Pregenerated sensors for SERINC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000111897Ensembl transcript IDs: ENST00000339697.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTATAAACCATGTTCTTTaGAGTATCCTGCCAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTINHVL*SILPGN Trigger: GTTGCCTGGCAGGATACTGCAAAGAACATGGTTTAT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTTCATGCCAGAACACTaGAGAAGTTACATGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYFMPEH*RSYMGS Trigger: GCTTCCCATGTAACTTCTCCAGTGTTCTGGCATGAA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACAACAGTTCACTTTGTTaGCAAAGGCCATCTCTACCC | + |
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Preference number: 2 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYNSSLC*QRPSLP Trigger: GGGTAGAGATGGCCTTTGCCAACAAAGTGAACTGTT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTTCTTTGCAGTATCCTaGCAGGCAACACATCAAATA | + |
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Preference number: 2 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYFFAVS*QATHQI Trigger: TATTTGATGTGTTGCCTGGCAGGATACTGCAAAGAA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACACTGGAGAAGTTACATaGGAAGCAAAAACATACACA | + |
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Preference number: 2 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYTGEVT*EAKTYT Trigger: TGTGTATGTTTTTGCTTCCCATGTAACTTCTCCAGT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACGTAAAATCTAATTCATaGCAGAACACTGGAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYVKSNS*QNTGEV Trigger: AACTTCTCCAGTGTTCTGGCATGAATTAGATTTTAC...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| 3UTR-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCAATAAACCATGTTCTTaGCAGTATCCTGCCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTNKPCS*QYPARQ Trigger: TTGCCTGGCAGGATACTGCAAAGAACATGGTTTATT...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTGTATCCAGCTCGCCATaGAGCACAGCCCCAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTVSSSP*STAPGR Trigger: GCGTCCTGGGGCTGTGCTCCATGGCGAGCTGGATAC...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACATGCCACCACTGGACTaGCTGCCCTTCCTTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYMPPLD*LPFLWD Trigger: GTCCCAAAGGAAGGGCAGTCAGTCCAGTGGTGGCAT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCGTCCCCATCCTCCAGTaGTCCATCACTTCTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTVPILQ*SITSSS Trigger: GGAGCTAGAAGTGATGGATCACTGGAGGATGGGGAC...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCTTGCCCAGGCTAGAGTaGAGTGACGTGACCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTLPRLE*SDVTLA Trigger: AGCCAAGGTCACGTCACTGCACTCTAGCCTGGGCAA...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCACCACTGGACTGACTaGCCTTCCTTTGGGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYHHWTD*PSFGTV Trigger: CACTGTCCCAAAGGAAGGGCAGTCAGTCCAGTGGTG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCCAGACAGCTGTCCACTaGCTTTTCATCTCACGAGAG | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTQTAVH*LFISRE Trigger: CTCTCGTGAGATGAAAAGTCAGTGGACAGCTGTCTG...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCGAACGCCTTGTTTTCTaGACAACTGGCTGGATGAGT | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTERLVF*TTGWMS Trigger: ACTCATCCAGCCAGTTGTTCAGAAAACAAGGCGTTC...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCCTGTTTATGGGTCATaGTGGACACCAGCAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYPVYGS*WTPAIH Trigger: GTGGATTGCTGGTGTCCAGCATGACCCATAAACAGG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCTTCTGACCTGTTTATaGGTCATGCTGGACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYLLTCL*VMLDTS Trigger: GCTGGTGTCCAGCATGACCCATAAACAGGTCAGAAG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACAGTCCTATAATTCCTTaGGCATGCCACCACTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYSPIIP*ACHHWT Trigger: AGTCCAGTGGTGGCATGCTCAAGGAATTATAGGACT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACACTTCCACACAAACATaGTATCCAGCTCGCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYTSTQT*YPARHG Trigger: TCCATGGCGAGCTGGATACCATGTTTGTGTGGAAGT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCCGATGCCAATCCAACTaGAAGAGATTTTCACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTRCQSN*KRFSPR Trigger: TCTGGGTGAAAATCTCTTCCAGTTGGATTGGCATCG...