Pregenerated sensors for SERHL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183569Ensembl transcript IDs: ENST00000327678.10, ENST00000335879.5, ENST00000407614.8, ENST00000416156.6, ENST00000447870.6, ENST00000477564.5, ENST00000534080.5
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTaGAGGAGAAGCTCCCCGCACTCCTCACTCAAGTGGCTATTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SQCCSLPVATFVVPL*RRSSPHSSLKWLLL Trigger: GAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR CCA 90 bp | GGCTCATCCATGCTGGAGCCCGTGTCAGTGCTTCGTTTCTTTTTATaGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGC | + |
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Preference number: 1 (lower is better) Translates to: GSSMLEPVSVLRFFL*LKNRLWWATHGGSR Trigger: GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACGAAGCACTGACACGGGCTCCAGCATGGATGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGAGTTCTCCATTTCATCTaGTTCCAGGAGAAAGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGVLHFI*FQEKER Trigger: CCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAAC...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR-3UTR GCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTGTCAATGCTGTTCTCTaGCTGTGGCCACCTTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: KISVDCSGFVSAVCPIWTVNAVL*LWPPSW Trigger: CCACGAAGGTGGCCACAGGCAGAGAACAGCATTGAC...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGACACTCAAGTGGCTATTaGTCTTCAGTAACCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGHSSGY*SSVTSA Trigger: TGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTG...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCGGGACTTCCACAAACTaGAACTGCTCTTTGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FFLWLKNRLWWATHGGSRGTSTN*NCSLRV Trigger: CACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCC...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACCTGTGGCCACCTTCGTaGTTCCTCTTTGCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHLWPPS*FLFAGE Trigger: TTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAG...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR-3UTR TCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAGGCAGGAGAATCGTTTaGATCCAGGAGACAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RFFLWLKNRLWWATHGGSGRRIV*IQETEV Trigger: AACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCC...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGGGACTTCCACAAACTaGAACTGCTCTTTGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHGTSTN*NCSLRV Trigger: CACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCC...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR TCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAACTGGAACTGCTCTTTaGGGGTGGATTTCATCGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RFFLWLKNRLWWATHGGSTGTAL*GWISSC Trigger: ACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGT...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCCACTCCTCACTCAAGTaGCTATTGCTCTTCAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: FFLWLKNRLWWATHGGSRHSSLK*LLLFSN Trigger: GTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTG...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR GCA 72 bp | GGAGAAGCTCCCCGCACTCCTCACTCAAGTGGCTATTaGTCTTCAGTAACCTCTGCAGCAGCTGCTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GEAPRTPHSSGY*SSVTSAAAASG Trigger: GCCTGAAGCAGCTGCTGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR CCA 72 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTaGTTCCTCTTTGCAGGAGAAGCTCCCCGCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: EVNAVLCLWPPS*FLFAGEAPRTP Trigger: AGGAGTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| 3UTR GCA 72 bp | AGGCAGGAGAATCGTTTGAATCCAGGAGACAGAGGTTaGAGTCAGCCGAGACTGGGCTCACTGGTTATGGAG | + |
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Preference number: 3 (lower is better) Translates to: RQENRLNPGDRG*SQPRLGSLVME Trigger: CTCCATAACCAGTGAGCCCAGTCTCGGCTGACTGCAACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR CCA 72 bp | ATGCTGGAGCCCGTGTCAGTGCTTCGTTTCTTTTTATaGCTTAAAAATCGTCTATGGTGGGCCACGCACGGT | + |
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Preference number: 3 (lower is better) Translates to: MLEPVSVLRFFL*LKNRLWWATHG Trigger: ACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACGAAGCACTGACACGGGCTCCAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CAA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTAGGCAGGAGAATCGTTaGAATCCAGGAGACAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: KISVDCSGFVSAVCPIWTRQENR*NPGDRG Trigger: ACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCCT...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CAA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTAACTGGAACTGCTCTTaGAGGGTGGATTTCATCGTG | + |
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Preference number: 3 (lower is better) Translates to: KISVDCSGFVSAVCPIWTNWNCS*RVDFIV Trigger: CACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTT...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACAACTGGAACTGCTCTTaGAGGGTGGATTTCATCGTG | + |
