RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERGEF (Homo sapiens)

Ensembl gene IDs: ENSG00000129158

Ensembl transcript IDs: ENST00000265965.10, ENST00000524589.5, ENST00000524716.5, ENST00000525168.1, ENST00000525422.5, ENST00000525920.5, ENST00000527494.5, ENST00000528200.5, ENST00000528369.5, ENST00000529440.5, ENST00000529728.5, ENST00000530613.5, ENST00000530925.5, ENST00000530951.2, ENST00000531299.5, ENST00000531926.5, ENST00000532212.5, ENST00000532265.5, ENST00000532389.5, ENST00000532546.5, ENST00000533241.1, ENST00000533328.5

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTaGCAGCTGGCAGAGGGCCAAGGAGTGGCCAGCCCCACAGCCCAC +
Preference number: 1 (lower is better)
Translates to: GKVGDLGVLDQCRVS*QLAEGQGVASPTAH
Trigger: GTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR GCA 90 bp CCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTaGACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCG +
Preference number: 1 (lower is better)
Translates to: PAPQPTRSPDDDSRA*TGFGAQTLASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCTCCAG +
Preference number: 1 (lower is better)
Translates to: PALGPRRWLQCHLRT*HAHSSPKSNTLHLQ
Trigger: CTGGAGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532546.5
3UTR TCA 90 bp CTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGTaGCCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGC +
Preference number: 1 (lower is better)
Translates to: LSEIQCPRWHLGKGR*PWGPGPMQGELAAG
Trigger: GCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR TCA 90 bp GAAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCACTGGAACACGATGCCACTCGCTCC +
Preference number: 1 (lower is better)
Translates to: EKQWKSLPRAQPSST*CQTSPPLEHDATRS
Trigger: GGAGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTA +
Preference number: 1 (lower is better)
Translates to: PALGPRRWLQCHLRT*HAHSSPKSNTLHQL
Trigger: TAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
3UTR TCA 90 bp GAAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCACTGGAACACGATGCCACTCGCTGT +
Preference number: 1 (lower is better)
Translates to: EKQWKSLPRAQPSST*CQTSPPLEHDATRC
Trigger: ACAGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
3UTR CCA 90 bp CTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTaGGGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: LFVHGFLRFSVLDGI*GKVGDLGVLDQCRV
Trigger: CACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR GCA 90 bp GTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCC +
Preference number: 1 (lower is better)
Translates to: VTLLGSFAVKNNGRV*PGHNRRPHDAKPVP
Trigger: GGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
3UTR GCA 90 bp CCTGTGATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTaGTGGGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTTGC +
Preference number: 1 (lower is better)
Translates to: PVILLTLLGLQKSFS*WGNSTSSLWPRPSC
Trigger: GCAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGATCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR CCA 90 bp GTGATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTGCTaGGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTTGCCCA +
Preference number: 1 (lower is better)
Translates to: VILLTLLGLQKSFSC*GNSTSSLWPRPSCP
Trigger: TGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR TCA 90 bp TTATGGAGCTCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCAAAGGAGTTGGATCCACATGATAGA +
Preference number: 1 (lower is better)
Translates to: LWSSMAWGTTHLRGP*GTPNWPKELDPHDR
Trigger: TCTATCATGTGGATCCAACTCCTTTGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR-3UTR GCA 90 bp CCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: PAPQPTRSPDDDSRACTGCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...GCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR GCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGGGGGTCCTGGACCAATaGAGGGTGAGCTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGGVLDQ*RVSWQL
Trigger: CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCC...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR GCA 90 bp CCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCCCCACTGGAACACGATaGCACTCGCTCCTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: PAPQPTRSPDDDSRACTGPTGTR*HSLLSP
Trigger: AGGAGAGAGGAGCGAGTGGCATCGTGTTCCAGTGGG...GCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR-3UTR GCA 90 bp CCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGGGCCAAGGTCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: PWGPGPMQGELAAGRGPRSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...CCTTGGCCCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CCA 90 bp GTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGTTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 2 (lower is better)
Translates to: VGDLGVLDQCRVSWQLAELGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...CTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CCA 90 bp TGGGGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: WGKVGDLGVLDQCRVSWQSLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...CTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR CAA 90 bp AGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCAT +
Preference number: 2 (lower is better)
Translates to: SPQGVLTMTAEPAPA*GPRRWLQCHLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CCA 90 bp AAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCATTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 2 (lower is better)
Translates to: KVGDLGVLDQCRVSWQLALGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...TGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CCA 90 bp CCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: PDVGFSAISAHAMLIPAPSLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...TGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR TCA 90 bp GGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGGGTCTCCTCCATCTGTaGCAACTGCAGAGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: GHNRRPHDAKPVPHWNTMGLLHL*QLQSGP
Trigger: GGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACC...CATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533328.5
3UTR-3UTR GCA 90 bp CCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGTCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: PHSPQGVLTMTAEPAPALSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...CAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR GCA 90 bp GCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: AQTLASVPSPHMPCSFQPCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...GGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR GCA 90 bp GGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 2 (lower is better)
Translates to: GRVCPGHNRRPHDAKPVPNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...GGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
3UTR-3UTR TCA 90 bp ACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: TMEESAQGTTVVHMMPNQGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...CTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533328.5
3UTR-3UTR TCA 90 bp TGGGGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGTCCGATCATCAGCACTaGAGTCTCTCACAGGATTCA +
Preference number: 2 (lower is better)
Translates to: WGKVGDLGVLDQCRVSWQSDHQH*SLSQDS
Trigger: TGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGA...CTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532546.5
3UTR-3UTR TCA 90 bp CTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTGACTCACGAAGCACCTaGGCCTCAGCTGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: LCPWLSEIQCPRWHLGKGDSRST*ASAATA
Trigger: GGCTGTGGCAGCTGAGGCTCAGGTGCTTCGTGAGTC...ACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR-3UTR GCA 90 bp CCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 2 (lower is better)
Translates to: PAPQPTRSPDDDSRACTGIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...GCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000532546.5
3UTR-3UTR GCA 90 bp CCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGGGCCAAGGATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 2 (lower is better)
Translates to: PWGPGPMQGELAAGRGPRIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...CCTTGGCCCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000532546.5
3UTR-3UTR TCA 90 bp TTCTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTGGACCAATGCAGGGTaGGCTGGCAGCTGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: FSITVPHFWTSQIGFGLKWTNAG*AGSWQR
Trigger: CCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCA...CTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CCA 90 bp TCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCAGAGGGCCAAGGAGTaGCCAGCCCCACAGCCCACA +
Preference number: 2 (lower is better)
Translates to: SITVPHFWTSQIGFGLKFQRAKE*PAPQPT
Trigger: TGTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTG...AAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CCA 90 bp GTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 2 (lower is better)
Translates to: VGDLGVLDQCRVSWQLAETCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...CTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR-3UTR CCA 90 bp ACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 2 (lower is better)
Translates to: TMEESAQGTTVVHMMPNQRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...CTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533328.5
3UTR-3UTR GCA 90 bp TGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGTCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: CPWLSEIQCPRWHLGKGRSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...CCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR GCA 90 bp AAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: KNNGRVCPGHNRRPHDAKRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...TTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
3UTR-3UTR CCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAACAGTCCCCCATTTCTaGACCAGTCAGATTGGCTTT +
Preference number: 2 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRTVPHF*TSQIGF
Trigger: AAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGT...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CCA 90 bp GGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGCCACATCAGCAAAACTaGGATAATAATACTTACCTT +
Preference number: 2 (lower is better)
Translates to: GQPHSPQGVLTMTAEPAPPHQQN*DNNTYL
Trigger: AAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG...CGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532546.5
3UTR CAA 90 bp TCCTGTGATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTTG +
Preference number: 2 (lower is better)
Translates to: SCDPPDTPGFTEVIQ*LGQQHIFLMAEAKL
Trigger: CAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGATCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR-3UTR TCA 90 bp TGGATGGGACAGCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATATCCTCTCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: WMGQPKRDLQGVKYGISSQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...AGAGGATATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTGTCCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533328.5
3UTR-3UTR GCA 90 bp AGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCTGCCGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RPVTLLGSFAVKNNGRVCRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...GCAGACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
3UTR-3UTR CCA 90 bp TCTTTGTTCAGGCCACAAACAAAGAGGTCTCCTCCATCTGTGACAACTGCAGAGAGCACATCTTCCTTATaGCCGAGGCCAAGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: SLFRPQTKRSPPSVTTAESTSSL*PRPSCP
Trigger: TGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCT...CTCTGCAGTTGTCACAGATGGAGGAGACCTCTTTGTTTGTGGCCTGAACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR-3UTR CCA 90 bp TTTATGGAGCTCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATGAGGAACGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 2 (lower is better)
Translates to: FMELNGLGNHTSSRSMRNAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...GTTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR-3UTR TCA 90 bp CTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGTGCCAAATTATGCTCTaGGCCACAAGAGACCTACTG +
Preference number: 2 (lower is better)
Translates to: LFVHGFLRFSVLDGIWGKCQIML*ATRDLL
Trigger: CAGTAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...CTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525422.5
3UTR-3UTR GCA 90 bp CTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCCAGAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCAT +
Preference number: 2 (lower is better)
Translates to: LDQSDWLWVEVSDCLSFQRRWLQ*HLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCT...CTGGAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CCA 90 bp GCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTGGTTCCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 2 (lower is better)
Translates to: ARTHIALEFSRPVTLLGSKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...GGAACCAAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
3UTR-3UTR CCA 90 bp GAGCCAGCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 2 (lower is better)
Translates to: EPARTHIALEFSRPVTLLKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...AAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGCTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
3UTR-3UTR CCA 90 bp AGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SPPFLDQSDWLWVEVSDCCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR-3UTR CCA 90 bp GCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTGGTTCCTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: ARTHIALEFSRPVTLLGSCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...GGAACCAAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
3UTR-3UTR TCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAATCAAAAATGGCTCCATaGCACATGAACACTGTGATC +
Preference number: 2 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKSKMAP*HMNTVI
Trigger: GATCACAGTGTTCATGTGTCATGGAGCCATTTTTGA...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
3UTR-3UTR GCA 90 bp GAGCCAGCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 2 (lower is better)
