCCGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPVMTEA*SRPELG
Trigger: GCCCAACTCGGGTCTGCTGCAGGCCTCGGTCATCAC...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGAGCCACAGTCGATGTaGCCCTGCAGGACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFEPQSM*PCRTVG
Trigger: CCCCACCGTCCTGCAGGGCCACATCGACTGTGGCTC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGGCGTCCTGGACCTTaGGCAGGACAGCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVGRPGP*AGQQRW
Trigger: CCATCGCTGCTGTCCTGCCCAAGGTCCAGGACGCCC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAGACCCGAGTTGGGCTaGGCGTCCTGGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPRPELG*ASWTLG
Trigger: GCCCAAGGTCCAGGACGCCCAGCCCAACTCGGGTCT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAAGACCCGAGTTGGGCTaGGCGTCCTGGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPARPELG*ASWTLG
Trigger: GCCCAAGGTCCAGGACGCCCAGCCCAACTCGGGTCT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGACCCGAGTTGGGCTaGGCGTCCTGGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFRPELG*ASWTLG
Trigger: GCCCAAGGTCCAGGACGCCCAGCCCAACTCGGGTCT...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCAGCAGACCCGAGTTaGGCTGGGCGTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAAADPS*AGRPGP
Trigger: AGGTCCAGGACGCCCAGCCCAACTCGGGTCTGCTGC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGCAGCAGACCCGAGTTaGGCTGGGCGTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFAADPS*AGRPGP
Trigger: AGGTCCAGGACGCCCAGCCCAACTCGGGTCTGCTGC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGGGGAGGGGGCAGGTTaGCTGTCACTGAGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWGEGAG*LSLSRE
Trigger: CTCTCGGCTCAGTGACAGCCAACCTGCCCCCTCCCC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGCTCAGCCTGGCTGATTaGTGTGGGGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPLSLAD*CGEGAG
Trigger: ACCTGCCCCCTCCCCACACCAATCAGCCAGGCTGAG...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGGTGGGGGCTCAGCCTaGCTGATTGGTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWGGGSA*LIGVGR
Trigger: CCTCCCCACACCAATCAGCCAGGCTGAGCCCCCACC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGTGGGGGCTCAGCCTaGCTGATTGGTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVGGGSA*LIGVGR
Trigger: CCTCCCCACACCAATCAGCCAGGCTGAGCCCCCACC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCAGCCCCGCTCCCGTaGAGCCTGAGGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSAAPLP*SLRTRE
Trigger: CTCCCTTGTCCTCAGGCTCCACGGGAGCGGGGCTGC...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCCGGATGCCCCACTGTaGTGGGAGTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWPDAPL*WEFPAL
Trigger: GAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCCGGATGCCCCACTGTaGTGGGAGTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFPDAPL*WEFPAL
Trigger: GAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCCGGATGCCCCACTGTaGTGGGAGTTCCCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVPDAPL*WEFPAL
Trigger: GAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGAGGCAGGACGCTGTGTaGCTGGGTCCGGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWRQDAV*LGPGDS
Trigger: GGAGTCACCCGGACCCAGCCACACAGCGTCCTGCCT...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373710.5
ENST00000536859.5
CDS-3UTR TCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCGGCGGTCCACGTGCTaGTCATCTTCCGGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVRRSTC*SSSGSH
Trigger: GTGAGACCCGGAAGATGATCAGCACGTGGACCGCCG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCCAGGTTGGCTGTCACTaGGCCGAGAGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRQVGCH*AERHQV
Trigger: CACCTGGTGCCTCTCGGCTCAGTGACAGCCAACCTG...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCCAGGTTGGCTGTCACTaGGCCGAGAGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLQVGCH*AERHQV
Trigger: CACCTGGTGCCTCTCGGCTCAGTGACAGCCAACCTG...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCACAGGTTGGCTGTCACTaGGCCGAGAGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAQVGCH*AERHQV
Trigger: CACCTGGTGCCTCTCGGCTCAGTGACAGCCAACCTG...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGCTCTGCAGGAGCCTaGTGCTCCTCGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVGSAGA*CSSDPE
Trigger: TTCAGGGTCCGAGGAGCATCAGGCTCCTGCAGAGCC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGGCTCTGCAGGAGCCTaGTGCTCCTCGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRGSAGA*CSSDPE
Trigger: TTCAGGGTCCGAGGAGCATCAGGCTCCTGCAGAGCC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTCGCTCCCGTGGAGCCTaGGGACAAGGGAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSRSRGA*GQGSPF
Trigger: GAAAGGGCTCCCTTGTCCTCAGGCTCCACGGGAGCG...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACGCTCCCGTGGAGCCTaGGGACAAGGGAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGRSRGA*GQGSPF
Trigger: GAAAGGGCTCCCTTGTCCTCAGGCTCCACGGGAGCG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCAGCAGCTGCACAGGATaGAGGGGGCAGAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRSSCTG*RGQSRR
Trigger: TCTGCGGCTCTGCCCCCTGCATCCTGTGCAGCTGCT...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAGCAGCTGCACAGGATaGAGGGGGCAGAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPSSCTG*RGQSRR
Trigger: TCTGCGGCTCTGCCCCCTGCATCCTGTGCAGCTGCT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCACCGTGGCGAAGCACATaGGGTAGACAGCGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAPWRST*GRQRGS
Trigger: GCTACCGCGCTGTCTACCGCATGTGCTTCGCCACGG...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCCGTGGCGAAGCACATaGGGTAGACAGCGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFPWRST*GRQRGS
Trigger: GCTACCGCGCTGTCTACCGCATGTGCTTCGCCACGG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCGTGATGACCGAGGCCTaGAGCAGACCCGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLVMTEA*SRPELG
Trigger: GCCCAACTCGGGTCTGCTGCAGGCCTCGGTCATCAC...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCGTGATGACCGAGGCCTaGAGCAGACCCGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPVMTEA*SRPELG
Trigger: GCCCAACTCGGGTCTGCTGCAGGCCTCGGTCATCAC...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCGCTGCCACCTGCTGCTaGTGCTGTGTGGCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPAATCC*CCVASS
Trigger: GCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGC...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGCTGCCACCTGCTGCTaGTGCTGTGTGGCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFAATCC*CCVASS
Trigger: GCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCTCACAGGCTGCCACCTaGTGCTGCTGCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPSQAAT*CCCCVA
Trigger: CGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGA...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCACAGGCTGCCACCTaGTGCTGCTGCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLSQAAT*CCCCVA
Trigger: CGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGA...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAAAACCCATTCTGGATaGCAGCCCGGGGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPKTHSG*QPGGPG
Trigger: GCCGGGACCCCCGGGCTGCCATCCAGAATGGGTTTT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGAAAACCCATTCTGGATaGCAGCCCGGGGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVKTHSG*QPGGPG
Trigger: GCCGGGACCCCCGGGCTGCCATCCAGAATGGGTTTT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCAAAACCCATTCTGGATaGCAGCCCGGGGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLKTHSG*QPGGPG
Trigger: GCCGGGACCCCCGGGCTGCCATCCAGAATGGGTTTT...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCAAGACCTTGCCCTCGTaGCAGCCGCTGGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRKTLPS*QPLGSV
Trigger: CACTGAGCCCAGCGGCTGCCACGAGGGCAAGGTCTT...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAAAGACCTTGCCCTCGTaGCAGCCGCTGGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAKTLPS*QPLGSV