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTTCATGCCAGAACACTaGAGAAGTTACATGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTFMPEH*RSYMGS Trigger: GCTTCCCATGTAACTTCTCCAGTGTTCTGGCATGAA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCAACAGTTCACTTTGTTaGCAAAGGCCATCTCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTNSSLC*QRPSLP Trigger: GGGTAGAGATGGCCTTTGCCAACAAAGTGAACTGTT...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCCTGGTCTTGAATTCCTaGGCTCAAGTAATCTACCCA | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTLVLNS*AQVIYP Trigger: TGGGTAGATTACTTGAGCCCAGGAATTCAAGACCAG...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTAACCAAAATCCATTGTaGACTGCAGCTCTAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTNQNPL*TAALGS Trigger: TGATCCTAGAGCTGCAGTGCACAATGGATTTTGGTT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCAAACATACAGCACGATaGCAATCCAACTGGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTKHTAR*QSNWKR Trigger: TCTCTTCCAGTTGGATTGGCATCGTGCTGTATGTTT...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTATTTGTAAGAACAAGTaGTGCCACGAGTGTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTICKNK*CHECPN Trigger: GTTTGGACACTCGTGGCACCACTTGTTCTTACAAAT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACACCAGATCTTGGTTGTaGTTCTTGGATTTTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYTRSWL*FLDFWQ Trigger: CTGCCAAAAATCCAAGAATCACAACCAAGATCTGGT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACATTCCATCATTCTTCTaGCCTGTTTATGGGTCATGC | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYIPSFF*PVYGSC Trigger: GCATGACCCATAAACAGGTCAGAAGAATGATGGAAT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACGAAACAAAAGGCACCTaGCATGCCTACATAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYETKGT*HAYIKP Trigger: TGGTTTTATGTAGGCATGGCAGGTGCCTTTTGTTTC...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCTTCCTTTGGGACAGTaGTTGTTGTATTGTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYLPLGQ*LLYCSQ Trigger: TTGGCTACAATACAACAAGCACTGTCCCAAAGGAAG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTGTAAGAACAAGTGGTaGCACGAGTGTCCAAACATA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYCKNKW*HECPNI Trigger: TATGTTTGGACACTCGTGGCACCACTTGTTCTTACA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTTCTTTGCAGTATCCTaGCAGGCAACACATCAAATA | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTFFAVS*QATHQI Trigger: TATTTGATGTGTTGCCTGGCAGGATACTGCAAAGAA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTGTTTTCTGAACAACTaGCTGGATGAGTGTAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTCFLNN*LDECSR Trigger: TCTACTACACTCATCCAGCCAGTTGTTCAGAAAACA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTCCACGATTCATTCCATaGATGTGCAAAATCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTPRFIP*MCKINK Trigger: CTTATTGATTTTGCACATTCATGGAATGAATCGTGG...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACAACCTGACTATTGTTTaGAGTACGGATGCTGGAATA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYNLTIV*STDAGI Trigger: TATTCCAGCATCCGTACTTCAAACAATAGTCAGGTT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTGTCAGTTTATTAACCTaGCTATTGTTTGAAGTACGG | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTVSLLT*LLFEVR Trigger: CCGTACTTCAAACAATAGTCAGGTTAATAAACTGAC...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTAGGAATAACTGTAAGTaGCACCATCCCTTTCATTAT | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTRNNCK*HHPFHY Trigger: ATAATGAAAGGGATGGTGTCACTTACAGTTATTCCT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTCTTCCTTCTAACCCATaGTTATCCTTTTCAAAACCT | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTLPSNP*LSFSKP Trigger: AGGTTTTGAAAAGGATAATCATGGGTTAGAAGGAAG...