Translates to: EPARTHIALEFSRPVTLLIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...AAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGCTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR-3UTR CCA 90 bp TTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCCCAGTCAGATTGGCTTTaGGTTGAAGTTTCTGATTGT +
Preference number: 2 (lower is better)
Translates to: FWTSQIGFGLKFLIVFPSQSDWL*VEVSDC
Trigger: ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTG...GGAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAACCACATCAGCAAAACTaGGATAATAATACTTACCTT +
Preference number: 2 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKPHQQN*DNNTYL
Trigger: AAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
3UTR CAA 90 bp CAGCAAAACTGGGATAATAATACTTACCTTGCAGAGATACAATTATaGCCAAATTATGCTCTGAGCCACAAGAGACCTTGCTATTACTCC +
Preference number: 2 (lower is better)
Translates to: QQNWDNNTYLAEIQL*PNYALSHKRPCYYS
Trigger: GGAGTAATAGCAAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCAGTTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
3UTR-3UTR GCA 90 bp CAGCAGCAATACAAACAACCTTCTCTTTATGGAGCTGTGAGCATAATCGTAAAATCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 2 (lower is better)
Translates to: QQQYKQPSLYGAVSIIVKSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...TTTTACGATTATGCTCACAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533328.5
3UTR CCA 72 bp GGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTaGCAGCTGGCAGAGGGCCAAGGAGTGGCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: GDLGVLDQCRVS*QLAEGQGVASP
Trigger: GGGGCTGGCCACTCCTTGGCCCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR GCA 72 bp CCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCATGCTCATTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: PAPALGPRRWLQ*HLRTCHAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CAA 90 bp CCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: PDVGFSAISAHAMLIPAPEPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...TGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR GCA 72 bp CAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTaGACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: QPTRSPDDDSRA*TGFGAQTLASV
Trigger: CACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CAA 90 bp AAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCATTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 3 (lower is better)
Translates to: KVGDLGVLDQCRVSWQLAFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...TGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR-3UTR CAA 90 bp TGGGGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 3 (lower is better)
Translates to: WGKVGDLGVLDQCRVSWQFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...CTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR TCA 72 bp TGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCACTGGAACACGATGCC +
Preference number: 3 (lower is better)
Translates to: WKSLPRAQPSST*CQTSPPLEHDA
Trigger: GGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
3UTR GCA 72 bp GGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCCAAGAGTAACACACTC +
Preference number: 3 (lower is better)
Translates to: GPRRWLQCHLRT*HAHSSPKSNTL
Trigger: GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR CCA 72 bp AACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCTCCTCTCTCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: NRRPHDAKPVPH*NTMPLAPLSFL
Trigger: GAGGAAGGAGAGAGGAGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR TCA 72 bp ATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGTaGCCTTGGGGTCCTGGACCAATGCAGGGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: IQCPRWHLGKGR*PWGPGPMQGEL
Trigger: CAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAGATGCCATCGAGGACACTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR CCA 72 bp AACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCTGTAGCAGCTACTGCA +
Preference number: 3 (lower is better)
Translates to: NRRPHDAKPVPH*NTMPLAVAATA
Trigger: TGCAGTAGCTGCTACAGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
3UTR-3UTR CAA 90 bp TCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: SITVPHFWTSQIGFGLKFEPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...AAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CAA 90 bp ATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 3 (lower is better)
Translates to: ITVPHFWTSQIGFGLKFLFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...CAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
3UTR-3UTR CAA 90 bp ATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTGCTGGGGCAACAGCATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACC +
Preference number: 3 (lower is better)
Translates to: ILLTLLGLQKSFSCWGNSMAEAK*PIAICT
Trigger: GGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCAT...GCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR-3UTR CAA 90 bp CCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGCAGAGATACAATTATaGCCAAATTATGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: PHSPQGVLTMTAEPAPALAEIQL*PNYALS
Trigger: GCTCAGAGCATAATTTGGCAATAATTGTATCTCTGC...CAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
3UTR TCA 72 bp TCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCAAAGGAGTTGGATCCA +
Preference number: 3 (lower is better)
Translates to: SMAWGTTHLRGP*GTPNWPKELDP
Trigger: TGGATCCAACTCCTTTGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR GCA 72 bp CTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTaGTGGGGCAACAGCACATCTTCCTTATGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: LLTLLGLQKSFS*WGNSTSSLWPR
Trigger: CCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR GCA 72 bp TGGGGCACAGGAAGGAAAGCAGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCCCAAACATACACCTCT +
Preference number: 3 (lower is better)
Translates to: WGTGRKAASLAS*PCLLLPQTYTS
Trigger: AGAGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCTGCTTTCCTTCCTGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR CCA 72 bp CTGACACTCCTGGGTTTACAGAAGTCATTCAGTTGCTaGGGCAACAGCACATCTTCCTTATGGCCGAGGCCA +
Preference number: 3 (lower is better)
Translates to: LTLLGLQKSFSC*GNSTSSLWPRP
Trigger: TGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR GCA 72 bp TGGAACACGATGCCACTCGCTGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATACAAACAACCTTCTCT +
Preference number: 3 (lower is better)
Translates to: WNTMPLAVAATA*LSPAAIQTTFS
Trigger: AGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGCATCGTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
3UTR GCA 72 bp ACAGGAAGGAAAGCAGCCTCATTAGCCAGTTGCCCATaGTTGTTGCTTCCCCAAACATACACCTCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: TGRKAASLASCP*LLLPQTYTSPA
Trigger: TGCAGGAGAGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCTGCTTTCCTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR GCA 72 bp CTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGTCCACATGATGCCAAA +
Preference number: 3 (lower is better)
Translates to: LGSFAVKNNGRV*PGHNRRPHDAK
Trigger: TTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
3UTR-3UTR CAA 90 bp ACCTGTTGGATGGGACAGCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATAACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 3 (lower is better)
Translates to: TCWMGQPKRDLQGVKYGITEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...TATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTGTCCCATCCAACAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524716.5
3UTR TCA 72 bp GTAACACACTCCACCAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTCTGAGCAACCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: VTHSTNYCQIML*ATRDLSEQPGV
Trigger: CACACCTGGTTGCTCAGACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGGTGGAGTGTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR TCA 72 bp GAGCAACCAGGTGTGTCCATCCACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAACAATGTGCTTCTATTT +
Preference number: 3 (lower is better)
Translates to: EQPGVSIHSRWQ*PFHSGNNVLLF
Trigger: AAATAGAAGCACATTGTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTGGATGGACACACCTGGTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR CCA 72 bp ACATACACCTCTCCTGCATCTGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACACACATTGCTTTAGAA +
Preference number: 3 (lower is better)
Translates to: TYTSPASVNEAE*SEPARTHIALE
Trigger: TTCTAAAGCAATGTGTGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAACAGATGCAGGAGAGGTGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR TCA 72 bp GTAACACACTCCACCAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTACTGGAAGTTCAGAGAATG +
Preference number: 3 (lower is better)
Translates to: VTHSTNYCQIML*ATRDLLEVQRM
Trigger: CATTCTCTGAACTTCCAGTAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGGTGGAGTGTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR GCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGTGGGCTCGCGCTCCATaGGAGGACGCTCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGWARAP*EDAPPA
Trigger: CGCCGGCGGAGCGTCCTCGCATGGAGCGCGAGCCCA...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTGGACCAATGCAGGGTaGGCTGGCAGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QPHSPQGVLTMTAEPAPAWTNAG*AGSWQR
Trigger: CCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCA...AGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp AGAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACTGGACCAATGCAGGGTaGGCTGGCAGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RACTGFGAQTLASVPSPHWTNAG*AGSWQR
Trigger: CCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCA...GTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QPHSPQGVLTMTAEPAPASLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...AGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
3UTR CAA 72 bp GGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: GVLTMTAEPAPA*GPRRWLQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp AGAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACGGTCTCCTCCATCTGTaGCAACTGCAGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RACTGFGAQTLASVPSPHGLLHL*QLQSGP
Trigger: GGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACC...GTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTCTGGGGAAAGGTAGGTaGCCTTGGGGTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: QPHSPQGVLTMTAEPAPALGKGR*PWGPGP
Trigger: TGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAG...AGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCAGGGGTCCTGGACCAATaGAGGGTGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CTGFGAQTLASVPSPHMPGVLDQ*RVSWQL
Trigger: CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCC...TGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGGGGTCCTGGACCAATaGAGGGTGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: APALGPRRWLQCHLRTCHGVLDQ*RVSWQL
Trigger: CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCC...ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp TGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCAAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CTGFGAQTLASVPSPHMPSLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...TGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp GCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAGAGGGCCAAGGAGTaGCCAGCCCCACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: AQTLASVPSPHMPCSFQPQRAKE*PAPQPT
Trigger: TGTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTG...GGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp GTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGCTGGGGAAAGGTAGGTaGCCTTGGGGTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: VGDLGVLDQCRVSWQLAELGKGR*PWGPGP
Trigger: TGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAG...CTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EPAPALGPRRWLQCHLRTSICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...TGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACGGCCTCCGAGGCGCTaGGCTCGCGCTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: LQCHLRTCHAHSSPKSNTRPPRR*ARAPCE
Trigger: CTCGCATGGAGCGCGAGCCCAGCGCCTCGGAGGCCG...TGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGTTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: PQPTRSPDDDSRACTGFGLGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...CCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp GGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGGTCTCCTCCATCTGTaGCAACTGCAGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GKVGDLGVLDQCRVSWQLGLLHL*QLQSGP
Trigger: GGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACC...CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp GCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACAGGTCTCCTCCATCTGTaGCAACTGCAGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AQGTTVVHMMPNQSPTGTGLLHL*QLQSGP
Trigger: GGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACC...TGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR TCA 90 bp CGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RLWGPDVGFSAISAHAMLQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...GAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGCGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQPTRSPDDDSRACTGFGRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...CCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGGGCCAAGGGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PWGPGPMQGELAAGRGPRASLAS*PCLLLP
Trigger: GGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGC...CCTTGGCCCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CTGFGAQTLASVPSPHMPCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...TGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GCAGAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: AEPAPALGPRRWLQCHLRRRWLQ*HLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCT...GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: PAPALGPRRWLQCHLRTCKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...GCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGCAGAGGGCCAAGGAGTaGCCAGCCCCACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: TLASVPSPHMPCSFQPQEQRAKE*PAPQPT