Trigger: CACTGAGCCCAGCGGCTGCCACGAGGGCAAGGTCTT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGAAGACCTTGCCCTCGTaGCAGCCGCTGGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWKTLPS*QPLGSV
Trigger: CACTGAGCCCAGCGGCTGCCACGAGGGCAAGGTCTT...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGGGCGTCCTGGACCTTaGGCAGGACAGCAGCGATGG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSGRPGP*AGQQRW
Trigger: CCATCGCTGCTGTCCTGCCCAAGGTCCAGGACGCCC...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGTTGGGCTGGGCGTCCTaGACCTTGGGCAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVLGWAS*TLGRTA
Trigger: TGCTGTCCTGCCCAAGGTCCAGGACGCCCAGCCCAA...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCATTGGGCTGGGCGTCCTaGACCTTGGGCAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPALGWAS*TLGRTA
Trigger: TGCTGTCCTGCCCAAGGTCCAGGACGCCCAGCCCAA...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTAGACCCGAGTTGGGCTaGGCGTCCTGGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSRPELG*ASWTLG
Trigger: GCCCAAGGTCCAGGACGCCCAGCCCAACTCGGGTCT...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGCAGCAGACCCGAGTTaGGCTGGGCGTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGAADPS*AGRPGP
Trigger: AGGTCCAGGACGCCCAGCCCAACTCGGGTCTGCTGC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGGGGAGGGGGCAGGTTaGCTGTCACTGAGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGGEGAG*LSLSRE
Trigger: CTCTCGGCTCAGTGACAGCCAACCTGCCCCCTCCCC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCACTCAGCCTGGCTGATTaGTGTGGGGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPALSLAD*CGEGAG
Trigger: ACCTGCCCCCTCCCCACACCAATCAGCCAGGCTGAG...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCTCAGCCTGGCTGATTaGTGTGGGGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWLSLAD*CGEGAG
Trigger: ACCTGCCCCCTCCCCACACCAATCAGCCAGGCTGAG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCTCAGCCTGGCTGATTaGTGTGGGGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVLSLAD*CGEGAG
Trigger: ACCTGCCCCCTCCCCACACCAATCAGCCAGGCTGAG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGATGCCCCACTGTGGTaGGAGTTCCCCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPADAPLW*EFPALS
Trigger: GGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCGATGCCCCACTGTGGTaGGAGTTCCCCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPDAPLW*EFPALS
Trigger: GGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATC...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCGATGCCCCACTGTGGTaGGAGTTCCCCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLDAPLW*EFPALS
Trigger: GGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATC...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACGGCGGTCCACGTGCTaGTCATCTTCCGGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGRRSTC*SSSGSH
Trigger: GTGAGACCCGGAAGATGATCAGCACGTGGACCGCCG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGGCTCTGCAGGAGCCTaGTGCTCCTCGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSGSAGA*CSSDPE
Trigger: TTCAGGGTCCGAGGAGCATCAGGCTCCTGCAGAGCC...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACCGTGGCGAAGCACATaGGGTAGACAGCGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGPWRST*GRQRGS
Trigger: GCTACCGCGCTGTCTACCGCATGTGCTTCGCCACGG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGATAGCCCTCGGGGCCTaGCACAACTGTCTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVIALGA*HNCLVA
Trigger: GGCAACGAGACAGTTGTGGCAGGCCCCGAGGGCTAT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCATCAGGCTGTTCACCTaGCGGTGGTCTGAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPIRLFT*RWSEER
Trigger: GCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGAT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAATCAGGCTGTTCACCTaGCGGTGGTCTGAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAIRLFT*RWSEER
Trigger: GCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGAT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGGGCACTCCTCGGTCTaGATCAGGCTGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFGHSSV*IRLFTC
Trigger: GCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGGGCACTCCTCGGTCTaGATCAGGCTGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRGHSSV*IRLFTC
Trigger: GCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGGGCACTCCTCGGTCTaGATCAGGCTGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWGHSSV*IRLFTC
Trigger: GCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGCTGCCACCTGCTGCTaGTGCTGTGTGGCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGAATCC*CCVASS
Trigger: GCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGGCTTCAGTGCCGGATaGCCCACTGTGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAGFSAG*PTVVGV
Trigger: AACTCCCACCACAGTGGGGCATCCGGCACTGAAGCC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGCTTCAGTGCCGGATaGCCCACTGTGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVGFSAG*PTVVGV
Trigger: AACTCCCACCACAGTGGGGCATCCGGCACTGAAGCC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGAGAAGAAGGCCGCCGTaGCGAAGCACATGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPRRRPP*RSTCGR
Trigger: TCTACCGCATGTGCTTCGCCACGGCGGCCTTCTTCT...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAAAAACCCATTCTGGATaGCAGCCCGGGGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGKTHSG*QPGGPG
Trigger: GCCGGGACCCCCGGGCTGCCATCCAGAATGGGTTTT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTTGCCCAGCCACCGCTaGTTCCAGGAGTGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRLPSHR*FQECAK
Trigger: CTTTGCGCACTCCTGGAACCAGCGGTGGCTGGGCAA...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTTGCCCAGCCACCGCTaGTTCCAGGAGTGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWLPSHR*FQECAK
Trigger: CTTTGCGCACTCCTGGAACCAGCGGTGGCTGGGCAA...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCCTGTTCACCTGCCGGTaGTCTGAGGAGCGCAGACTG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRLFTCR*SEERRL
Trigger: CAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAG...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCTGTTCACCTGCCGGTaGTCTGAGGAGCGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFLFTCR*SEERRL
Trigger: CAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCTGTTCACCTGCCGGTaGTCTGAGGAGCGCAGACTG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWLFTCR*SEERRL
Trigger: CAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGCAGCCCTGCCCAGCTaGCACAGATCTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFAALPS*HRSSPT
Trigger: TGTGGGTGAAGATCTGTGCCAGCTGGGCAGGGCTGC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCGCAGCCCTGCCCAGCTaGCACAGATCTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLAALPS*HRSSPT
Trigger: TGTGGGTGAAGATCTGTGCCAGCTGGGCAGGGCTGC...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGCAGCCCTGCCCAGCTaGCACAGATCTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWAALPS*HRSSPT
Trigger: TGTGGGTGAAGATCTGTGCCAGCTGGGCAGGGCTGC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGATGCCCCACTGTGGTaGGAGTTCCCCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGDAPLW*EFPALS
Trigger: GGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCGCTCAGTGTAGTACATaGACATCAGCGCCACGGCCG +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLAQCST*TSAPRP
Trigger: CGGCCGTGGCGCTGATGTTCATGTACTACACTGAGC...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCAGGAGTAGCTGTAGGTaGCGCCGTCCTGCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLRSSCR*RRPARC
Trigger: ACAACGAGCAGGACGGCGTCACCTACAGCTACTCCT...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAAGGAGTAGCTGTAGGTaGCGCCGTCCTGCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPARSSCR*RRPARC
Trigger: ACAACGAGCAGGACGGCGTCACCTACAGCTACTCCT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCCATCATGACGTGCAGTaGGGCCAGCACCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLHHDVQ*GQHQAE