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTATTGTAGCCAATTATaGTTAGTAGACTTGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTYCSQL*LVDLGC Trigger: GCAACCCAAGTCTACTAAGCATAATTGGCTACAATA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTTGTTCTTCCATTCCTaGTATCAACATTACACAAGC | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTLFFHS*YQHYTS Trigger: GCTTGTGTAATGTTGATACCAGGAATGGAAGAACAA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTGTAAAAGTTCCTTCTaGAATGAAGAATGCCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTCKSSF*NEECPN Trigger: ATTGGGGCATTCTTCATTCCAGAAGGAACTTTTACA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCACTGGAGAAGTTACATaGGAAGCAAAAACATACACA | + |
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Preference number: 4 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTTGEVT*EAKTYT Trigger: TGTGTATGTTTTTGCTTCCCATGTAACTTCTCCAGT...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTTCATTGGTCATAGCTaGCCATGTCAAATACATTGT | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYFIGHS*PCQIHC Trigger: ACAATGTATTTGACATGGTCAGCTATGACCAATGAA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCATCATGATATAAAGTaGAGCCAGGAAAAGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYHHDIK*SQEKHE Trigger: TTCATGCTTTTCCTGGCTTCACTTTATATCATGATG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTTAGTAGACTTGGGTTaGAATTTGTTTCTGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTLVDLG*NLFLVH Trigger: ATGAACCAGAAACAAATTGCAACCCAAGTCTACTAA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTGTTTGAAGTACGGATaGTGGAATAAAATACACACA | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTCLKYG*WNKIHT Trigger: TGTGTGTATTTTATTCCAGCATCCGTACTTCAAACA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR GCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTGTAAAATCTAATTCATaGCAGAACACTGGAGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTVKSNS*QNTGEV Trigger: AACTTCTCCAGTGTTCTGGCATGAATTAGATTTTAC...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTAGCCATTCAAAATTGTaGAATACAATGTCTACACAC | + |
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Preference number: 4 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTSHSKL*NTMSTH Trigger: GTGTGTAGACATTGTATTCCACAATTTTGAATGGCT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CCA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTTGAAGTACGGATGCTaGAATAAAATACACACAACA | + |
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Preference number: 4 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYLKYGC*NKIHTT Trigger: TGTTGTGTGTATTTTATTCCAGCATCCGTACTTCAA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS GCA 90 bp | CTTGAGCATGCCACCACTGGACTGACTGCCCTTCCTTTGGGACAGTaGTTGTTGTATTGTAGCCAATTATGCTTAGTAGACTTGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: LEHATTGLTALPLGQ*LLYCSQLCLVDLGC Trigger: GCAACCCAAGTCTACTAAGCATAATTGGCTACAATACAACAAGCACTGTCCCAAAGGAAGGGCAGTCAGTCCAGTGGTGGCATGCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS TCA 90 bp | ACCAACGCAGAGGAGCATGTTGACACTGATGAACGCCTTGTTTTCTaGACAACTGGCTGGATGAGTGTAGTAGACAAAGAACAGGACGAT | + |