Trigger: TGTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTG...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp TGGGGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: WGKVGDLGVLDQCRVSWQGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...CTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPAQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp AAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCATCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVGDLGVLDQCRVSWQLASICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...TGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTGCGGAGACGAAGGCATaGTGTTCGGTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PALGPRRWLQCHLRTCHAAETKA*CSVVLN
Trigger: GTTCAAGACCACCGAACAGCATGCCTTCGTCTCCGC...AGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR GCA 90 bp CCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCGCTCCAGTTAAGCAATaGGGAGACGAAGGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PAPALGPRRWLQCHLRTCAPVKQ*GDEGML
Trigger: CAGCATGCCTTCGTCTCCGCATTGCTTAACTGGAGC...GCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR GCA 90 bp ACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TGFGAQTLASVPSPHMPCSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...GCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGTCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PQPTRSPDDDSRACTGFGSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...CCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp AGAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACTGGAGCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: RACTGFGAQTLASVPSPHWSSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCA...GTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: VGDLGVLDQCRVSWQLAEKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...CTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCAGAGGGCCAAGGAGTaGCCAGCCCCACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QCHLRTCHAHSSPKSNTLQRAKE*PAPQPT
Trigger: TGTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTG...GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTGTCCTCGATGGCATCTaGGGAAAGGTAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: QPHSPQGVLTMTAEPAPAVLDGI*GKVGDL
Trigger: AAGGTCACCTACCTTTCCCCAGATGCCATCGAGGAC...AGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp CAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCTGGACCAATGCAGGGTaGGCTGGCAGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QCHLRTCHAHSSPKSNTLWTNAG*AGSWQR
Trigger: CCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCA...GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp ACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACCTGGGGAAAGGTAGGTaGCCTTGGGGTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: TTVVHMMPNQSPTGTRCHLGKGR*PWGPGP
Trigger: TGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAG...GTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: PALGPRRWLQCHLRTCHANNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...AGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp AGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLHRLWGPDVGFSAISAHASLAS*PCLLLP
Trigger: GGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGC...ATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: APALGPRRWLQCHLRTCHRRWLQ*HLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCT...ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GCCAAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: AKEWPAPQPTRSPDDDSRRRWLQ*HLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCT...TCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACGGGGTCCTGGACCAATaGAGGGTGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WLQCHLRTCHAHSSPKSNGVLDQ*RVSWQL
Trigger: CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCC...GTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTCGGCCTCCGAGGCGCTaGGCTCGCGCTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: LYHSPPFLDQSDWLWVEVRPPRR*ARAPCE
Trigger: CTCGCATGGAGCGCGAGCCCAGCGCCTCGGAGGCCG...AACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGTGGAGCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGWSSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCA...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCTTTATGGAGCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: PAPALGPRRWLQCHLRTCLYGAQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG...GCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPAKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTTTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: RWLQCHLRTCHAHSSPKSLGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...ACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp TGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CHLRTCHAHSSPKSNTLHSLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...GTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp GCCAAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGTCCTCGATGGCATCTaGGGAAAGGTAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: AKEWPAPQPTRSPDDDSRVLDGI*GKVGDL
Trigger: AAGGTCACCTACCTTTCCCCAGATGCCATCGAGGAC...TCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGGTCCTCGATGGCATCTaGGGAAAGGTAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGVLDGI*GKVGDL
Trigger: AAGGTCACCTACCTTTCCCCAGATGCCATCGAGGAC...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp TGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACGGTCTCCTCCATCTGTaGCAACTGCAGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CHLRTCHAHSSPKSNTLHGLLHL*QLQSGP
Trigger: GGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACC...GTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp ACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTVVHMMPNQSPTGTRCHGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...GTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR TCA 90 bp TGGAACACGATGCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: WNTMPLAVAATACLSPAAGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...TGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGCATCGTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR TCA 90 bp CCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGTTGCCAGTTTCTGTCTaGGCAACCAGGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PQPTRSPDDDSRACTGFGLPVSV*ATRCVH
Trigger: ATGGACACACCTGGTTGCTCAGACAGAAACTGGCAA...CCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR TCA 90 bp TTCTGGGGCACAGGAAGGAAAGCAGCCTCATTAGCCAGTTGCCCATGCTTGTTGGACTCACGAAGCACCTaGGCCTCAGCTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: FWGTGRKAASLASCPCLLDSRST*ASAATA
Trigger: GGCTGTGGCAGCTGAGGCTCAGGTGCTTCGTGAGTC...CAACAAGCATGGGCAACTGGCTAATGAGGCTGCTTTCCTTCCTGTGCCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR GCA 90 bp CTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTTCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LWGPDVGFSAISAHAMLISICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...AATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGACGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: AQTLASVPSPHMPCSFQPNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...GGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCATCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PDVGFSAISAHAMLIPAPSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...TGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCCCACTGGAACACGATaGCACTCGCTCCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FGAQTLASVPSPHMPCSFPTGTR*HSLLSP
Trigger: AGGAGAGAGGAGCGAGTGGCATCGTGTTCCAGTGGG...GAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp GCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: ACTGFGAQTLASVPSPHMAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...CATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACAACCTTCTCTTTATaGAGCTCAATGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EWPAPQPTRSPDDDSRACTTFSL*SSMAWG
Trigger: TCCCCAGGCCATTGAGCTCCATAAAGAGAAGGTTGT...GCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGCACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGHSRWQ*PFHSGN
Trigger: GTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTG...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp CGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCTGCCAAATTATGCTCTaGGCCACAAGAGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: RLWGPDVGFSAISAHAMLCQIML*ATRDLA
Trigger: AGCAAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...GAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR GCA 90 bp AAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCCAGAAGTCATTCAGTTaGTGGGGCAACAGCACATCT +
Preference number: 4 (lower is better)
Translates to: KEWPAPQPTRSPDDDSRAQKSFS*WGNSTS
Trigger: AGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTG...GGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GCCAAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGTTGCCCATGCTTGTTaGTTCCCCAAACATACACCT +
Preference number: 4 (lower is better)
Translates to: AKEWPAPQPTRSPDDDSRVAHAC*FPKHTP
Trigger: AGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAAC...TCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCTCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FGAQTLASVPSPHMPCSFSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...GAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WLQCHLRTCHAHSSPKSNCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...GTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGAAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: QGTTVVHMMPNQSPTGTRRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...TCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp GTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGDLGVLDQCRVSWQLAECCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...CTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp GAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCCTGGACCAGTCAGATTaGCTTTGGGTTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: EWPAPQPTRSPDDDSRACLDQSD*LWVEVS
Trigger: AGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAG...GCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp ACAGGCCACCTGTTGGATGGGACAGCCAAAGAGGGATTTGCAGGGGGTAAAATAGGTCTCCTCCATCTGTaGCAACTGCAGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TGHLLDGTAKEGFAGGKIGLLHL*QLQSGP
Trigger: GGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACC...TATTTTACCCCCTGCAAATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR TCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGACATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRHLRGP*GTPNWP
Trigger: TGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATG...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp CTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LQCHLRTCHAHSSPKSNTQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...TGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp TGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGCTGGGGAAAGGTAGGTaGCCTTGGGGTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: CPWLSEIQCPRWHLGKGRLGKGR*PWGPGP
Trigger: TGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCAG...CCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCAGTTCAGTATCTGTCTaGGCAACCAGGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPASSVSV*ATRCVH
Trigger: ATGGACACACCTGGTTGCTCAGACAGATACTGAACT...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR TCA 90 bp AATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCATCCCAGATGCAGGCTaGACAGCAGAAAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NGRVCPGHNRRPHDAKPVIPDAG*TAERAE
Trigger: CTCAGCCCTTTCTGCTGTTCAGCCTGCATCTGGGAT...GACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR GCA 90 bp GCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACTCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ATRCSSYCMPQSSSNTNNSICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...GTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp CTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQCHLRTCHAHSSPKSNTRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...TGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATRCSSYCMPQSSSNTNNRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...GTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp CGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: RWLQCHLRTCHAHSSPKSNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...ACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp ATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: MEESAQGTTVVHMMPNQSNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...GGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp GGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGTTGCCCATGCTTGTTaGTTCCCCAAACATACACCT +
Preference number: 4 (lower is better)
Translates to: GKVGDLGVLDQCRVSWQLVAHAC*FPKHTP
Trigger: AGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAAC...CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: FGAQTLASVPSPHMPCSFRRWLQ*HLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCT...GAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTAGACGTTGGCTTCAGTaGCATCTCCGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: LWGPDVGFSAISAHAMLIRRWLQ*HLRTCH
Trigger: ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCT...AATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGATGGAGCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRWSSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCA...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCACAACCTTCTCTTTATaGAGCTCAATGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPATTFSL*SSMAWG
Trigger: TCCCCAGGCCATTGAGCTCCATAAAGAGAAGGTTGT...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGVNEAE*SEPART
Trigger: TGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp AGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: SLHRLWGPDVGFSAISAHVNEAE*SEPART
Trigger: TGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC...ATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCPWLSEIQCPRWHLGKGSLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...ACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CAGGTGTGTCCATCCACTCCAGATGGCAGTGACCTTTTCATTCTGGAAACAATGCAGAGGGCCAAGGAGTaGCCAGCCCCACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QVCPSTPDGSDLFILETMQRAKE*PAPQPT