Trigger: TTCTGCCTGGTGCTGGCCTCACTGCACGTCATGATG...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCATCATGACGTGCAGTaGGGCCAGCACCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVHHDVQ*GQHQAE
Trigger: TTCTGCCTGGTGCTGGCCTCACTGCACGTCATGATG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCCATCATGACGTGCAGTaGGGCCAGCACCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPHHDVQ*GQHQAE
Trigger: TTCTGCCTGGTGCTGGCCTCACTGCACGTCATGATG...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGATGTGTGCCGGCTTTaGGCCCTCCTATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGDVCRL*ALLSLG
Trigger: CCCAAGGGATAGGAGGGCTCAAAGCCGGCACACATC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR GCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAATAGCCCTCGGGGCCTaGCACAACTGTCTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGIALGA*HNCLVA
Trigger: GGCAACGAGACAGTTGTGGCAGGCCCCGAGGGCTAT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTATAGCCCTCGGGGCCTaGCACAACTGTCTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSIALGA*HNCLVA
Trigger: GGCAACGAGACAGTTGTGGCAGGCCCCGAGGGCTAT...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAATCAGGCTGTTCACCTaGCGGTGGTCTGAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGIRLFT*RWSEER
Trigger: GCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGAT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGGGCACTCCTCGGTCTaGATCAGGCTGTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGGHSSV*IRLFTC
Trigger: GCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCCACCTGCTGCTGCTaGTGTGTGGCGTCTAGCATA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVATCCC*CVASSI
Trigger: TATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCACCTGCTGCTGCTaGTGTGTGGCGTCTAGCATA +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAATCCC*CVASSI
Trigger: TATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAAGCGTCATCATGACGTaGAGTGAGGCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPASVIMT*SEASTR
Trigger: CCTGGTGCTGGCCTCACTGCACGTCATGATGACGCT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCAGCGTCATCATGACGTaGAGTGAGGCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRSVIMT*SEASTR
Trigger: CCTGGTGCTGGCCTCACTGCACGTCATGATGACGCT...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGGCTTCAGTGCCGGATaGCCCACTGTGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGGFSAG*PTVVGV
Trigger: AACTCCCACCACAGTGGGGCATCCGGCACTGAAGCC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAGGCTTCAGTGCCGGATaGCCCACTGTGGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGGFSAG*PTVVGV
Trigger: AACTCCCACCACAGTGGGGCATCCGGCACTGAAGCC...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAACACCAGGGCTTCAGTaGCGGATGCCCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGTPGLQ*RMPHCG
Trigger: ACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTACACCAGGGCTTCAGTaGCGGATGCCCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSTPGLQ*RMPHCG
Trigger: ACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGT...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCGGTGGAGTTGCGGCTaGCGGGGCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRWSCG*RGSSCT
Trigger: TGTGCAGCTGCTGCCCCGCCAGCCGCAACTCCACCG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCAGAAGAAGGCCGCCGTaGCGAAGCACATGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRRRRPP*RSTCGR
Trigger: TCTACCGCATGTGCTTCGCCACGGCGGCCTTCTTCT...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAACCAAAACCCATTCTaGATGGCAGCCCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPNQNPF*MAARGS
Trigger: GGACCCCCGGGCTGCCATCCAGAATGGGTTTTGGTT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCAACCAAAACCCATTCTaGATGGCAGCCCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLNQNPF*MAARGS
Trigger: GGACCCCCGGGCTGCCATCCAGAATGGGTTTTGGTT...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTTTGCCCAGCCACCGCTaGTTCCAGGAGTGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSLPSHR*FQECAK
Trigger: CTTTGCGCACTCCTGGAACCAGCGGTGGCTGGGCAA...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCAGGACAGCAGCGATaGACACGCAGACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAAGQQR*TRRHRR
Trigger: CCTTCTGTGTCTGCGTGTCCATCGCTGCTGTCCTGC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGCAGGACAGCAGCGATaGACACGCAGACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFAGQQR*TRRHRR
Trigger: CCTTCTGTGTCTGCGTGTCCATCGCTGCTGTCCTGC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGTCTCGTTGCCCAGCTaGGTTGGCAAATGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWVSLPS*VGKWGL
Trigger: CAACCCCCATTTGCCAACCCAGCTGGGCAACGAGAC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTCTCGTTGCCCAGCTaGGTTGGCAAATGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVVSLPS*VGKWGL
Trigger: CAACCCCCATTTGCCAACCCAGCTGGGCAACGAGAC...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACTGTTCACCTGCCGGTaGTCTGAGGAGCGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGLFTCR*SEERRL
Trigger: CAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAAGGAGTAGCTGTAGGTaGCGCCGTCCTGCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGRSSCR*RRPARC
Trigger: ACAACGAGCAGGACGGCGTCACCTACAGCTACTCCT...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTAGGAGTAGCTGTAGGTaGCGCCGTCCTGCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSRSSCR*RRPARC
Trigger: ACAACGAGCAGGACGGCGTCACCTACAGCTACTCCT...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCGCTCCCGTGGAGCCTaGGGACAAGGGAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRSRGA*GQGSPF
Trigger: GAAAGGGCTCCCTTGTCCTCAGGCTCCACGGGAGCG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTTCATCCTCCCGTCCATaGGGACTCAGATGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSSSSRP*GLRCVP
Trigger: CGGCACACATCTGAGTCCTCATGGACGGGAGGATGA...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCAGTCGATGTGGCCCTaGAGGACGGTGGGGATCCCG +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGQSMWP*RTVGIP
Trigger: CGGGATCCCCACCGTCCTGCAGGGCCACATCGACTG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGAAGAAGAAGAGGCCTaGGTACCAGGCACGGGAATC +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFEEEEA*VPGTGI
Trigger: GATTCCCGTGCCTGGTACGCAGGCCTCTTCTTCTTC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCGAAGAAGAAGAGGCCTaGGTACCAGGCACGGGAATC +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPEEEEA*VPGTGI
Trigger: GATTCCCGTGCCTGGTACGCAGGCCTCTTCTTCTTC...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGAAGAAGAAGAGGCCTaGGTACCAGGCACGGGAATC +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPREEEEA*VPGTGI
Trigger: GATTCCCGTGCCTGGTACGCAGGCCTCTTCTTCTTC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAGCCACCTGCTGCTGCTaGTGTGTGGCGTCTAGCATA +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGATCCC*CVASSI
Trigger: TATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGC...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTAGCGTCATCATGACGTaGAGTGAGGCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSSVIMT*SEASTR
Trigger: CCTGGTGCTGGCCTCACTGCACGTCATGATGACGCT...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGACGCACCATCCACTCTaGTCTCCCCATAAACACCCC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVTHHPL*SPHKHP
Trigger: GGGGTGTTTATGGGGAGAGCAGAGTGGATGGTGCGT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAAGAAGAAGGCCGCCGTaGCGAAGCACATGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGRRRPP*RSTCGR
Trigger: TCTACCGCATGTGCTTCGCCACGGCGGCCTTCTTCT...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAAGAAGAAGGCCGCCGTaGCGAAGCACATGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGRRRPP*RSTCGR
Trigger: TCTACCGCATGTGCTTCGCCACGGCGGCCTTCTTCT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTAACCAAAACCCATTCTaGATGGCAGCCCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSNQNPF*MAARGS