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Preference number: 5 (lower is better) Translates to: TNAEEHVDTDERLVF*TTGWMSVVDKEQDD Trigger: ATCGTCCTGTTCTTTGTCTACTACACTCATCCAGCCAGTTGTTCAGAAAACAAGGCGTTCATCAGTGTCAACATGCTCCTCTGCGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS TCA 90 bp | ATGCCAATCCAACTGGAAGAGATTTTCACCCAGACAGCTGTCCACTaGCTTTTCATCTCACGAGAGGGTTCATACCTGTACCAGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: MPIQLEEIFTQTAVH*LFISREGSYLYQLV Trigger: TACCAACTGGTACAGGTATGAACCCTCTCGTGAGATGAAAAGTCAGTGGACAGCTGTCTGGGTGAAAATCTCTTCCAGTTGGATTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTGCAGTGACGTGACCTaGGCTCACTGCAACCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYCSDVT*AHCNLC Trigger: GCAGAGGTTGCAGTGAGCCAAGGTCACGTCACTGCA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTACGCAGAGGAGCATGTaGACACTGATGAACGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTTQRSM*TLMNAL Trigger: CAAGGCGTTCATCAGTGTCAACATGCTCCTCTGCGT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCTGACTGCCCTTCCTTaGGGACAGTGCTTGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYLTALP*GQCLLY Trigger: ATACAACAAGCACTGTCCCAAAGGAAGGGCAGTCAG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS GCA 90 bp | ACTGCCCTTCCTTTGGGACAGTGCTTGTTGTATTGTAGCCAATTATaGTTAGTAGACTTGGGTTGCAATTTGTTTCTGGTTCATTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TALPLGQCLLYCSQL*LVDLGCNLFLVHWS Trigger: TGACCAATGAACCAGAAACAAATTGCAACCCAAGTCTACTAAGCATAATTGGCTACAATACAACAAGCACTGTCCCAAAGGAAGGGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCCTAGTTACAGTGGAGTaGTTTCCACTAGGACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTLVTVE*FPLGQH Trigger: ATGCTGTCCTAGTGGAAACAACTCCACTGTAACTAG...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCAAGAACCAAAATCCATaGTGCACTGCAGCTCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTKNQNP*CTAALG Trigger: TCCTAGAGCTGCAGTGCACAATGGATTTTGGTTCTT...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTCCAAAACAGTTCACTTaGTTGGCAAAGGCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTPKQFT*LAKAIS Trigger: AGAGATGGCCTTTGCCAACAAAGTGAACTGTTTTGG...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCCTAAAGCCTAGTGTTTaGCAGTTACTTCCTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTLKPSV*QLLPSL Trigger: CAGGGAAGGAAGTAACTGCAAAACACTAGGCTTTAG...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACACACTGATGAACGCCTaGTTTTCTGAACAACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYTLMNA*FSEQLA Trigger: AGCCAGTTGTTCAGAAAACAAGGCGTTCATCAGTGT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTTTGGGACAGTGCTTGTaGTATTGTAGCCAATTATGC | + |
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Preference number: 5 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTLGQCL*YCSQLC Trigger: GCATAATTGGCTACAATACAACAAGCACTGTCCCAA...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | CAATTTAGTACCGACACCTCCATCCATAACCTACACTATTGTCCACTAAACACTAATAAACCATGTTCTTaGCAGTATCCTGCCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: QFSTDTSIHNLHYCPLNTNKPCS*QYPARQ Trigger: TTGCCTGGCAGGATACTGCAAAGAACATGGTTTATT...AGTGTTTAGTGGACAATAGTGTAGGTTATGGATGGAGGTGTCGGTACTAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACTTTGTTTCTGGTTCATaGGTCATAGCTGACCATGTC | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYFVSGS*VIADHV Trigger: GACATGGTCAGCTATGACCAATGAACCAGAAACAAA...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACGACTTGGGTTGCAATTaGTTTCTGGTTCATTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYDLGCN*FLVHWS Trigger: TGACCAATGAACCAGAAACAAATTGCAACCCAAGTC...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCCTTTGGGACAGTGCTaGTTGTATTGTAGCCAATTA | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYPLGQC*LYCSQL Trigger: TAATTGGCTACAATACAACAAGCACTGTCCCAAAGG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCGTAACAAACCAGATCTaGGTTGTGATTCTTGGATTT | + |
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Preference number: 5 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTVTNQI*VVILGF Trigger: AAATCCAAGAATCACAACCAAGATCTGGTTTGTTAC...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCTTATGCTTAGTAGACTaGGGTTGCAATTTGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTLCLVD*GCNLFL Trigger: CAGAAACAAATTGCAACCCAAGTCTACTAAGCATAA...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TATTGTCCACTAAACACTCCCTACCTGTGTAAATTCCGTATCAAGGGTAAAACCCACAGCCATTCAAAATaGTGGAATACAATGTCTACA | + |