Trigger: TGTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTG...CATTGTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTGGATGGACACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR TCA 90 bp CCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCACACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PDVGFSAISAHAMLIPAPHSRWQ*PFHSGN
Trigger: GTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTG...TGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp GCCAAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGTTCAGAGAATGAAGTaGTCAATTAGGACCTGGACA +
Preference number: 4 (lower is better)
Translates to: AKEWPAPQPTRSPDDDSRVQRMK*SIRTWT
Trigger: TGTCCAGGTCCTAATTGATCACTTCATTCTCTGAAC...TCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR TCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTTA +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPACQIML*ATRDLL
Trigger: TAACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525920.5
CDS-3UTR TCA 90 bp TGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACACCTCCAGCATGGTTTaGTGGTCTGGTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: CHLRTCHAHSSPKSNTLHTSSMV*WSGHPI
Trigger: GATCGGATGACCAGACCATCAAACCATGCTGGAGGT...GTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR GCA 90 bp GATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTGCTGGGGCAACAGTCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPPDTPGFTEVIQLLGQQSICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...CTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR GCA 90 bp CTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: LWGPDVGFSAISAHAMLIVAATA*LSPAAI
Trigger: TATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTAC...AATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAGAGGGCCAAGGATCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: LGVLDQCRVSWQLAEGQGSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...TCCTTGGCCCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp AACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCATCTCCGCACATGCCATaGTCATTCCAGCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NNGRVCPGHNRRPHDAKPSPHMP*SFQPQE
Trigger: CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGA...TGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR GCA 90 bp TGGGGCACAGGAAGGAAAGCAGCCTCATTAGCCAGTTGCCCATGCTTGTTGCTTCACCTGAGCCTCAGCTaGCACAGCCAATTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: WGTGRKAASLASCPCLLLHLSLS*HSQLVL
Trigger: CAGCACTAATTGGCTGTGGCAGCTGAGGCTCAGGTG...AAGCAACAAGCATGGGCAACTGGCTAATGAGGCTGCTTTCCTTCCTGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp GGAGCTCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATGAGGAACTCCTAAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: GAQWPGEPHIFEVHEELLRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...TAGGAGTTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp CAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: QCHLRTCHAHSSPKSNTLRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGACTGGCCAAAGGAGTTaGATCCACATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: PHSPQGVLTMTAEPAPALTGQRS*IHMIEL
Trigger: AAGTTCTATCATGTGGATCCAACTCCTTTGGCCAGT...CAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCCTTTATGGAGCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: AISAHAMLIPAPRVTHSTLYGAQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG...GGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCATGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PDVGFSAISAHAMLIPAPCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...TGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPAVNEAE*SEPART
Trigger: TGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp AAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAATTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: KNNGRVCPGHNRRPHDAKLGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...TTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp CTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTATTCAGTGTCCTCGATaGCATCTGGGGAAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LWGPDVGFSAISAHAMLIIQCPR*HLGKGR
Trigger: CCTACCTTTCCCCAGATGCCATCGAGGACACTGAAT...AATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp TTGTTCAGGCCACAAACAAAGAGGTCTCCTCCATCTGTGACAACTGCAGAGTGGGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LFRPQTKRSPPSVTTAEWGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...CCACTCTGCAGTTGTCACAGATGGAGGAGACCTCTTTGTTTGTGGCCTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR TCA 90 bp GCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATRCSSYCMPQSSSNTNNHLRGP*GTPNWP
Trigger: TGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATG...GTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp ACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TRCSSYCMPQSSSNTNNLQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...AAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR TCA 90 bp TGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAATTGGACCAATGCAGGGTaGGCTGGCAGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CHAHSSPKSNTLHQLLPNWTNAG*AGSWQR
Trigger: CCTCTGCCAGCTGCCAGCTCACCCTGCATTGGTCCA...ATTTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000527494.5
CDS-3UTR TCA 90 bp ACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: TTVVHMMPNQSPTGTRCHCQIML*ATRDLS
Trigger: AGACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...GTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR GCA 90 bp AAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAATCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KNNGRVCPGHNRRPHDAKSICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...TTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp ACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: TMEESAQGTTVVHMMPNQVAATA*LSPAAI
Trigger: TATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTAC...CTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp AGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATTCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: SLHRLWGPDVGFSAISAHSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...ATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGATTAGCCAGTTGCCCATaGTTGTTGCTTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRLASCP*LLLPQT
Trigger: TGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAA...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCAATTCTGGAAACAATGTaGTTCTATTTTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: CTGFGAQTLASVPSPHMPILETM*FYFLGH
Trigger: GTGCCCCAGAAAATAGAAGCACATTGTTTCCAGAAT...TGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTATTCTGGAAACAATGTaGTTCTATTTTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PALGPRRWLQCHLRTCHAILETM*FYFLGH
Trigger: GTGCCCCAGAAAATAGAAGCACATTGTTTCCAGAAT...AGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATCCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRTCHAHSSPKSNTLHQLSCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGGA...TAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp TGGAACACGATGCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: WNTMPLAVAATACLSPAAAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...TGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGCATCGTGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp CTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LWGPDVGFSAISAHAMLICCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...AATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp ACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTVVHMMPNQSPTGTRCHCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...GTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp TCTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAATTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: SLCPWLSEIQCPRWHLGKLGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...TTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGACAGTCCCCCATTTCTaGACCAGTCAGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TLASVPSPHMPCSFQPQETVPHF*TSQIGF
Trigger: AAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGT...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCACAGTCCCCCATTTCTaGACCAGTCAGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FGAQTLASVPSPHMPCSFTVPHF*TSQIGF
Trigger: AAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGT...GAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp ATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCTACTTCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: MEESAQGTTVVHMMPNQSYFSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGAAGTA...GGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp CCTCCACTCCACAAGTGGACTCACGAAGCACCTGAGCCTCAGCTGCCACAGCCACCACATGATAGAACTTaGCCATTTTCTGTGAGCATA +
Preference number: 4 (lower is better)
Translates to: PPLHKWTHEAPEPQLPQPPHDRT*PFSVSI
Trigger: TATGCTCACAGAAAATGGTCAAGTTCTATCATGTGG...TGGCTGTGGCAGCTGAGGCTCAGGTGCTTCGTGAGTCCACTTGTGGAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR TCA 90 bp ATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTGCTGGGGCAACAGCCATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: ILLTLLGLQKSFSCWGNSHLRGP*GTPNWP
Trigger: TGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATG...GCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR TCA 90 bp TTCTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FSITVPHFWTSQIGFGLKQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...CTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp TGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WFDGLVIRSSALKSLTGFQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...GAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR TCA 90 bp CAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QCHLRTCHAHSSPKSNTLHSRWQ*PFHSGN
Trigger: GTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTG...GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR TCA 90 bp TGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGCACAAGAGACCTGTCTaGGCAACCAGGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CPWLSEIQCPRWHLGKGRHKRPV*ATRCVH
Trigger: ATGGACACACCTGGTTGCTCAGACAGGTCTCTTGTG...CCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp TGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCATCAAAAATGGCTCCATaGCACATGAACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: WGPDVGFSAISAHAMLIPSKMAP*HMNTVI
Trigger: GATCACAGTGTTCATGTGTCATGGAGCCATTTTTGA...TGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR GCA 90 bp GATGCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: DATRCSSYCMPQSSSNTNVAATA*LSPAAI
Trigger: TATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTAC...GTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp CAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCTTAGCCAGTTGCCCATaGTTGTTGCTTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: QCHLRTCHAHSSPKSNTLLASCP*LLLPQT
Trigger: TGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAA...GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp AAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGCAATTCTGGAAACAATGTaGTTCTATTTTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KVGDLGVLDQCRVSWQLAILETM*FYFLGH
Trigger: GTGCCCCAGAAAATAGAAGCACATTGTTTCCAGAAT...TGCCAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCATTCTGGAAACAATGTaGTTCTATTTTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GPDVGFSAISAHAMLIPAILETM*FYFLGH
Trigger: GTGCCCCAGAAAATAGAAGCACATTGTTTCCAGAAT...GGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp CCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: PRRWLQCHLRTCHAHSSPIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp ATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ITVPHFWTSQIGFGLKFLCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...CAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GAGCCAGCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTGGGGTCCTGGACCAATaGAGGGTGAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EPARTHIALEFSRPVTLLGVLDQ*RVSWQL
Trigger: CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCC...AAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp CTTTATGGAGCTCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATGAGGAAAGCACATCTTCCTTATaGCCGAGGCCAAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LYGAQWPGEPHIFEVHEESTSSL*PRPSCP
Trigger: TGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCT...TTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp GCAGCCTCATTAGCCAGTTGCCCATGCTTGTTGCTTCCCCAAACATACACCTCTAGCACATCTTCCTTATaGCCGAGGCCAAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AASLASCPCLLLPQTYTSSTSSL*PRPSCP
Trigger: TGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCT...AGAGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp CAGGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGAACTGGCCAAAGGAGTTaGATCCACATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: QGTTVVHMMPNQSPTGTRTGQRS*IHMIEL
Trigger: AAGTTCTATCATGTGGATCCAACTCCTTTGGCCAGT...TCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
CDS-3UTR CCA 90 bp CAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QCHLRTCHAHSSPKSNTLCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...GAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WLQCHLRTCHAHSSPKSNCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...GTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp ACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACTCGACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TVVHMMPNQSPTGTRCHSTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...CGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp GGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: GHNRRPHDAKPVPHWNTMTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...CATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp ACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: TTVVHMMPNQSPTGTRCHVNEAE*SEPART
Trigger: TGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC...GTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR TCA 90 bp TGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAATGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: CHAHSSPKSNTLHQLLPNGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...ATTTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000527494.5