Trigger: GGACCCCCGGGCTGCCATCCAGAATGGGTTTTGGTT...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCAGGACAGCAGCGATaGACACGCAGACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSAGQQR*TRRHRR
Trigger: CCTTCTGTGTCTGCGTGTCCATCGCTGCTGTCCTGC...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTCTCGTTGCCCAGCTaGGTTGGCAAATGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGVSLPS*VGKWGL
Trigger: CAACCCCCATTTGCCAACCCAGCTGGGCAACGAGAC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGAGCCCTCCTATCCCTTaGGCTTCGCTGTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWSPPIP*ASLSVL
Trigger: CAGTACAGACAGCGAAGCCCAAGGGATAGGAGGGCT...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR TCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCATAGGGCTGACCAGGTaGCAAACATGGTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFIGLTR*QTWCRG
Trigger: CCCTCTACACCATGTTTGTCACCTGGTCAGCCCTAT...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAATAGGGCTGACCAGGTaGCAAACATGGTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAIGLTR*QTWCRG
Trigger: CCCTCTACACCATGTTTGTCACCTGGTCAGCCCTAT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCATAGGGCTGACCAGGTaGCAAACATGGTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRIGLTR*QTWCRG
Trigger: CCCTCTACACCATGTTTGTCACCTGGTCAGCCCTAT...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCGGCGGTCCACGTGCTaGTCATCTTCCGGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRRSTC*SSSGSH
Trigger: GTGAGACCCGGAAGATGATCAGCACGTGGACCGCCG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGGCTCTGCAGGAGCCTaGTGCTCCTCGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGGSAGA*CSSDPE
Trigger: TTCAGGGTCCGAGGAGCATCAGGCTCCTGCAGAGCC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTTTCATCCGAGATGCTaGGTATGGGCAACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRFHPRC*VWATGR
Trigger: CCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAA...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCTTTACTCCCAGATTTaGACCTCCTGCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWLYSQI*TSCMGP
Trigger: TGGCCCCATGCAGGAGGTTCAAATCTGGGAGTAAAG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGAGCAGCTGCACAGGATaGAGGGGGCAGAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGSSCTG*RGQSRR
Trigger: TCTGCGGCTCTGCCCCCTGCATCCTGTGCAGCTGCT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCCGTGGCGAAGCACATaGGGTAGACAGCGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGPWRST*GRQRGS
Trigger: GCTACCGCGCTGTCTACCGCATGTGCTTCGCCACGG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGTGATGACCGAGGCCTaGAGCAGACCCGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGVMTEA*SRPELG
Trigger: GCCCAACTCGGGTCTGCTGCAGGCCTCGGTCATCAC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCCACAACTGTCTCGTTaGCCAGCTGGGTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWPQLSR*PAGLAN
Trigger: ATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCCCACAACTGTCTCGTTaGCCAGCTGGGTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPPQLSR*PAGLAN
Trigger: ATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGG...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCCACAACTGTCTCGTTaGCCAGCTGGGTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVPQLSR*PAGLAN
Trigger: ATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGCTGCCACCTGCTGCTaGTGCTGTGTGGCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGAATCC*CCVASS
Trigger: GCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCCTCTCTCAGCCTCATaGTTCTCATCATCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWPLSAS*FSSSSR
Trigger: ACGGGAGGATGATGAGAAGCATGAGGCTGAGAGAGG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGAAGACCTTGCCCTCGTaGCAGCCGCTGGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGKTLPS*QPLGSV
Trigger: CACTGAGCCCAGCGGCTGCCACGAGGGCAAGGTCTT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGTTGGGCTGGGCGTCCTaGACCTTGGGCAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGLGWAS*TLGRTA
Trigger: TGCTGTCCTGCCCAAGGTCCAGGACGCCCAGCCCAA...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGTTGCCCAGCTGGGTTaGCAAATGGGGGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAVAQLG*QMGVAF
Trigger: AAATGCAACCCCCATTTGCCAACCCAGCTGGGCAAC...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGTTGCCCAGCTGGGTTaGCAAATGGGGGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWVAQLG*QMGVAF
Trigger: AAATGCAACCCCCATTTGCCAACCCAGCTGGGCAAC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAGAACCAGATGTTGGTaGAGGAGCCGTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPRTRCW*RSRQEC
Trigger: ACATTCCTGACGGCTCCTTCACCAACATCTGGTTCT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCAGAACCAGATGTTGGTaGAGGAGCCGTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLRTRCW*RSRQEC
Trigger: ACATTCCTGACGGCTCCTTCACCAACATCTGGTTCT...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTTTTCATCCGAGATGCTaGGTATGGGCAACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSFHPRC*VWATGR
Trigger: CCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAA...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGATAGCCCTCGGGGCCTaGCACAACTGTCTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGIALGA*HNCLVA
Trigger: GGCAACGAGACAGTTGTGGCAGGCCCCGAGGGCTAT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGACACCAGGGCTTCAGTaGCGGATGCCCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGTPGLQ*RMPHCG
Trigger: ACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR GCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGAGTAGCTCTGTCTCTTaGACCCCCAAAAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVSSSVS*TPKSTV
Trigger: GACTGTGCTTTTGGGGGTGCAAGAGACAGAGCTACT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAGTTGCCCAGCTGGGTTaGCAAATGGGGGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGVAQLG*QMGVAF
Trigger: AAATGCAACCCCCATTTGCCAACCCAGCTGGGCAAC...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGTTGCCCAGCTGGGTTaGCAAATGGGGGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSVAQLG*QMGVAF
Trigger: AAATGCAACCCCCATTTGCCAACCCAGCTGGGCAAC...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGCAGCCCTGCCCAGCTaGCACAGATCTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGAALPS*HRSSPT
Trigger: TGTGGGTGAAGATCTGTGCCAGCTGGGCAGGGCTGC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCGATTGGGGGAGCATCTaGGGAGAGGTATTCACATAC +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLDWGSI*GEVFTY
Trigger: GTATGTGAATACCTCTCCCCAGATGCTCCCCCAATC...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR TCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAAGAACCAGATGTTGGTaGAGGAGCCGTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGRTRCW*RSRQEC
Trigger: ACATTCCTGACGGCTCCTTCACCAACATCTGGTTCT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCATCATGACGTGCAGTaGGGCCAGCACCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGHHDVQ*GQHQAE
Trigger: TTCTGCCTGGTGCTGGCCTCACTGCACGTCATGATG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR TCA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCTCTATTTCCTGCTTCTaGCCCATTTACAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFSISCF*PIYRAG
Trigger: CCCTGCTCTGTAAATGGGTCAGAAGCAGGAAATAGA...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR GCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGAGCGTCATCATGACGTaGAGTGAGGCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGSVIMT*SEASTR
Trigger: CCTGGTGCTGGCCTCACTGCACGTCATGATGACGCT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGAACCAAAACCCATTCTaGATGGCAGCCCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGNQNPF*MAARGS
Trigger: GGACCCCCGGGCTGCCATCCAGAATGGGTTTTGGTT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGCAGGACAGCAGCGATaGACACGCAGACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGAGQQR*TRRHRR
Trigger: CCTTCTGTGTCTGCGTGTCCATCGCTGCTGTCCTGC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCAGCTGGGTTGGCAAATaGGGGTTGCATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLSWVGK*GLHFCS