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Preference number: 3 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHNWNCS*RVDFIV Trigger: CACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTT...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| 3UTR-3UTR CAA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTTCACTCAAGTGGCTATaGCTCTTCAGTAACCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: KISVDCSGFVSAVCPIWTSLKWL*LFSNLC Trigger: GCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGA...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR TCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGAGTCGCAGGAGCAGAGTaGCGCCCGCAATTCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGVAGAE*RPQFRA Trigger: GGCCCGGAATTGCGGGCGTCACTCTGCTCCTGCGAC...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR TCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCGAGGCGGGCGGATCATaGGGTCAGGAGATGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSREAGGS*GQEMES Trigger: GCTCTCCATCTCCTGACCTCATGATCCGCCCGCCTC...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGAGCTGTTCTCTGCCTGTaGCCACCTTCGTGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGAVLCL*PPSWFL Trigger: GAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGC...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR TCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAGAGGCGGGCGGATCATaGGGTCAGGAGATGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSEAGGS*GQEMES Trigger: GCTCTCCATCTCCTGACCTCATGATCCGCCCGCCTC...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTGTCCCGCGAATGCGCTaGTGTCACTCCCTCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTVPRMR*CHSLTP Trigger: AGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGAC...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAGTCCCGCGAATGCGCTaGTGTCACTCCCTCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSVPRMR*CHSLTP Trigger: AGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGAC...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACATCTCCAAGCTGTCCTaGCCCGCCCTACCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHISKLS*PALPQA Trigger: TGCCTGGGGTAGGGCGGGGCAGGACAGCTTGGAGAT...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000477564.5 |
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| 3UTR CAA 72 bp | GAGGCAGGAGAATCGTTTGAATCCAGGAGACAGAGGTaGCAGTCAGCCGAGACTGGGCTCACTGGTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: EAGESFESRRQR*QSAETGLTGYG Trigger: TCCATAACCAGTGAGCCCAGTCTCGGCTGACTGCAACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACCTCTCGTCCCGCGAATaGGCTGCTGTCACTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHLSSRE*AAVTPS Trigger: TGAGGGAGTGACAGCAGCGCATTCGCGGGACGAGAG...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTCCAGGAGACAGAGGTTaGAGTCAGCCGAGACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTPGDRG*SQPRLG Trigger: GCCCAGTCTCGGCTGACTGCAACCTCTGTCTCCTGG...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCTTCGTGGTTCCTCTTTaGAGGAGAAGCTCCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRFVVPL*RRSSPH Trigger: GTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGAA...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCGTCAATGCTGTTCTCTaGCTGTGGCCACCTTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRVNAVL*LWPPSW Trigger: CCACGAAGGTGGCCACAGGCAGAGAACAGCATTGAC...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGAGGGACTTCCACAAACTaGAACTGCTCTTTGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGGTSTN*NCSLRV Trigger: CACCCTCAAAGAGCAGTTCCAGTTTGTGGAAGTCCC...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR CCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAGCTGTTCTCTGCCTGTaGCCACCTTCGTGGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSAVLCL*PPSWFL Trigger: GAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGC...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCTGGGCTCACTGGTTATaGAGCCTTACCTGGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRWAHWL*SLTWAC Trigger: GCATGCCCAGGTAAGGCTCCATAACCAGTGAGCCCA...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCCATGAGGTCAGGAGATaGAGAGCAGCCTGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRHEVRR*RAAWPT Trigger: TGTTGGCCAGGCTGCTCTCCATCTCCTGACCTCATG...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGAACTGGAACTGCTCTTTaGGGGTGGATTTCATCGTGT | + |
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Preference number: 4 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGTGTAL*GWISSC Trigger: ACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGT...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR GCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGATGGAGCCCGTGTCAGTaGTTCGTTTCTTTTTATGGC | + |