CDS-3UTR TCA 90 bp GCCTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAGCTGTGAGCATAGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ASVQQQYKQPSLYGAVSIGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...TATGCTCACAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533328.5
CDS-3UTR TCA 90 bp TGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTCAACCGTCGTCCACATaGTGCCAAACCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CSSYCMPQSSSNTNNLLFQPSST*CQTSPP
Trigger: TGGGGGACTGGTTTGGCATCATGTGGACGACGGTTG...AAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR TCA 90 bp CTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTCACAAGAGACCTGTCTaGGCAACCAGGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LCPWLSEIQCPRWHLGKGHKRPV*ATRCVH
Trigger: ATGGACACACCTGGTTGCTCAGACAGGTCTCTTGTG...ACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAATTGCCCATAGCTATTTaGACCCCAGGCGAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: HAMLIPAPRVTHSTNYCQLPIAI*TPGEER
Trigger: GCGCTCTTCGCCTGGGGTGCAAATAGCTATGGGCAA...TTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000528200.5
CDS-3UTR GCA 90 bp TCTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAATTGCCCATAGCTATTTaGACCCCAGGCGAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: SLCPWLSEIQCPRWHLGKLPIAI*TPGEER
Trigger: GCGCTCTTCGCCTGGGGTGCAAATAGCTATGGGCAA...TTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTAGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: LRTCHAHSSPKSNTLHQLVAATA*LSPAAI
Trigger: TATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTAC...TAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp TGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTCGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSSYCMPQSSSNTNNLLFRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...AAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp CTGGAACACGATGCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCTCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: LEHDATRCSSYCMPQSSSSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGCATCGTGTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR GCA 90 bp TCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SAHAMLIPAPRVTHSTNYASLAS*PCLLLP
Trigger: GGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGC...ATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GGGCACAACCGTCGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GHNRRPHDAKPVPHWNTMIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...CATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACGACGGTTGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR GCA 90 bp TCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SITVPHFWTSQIGFGLKFCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...AAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp TCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGHPIISTEVSHRIQKWLCHLRT*HAHSSP
Trigger: GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA...GAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR CCA 90 bp GTCATTCAGTTGCTGGGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTTGGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: VIQLLGQQHIFLMAEAKLAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...CAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp AACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: NNGRVCPGHNRRPHDAKPAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...TGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp GCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: ATRCSSYCMPQSSSNTNNAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...GTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp CGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTACTGGCCAAAGGAGTTaGATCCACATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: RWLQCHLRTCHAHSSPKSTGQRS*IHMIEL
Trigger: AAGTTCTATCATGTGGATCCAACTCCTTTGGCCAGT...ACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGGAGCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: SAHAMLIPAPRVTHSTNYWSSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCA...ATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GCATGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATGGAGCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: AWFDGLVIRSSALKSLTGWSSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCA...TCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp ACAGGCCACCTGTTGGATGGGACAGCCAAAGAGGGATTTGCAGGGGGTAAAATACTTTATGGAGCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: TGHLLDGTAKEGFAGGKILYGAQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG...TATTTTACCCCCTGCAAATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp ATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: ITVPHFWTSQIGFGLKFLKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...CAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp CATGCCTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAGCTGTGAGCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: HASVQQQYKQPSLYGAVSKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...GCTCACAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533328.5
CDS-3UTR CCA 90 bp AACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCATGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NNGRVCPGHNRRPHDAKPCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...TGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp GCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: AISAHAMLIPAPRVTHSTTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...GGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp GTTAATGAAGCTGAGTGGTCTGAGCCAGCAAGAACACACATTGCTTTAGAATTCAGCCTGCACCGGCTTTaGGGCCCAGACGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VNEAEWSEPARTHIALEFSLHRL*GPDVGF
Trigger: GAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCT...GAATTCTAAAGCAATGTGTGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527494.5
3UTR CAA 72 bp GGAAGGAAAGCAGCCTCATTAGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATACACCTCTCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: GRKAASLASCPC*LLPQTYTSPAS
Trigger: AGATGCAGGAGAGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCTGCTTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR TCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAGGGATATCCTCTGTGTaGCCAAGCCCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKGISSV*PSPSCP
Trigger: TGGGCAACTGGGGCTTGGTCACACAGAGGATATCCC...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR TCA 90 bp GCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCCCACATGATAGAACTTaGCCATTTTCTGTGAGCATA +
Preference number: 4 (lower is better)
Translates to: AISAHAMLIPAPRVTHSTPHDRT*PFSVSI
Trigger: TATGCTCACAGAAAATGGTCAAGTTCTATCATGTGG...GGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGCCACATGATAGAACTTaGCCATTTTCTGTGAGCATA +
Preference number: 4 (lower is better)
Translates to: TLASVPSPHMPCSFQPQEPHDRT*PFSVSI
Trigger: TATGCTCACAGAAAATGGTCAAGTTCTATCATGTGG...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCCATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSHLRGP*GTPNWP
Trigger: TGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATG...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR TCA 90 bp TGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGCACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CPWLSEIQCPRWHLGKGRHSRWQ*PFHSGN
Trigger: GTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTG...CCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp GCATGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTGCCAGTTTCTGTCTaGGCAACCAGGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: AWFDGLVIRSSALKSLTGLPVSV*ATRCVH
Trigger: ATGGACACACCTGGTTGCTCAGACAGAAACTGGCAA...TCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS-3UTR TCA 90 bp ACAAAGAGGTCTCCTCCATCTGTGACAACTGCAGAGTGGCCCCCTCCTCCTGTGAAATATGTTTGTTTTTaGAGACACCCAGGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: TKRSPPSVTTAEWPPPPVKYVCF*RHPGEE
Trigger: CTCTTCGCCTGGGTGTCTTCAAAAACAAACATATTT...CACAGGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACCTCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR TCA 90 bp TGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCACCTCCAGCATGGTTTaGTGGTCTGGTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: WFDGLVIRSSALKSLTGFTSSMV*WSGHPI
Trigger: GATCGGATGACCAGACCATCAAACCATGCTGGAGGT...GAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR TCA 90 bp AAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAAAACAGCAGAAAGGGCTaGGCTTTGGCCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KNNGRVCPGHNRRPHDAKNSRKG*ALAFLL
Trigger: AAGAAGGAAGGCCAAAGCTCAGCCCTTTCTGCTGTT...TTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR GCA 90 bp ACAGGCCACCTGTTGGATGGGACAGCCAAAGAGGGATTTGCAGGGGGTAAAATACAGAAGTCATTCAGTTaGTGGGGCAACAGCACATCT +
Preference number: 4 (lower is better)
Translates to: TGHLLDGTAKEGFAGGKIQKSFS*WGNSTS
Trigger: AGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTG...TATTTTACCCCCTGCAAATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR GCA 90 bp GATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATTCCATCTGTGACAACTaGAGAGTGGCCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DGLVIRSSALKSLTGFKNSICDN*RVAPSS
Trigger: GGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGA...ATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR GCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAACGCTGTAGCAGCTACTaGATGCCTCAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKRCSSY*MPQSSS
Trigger: GCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCG...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR GCA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR GCA 90 bp AGTTGCCCATCTTTGTTCAGGCCACAAACAAAGAGGTCTCCTCCATCTGTGACAAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: SCPSLFRPQTKRSPPSVTNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...TGTCACAGATGGAGGAGACCTCTTTGTTTGTGGCCTGAACAAAGATGGGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533328.5
CDS-3UTR GCA 90 bp GGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLVIRSSALKSLTGFKNGASLAS*PCLLLP
Trigger: GGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGC...GCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSASLAS*PCLLLP
Trigger: GGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGC...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCGCTCCAGTTAAGCAATaGGGAGACGAAGGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSAPVKQ*GDEGML
Trigger: CAGCATGCCTTCGTCTCCGCATTGCTTAACTGGAGC...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS-3UTR GCA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: TLASVPSPHMPCSFQPQEIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CTGTTGGATGGGACAGCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATATCAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: LLDGTAKEGFAGGKIWDIRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...GATATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTGTCCCATCCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR CCA 90 bp TGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACACTGGCCAAAGGAGTTaGATCCACATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: CHLRTCHAHSSPKSNTLHTGQRS*IHMIEL
Trigger: AAGTTCTATCATGTGGATCCAACTCCTTTGGCCAGT...GTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp ACAGCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATATCCTCTGTGTGACCTGGAGCTCAATGGCCTaGGGAACCACACATCTTCGA +
Preference number: 4 (lower is better)
Translates to: TAKEGFAGGKIWDILCVTWSSMA*GTTHLR
Trigger: TCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCCA...GGTCACACAGAGGATATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp TCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATCTTTATGGAGCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: SAHAMLIPAPRVTHSTNYLYGAQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG...ATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGCTTTATGGAGCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: LFVHGFLRFSVLDGIWGKLYGAQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG...CTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCTTGGGGCCCAGACGTTaGCTTCAGTGCCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: FLDQSDWLWVEVSDCLSFLGPRR*LQCHLR
Trigger: GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAA...GAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGTCAGATTGGCTTTaGGTTGAAGTTTCTGATTGT +
Preference number: 4 (lower is better)
Translates to: FGAQTLASVPSPHMPCSFQSDWL*VEVSDC
Trigger: ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTG...GAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CCTCCTGTGATCCTCCTGACACTCCTGGGTTTACAGAAGTCATTCAGTTGCTGGTTTGCACCTCCTAGCTaGTTCTTCCTGGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: PPVILLTLLGLQKSFSCWFAPPS*FFLEMR
Trigger: TCTCATCTCCAGGAAGAACCAGCTAGGAGGTGCAAA...CCAGCAACTGAATGACTTCTGTAAACCCAGGAGTGTCAGGAGGATCACAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR TCA 90 bp GCATGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGACACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AWFDGLVIRSSALKSLTGHSRWQ*PFHSGN
Trigger: GTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTG...TCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR TCA 90 bp TGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCACAAGAGACCTGTCTaGGCAACCAGGTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WSGHPIISTEVSHRIQKWHKRPV*ATRCVH
Trigger: ATGGACACACCTGGTTGCTCAGACAGGTCTCTTGTG...CCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR TCA 90 bp GCATGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATCCGATCATCAGCACTaGAGTCTCTCACAGGATTCA +
Preference number: 4 (lower is better)
Translates to: AWFDGLVIRSSALKSLTGSDHQH*SLSQDS
Trigger: TGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGA...TCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp CATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: HAMLIPAPRVTHSTNYCQVAATA*LSPAAI