Trigger: TGAACAGAAATGCAACCCCCATTTGCCAACCCAGCT...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAAGCTGGGTTGGCAAATaGGGGTTGCATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPASWVGK*GLHFCS
Trigger: TGAACAGAAATGCAACCCCCATTTGCCAACCCAGCT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGAGCTGGGTTGGCAAATaGGGGTTGCATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVSWVGK*GLHFCS
Trigger: TGAACAGAAATGCAACCCCCATTTGCCAACCCAGCT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCCTCACAAAGCGTGCATaGGATTTCAGAGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLLTKRA*DFRAKA
Trigger: AGCCTTTGCTCTGAAATCCCATGCACGCTTTGTGAG...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAAAGAGCTTCATTTCTTaGTGTCCTGGCCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGKSFIS*CPGQPI
Trigger: GATGGGCTGGCCAGGACACCAAGAAATGAAGCTCTT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS-3UTR TCA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGGGACTACTGAGGAGATaGAGTGAGGACATGGATAAA +
Preference number: 4 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWGLLRR*SEDMDK
Trigger: TTTATCCATGTCCTCACTTCATCTCCTCAGTAGTCC...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAAGCTGGGTTGGCAAATaGGGGTTGCATTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGSWVGK*GLHFCS
Trigger: TGAACAGAAATGCAACCCCCATTTGCCAACCCAGCT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CCA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAAAGATAATGAGAGCTTaGGATTGGGGGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGKIMRA*DWGSIW
Trigger: CCAGATGCTCCCCCAATCCCAAGCTCTCATTATCTT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CCA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGACTTCGCTGTCTGTACTaGCCTCTATTTCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGLRCLY*PLFPAS
Trigger: AGAAGCAGGAAATAGAGGCCAGTACAGACAGCGAAG...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR TCA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGAGAACCAGATGTTGGTaGAGGAGCCGTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRTRCW*RSRQEC
Trigger: ACATTCCTGACGGCTCCTTCACCAACATCTGGTTCT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS TCA 90 bp TGCACAGGATGCAGGGGGCAGAGCCGCAGAGGCAGGACGCGCAGCTaGGCAGGGAGCAGGCTCCCAGGCAGGCCCCCATGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: CTGCRGQSRRGRTRS*AGSRLPGRPPWRRL
Trigger: GAGCCGCCGCCATGGGGGCCTGCCTGGGAGCCTGCTCCCTGCTCAGCTGCGCGTCCTGCCTCTGCGGCTCTGCCCCCTGCATCCTGTGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373709.8
CDS GCA 90 bp GGCTCACGGTGGAGTTGCGGCTGGCGGGGCAGCAGCTGCACAGGATaGAGGGGGCAGAGCCGCAGAGGCAGGACGCCCGCCTCACTCGAG +
Preference number: 5 (lower is better)
Translates to: GSRWSCGWRGSSCTG*RGQSRRGRTPASLE
Trigger: CTCGAGTGAGGCGGGCGTCCTGCCTCTGCGGCTCTGCCCCCTGCATCCTGTGCAGCTGCTGCCCCGCCAGCCGCAACTCCACCGTGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536384.2
CDS GCA 90 bp CGCGACCGGGCACTCCCCGCGCACACCCGAACCTCCCTCGATTCCTaGTCTCCCAACCCAGAGTTCCGCCCGGTGGTCCGTGACGACCCG +
Preference number: 5 (lower is better)
Translates to: RDRALPAHTRTSLDS*SPNPEFRPVVRDDP
Trigger: CGGGTCGTCACGGACCACCGGGCGGAACTCTGGGTTGGGAGAGCAGGAATCGAGGGAGGTTCGGGTGTGCGCGGGGAGTGCCCGGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS GCA 90 bp GGCTCACGGTGGAGTTGCGGCTGGCGGGGCAGCAGCTGCACAGGATaGAGGGGGCAGAGCCGCAGAGGCAGGACGCCTTCAGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GSRWSCGWRGSSCTG*RGQSRRGRTPSAQF
Trigger: GAACTGGGCTGAAGGCGTCCTGCCTCTGCGGCTCTGCCCCCTGCATCCTGTGCAGCTGCTGCCCCGCCAGCCGCAACTCCACCGTGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS-3UTR CAA 90 bp GGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCCGGCTCACGGTGGAGTaGCGGCTGGCGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GTPGLQCRMPHCGGSSPLRLTVE*RLAGQQ
Trigger: CTGCTGCCCCGCCAGCCGCAACTCCACCGTGAGCCG...GAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCTCGCACTCCTCGGCCTaGCCCAGCCACCGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPSHSSA*PSHRWF
Trigger: GAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCGA...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGTCGCACTCCTCGGCCTaGCCCAGCCACCGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVSHSSA*PSHRWF
Trigger: GAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCGA...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS CCA 90 bp GGTAGCCAAGCAGGGAGCCACAGTCGATGTGGCCCTGCAGGACGGTaGGGATCCCGGCCCCCTCCTCACACACCCAGGGCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: GSQAGSHSRCGPAGR*GSRPPPHTPRAACR
Trigger: TCTACAAGCTGCCCTGGGTGTGTGAGGAGGGGGCCGGGATCCCCACCGTCCTGCAGGGCCACATCGACTGTGGCTCCCTGCTTGGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000487207.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp AGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTTCGCACTCCTCGGCCTaGCCCAGCCACCGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RKWAGSPGGRDQEHQGFSSHSSA*PSHRWF
Trigger: GAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCGA...ACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTGGGCGTCCTGGACCTaGGGCAGGACAGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRWASWT*GRTAAM
Trigger: CATCGCTGCTGTCCTGCCCAAGGTCCAGGACGCCCA...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCATGGGCGTCCTGGACCTaGGGCAGGACAGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAWASWT*GRTAAM
Trigger: CATCGCTGCTGTCCTGCCCAAGGTCCAGGACGCCCA...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAACGCCGTCCTGCTCGTaGTCAAAGGCCCGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPATPSCS*SKARPS
Trigger: TGAGGGCCGGGCCTTTGACAACGAGCAGGACGGCGT...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGACGCCGTCCTGCTCGTaGTCAAAGGCCCGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWTPSCS*SKARPS
Trigger: TGAGGGCCGGGCCTTTGACAACGAGCAGGACGGCGT...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGCGGGTCTCACCGGGCTaGTACCAGTTGGTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPRVSPG*YQLVSV
Trigger: GACGCTCACCAACTGGTACAAGCCCGGTGAGACCCG...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCAGCTGAAGTCGCGGTaGCGCAGGAGGAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFQLKSR*RRRSGA
Trigger: AGCCCCACTCCTCCTGCGCAACCGCGACTTCAGCTG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCCAGCTGAAGTCGCGGTaGCGCAGGAGGAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRQLKSR*RRRSGA
Trigger: AGCCCCACTCCTCCTGCGCAACCGCGACTTCAGCTG...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCCAGCTGAAGTCGCGGTaGCGCAGGAGGAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPQLKSR*RRRSGA
Trigger: AGCCCCACTCCTCCTGCGCAACCGCGACTTCAGCTG...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp CCGTCCTGCTCGTTGTCAAAGGCCCGGCCCTCACAGGCTGCCACCTaGTGCTGCTGCTGTGTGGCGTCTAGCATAGGTGGGCACTCCTCG +
Preference number: 5 (lower is better)
Translates to: PSCSLSKARPSQAAT*CCCCVASSIGGHSS
Trigger: CGAGGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGACAACGAGCAGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CCA 90 bp GAACCTCCCTCGATTCCTGCTCTCCCAACCCAGAGTTCCGCCCGGTaGTCCGTGACGACCCGCACCCGCCTCACTCGAGGGCAGCTAAGA +
Preference number: 5 (lower is better)
Translates to: EPPSIPALPTQSSAR*SVTTRTRLTRGQLR
Trigger: TCTTAGCTGCCCTCGAGTGAGGCGGGTGCGGGTCGTCACGGACCACCGGGCGGAACTCTGGGTTGGGAGAGCAGGAATCGAGGGAGGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS-3UTR CAA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCGGCTCACGGTGGAGTaGCGGCTGGCGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRLTVE*RLAGQQ
Trigger: CTGCTGCCCCGCCAGCCGCAACTCCACCGTGAGCCG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGGCTGATGAAGACCTaGCCCTCGTGGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFRLMKT*PSWQPL
Trigger: CAGCGGCTGCCACGAGGGCAAGGTCTTCATCAGCCT...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGAGGCTGATGAAGACCTaGCCCTCGTGGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVRLMKT*PSWQPL