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Preference number: 4 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGWSPCQ*FVSFYG Trigger: GCCATAAAAAGAAACGAAGCACTGACACGGGCTCCA...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR CCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTTGGGCTCACTGGTTATaGAGCCTTACCTGGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTWAHWL*SLTWAC Trigger: GCATGCCCAGGTAAGGCTCCATAACCAGTGAGCCCA...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACCGAGACTGGGCTCACTaGTTATGGAGCCTTACCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHRDWAH*LWSLTW Trigger: CCAGGTAAGGCTCCATAACCAGTGAGCCCAGTCTCG...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTAGATGGAGAGCAGCCTaGCCAACATGGCGAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTRWRAA*PTWRNL Trigger: GAGGTTTCGCCATGTTGGCCAGGCTGCTCTCCATCT...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACAGATGGAGAGCAGCCTaGCCAACATGGCGAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHRWRAA*PTWRNL Trigger: GAGGTTTCGCCATGTTGGCCAGGCTGCTCTCCATCT...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACCATGAGGTCAGGAGATaGAGAGCAGCCTGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHHEVRR*RAAWPT Trigger: TGTTGGCCAGGCTGCTCTCCATCTCCTGACCTCATG...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCATCCGTGGACTGCTCTaGCTTTGTCTCTGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRIRGLL*LCLCSV Trigger: CACACTGCAGAGACAAAGCCAGAGCAGTCCACGGAT...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGACACTCCTCACTCAAGTaGCTATTGCTCTTCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGHSSLK*LLLFSN Trigger: GTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTG...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR CCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTCTGTGGCCACCTTCGTaGTTCCTCTTTGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTLWPPS*FLFAGE Trigger: TTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAG...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAAAAAATCGTCTATGGTaGGCCACGCACGGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSKNRLW*ATHGGS Trigger: TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTT...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAATCCGTGGACTGCTCTaGCTTTGTCTCTGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSIRGLL*LCLCSV Trigger: CACACTGCAGAGACAAAGCCAGAGCAGTCCACGGAT...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTGGCAGGAGAATCGTTTaGATCCAGGAGACAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTGRRIV*IQETEV Trigger: AACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCC...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGGCAGGAGAATCGTTTaGATCCAGGAGACAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHGRRIV*IQETEV Trigger: AACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCC...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCTGCCCTATTTGGACTTaGCTTGAACGTGAATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRCPIWT*LERECS Trigger: GCTGCATTCACGTTCAAGTCAAGTCCAAATAGGGCA...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCTGGAGCCCGTGTCAGTaGTTCGTTTCTTTTTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRWSPCQ*FVSFYG Trigger: GCCATAAAAAGAAACGAAGCACTGACACGGGCTCCA...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAGTTCTCCATTTCATCTaGTTCCAGGAGAAAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSVLHFI*FQEKER Trigger: CCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAAC...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGTTCTCCATTTCATCTaGTTCCAGGAGAAAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHVLHFI*FQEKER Trigger: CCGCTCTTTCTCCTGGAATCAGATGAAATGGAGAAC...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTACTGGAACTGCTCTTTaGGGGTGGATTTCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KISVDCSGFVSAVCPIWTTGTAL*GWISSC Trigger: ACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGT...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACTGCCCTATTTGGACTTaGCTTGAACGTGAATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHCPIWT*LERECS Trigger: GCTGCATTCACGTTCAAGTCAAGTCCAAATAGGGCA...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCCACTCAAGTGGCTATTaGTCTTCAGTAACCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFLWLKNRLWWATHGGSRHSSGY*SSVTSA Trigger: TGCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTG...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR GCA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCAAAAATATCCGTGGACTaGTCTGGCTTTGTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RFFLWLKNRLWWATHGGSKISVD*SGFVSA Trigger: TGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CCA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACCACTCCTCACTCAAGTaGCTATTGCTCTTCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHHSSLK*LLLFSN Trigger: GTTACTGAAGAGCAATAGCCACTTGAGTGAGGAGTG...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS GCA 90 bp | TCTCTGTTCAGAACCAGACCTGTGGCCACCTTCGTGGTTCCTCTTTaGAGGAGAAGCTCCCCGCACTCCTCACTCAAGTGGCTATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLFRTRPVATFVVPL*RRSSPHSSLKWLLL Trigger: GAGCAATAGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCTGAACAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000327678.10 ENST00000335879.5 |