Trigger: TATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTAC...TTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp TGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACTCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: CHLRTCHAHSSPKSNTLHSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...GTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGCCTCATTAGCCAGTTaGCCATGCTTGTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YHSPPFLDQSDWLWVEVSASLAS*PCLLLP
Trigger: GGGAAGCAACAAGCATGGGCAACTGGCTAATGAGGC...AGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGCGGAGACGAAGGCATaGTGTTCGGTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCAETKA*CSVVLN
Trigger: GTTCAAGACCACCGAACAGCATGCCTTCGTCTCCGC...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS-3UTR GCA 90 bp ACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTACACAACATCCCAGATaGAGGCTGAACAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TRCSSYCMPQSSSNTNNLTQHPR*RLNSRK
Trigger: CTTTCTGCTGTTCAGCCTGCATCTGGGATGTTGTGT...AAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR CCA 90 bp TGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: WSGHPIISTEVSHRIQKWRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...CCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp TGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCCTTTATGGAGCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: WFDGLVIRSSALKSLTGFLYGAQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGCTCCATAAAG...GAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp AAAAACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAAACAACCTTCTCTTTATaGAGCTCAATGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KNNGRVCPGHNRRPHDAKTTFSL*SSMAWG
Trigger: TCCCCAGGCCATTGAGCTCCATAAAGAGAAGGTTGT...TTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CCA 90 bp TCTAGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCAAACCAGTCCCCCACTaGAACACGATGCCACTCGCT +
Preference number: 4 (lower is better)
Translates to: SRPVTLLGSFAVKNNGRVKPVPH*NTMPLA
Trigger: AGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTT...GACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
CDS-3UTR CCA 90 bp TCTGAGCCAGCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCCTCCACTCCACAAGTaGACTCACGAAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SEPARTHIALEFSRPVTLPPLHK*THEAPE
Trigger: CTCAGGTGCTTCGTGAGTCCACTTGTGGAGTGGAGG...CAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGCTGGCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR TCA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCTGCCAAATTATGCTCTaGGCCACAAGAGACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSCQIML*ATRDLS
Trigger: ACTGAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS-3UTR TCA 90 bp CTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTGCCAAATTATGCTCTaGGCCACAAGAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: LYHSPPFLDQSDWLWVEVCQIML*ATRDLL
Trigger: CAGTAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...AACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR GCA 90 bp GGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGTAGCAGCTACTGCATaGCTCAGTCCAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: GHPIISTEVSHRIQKWLHVAATA*LSPAAI
Trigger: TATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTAC...ATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR GCA 90 bp TCTAGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCAACAATGGAAGAGTCTaGCCAGGGCACAACCGTCGT +
Preference number: 4 (lower is better)
Translates to: SRPVTLLGSFAVKNNGRVNNGRV*PGHNRR
Trigger: ACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGTT...GACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
CDS-3UTR GCA 90 bp CTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACATCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: LQCHLRTCHAHSSPKSNTSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...TGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR GCA 90 bp TTCTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGGTTGCCCATGCTTGTTaGTTCCCCAAACATACACCT +
Preference number: 4 (lower is better)
Translates to: FSITVPHFWTSQIGFGLKVAHAC*FPKHTP
Trigger: AGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAAC...CTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp TGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCGTTGCCCATGCTTGTTaGTTCCCCAAACATACACCT +
Preference number: 4 (lower is better)
Translates to: WFDGLVIRSSALKSLTGFVAHAC*FPKHTP
Trigger: AGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAAC...GAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp ATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGTTAGCCAGTTGCCCATaGTTGTTGCTTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: ITVPHFWTSQIGFGLKFLLASCP*LLLPQT
Trigger: TGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAA...CAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp CTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACAATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: LQCHLRTCHAHSSPKSNTIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...TGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CCA 90 bp TTCTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: FSITVPHFWTSQIGFGLKAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...CTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TGCCCATCTTTGTTCAGGCCACAAACAAAGAGGTCTCCTCCATCTGTGACAACTACAACCTTCTCTTTATaGAGCTCAATGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CPSLFRPQTKRSPPSVTTTTFSL*SSMAWG
Trigger: TCCCCAGGCCATTGAGCTCCATAAAGAGAAGGTTGT...AGTTGTCACAGATGGAGGAGACCTCTTTGTTTGTGGCCTGAACAAAGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp TGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTAGGACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: CPWLSEIQCPRWHLGKGRTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...CCTACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CCACATCAGCAAAACTGGGATAATAATACTTACCTTGCAGAGATACAATTATTGCAGAGGGCCAAGGAGTaGCCAGCCCCACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PHQQNWDNNTYLAEIQLLQRAKE*PAPQPT
Trigger: TGTGGGCTGTGGGGCTGGCCACTCCTTGGCCCTCTG...CAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR CCA 90 bp TCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTATTCAGTGTCCTCGATaGCATCTGGGGAAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SITVPHFWTSQIGFGLKFIQCPR*HLGKGR
Trigger: CCTACCTTTCCCCAGATGCCATCGAGGACACTGAAT...AAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGGTCTGGACCAGTCAGATTaGCTTTGGGTTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LCPWLSEIQCPRWHLGKGLDQSD*LWVEVS
Trigger: AGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAG...ACCTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TTCTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGACAGTCCCCCATTTCTaGACCAGTCAGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FSITVPHFWTSQIGFGLKTVPHF*TSQIGF
Trigger: AAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGT...CTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAGCACAACCTTCTCTTTATaGAGCTTTATGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ATACLSPAAIQTTFSLWSTTFSL*SFMPRA
Trigger: GGCCCTGGGCATAAAGCTCCATAAAGAGAAGGTTGT...GCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp TTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCCATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLDQSDWLWVEVSDCLSFHLRGP*GTPNWP
Trigger: TGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATG...GAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR TCA 90 bp CATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAATTATCATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: HAHSSPKSNTLHQLLPNYHLRGP*GTPNWP
Trigger: TGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATG...ATAATTTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000527494.5
CDS-3UTR TCA 90 bp GTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGCACTCCAGATGGCAGTaGCCTTTTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: VIRSSALKSLTGFKNGSMHSRWQ*PFHSGN
Trigger: GTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTG...CATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR TCA 90 bp AGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPPFLDQSDWLWVEVSDCCQIML*ATRDLS
Trigger: AGACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000528200.5
CDS-3UTR GCA 90 bp TGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGGTTGCCCATGCTTGTTaGTTCCCCAAACATACACCT +
Preference number: 4 (lower is better)
Translates to: WSGHPIISTEVSHRIQKWVAHAC*FPKHTP
Trigger: AGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAAC...CCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp GTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGTTAGCCAGTTGCCCATaGTTGTTGCTTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: VIRSSALKSLTGFKNGSMLASCP*LLLPQT
Trigger: TGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAA...CATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp AGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCTGCCTTTATGGAGCTTTATaGCCAGGGCCTAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: RPVTLLGSFAVKNNGRVCLYGAL*PGPKHQ
Trigger: TTGGTGCTTAGGCCCTGGGCATAAAGCTCCATAAAG...GCAGACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR CCA 90 bp ATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAATTATGAGCACATCTTCCTTATaGCCGAGGCCAAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: MLIPAPRVTHSTNYCQIMSTSSL*PRPSCP
Trigger: TGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCT...CATAATTTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000527494.5
CDS-3UTR CCA 90 bp TTCTCTAGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAAGGCCACCTGTTGGATaGGACAGCCAAAGAGGGATT +
Preference number: 4 (lower is better)
Translates to: FSRPVTLLGSFAVKNNGRRPPVG*DSQRGI
Trigger: AATCCCTCTTTGGCTGTCCCATCCAACAGGTGGCCT...TCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
CDS-3UTR CCA 90 bp GCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAATTACAACCTTCTCTTTATaGAGCTCAATGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AMLIPAPRVTHSTNYCQITTFSL*SSMAWG
Trigger: TCCCCAGGCCATTGAGCTCCATAAAGAGAAGGTTGT...AATTTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000527494.5
CDS-3UTR CCA 90 bp TGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGTGCTGTGAAAAACAATaGAAGAGTCTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WSGHPIISTEVSHRIQKWCCEKQ*KSLPRA
Trigger: TGCCCTGGGCAGACTCTTCCATTGTTTTTCACAGCA...CCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAAGACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LFVHGFLRFSVLDGIWGKTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...CTTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: GLVIRSSALKSLTGFKNGVNEAE*SEPART
Trigger: TGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC...GCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR CCA 90 bp TTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCCATTCAGTGTCCTCGATaGCATCTGGGGAAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: FWTSQIGFGLKFLIVFPSIQCPR*HLGKGR
Trigger: CCTACCTTTCCCCAGATGCCATCGAGGACACTGAAT...GGAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp CTCTATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTCTGGACCAGTCAGATTaGCTTTGGGTTGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LYHSPPFLDQSDWLWVEVLDQSD*LWVEVS
Trigger: AGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAG...AACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGCATGGTTTGATGGTCTaGTCATCCGATCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: VIRSSALKSLTGFKNGSMHGLMV*SSDHQH
Trigger: GTGCTGATGATCGGATGACCAGACCATCAAACCATG...CATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
3UTR CAA 72 bp AAAATATGGGATATCCTCTGTGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCCACAAACAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: KIWDILCVTKPQ*PIFVQATNKEV
Trigger: GACCTCTTTGTTTGTGGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCACACAGAGGATATCCCATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR TCA 90 bp ACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCCACATGATAGAACTTaGCCATTTTCTGTGAGCATA +
Preference number: 4 (lower is better)
Translates to: TRCSSYCMPQSSSNTNNLPHDRT*PFSVSI
Trigger: TATGCTCACAGAAAATGGTCAAGTTCTATCATGTGG...AAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTTCCGATCATCAGCACTaGAGTCTCTCACAGGATTCA +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCSDHQH*SLSQDS
Trigger: TGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGA...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp TCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACGTTGCCCATGCTTGTTaGTTCCCCAAACATACACCT +
Preference number: 4 (lower is better)
Translates to: SALKSLTGFKNGSMTHEHVAHAC*FPKHTP
Trigger: AGGTGTATGTTTGGGGAAGCAACAAGCATGGGCAAC...GTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTTTAGCCAGTTGCCCATaGTTGTTGCTTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCLASCP*LLLPQT
Trigger: TGTTTGGGGAAGCAACAAGCATGGGCAACTGGCTAA...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp GCATGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGAATTCTGGAAACAATGTaGTTCTATTTTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: AWFDGLVIRSSALKSLTGILETM*FYFLGH
Trigger: GTGCCCCAGAAAATAGAAGCACATTGTTTCCAGAAT...TCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CCA 90 bp TCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACGCAGGGGGTAAAATATaGGATATCCTCTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: SALKSLTGFKNGSMTHEHAGGKI*DILCVT
Trigger: GGTCACACAGAGGATATCCCATATTTTACCCCCTGC...GTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp ACAGCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATATCCTCTGTGTGACCACTGGCCAAAGGAGTTaGATCCACATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: TAKEGFAGGKIWDILCVTTGQRS*IHMIEL
Trigger: AAGTTCTATCATGTGGATCCAACTCCTTTGGCCAGT...GGTCACACAGAGGATATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CCA 90 bp TGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: WSGHPIISTEVSHRIQKWVNEAE*SEPART
Trigger: TGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAAC...CCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR CCA 90 bp TCTCTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGACAGTCAGATTGGCTTTaGGTTGAAGTTTCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SLFVHGFLRFSVLDGIWGQSDWL*VEVSDC