Trigger: CAGCGGCTGCCACGAGGGCAAGGTCTTCATCAGCCT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGATGGGCGTCCTGGACCTaGGGCAGGACAGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGWASWT*GRTAAM
Trigger: CATCGCTGCTGTCCTGCCCAAGGTCCAGGACGCCCA...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAACGCCGTCCTGCTCGTaGTCAAAGGCCCGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGTPSCS*SKARPS
Trigger: TGAGGGCCGGGCCTTTGACAACGAGCAGGACGGCGT...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAACGCCGTCCTGCTCGTaGTCAAAGGCCCGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGTPSCS*SKARPS
Trigger: TGAGGGCCGGGCCTTTGACAACGAGCAGGACGGCGT...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp TGCTCGTTGTCAAAGGCCCGGCCCTCACAGGCTGCCACCTGCTGCTaGTGCTGTGTGGCGTCTAGCATAGGTGGGCACTCCTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: CSLSKARPSQAATCC*CCVASSIGGHSSVC
Trigger: GCAGACCGAGGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGACAACGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp TCCTGCTCGTTGTCAAAGGCCCGGCCCTCACAGGCTGCCACCTGCTaGTGCTGCTGTGTGGCGTCTAGCATAGGTGGGCACTCCTCGGTC +
Preference number: 5 (lower is better)
Translates to: SCSLSKARPSQAATC*CCCVASSIGGHSSV
Trigger: GACCGAGGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGACAACGAGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGCCGGGCTTGTACCAGTaGGTGAGCGTCATCATGACG +
Preference number: 5 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPPGLYQ*VSVIMT
Trigger: CGTCATGATGACGCTCACCAACTGGTACAAGCCCGG...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGACGGGTCTCACCGGGCTaGTACCAGTTGGTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGRVSPG*YQLVSV
Trigger: GACGCTCACCAACTGGTACAAGCCCGGTGAGACCCG...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACGGGTCTCACCGGGCTaGTACCAGTTGGTGAGCGTC +
Preference number: 5 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGRVSPG*YQLVSV
Trigger: GACGCTCACCAACTGGTACAAGCCCGGTGAGACCCG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp TCGTTGTCAAAGGCCCGGCCCTCACAGGCTGCCACCTGCTGCTGCTaGTGTGTGGCGTCTAGCATAGGTGGGCACTCCTCGGTCTGCATC +
Preference number: 5 (lower is better)
Translates to: SLSKARPSQAATCCC*CVASSIGGHSSVCI
Trigger: GATGCAGACCGAGGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGACAACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CCA 90 bp ACAGGATGCAGGGGGCAGAGCCGCAGAGGCAGGACGCTGTGTGGCTaGGTCCGGGTGACTCCTCCTCTCTCAGCCTCATGCTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: TGCRGQSRRGRTLCG*VRVTPPLSASCFSS
Trigger: TGATGAGAAGCATGAGGCTGAGAGAGGAGGAGTCACCCGGACCCAGCCACACAGCGTCCTGCCTCTGCGGCTCTGCCCCCTGCATCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CAA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCCGTTGCCCAGCTGGGTaGGCAAATGGGGGTTGCATT +
Preference number: 5 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRRCPAG*ANGGCI
Trigger: AATGCAACCCCCATTTGCCAACCCAGCTGGGCAACG...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGCGTTGCCCAGCTGGGTaGGCAAATGGGGGTTGCATT +
Preference number: 5 (lower is better)
Translates to: LGDVTRNTRASVPDAPLWRCPAG*ANGGCI
Trigger: AATGCAACCCCCATTTGCCAACCCAGCTGGGCAACG...CCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCACCGGGCTTGTACCAGTaGGTGAGCGTCATCATGACG +
Preference number: 5 (lower is better)
Translates to: GLQCRMPHCGGSSPLSPAPGLYQ*VSVIMT
Trigger: CGTCATGATGACGCTCACCAACTGGTACAAGCCCGG...TGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCCCGGGCTTGTACCAGTaGGTGAGCGTCATCATGACG +
Preference number: 5 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFPGLYQ*VSVIMT
Trigger: CGTCATGATGACGCTCACCAACTGGTACAAGCCCGG...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGAATGAGAGCTTGGGATaGGGGGAGCATCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPNESLG*GEHLGR
Trigger: TCTCCCCAGATGCTCCCCCAATCCCAAGCTCTCATT...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CAA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAGATGTGTGCCGGCTTaGAGCCCTCCTATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPRCVPA*SPPIPW
Trigger: CCAAGGGATAGGAGGGCTCAAAGCCGGCACACATCT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS TCA 90 bp GTGAGGCCAGCACCAGGCAGAAGTGGAAGAAGGAGTAGCTGTAGGTaGCGCCGTCCTGCTCGTTGTCAAAGGCCCGGCCCTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: VRPAPGRSGRRSSCR*RRPARCQRPGPHRL
Trigger: CAGCCTGTGAGGGCCGGGCCTTTGACAACGAGCAGGACGGCGTCACCTACAGCTACTCCTTCTTCCACTTCTGCCTGGTGCTGGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp TGCTGCTGCTGTGTGGCGTCTAGCATAGGTGGGCACTCCTCGGTCTaGATCAGGCTGTTCACCTGCCGGTGGTCTGAGGAGCGCAGACTG +
Preference number: 5 (lower is better)
Translates to: CCCCVASSIGGHSSV*IRLFTCRWSEERRL
Trigger: CAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGACGTTGCCCAGCTGGGTaGGCAAATGGGGGTTGCATT +
Preference number: 5 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGRCPAG*ANGGCI
Trigger: AATGCAACCCCCATTTGCCAACCCAGCTGGGCAACG...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGACCGGGCTTGTACCAGTaGGTGAGCGTCATCATGACG +
Preference number: 5 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGPGLYQ*VSVIMT
Trigger: CGTCATGATGACGCTCACCAACTGGTACAAGCCCGG...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCGGACCCTGAAGGCACTACGACTAGAAGGCCCGGCTCAGGGGCAGGTCCTGGAGAGCCCTCCTATCCCTaGGGCTTCGCTGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: SDPEGTTTRRPGSGAGPGEPSYP*GFAVCT
Trigger: AGTACAGACAGCGAAGCCCAAGGGATAGGAGGGCTC...TCCAGGACCTGCCCCTGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS-3UTR CAA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGCCTTTACTCCCAGATTaGAACCTCCTGCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVPLLPD*NLLHGA
Trigger: GGCCCCATGCAGGAGGTTCAAATCTGGGAGTAAAGG...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGAGGCTGATGAAGACCTaGCCCTCGTGGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRLMKT*PSWQPL
Trigger: CAGCGGCTGCCACGAGGGCAAGGTCTTCATCAGCCT...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGACACAGAAGGTGAGGTaGAGGCTGATGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPTQKVR*RLMKTL
Trigger: CAAGGTCTTCATCAGCCTCAACCTCACCTTCTGTGT...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp TCTAGCATAGGTGGGCACTCCTCGGTCTGCATCAGGCTGTTCACCTaGCGGTGGTCTGAGGAGCGCAGACTGATGAAGAGGGTGCACAGG +
Preference number: 5 (lower is better)
Translates to: SSIGGHSSVCIRLFT*RWSEERRLMKRVHR
Trigger: CCTGTGCACCCTCTTCATCAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCCACCTATGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp CCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGACACAGAAGGTGAGGTaGAGGCTGATGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: PGGRDQEHQGFSAGCPTVTQKVR*RLMKTL
Trigger: CAAGGTCTTCATCAGCCTCAACCTCACCTTCTGTGT...CACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCACACAGAAGGTGAGGTaGAGGCTGATGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFTQKVR*RLMKTL
Trigger: CAAGGTCTTCATCAGCCTCAACCTCACCTTCTGTGT...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp AGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGTTGGCAAATGGGGGTaGCATTTCTGTTCAGGGATA +
Preference number: 5 (lower is better)
Translates to: SGQGPLGDVTRNTRASVPVGKWG*HFCSGI
Trigger: TATCCCTGAACAGAAATGCAACCCCCATTTGCCAAC...CGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCTCTCTCCAGCAGCCCAAAGAGCTTCATTTCTaGGTGTCCTGGCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: FSAGCPTVVGVPRSLQQPKELHF*VSWPAH
Trigger: ATGGGCTGGCCAGGACACCAAGAAATGAAGCTCTTT...GGGCTGCTGGAGAGAGCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS-3UTR CAA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGTTGGCAAATGGGGGTaGCATTTCTGTTCAGGGATA +
Preference number: 5 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRVGKWG*HFCSGI
Trigger: TATCCCTGAACAGAAATGCAACCCCCATTTGCCAAC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGCGTTGCCCAGCTGGGTaGGCAAATGGGGGTTGCATT +