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| CDS-3UTR CAA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGACTTCGTGGTTCCTCTTaGCAGGAGAAGCTCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGLRGSS*QEKLPA Trigger: TGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGAAG...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR CAA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCTCCAGGAGACAGAGGTaGCAGTCAGCCGAGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FFLWLKNRLWWATHGGSRSRRQR*QSAETG Trigger: CCCAGTCTCGGCTGACTGCAACCTCTGTCTCCTGGA...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | AAAATATCCGTGGACTGCTCTGGCTTTGTCTCTGCAGTGTGCCCTATTTGGACTTCCAGGAGACAGAGGTaGCAGTCAGCCGAGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KISVDCSGFVSAVCPIWTSRRQR*QSAETG Trigger: CCCAGTCTCGGCTGACTGCAACCTCTGTCTCCTGGA...AGTCCAAATAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCACGGATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACTGGACTGCTCTGGCTTaGTCTCTGCAGTGTGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHWTALA*SLQCAL Trigger: TAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCA...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCATGGACTGCTCTGGCTTaGTCTCTGCAGTGTGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: RFFLWLKNRLWWATHGGSWTALA*SLQCAL Trigger: TAGGGCACACTGCAGAGACAAAGCCAGAGCAGTCCA...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | GAAGTCAATGCTGTTCTCTGCCTGTGGCCACCTTCGTGGTTCCTCTTTGCAGGAAACGTAATAAAAGTCTaGCGGGAGAAGAGGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: EVNAVLCLWPPSWFLFAGNVIKV*REKRDE Trigger: CTCATCCCTCTTCTCCCGCAAGACTTTTATTACGTT...TCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGCAGAGAACAGCATTGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416156.6 |
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| CDS-3UTR CAA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCAGGCAGGAGAATCGTTaGAATCCAGGAGACAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLWLKNRLWWATHGGSRRQENR*NPGDRG Trigger: ACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCCT...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACGCAACTGGAACTGCTCTTaGAGGGTGGATTTCATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFLWLKNRLWWATHGGSRNWNCS*RVDFIV Trigger: CACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTT...GCGTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACAGGCAGGAGAATCGTTaGAATCCAGGAGACAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHRQENR*NPGDRG Trigger: ACCTCTGTCTCCTGGATTCAAACGATTCTCCTGCCT...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACTCACTCAAGTGGCTATaGCTCTTCAGTAACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHSLKWL*LFSNLC Trigger: GCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGA...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | CGTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCATCACTCAAGTGGCTATaGCTCTTCAGTAACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFFLWLKNRLWWATHGGSSLKWL*LFSNLC Trigger: GCAGAGGTTACTGAAGAGCAATAGCCACTTGAGTGA...TGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS-3UTR CAA 90 bp | GTTTCTTTTTATGGCTTAAAAATCGTCTATGGTGGGCCACGCACGGTGGCTCACAACGTAATAAAAGTCTaGCGGGAGAAGAGGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSFYGLKIVYGGPRTVAHNVIKV*REKRDE Trigger: CTCATCCCTCTTCTCCCGCAAGACTTTTATTACGTT...GTGAGCCACCGTGCGTGGCCCACCATAGACGATTTTTAAGCCATAAAAAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000416156.6 ENST00000477564.5 |
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| CDS TCA 72 bp | TTGGAACCCAGCAGGGCGCCAACCCCCGGGCAGTCCTaGTGGCCGCCCCCACGTCCGCGCGGGACCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LEPSRAPTPGQS*WPPPRPRGTRP Trigger: GGGTCTGGTCCCGCGCGGACGTGGGGGCGGCCATCAGGACTGCCCGGGGGTTGGCGCCCTGCTGGGTTCCAA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000447870.6 |
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| CDS GCA 72 bp | AGAACCAGACCTGTGGCCACCTTCGTGGTTCCTCTTTaGAGGAGAAGCTCTGAGATCAGACCTGGTGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RTRPVATFVVPL*RRSSEIRPGAA Trigger: CGCCGCACCAGGTCTGATCTCAGAGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407614.8 |
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| CDS CCA 72 bp | GGTCTCTGTTCAGAACCAGACCTGTGGCCACCTTCGTaGTTCCTCTTTGCAGGAGAAGCTCCCCGCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLCSEPDLWPPS*FLFAGEAPRTP Trigger: AGGAGTGCGGGGAGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCTGAACAGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000327678.10 ENST00000335879.5 |
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| CDS CCA 72 bp | GGTCTCTGTTCAGAACCAGACCTGTGGCCACCTTCGTaGTTCCTCTTTGCAGGAGAAGCTCTGAGATCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLCSEPDLWPPS*FLFAGEALRSD Trigger: GTCTGATCTCAGAGCTTCTCCTGCAAAGAGGAACCACGAAGGTGGCCACAGGTCTGGTTCTGAACAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407614.8 |
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| CDS CCA 72 bp | TCTCTGTTCAGAACCAGACCTGTAATCCTACCATTTTaGGAGGTCGAGTCAGTAGGATCGCTTGAGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLFRTRPVILPF*EVESVGSLEFR Trigger: CCTGAACTCAAGCGATCCTACTGACTCGACCTCCCAAAATGGTAGGATTACAGGTCTGGTTCTGAACAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534080.5 |
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