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Preference number: 5 (lower is better) Translates to: YCPLNTPYLCKFRIKGKTHSHSK*WNTMST Trigger: TGTAGACATTGTATTCCACAATTTTGAATGGCTGTG...GGTTTTACCCTTGATACGGAATTTACACAGGTAGGGAGTGTTTAGTGGACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACAGGAATCTTATTCAGTaGTTCTTCCATTCCTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYRNLIQ*FFHSWY Trigger: ATACCAGGAATGGAAGAACAACTGAATAAGATTCCT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACCTGCTACTCTTCACTTaGATCATTAGTAAAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYLLLFT*IISKER Trigger: TCTCTCTTTACTAATGATCAAAGTGAAGAGTAGCAG...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTGTCTAAATCCTTCAGAGTTCCAAACATTTCCACTGAACCCATACAAACTCTCATACTGCTaGATTTTCAGGTTGAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SKPCLNPSEFQTFPLNPYKLSYC*IFRLKG Trigger: ACCTTTCAACCTGAAAATCAAGCAGTATGAGAGTTT...GTATGGGTTCAGTGGAAATGTTTGGAACTCTGAAGGATTTAGACAAGGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS GCA 72 bp | CAAGTGGTGCCACGAGTGTCCAAACATACAGCACGATaGCAATCCAACTGGAAGAGATTTTCACCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: QVVPRVSKHTAR*QSNWKRFSPRQ Trigger: CTGTCTGGGTGAAAATCTCTTCCAGTTGGATTGGCATCGTGCTGTATGTTTGGACACTCGTGGCACCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS GCA 72 bp | GCCACCACTGGACTGACTGCCCTTCCTTTGGGACAGTaGTTGTTGTATTGTAGCCAATTATGCTTAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: ATTGLTALPLGQ*LLYCSQLCLVD Trigger: GTCTACTAAGCATAATTGGCTACAATACAACAAGCACTGTCCCAAAGGAAGGGCAGTCAGTCCAGTGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS CAA 90 bp | GAGCATGCCACCACTGGACTGACTGCCCTTCCTTTGGGACAGTGCTaGTTGTATTGTAGCCAATTATGCTTAGTAGACTTGGGTTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: EHATTGLTALPLGQC*LYCSQLCLVDLGCN Trigger: ATTGCAACCCAAGTCTACTAAGCATAATTGGCTACAATACAACAAGCACTGTCCCAAAGGAAGGGCAGTCAGTCCAGTGGTGGCATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS CAA 90 bp | CATGCCACCACTGGACTGACTGCCCTTCCTTTGGGACAGTGCTTGTaGTATTGTAGCCAATTATGCTTAGTAGACTTGGGTTGCAATTTG | + |
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Preference number: 6 (lower is better) Translates to: HATTGLTALPLGQCL*YCSQLCLVDLGCNL Trigger: CAAATTGCAACCCAAGTCTACTAAGCATAATTGGCTACAATACAACAAGCACTGTCCCAAAGGAAGGGCAGTCAGTCCAGTGGTGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS TCA 72 bp | CAACTGGAAGAGATTTTCACCCAGACAGCTGTCCACTaGCTTTTCATCTCACGAGAGGGTTCATACCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QLEEIFTQTAVH*LFISREGSYLY Trigger: GTACAGGTATGAACCCTCTCGTGAGATGAAAAGTCAGTGGACAGCTGTCTGGGTGAAAATCTCTTCCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS CCA 72 bp | TCTCACTCAGTCAAAATCACGATTTGTAAGAACAAGTaGTGCCACGAGTGTCCAAACATACAGCACGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SHSVKITICKNK*CHECPNIQHDA Trigger: GGCATCGTGCTGTATGTTTGGACACTCGTGGCACCACTTGTTCTTACAAATCGTGATTTTGACTGAGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS CAA 72 bp | ACTGGACTGACTGCCCTTCCTTTGGGACAGTGCTTGTaGTATTGTAGCCAATTATGCTTAGTAGACTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TGLTALPLGQCL*YCSQLCLVDLG Trigger: ACCCAAGTCTACTAAGCATAATTGGCTACAATACAACAAGCACTGTCCCAAAGGAAGGGCAGTCAGTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS TCA 72 bp | GAGGAGCATGTTGACACTGATGAACGCCTTGTTTTCTaGACAACTGGCTGGATGAGTGTAGTAGACAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: EEHVDTDERLVF*TTGWMSVVDKE Trigger: TTCTTTGTCTACTACACTCATCCAGCCAGTTGTTCAGAAAACAAGGCGTTCATCAGTGTCAACATGCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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| CDS GCA 72 bp | CACTCAGTCAAAATCACGATTTGTAAGAACAAGTGGTaGCACGAGTGTCCAAACATACAGCACGATGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: HSVKITICKNKW*HECPNIQHDAN Trigger: ATTGGCATCGTGCTGTATGTTTGGACACTCGTGGCACCACTTGTTCTTACAAATCGTGATTTTGACTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339697.5 |
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