Preference number: 5 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGRCPAG*ANGGCI
Trigger: AATGCAACCCCCATTTGCCAACCCAGCTGGGCAACG...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTGGCAAATGGGGGTaGCATTTCTGTTCAGGGATA +
Preference number: 5 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGVGKWG*HFCSGI
Trigger: TATCCCTGAACAGAAATGCAACCCCCATTTGCCAAC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS TCA 90 bp TCTCATCATCCTCCCGTCCATGAGGACTCAGATGTGTGCCGGCTTTaGGCCCTCCTATCCCTTGGGCTTCGCTGTCTGTACTGGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SHHPPVHEDSDVCRL*ALLSLGLRCLYWPL
Trigger: TAGAGGCCAGTACAGACAGCGAAGCCCAAGGGATAGGAGGGCTCAAAGCCGGCACACATCTGAGTCCTCATGGACGGGAGGATGATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS GCA 90 bp CAATGCAGGTGCAACCGATGGAAATCAGGTCCACTGTGGAAGCTCTaGCTCCCTCACCAGGAAGCAAACCCTTGTTGGCAGAGACCTGGC +
Preference number: 5 (lower is better)
Translates to: QCRCNRWKSGPLWKL*LPHQEANPCWQRPG
Trigger: GCCAGGTCTCTGCCAACAAGGGTTTGCTTCCTGGTGAGGGAGGCAGAGCTTCCACAGTGGACCTGATTTCCATCGGTTGCACCTGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 90 bp CTGGCCAGCCCATCAGCCTTTACTCCCAGATTTGAACCTCCTGCATaGGGCCAGAGTAGCTCTGTCTCTTGCACCCCCAAAAGCACAGTC +
Preference number: 5 (lower is better)
Translates to: LASPSAFTPRFEPPA*GQSSSVSCTPKSTV
Trigger: GACTGTGCTTTTGGGGGTGCAAGAGACAGAGCTACTCTGGCCCCATGCAGGAGGTTCAAATCTGGGAGTAAAGGCTGATGGGCTGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS GCA 90 bp CTTTGGGCTGGGAGGGATTTCAGGCACCAGCTTGATTCCTCCTCCTaGACACGCACATGCACACGCACACACACACACGAAAAATGGAGG +
Preference number: 5 (lower is better)
Translates to: LWAGRDFRHQLDSSS*TRTCTRTHTHEKWR
Trigger: CCTCCATTTTTCGTGTGTGTGTGTGCGTGTGCATGTGCGTGTGCAGGAGGAGGAATCAAGCTGGTGCCTGAAATCCCTCCCAGCCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 90 bp TCCTCCTGCACACGCACATGCACACGCACACACACACACGAAAAATaGAGGCCTAATGAGGCGAGAGGCTCTCTTGCCTCTCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: SSCTRTCTRTHTHEK*RPNEARGSLASLCC
Trigger: ACAGCACAGAGAGGCAAGAGAGCCTCTCGCCTCATTAGGCCTCCATTTTTCGTGTGTGTGTGTGCGTGTGCATGTGCGTGTGCAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS-3UTR CAA 90 bp CAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGTTCCCCGCGGTACACGCACTGGCTaGTTTATTAGAAAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: QEHQGFSAGCPTVVGVPRGTRTG*FIRKSL
Trigger: AAGACTTTTTCTAATAAACAAGCCAGTGCGTGTACC...GCGGGGAACTCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS-3UTR CAA 90 bp TCCAGGAAGTGGGCAGGGTCCCCTGGGGGACGTGACCAGGAACACCAGGGCTTCGGTACACGCACTGGCTaGTTTATTAGAAAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: SRKWAGSPGGRDQEHQGFGTRTG*FIRKSL
Trigger: AAGACTTTTTCTAATAAACAAGCCAGTGCGTGTACC...GAAGCCCTGGTGTTCCTGGTCACGTCCCCCAGGGGACCCTGCCCACTTCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS GCA 90 bp AGGGATTTCAGGCACCAGCTTGATTCCTCCTCCTGCACACGCACATaGACACGCACACACACACACGAAAAATGGAGGCCTAATGAGGCG +
Preference number: 5 (lower is better)
Translates to: RDFRHQLDSSSCTRT*TRTHTHEKWRPNEA
Trigger: CGCCTCATTAGGCCTCCATTTTTCGTGTGTGTGTGTGCGTGTGCATGTGCGTGTGCAGGAGGAGGAATCAAGCTGGTGCCTGAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS-3UTR CAA 90 bp GGACGTGACCAGGAACACCAGGGCTTCAGTGCCGGATGCCCCACTGTGGTGGGAGGTACACGCACTGGCTaGTTTATTAGAAAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: GRDQEHQGFSAGCPTVVGGTRTG*FIRKSL
Trigger: AAGACTTTTTCTAATAAACAAGCCAGTGCGTGTACC...TCCCACCACAGTGGGGCATCCGGCACTGAAGCCCTGGTGTTCCTGGTCACGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS TCA 90 bp TCACCAGGAAGCAAACCCTTGTTGGCAGAGACCTGGCCCAAACCTTaGATTCTTTGGGCTGGGAGGGATTTCAGGCACCAGCTTGATTCC +
Preference number: 5 (lower is better)
Translates to: SPGSKPLLAETWPKP*ILWAGRDFRHQLDS
Trigger: GGAATCAAGCTGGTGCCTGAAATCCCTCCCAGCCCAAAGAATTCAAGGTTTGGGCCAGGTCTCTGCCAACAAGGGTTTGCTTCCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS-3UTR CAA 90 bp GGACAAGGGAGCCCTTTCATCCGAGATGCTGAGTATGGGCAACAGGGAGGAGGGGGTACACGCACTGGCTaGTTTATTAGAAAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: GQGSPFIRDAEYGQQGGGGTRTG*FIRKSL
Trigger: AAGACTTTTTCTAATAAACAAGCCAGTGCGTGTACC...CCCTCCTCCCTGTTGCCCATACTCAGCATCTCGGATGAAAGGGCTCCCTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000536384.2
ENST00000536859.5
CDS CCA 90 bp GAATATGCATATAAGATAATGAGAGCTTGGGATTGGGGGAGCATCTaGGGAGAGGTATTCACATACGCACCATCCACTCTGCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EYAYKIMRAWDWGSI*GEVFTYAPSTLLSP
Trigger: TGGGGAGAGCAGAGTGGATGGTGCGTATGTGAATACCTCTCCCCAGATGCTCCCCCAATCCCAAGCTCTCATTATCTTATATGCATATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS TCA 90 bp ATCCCTTGGGCTTCGCTGTCTGTACTGGCCTCTATTTCCTGCTTCTaGCCCATTTACAGAGCAGGGCCATCCCTTATGAATATGCATATA +
Preference number: 5 (lower is better)
Translates to: IPWASLSVLASISCF*PIYRAGPSLMNMHI
Trigger: TATATGCATATTCATAAGGGATGGCCCTGCTCTGTAAATGGGTCAGAAGCAGGAAATAGAGGCCAGTACAGACAGCGAAGCCCAAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS CCA 90 bp AGCAGGGCCATCCCTTATGAATATGCATATAAGATAATGAGAGCTTaGGATTGGGGGAGCATCTGGGGAGAGGTATTCACATACGCACCA +
Preference number: 5 (lower is better)
Translates to: SRAIPYEYAYKIMRA*DWGSIWGEVFTYAP
Trigger: TGGTGCGTATGTGAATACCTCTCCCCAGATGCTCCCCCAATCCCAAGCTCTCATTATCTTATATGCATATTCATAAGGGATGGCCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS CCA 90 bp GCCATCCCTTATGAATATGCATATAAGATAATGAGAGCTTGGGATTaGGGGAGCATCTGGGGAGAGGTATTCACATACGCACCATCCACT +
Preference number: 5 (lower is better)
Translates to: AIPYEYAYKIMRAWD*GSIWGEVFTYAPST
Trigger: AGTGGATGGTGCGTATGTGAATACCTCTCCCCAGATGCTCCCCCAATCCCAAGCTCTCATTATCTTATATGCATATTCATAAGGGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS CCA 72 bp CCCTCCCCTCTGCGGCTGCAGCTACAGAACAGAGGTTaGCCTCCCCACAGGTCCCGAACCCGCGACCGGGCA +
Preference number: 6 (lower is better)
Translates to: PSPLRLQLQNRG*PPHRSRTRDRA
Trigger: TGCCCGGTCGCGGGTTCGGGACCTGTGGGGAGGCCAACCTCTGTTCTGTAGCTGCAGCCGCAGAGGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS GCA 72 bp GCACTCCCCGCGCACACCCGAACCTCCCTCGATTCCTaGTCTCCCAACCCAGAGTTCCGCCCGGTGGTCCGT +
Preference number: 6 (lower is better)
Translates to: ALPAHTRTSLDS*SPNPEFRPVVR
Trigger: ACGGACCACCGGGCGGAACTCTGGGTTGGGAGAGCAGGAATCGAGGGAGGTTCGGGTGTGCGCGGGGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 72 bp TCGATTCCTGCTCTCCCAACCCAGAGTTCCGCCCGGTaGTCCGTGACGACCCGCACCCGCCTCACTCGAGGG +
Preference number: 6 (lower is better)
Translates to: SIPALPTQSSAR*SVTTRTRLTRG
Trigger: CCCTCGAGTGAGGCGGGTGCGGGTCGTCACGGACCACCGGGCGGAACTCTGGGTTGGGAGAGCAGGAATCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS GCA 72 bp AAGGCCCGGCCCTCACAGGCTGCCACCTGCTGCTGCTaGTGTGTGGCGTCTAGCATAGGTGGGCACTCCTCG +
Preference number: 6 (lower is better)
Translates to: KARPSQAATCCC*CVASSIGGHSS
Trigger: CGAGGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CAA 72 bp TGGCAGGCTGTGAGGCTGCCTCAGCTGAAGTCGCGGTaGCGCAGGAGGAGTGGGGCTACCAGGGTCCACAGG +
Preference number: 6 (lower is better)
Translates to: WQAVRLPQLKSR*RRRSGATRVHR
Trigger: CCTGTGGACCCTGGTAGCCCCACTCCTCCTGCGCAACCGCGACTTCAGCTGAGGCAGCCTCACAGCCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp CTGCGTACCAGGCACGGGAATCGCACTCCTCGGCCTTaGCCAGCCACCGCTGGTTCCAGGAGTGCGCAAAGT +
Preference number: 6 (lower is better)
Translates to: LRTRHGNRTPRP*PATAGSRSAQS
Trigger: ACTTTGCGCACTCCTGGAACCAGCGGTGGCTGGGCAAGGCCGAGGAGTGCGATTCCCGTGCCTGGTACGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp TCAAAGGCCCGGCCCTCACAGGCTGCCACCTGCTGCTaGTGCTGTGTGGCGTCTAGCATAGGTGGGCACTCC +
Preference number: 6 (lower is better)
Translates to: SKARPSQAATCC*CCVASSIGGHS
Trigger: GGAGTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp GGCATCCCACCACTGGGTCTCATAGCCCTCGGGGCCTaGCACAACTGTCTCGTTGCCCAGCTGGGTTGGCAA +
Preference number: 6 (lower is better)
Translates to: GIPPLGLIALGA*HNCLVAQLGWQ
Trigger: TTGCCAACCCAGCTGGGCAACGAGACAGTTGTGGCAGGCCCCGAGGGCTATGAGACCCAGTGGTGGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp TTGTCAAAGGCCCGGCCCTCACAGGCTGCCACCTGCTaGTGCTGCTGTGTGGCGTCTAGCATAGGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: LSKARPSQAATC*CCCVASSIGGH