Trigger: ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTG...TCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTCATGGTTTGATGGTCTaGTCATCCGATCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCHGLMV*SSDHQH
Trigger: GTGCTGATGATCGGATGACCAGACCATCAAACCATG...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAACATGGTTTGATGGTCTaGTCATCCGATCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKHGLMV*SSDHQH
Trigger: GTGCTGATGATCGGATGACCAGACCATCAAACCATG...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR TCA 90 bp ACAGCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATATCCTCTGTGTGACCCCACATGATAGAACTTaGCCATTTTCTGTGAGCATA +
Preference number: 4 (lower is better)
Translates to: TAKEGFAGGKIWDILCVTPHDRT*PFSVSI
Trigger: TATGCTCACAGAAAATGGTCAAGTTCTATCATGTGG...GGTCACACAGAGGATATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR GCA 90 bp GGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GLVIRSSALKSLTGFKNGIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...GCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CCA 90 bp TCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SGHPIISTEVSHRIQKWLTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...GAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR CCA 90 bp CAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QLLHASVQQQYKQPSLYGTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...TCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CCA 90 bp TCTCTTTGTCCATGGCTTTCTGAGATTCAGTGTCCTCGATGGCATCTGGGGAAACAGTCAGATTGGCTTTaGGTTGAAGTTTCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SLCPWLSEIQCPRWHLGKQSDWL*VEVSDC
Trigger: ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTG...TTTCCCCAGATGCCATCGAGGACACTGAATCTCAGAAAGCCATGGACAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CCA 90 bp TCTGAGCCAGCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGAACTATACTTCTCAATaGCCTGGGGAACCACACATC +
Preference number: 4 (lower is better)
Translates to: SEPARTHIALEFSRPVTLNYTSQ*PGEPHI
Trigger: GATGTGTGGTTCCCCAGGCCATTGAGAAGTATAGTT...CAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGCTGGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp GATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATTCAAAAATGGCTCCATaGCACATGAACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: DGLVIRSSALKSLTGFKNSKMAP*HMNTVI
Trigger: GATCACAGTGTTCATGTGTCATGGAGCCATTTTTGA...ATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR TCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTTCAAAAATGGCTCCATaGCACATGAACACTGTGATC +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCSKMAP*HMNTVI
Trigger: GATCACAGTGTTCATGTGTCATGGAGCCATTTTTGA...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp GGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATATTATTGCCAAATTATaGTCTGAGCCACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GHPIISTEVSHRIQKWLHIIAKL*SEPQET
Trigger: GGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT...ATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTACCTGTCACTCTGCTTaGTTCCTTTGCTGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCTCHSA*FLCCEK
Trigger: TTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGT...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR CCA 90 bp AGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAAACAATGGAAGAGTCTGCACAACCTTCTCTTTATaGAGCTGTGAGCATAATCGT +
Preference number: 4 (lower is better)
Translates to: RPVTLLGSFAVKNNGRVCTTFSL*SCEHNR
Trigger: ACGATTATGCTCACAGCTCCATAAAGAGAAGGTTGT...GCAGACTCTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533328.5
CDS-3UTR CCA 90 bp ATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAGAAAGGGCTGAGCTTTaGCCTTCCTTCTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: IALEFSRPVTLLGSFAVKERAEL*PSFFWK
Trigger: TTTCCAGAAGAAGGAAGGCCAAAGCTCAGCCCTTTC...TTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp TCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACCCACATGATAGAACTTaGCCATTTTCTGTGAGCATA +
Preference number: 4 (lower is better)
Translates to: SALKSLTGFKNGSMTHEHPHDRT*PFSVSI
Trigger: TATGCTCACAGAAAATGGTCAAGTTCTATCATGTGG...GTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR TCA 90 bp ATTATTGCCAAATTATGCTCTGAGCCACAAGAGACCTTGCTATTACTCCAAAAGTCCGATCATCAGCACTaGAGTCTCTCACAGGATTCA +
Preference number: 4 (lower is better)
Translates to: IIAKLCSEPQETLLLLQKSDHQH*SLSQDS
Trigger: TGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGA...CTTTTGGAGTAATAGCAAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR GCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAATCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR GCA 90 bp GCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTATTCTGGAAACAATGTaGTTCTATTTTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALKSLTGFKNGSMTHEHCILETM*FYFLGH
Trigger: GTGCCCCAGAAAATAGAAGCACATTGTTTCCAGAAT...ACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR GCA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAGCCACAAGAGACCTTaGTATTACTCCAAAAGACTA +
Preference number: 4 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKSHKRP*YYSKRL
Trigger: TAGTCTTTTGGAGTAATAGCAAGGTCTCTTGTGGCT...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR CCA 90 bp TCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAAACTGGCCAAAGGAGTTaGATCCACATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: SSALKSLTGFKNGSMTHETGQRS*IHMIEL
Trigger: AAGTTCTATCATGTGGATCCAACTCCTTTGGCCAGT...TTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp GAGCCAGCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTTGGCCTTCCTTCTTCTaGAAACTATACTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: EPARTHIALEFSRPVTLLWPSFF*KLYFSM
Trigger: CATTGAGAAGTATAGTTTCCAGAAGAAGGAAGGCCA...AAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGCTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR TCA 90 bp CCACATCAGCAAAACTGGGATAATAATACTTACCTTGCAGAGATACAATTATTGTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: PHQQNWDNNTYLAEIQLLCQIML*ATRDLS
Trigger: AGACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCA...CAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp CCACATCAGCAAAACTGGGATAATAATACTTACCTTGCAGAGATACAATTATTGACAACCTTCTCTTTATaGAGCTCAATGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PHQQNWDNNTYLAEIQLLTTFSL*SSMAWG
Trigger: TCCCCAGGCCATTGAGCTCCATAAAGAGAAGGTTGT...CAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CCA 90 bp CTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATCCACATCAGCAAAACTaGGATAATAATACTTACCTT +
Preference number: 4 (lower is better)
Translates to: LKSLTGFKNGSMTHEHCDPHQQN*DNNTYL
Trigger: AAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG...ATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CCA 90 bp TCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACCACATCAGCAAAACTaGGATAATAATACTTACCTT +
Preference number: 4 (lower is better)
Translates to: SSALKSLTGFKNGSMTHEPHQQN*DNNTYL
Trigger: AAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG...TTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
3UTR CAA 72 bp TGGGATAATAATACTTACCTTGCAGAGATACAATTATaGCCAAATTATGCTCTGAGCCACAAGAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: WDNNTYLAEIQL*PNYALSHKRPC
Trigger: GCAAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR GCA 90 bp CCACATCAGCAAAACTGGGATAATAATACTTACCTTGCAGAGATACAATTATTGTCTGCTTGGTTCCTTTaGTGTGAAAAACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: PHQQNWDNNTYLAEIQLLSAWFL*CEKQWK
Trigger: CTTCCATTGTTTTTCACAGCAAAGGAACCAAGCAGA...CAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS-3UTR CCA 90 bp ACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATCTTGAGTATATCCCACATCAGCAAAACTaGGATAATAATACTTACCTT +
Preference number: 4 (lower is better)
Translates to: TGFKNGSMTHEHCDLEYIPHQQN*DNNTYL
Trigger: AAGGTAAGTATTATTATCCCAGTTTTGCTGATGTGG...GATATACTCAAGATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS GCA 90 bp TCAACCCAGAGCCCGGCTCGGACCTCAGCCGCCCAGCCCCTGAACTaGCCACGCCGCGGCCAGCAGCTCCCACATCTCGGCGCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: STQSPARTSAAQPLN*PRRGQQLPHLGAPQ
Trigger: CTGAGGGGCGCCGAGATGTGGGAGCTGCTGGCCGCGGCGTGGGCAGTTCAGGGGCTGGGCGGCTGAGGTCCGAGCCGGGCTCTGGGTTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529728.5
CDS GCA 90 bp CCAGGCGCTATTCGGGCTGGAGGGCTCTCGCGGAACCAGACGCTCTaGCCCGAGGCAGGTTCTTCCCGCGGCGCCACAGCCCCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: PGAIRAGGLSRNQTL*PEAGSSRGATAPPA
Trigger: GGCCGGAGGGGCTGTGGCGCCGCGGGAAGAACCTGCCTCGGGGCAGAGCGTCTGGTTCCGCGAGAGCCCTCCAGCCCGAATAGCGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529728.5
CDS TCA 90 bp ATCCTTCAACCCAGAGCCCGGCTCGGACCTCAGCCGCCCAGCCCCTaGACTGCCCACGCCGCGGCCAGCAGCTCCCACATCTCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ILQPRARLGPQPPSP*TAHAAASSSHISAP
Trigger: GGGCGCCGAGATGTGGGAGCTGCTGGCCGCGGCGTGGGCAGTTCAGGGGCTGGGCGGCTGAGGTCCGAGCCGGGCTCTGGGTTGAAGGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529728.5
CDS CCA 90 bp CTCTCCACCGAGCCCTCCGCGCTGTCTTCCAGGCGCTATTCGGGCTaGAGGGCTCTCGCGGAACCAGACGCTCTGCCCCGAGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LSTEPSALSSRRYSG*RALAEPDALPRGRF
Trigger: GAACCTGCCTCGGGGCAGAGCGTCTGGTTCCGCGAGAGCCCTCCAGCCCGAATAGCGCCTGGAAGACAGCGCGGAGGGCTCGGTGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529728.5
CDS-3UTR CAA 90 bp GAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACAGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: EPAPALGPRRWLQCHLRTEPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...TGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 5 (lower is better)
Translates to: GQPHSPQGVLTMTAEPAPFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...CGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: GKVGDLGVLDQCRVSWQLEPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp AAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 5 (lower is better)
Translates to: KEWPAPQPTRSPDDDSRAFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...GGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 5 (lower is better)
Translates to: APALGPRRWLQCHLRTCHFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp CGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 5 (lower is better)
Translates to: RLWGPDVGFSAISAHAMLFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...GAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGTTGCCCATAGCTATTaGCACCCTCAGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: APALGPRRWLQCHLRTCHVAHSY*HPQPPS
Trigger: GCTGGGCGGCTGAGGGTGCAAATAGCTATGGGCAAC...ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CAA 90 bp GCCAAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: AKEWPAPQPTRSPDDDSRVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...TCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: PALGPRRWLQCHLRTCHAVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...AGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCTTTGGGGCCCAGACGTaGGCTTCAGTGCCATCTCCG +
Preference number: 5 (lower is better)
Translates to: PRRWLQCHLRTCHAHSSPFGAQT*ASVPSP
Trigger: CGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA...GGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: DVGFSAISAHAMLIPAPREPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: TLASVPSPHMPCSFQPQEEPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACC +
Preference number: 5 (lower is better)
Translates to: APALGPRRWLQCHLRTCHMAEAK*PIAICT
Trigger: GGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCAT...ATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp GGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGCAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: GQPHSPQGVLTMTAEPAPQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...CGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTAGCCTCATTAGCCAGTaGCCCATGCTTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QPHSPQGVLTMTAEPAPASLISQ*PMLVAS
Trigger: GGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCT...AGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCTCTTC +
Preference number: 5 (lower is better)
Translates to: PALGPRRWLQCHLRT*HAHSSPKSNTLHLF
Trigger: GAAGAGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524589.5
CDS GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACAGTTCC +
Preference number: 5 (lower is better)
Translates to: PALGPRRWLQCHLRT*HAHSSPKSNTLHSS
Trigger: GGAACTGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS GCA 90 bp CCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATaGCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCTATGC +
Preference number: 5 (lower is better)
Translates to: PALGPRRWLQCHLRT*HAHSSPKSNTLHLC
Trigger: GCATAGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531926.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: QPHSPQGVLTMTAEPAPATEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...AGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: PAPALGPRRWLQCHLRTCQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...GCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp GCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGAGTTGCCCATGCTTGTaGCTTCCCCAAACATACACC +
Preference number: 5 (lower is better)
Translates to: ACTGFGAQTLASVPSPHMSCPCL*LPQTYT
Trigger: GGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACT...CATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp CACAGCCCACAAGGAGTCCTGACGATGACAGCAGAGCCTGCACCGGCTTTGGGGGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATAC +
Preference number: 5 (lower is better)
Translates to: HSPQGVLTMTAEPAPALGASCPC*LLPQTY
Trigger: GTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGC...CCCCAAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp ACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCAGCCTCATTAGCCAGTaGCCCATGCTTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: TGFGAQTLASVPSPHMPCSLISQ*PMLVAS
Trigger: GGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCT...GCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp CTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTAACACAGAGCCTGCACCGGCTTaGGGGCCCAGACGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LQCHLRTCHAHSSPKSNTEPAPA*GPRRWL
Trigger: AAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTC...TGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525422.5