Trigger: GTGCCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp TCGTTGTCAAAGGCCCGGCCCTCACAGGCTGCCACCTaGTGCTGCTGCTGTGTGGCGTCTAGCATAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SLSKARPSQAAT*CCCCVASSIGG
Trigger: CCCACCTATGCTAGACGCCACACAGCAGCAGCAGCAGGTGGCAGCCTGTGAGGGCCGGGCCTTTGACAACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp GGTGGGCACTCCTCGGTCTGCATCAGGCTGTTCACCTaGCGGTGGTCTGAGGAGCGCAGACTGATGAAGAGG +
Preference number: 6 (lower is better)
Translates to: GGHSSVCIRLFT*RWSEERRLMKR
Trigger: CCTCTTCATCAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS TCA 72 bp CTCGGTCTGCATCAGGCTGTTCACCTGCCGGTGGTCTaGGGAGCGCAGACTGATGAAGAGGGTGCACAGGAG +
Preference number: 6 (lower is better)
Translates to: LGLHQAVHLPVV*GAQTDEEGAQE
Trigger: CTCCTGTGCACCCTCTTCATCAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGATGCAGACCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS TCA 72 bp GCACCAGGCAGAAGTGGAAGAAGGAGTAGCTGTAGGTaGCGCCGTCCTGCTCGTTGTCAAAGGCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: APGRSGRRSSCR*RRPARCQRPGP
Trigger: AGGGCCGGGCCTTTGACAACGAGCAGGACGGCGTCACCTACAGCTACTCCTTCTTCCACTTCTGCCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp TGTGTGGCGTCTAGCATAGGTGGGCACTCCTCGGTCTaGATCAGGCTGTTCACCTGCCGGTGGTCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: CVASSIGGHSSV*IRLFTCRWSEE
Trigger: CTCCTCAGACCACCGGCAGGTGAACAGCCTGATGCAGACCGAGGAGTGCCCACCTATGCTAGACGCCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CCA 72 bp CCCTCGGGGCCTGCCACAACTGTCTCGTTGCCCAGCTaGGTTGGCAAATGGGGGTTGCATTTCTGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PSGPATTVSLPS*VGKWGLHFCSG
Trigger: CCCTGAACAGAAATGCAACCCCCATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGGCAGGCCCCGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CCA 72 bp CACTCCTCGGTCTGCATCAGGCTGTTCACCTGCCGGTaGTCTGAGGAGCGCAGACTGATGAAGAGGGTGCAC +
Preference number: 6 (lower is better)
Translates to: HSSVCIRLFTCR*SEERRLMKRVH
Trigger: GTGCACCCTCTTCATCAGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGATGCAGACCGAGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS TCA 72 bp TGGCACAGATCTTCACCCACACGGCGGTCCACGTGCTaGTCATCTTCCGGGTCTCACCGGGCTTGTACCAGT +
Preference number: 6 (lower is better)
Translates to: WHRSSPTRRSTC*SSSGSHRACTS
Trigger: ACTGGTACAAGCCCGGTGAGACCCGGAAGATGATCAGCACGTGGACCGCCGTGTGGGTGAAGATCTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS TCA 72 bp CCTCCCGTCCATGAGGACTCAGATGTGTGCCGGCTTTaGGCCCTCCTATCCCTTGGGCTTCGCTGTCTGTAC +
Preference number: 6 (lower is better)
Translates to: PPVHEDSDVCRL*ALLSLGLRCLY
Trigger: GTACAGACAGCGAAGCCCAAGGGATAGGAGGGCTCAAAGCCGGCACACATCTGAGTCCTCATGGACGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS CAA 90 bp CATAGCCCTCGGGGCCTGCCACAACTGTCTCGTTGCCCAGCTGGGTaGGCAAATGGGGGTTGCATTTCTGTTCAGGGATACTGGATAGGG +
Preference number: 6 (lower is better)
Translates to: HSPRGLPQLSRCPAG*ANGGCISVQGYWIG
Trigger: CCCTATCCAGTATCCCTGAACAGAAATGCAACCCCCATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGGCAGGCCCCGAGGGCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS GCA 72 bp GGGAGGGATTTCAGGCACCAGCTTGATTCCTCCTCCTaGACACGCACATGCACACGCACACACACACACGAA +
Preference number: 6 (lower is better)
Translates to: GRDFRHQLDSSS*TRTCTRTHTHE
Trigger: TTCGTGTGTGTGTGTGCGTGTGCATGTGCGTGTGCAGGAGGAGGAATCAAGCTGGTGCCTGAAATCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 72 bp GGGGCCTGCCACAACTGTCTCGTTGCCCAGCTGGGTTaGCAAATGGGGGTTGCATTTCTGTTCAGGGATACT +
Preference number: 6 (lower is better)
Translates to: GACHNCLVAQLG*QMGVAFLFRDT
Trigger: AGTATCCCTGAACAGAAATGCAACCCCCATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGGCAGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CAA 72 bp GTGTCCTGGCCAGCCCATCAGCCTTTACTCCCAGATTaGAACCTCCTGCATGGGGCCAGAGTAGCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: VSWPAHQPLLPD*NLLHGARVALS
Trigger: AGACAGAGCTACTCTGGCCCCATGCAGGAGGTTCAAATCTGGGAGTAAAGGCTGATGGGCTGGCCAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487207.5
ENST00000536859.5
CDS CAA 90 bp TCCATGAGGACTCAGATGTGTGCCGGCTTTGAGCCCTCCTATCCCTaGGGCTTCGCTGTCTGTACTGGCCTCTATTTCCTGCTTCTGACC +
Preference number: 6 (lower is better)
Translates to: SMRTQMCAGFEPSYP*GFAVCTGLYFLLLT
Trigger: GGTCAGAAGCAGGAAATAGAGGCCAGTACAGACAGCGAAGCCCAAGGGATAGGAGGGCTCAAAGCCGGCACACATCTGAGTCCTCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS GCA 72 bp AGGCACCAGCTTGATTCCTCCTCCTGCACACGCACATaGACACGCACACACACACACGAAAAATGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: RHQLDSSSCTRT*TRTHTHEKWRP
Trigger: AGGCCTCCATTTTTCGTGTGTGTGTGTGCGTGTGCATGTGCGTGTGCAGGAGGAGGAATCAAGCTGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS GCA 72 bp TGCAACCGATGGAAATCAGGTCCACTGTGGAAGCTCTaGCTCCCTCACCAGGAAGCAAACCCTTGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: CNRWKSGPLWKL*LPHQEANPCWQ
Trigger: CTGCCAACAAGGGTTTGCTTCCTGGTGAGGGAGGCAGAGCTTCCACAGTGGACCTGATTTCCATCGGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 72 bp TCACCTTCAGCCCAGTTCCAATGCAGGTGCAACCGATaGAAATCAGGTCCACTGTGGAAGCTCTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: SPSAQFQCRCNR*KSGPLWKLCLP
Trigger: AGGGAGGCAGAGCTTCCACAGTGGACCTGATTTCCATCGGTTGCACCTGCATTGGAACTGGGCTGAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CAA 72 bp ACTCAGATGTGTGCCGGCTTTGAGCCCTCCTATCCCTaGGGCTTCGCTGTCTGTACTGGCCTCTATTTCCTG +
Preference number: 6 (lower is better)
Translates to: TQMCAGFEPSYP*GFAVCTGLYFL
Trigger: CAGGAAATAGAGGCCAGTACAGACAGCGAAGCCCAAGGGATAGGAGGGCTCAAAGCCGGCACACATCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS CCA 72 bp GCCACAACTGTCTCGTTGCCCAGCTGGGTTGGCAAATaGGGGTTGCATTTCTGTTCAGGGATACTGGATAGG +
Preference number: 6 (lower is better)
Translates to: ATTVSLPSWVGK*GLHFCSGILDR
Trigger: CCTATCCAGTATCCCTGAACAGAAATGCAACCCCCATTTGCCAACCCAGCTGGGCAACGAGACAGTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373709.8
ENST00000373710.5
ENST00000491976.1
ENST00000536384.2
ENST00000536859.5
CDS CCA 72 bp ACACGCACATGCACACGCACACACACACACGAAAAATaGAGGCCTAATGAGGCGAGAGGCTCTCTTGCCTCT +
Preference number: 6 (lower is better)
Translates to: TRTCTRTHTHEK*RPNEARGSLAS
Trigger: AGAGGCAAGAGAGCCTCTCGCCTCATTAGGCCTCCATTTTTCGTGTGTGTGTGTGCGTGTGCATGTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 72 bp CCATCAGCCTTTACTCCCAGATTTGAACCTCCTGCATaGGGCCAGAGTAGCTCTGTCTCTTGCACCCCCAAA +
Preference number: 6 (lower is better)
Translates to: PSAFTPRFEPPA*GQSSSVSCTPK
Trigger: TTTGGGGGTGCAAGAGACAGAGCTACTCTGGCCCCATGCAGGAGGTTCAAATCTGGGAGTAAAGGCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536859.5
CDS TCA 72 bp GCTTCGCTGTCTGTACTGGCCTCTATTTCCTGCTTCTaGCCCATTTACAGAGCAGGGCCATCCCTTATGAAT +
Preference number: 6 (lower is better)
Translates to: ASLSVLASISCF*PIYRAGPSLMN
Trigger: ATTCATAAGGGATGGCCCTGCTCTGTAAATGGGTCAGAAGCAGGAAATAGAGGCCAGTACAGACAGCGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373710.5
CDS CAA 72 bp ACGAAAAATGGAGGCCTAATGAGGCGAGAGGCTCTCTaGCCTCTCTGTGCTGTCTATGCTGATCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: TKNGGLMRREAL*PLCAVYADLIL
Trigger: GAGAATGAGATCAGCATAGACAGCACAGAGAGGCAAGAGAGCCTCTCGCCTCATTAGGCCTCCATTTTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CAA 90 bp CACACACACACGAAAAATGGAGGCCTAATGAGGCGAGAGGCTCTCTaGCCTCTCTGTGCTGTCTATGCTGATCTCATTCTCAGAAAAAGG +
Preference number: 6 (lower is better)
Translates to: HTHTKNGGLMRREAL*PLCAVYADLILRKR
Trigger: CCTTTTTCTGAGAATGAGATCAGCATAGACAGCACAGAGAGGCAAGAGAGCCTCTCGCCTCATTAGGCCTCCATTTTTCGTGTGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491976.1
CDS CCA 72 bp ATCCCTTATGAATATGCATATAAGATAATGAGAGCTTaGGATTGGGGGAGCATCTGGGGAGAGGTATTCACA +
Preference number: 6 (lower is better)
Translates to: IPYEYAYKIMRA*DWGSIWGEVFT
Trigger: TGTGAATACCTCTCCCCAGATGCTCCCCCAATCCCAAGCTCTCATTATCTTATATGCATATTCATAAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373710.5