ENST00000525920.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp CGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTGTTGCCCATAGCTATTaGCACCCCAGGCGAAGAGCG +
Preference number: 5 (lower is better)
Translates to: RWLQCHLRTCHAHSSPKSVAHSY*HPRRRA
Trigger: CGCTCTTCGCCTGGGGTGCAAATAGCTATGGGCAAC...ACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000528200.5
CDS-3UTR CAA 90 bp ACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: TGFGAQTLASVPSPHMPCTEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...GCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp GACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: DVGFSAISAHAMLIPAPRVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...TCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp GCAGAGCCTGCACCGGCTTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCAACTGGCCAAAGGAGTaGGATCCACATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: AEPAPALGPRRWLQCHLRNWPKE*DPHDRT
Trigger: AGTTCTATCATGTGGATCCAACTCCTTTGGCCAGTT...GCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAAGCCGGTGCAGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp GCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATAC +
Preference number: 5 (lower is better)
Translates to: AQTLASVPSPHMPCSFQPASCPC*LLPQTY
Trigger: GTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGC...GGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp ACAATGGAAGAGTCTGCCCAGGGCACAACCGTCGTCCACATGATGCCAAACCAGGTTGCCCATAGCTATTaGCACCCTCAGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TMEESAQGTTVVHMMPNQVAHSY*HPQPPS
Trigger: GCTGGGCGGCTGAGGGTGCAAATAGCTATGGGCAAC...CTGGTTTGGCATCATGTGGACGACGGTTGTGCCCTGGGCAGACTCTTCCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CAA 90 bp TGGGGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCACCTCCAGCATGGTTaGATGGTCTGGTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: WGKVGDLGVLDQCRVSWQHLQHG*MVWSSD
Trigger: ATCGGATGACCAGACCATCAAACCATGCTGGAGGTG...CTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR CAA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACC +
Preference number: 5 (lower is better)
Translates to: TLASVPSPHMPCSFQPQEMAEAK*PIAICT
Trigger: GGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCAT...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp TGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAAGCCTCATTAGCCAGTaGCCCATGCTTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: WGPDVGFSAISAHAMLIPSLISQ*PMLVAS
Trigger: GGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCT...TGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS-3UTR CAA 90 bp GCCAAGGAGTGGCCAGCCCCACAGCCCACAAGGAGTCCTGACGATGACAGCAGAAACTGGCCAAAGGAGTaGGATCCACATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: AKEWPAPQPTRSPDDDSRNWPKE*DPHDRT
Trigger: AGTTCTATCATGTGGATCCAACTCCTTTGGCCAGTT...TCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTGGGGCTGGCCACTCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGTGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATAC +
Preference number: 5 (lower is better)
Translates to: RWLQCHLRTCHAHSSPKSASCPC*LLPQTY
Trigger: GTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGC...ACTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
ENST00000532546.5
CDS GCA 90 bp TGGCTTTCTACACATGGTGCCCCTCAGCCTGTGAGTTCTTTAATATaGTCAAATGCCACTTCCCGGGCAGGGAGGCCAGCTCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: WLSTHGAPQPVSSLI*SNATSRAGRPAQVP
Trigger: TGGTACCTGAGCTGGCCTCCCTGCCCGGGAAGTGGCATTTGAGCATATTAAAGAACTCACAGGCTGAGGGGCACCATGTGTAGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525168.1
CDS-3UTR CAA 90 bp TTTGGGGCCCAGACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: FGAQTLASVPSPHMPCSFTEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...GAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGTCTGGGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp ACGTTGGCTTCAGTGCCATCTCCGCACATGCCATGCTCATTCCAGCCCCAAGAGCAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: TLASVPSPHMPCSFQPQEQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...CTCTTGGGGCTGGAATGAGCATGGCATGTGCGGAGATGGCACTGAAGCCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CGTCCACATGATGCCAAACCAGTCCCCCACTGGAACACGATGCCACTCGCTGTACAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: RPHDAKPVPHWNTMPLAVQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...TACAGCGAGTGGCATCGTGTTCCAGTGGGGGACTGGTTTGGCATCATGTGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CAA 90 bp ACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTGTTGCCCATAGCTATTaGCACCCTCAGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TRCSSYCMPQSSSNTNNLVAHSY*HPQPPS
Trigger: GCTGGGCGGCTGAGGGTGCAAATAGCTATGGGCAAC...AAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CAA 90 bp ACAAAGAGGTCTCCTCCATCTGTGACAACTGCAGAGTGGCCCCCTCCTCCTGTGGTTGCCCATAGCTATTaGCACCTCCTAGCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TKRSPPSVTTAEWPPPPVVAHSY*HLLAGS
Trigger: AGAACCAGCTAGGAGGTGCAAATAGCTATGGGCAAC...CACAGGAGGAGGGGGCCACTCTGCAGTTGTCACAGATGGAGGAGACCTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS CCA 90 bp CTCATTCCAGCCCCAAGAGTAACACACTCCACAGTTCCATGTGGTTaGGGAGGCCTCACAATCGTGGCAGAAGACAAGGAGAAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: LIPAPRVTHSTVPCG*GGLTIVAEDKEKQV
Trigger: GACTTGCTTCTCCTTGTCTTCTGCCACGATTGTGAGGCCTCCCCAACCACATGGAACTGTGGAGTGTGTTACTCTTGGGGCTGGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS CCA 90 bp CATGCTCATTCCAGCCCCAAGAGTAACACACTCCACAGTTCCATGTaGTTGGGGAGGCCTCACAATCGTGGCAGAAGACAAGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: HAHSSPKSNTLHSSM*LGRPHNRGRRQGEA
Trigger: TGCTTCTCCTTGTCTTCTGCCACGATTGTGAGGCCTCCCCAACCACATGGAACTGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS-3UTR CAA 90 bp GGAGCTCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATGAGGAACTCCTACAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: GAQWPGEPHIFEVHEELLQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...TAGGAGTTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CAA 90 bp CTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCGTTGCCCATAGCTATTaGCACCCTCAGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LVIRSSALKSLTGFKNGSVAHSY*HPQPPS
Trigger: GCTGGGCGGCTGAGGGTGCAAATAGCTATGGGCAAC...GGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS GCA 90 bp TACACATGGTGCCCCTCAGCCTGTGAGTTCTTTAATATGCTCAAATaGCACTTCCCGGGCAGGGAGGCCAGCTCAGGTACCAATTATTGC +
Preference number: 5 (lower is better)
Translates to: YTWCPSACEFFNMLK*HFPGREASSGTNYC
Trigger: GCAATAATTGGTACCTGAGCTGGCCTCCCTGCCCGGGAAGTGGCATTTGAGCATATTAAAGAACTCACAGGCTGAGGGGCACCATGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525168.1
CDS-3UTR CAA 90 bp ATCACAGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGGTTGCCCATAGCTATTaGCACCCCAGGCGAAGAGCG +
Preference number: 5 (lower is better)
Translates to: ITVPHFWTSQIGFGLKFLVAHSY*HPRRRA
Trigger: CGCTCTTCGCCTGGGGTGCAAATAGCTATGGGCAAC...CAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACTGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CTGGGTTTACAGAAGTCATTCAGTTGCTGGGGCAACAGCACATCTTCCTTATGGGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LGLQKSFSCWGNSTSSLWVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...CCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGTAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CAA 90 bp TGGAACACGATGCCACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAAACTGGCCAAAGGAGTaGGATCCACATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: WNTMPLAVAATACLSPAANWPKE*DPHDRT
Trigger: AGTTCTATCATGTGGATCCAACTCCTTTGGCCAGTT...TGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGTGGCATCGTGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR CAA 90 bp GGAAAGGTAGGTGACCTTGGGGTCCTGGACCAATGCAGGGTGAGCTGGCAGCTGCAGATTGGCTTTGGGTaGAAGTTTCTGATTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GKVGDLGVLDQCRVSWQLQIGFG*KFLIVF
Trigger: AAAGACAATCAGAAACTTCAACCCAAAGCCAATCTG...CAGCTGCCAGCTCACCCTGCATTGGTCCAGGACCCCAAGGTCACCTACCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS GCA 90 bp AGGAGATGCCATCTAAAGCTAGTCTCAGTTGCTCCAGTTAAGCAATaGGGAGACGAAGGCATGCTGTTCGGTGGTCTTGAACAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RRCHLKLVSVAPVKQ*GDEGMLFGGLEQGR
Trigger: TCTCCCCTGTTCAAGACCACCGAACAGCATGCCTTCGTCTCCGCATTGCTTAACTGGAGCAACTGAGACTAGCTTTAGATGGCATCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR CAA 90 bp TCTTTGTTCAGGCCACAAACAAAGAGGTCTCCTCCATCTGTGACAACTGCAGAGATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACC +
Preference number: 5 (lower is better)
Translates to: SLFRPQTKRSPPSVTTAEMAEAK*PIAICT
Trigger: GGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCAT...CTCTGCAGTTGTCACAGATGGAGGAGACCTCTTTGTTTGTGGCCTGAACAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR CAA 90 bp GCATGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGAAGCCTCATTAGCCAGTaGCCCATGCTTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: AWFDGLVIRSSALKSLTGSLISQ*PMLVAS
Trigger: GGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCT...TCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS TCA 90 bp AGGAATTCATCTCCACATCTCCCACTGTGCAGTTCAGTATCTGTCTaGGCAACCAGGTGTGTCCATCCACTCCAGATGGCAGTGACCTTT +
Preference number: 5 (lower is better)
Translates to: RNSSPHLPLCSSVSV*ATRCVHPLQMAVTF
Trigger: AAAGGTCACTGCCATCTGGAGTGGATGGACACACCTGGTTGCTCAGACAGATACTGAACTGCACAGTGGGAGATGTGGAGATGAATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS GCA 90 bp ACATGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCTATaGCATTGGGAAGAACAACTTCTGGGAGTGGGTATCATGATGTCG +
Preference number: 5 (lower is better)
Translates to: TCHAHSSPKSNTLHL*HWEEQLLGVGIMMS
Trigger: CGACATCATGATACCCACTCCCAGAAGTTGTTCTTCCCAATGGCATAGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531926.5
CDS-3UTR CAA 90 bp GCAAGAACACACATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTGGTTCCGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: ARTHIALEFSRPVTLLGSVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...GGAACCAAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAATGTGTGTTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
CDS-3UTR CAA 90 bp ACTCGCTGTAGCAGCTACTGCATGCCTCAGTCCAGCAGCAATACAAACAACCTTCAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: TRCSSYCMPQSSSNTNNLQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...AAGGTTGTTTGTATTGCTGCTGGACTGAGGCATGCAGTAGCTGCTACAGCGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530925.5
ENST00000533328.5
CDS-3UTR CAA 90 bp GGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATAC +
Preference number: 5 (lower is better)
Translates to: GLVIRSSALKSLTGFKNGASCPC*LLPQTY
Trigger: GTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGC...GCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CAA 90 bp TGGTTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATAC +
Preference number: 5 (lower is better)
Translates to: WFDGLVIRSSALKSLTGFASCPC*LLPQTY
Trigger: GTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGC...GAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS TCA 90 bp CTATACTTCTCAATGGCCTGGGGAACCACACATCTTCGAGGTCCATaGGGAACTCCTAACTGGCCAAAGGAGTTGGATCCACATGATAGA +
Preference number: 5 (lower is better)
Translates to: LYFSMAWGTTHLRGP*GTPNWPKELDPHDR
Trigger: TCTATCATGTGGATCCAACTCCTTTGGCCAGTTAGGAGTTCCTCATGGACCTCGAAGATGTGTGGTTCCCCAGGCCATTGAGAAGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR CAA 90 bp GCCAAAGAGGGATTTGCAGGGGGTAAAATATGGGATATCCTCTGTGTGACCAAGACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: AKEGFAGGKIWDILCVTKTEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...CTTGGTCACACAGAGGATATCCCATATTTTACCCCCTGCAAATCCCTCTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524716.5
ENST00000533328.5
CDS-3UTR CAA 90 bp CTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAGCTGTGAGCATAATGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSPAAIQTTFSLWSCEHNVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...ATTATGCTCACAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533328.5
CDS-3UTR CAA 90 bp AGTCATTCAGTTGCTGGGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTTAACTGGCCAAAGGAGTaGGATCCACATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: SHSVAGATAHLPYGRGQVNWPKE*DPHDRT
Trigger: AGTTCTATCATGTGGATCCAACTCCTTTGGCCAGTT...AACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCCCAGCAACTGAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524716.5
CDS-3UTR CAA 90 bp CAGGTGTGTCCATCCACTCCAGATGGCAGTGACCTTTTCATTCTGGAAACAATGAGTTGCCCATGCTTGTaGCTTCCCCAAACATACACC +
Preference number: 5 (lower is better)
Translates to: QVCPSTPDGSDLFILETMSCPCL*LPQTYT
Trigger: GGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACT...CATTGTTTCCAGAATGAAAAGGTCACTGCCATCTGGAGTGGATGGACACACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS-3UTR CAA 90 bp TGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCACCTCCAGCATGGTTaGATGGTCTGGTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: WSGHPIISTEVSHRIQKWHLQHG*MVWSSD
Trigger: ATCGGATGACCAGACCATCAAACCATGCTGGAGGTG...CCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532265.5
ENST00000532546.5
CDS TCA 90 bp CTAAGCACCAAATCCACAACAAAACACAACATCCCAGATGCAGGCTaGACAGCAGAAAGGGCTGAGCTTTGGCCTTCCTTCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSTKSTTKHNIPDAG*TAERAELWPSFFWK
Trigger: TTTCCAGAAGAAGGAAGGCCAAAGCTCAGCCCTTTCTGCTGTTCAGCCTGCATCTGGGATGTTGTGTTTTGTTGTGGATTTGGTGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR CAA 90 bp AGTCCCCCATTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTAGTTGCCCATGCTTGTaGCTTCCCCAAACATACACC +
Preference number: 5 (lower is better)
Translates to: SPPFLDQSDWLWVEVSDCSCPCL*LPQTYT
Trigger: GGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACT...ACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAATGGGGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp GTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGAGTTGCCCATGCTTGTaGCTTCCCCAAACATACACC +
Preference number: 5 (lower is better)
Translates to: VIRSSALKSLTGFKNGSMSCPCL*LPQTYT
Trigger: GGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACT...CATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CAA 90 bp TCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACAGCCTCATTAGCCAGTaGCCCATGCTTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SALKSLTGFKNGSMTHEHSLISQ*PMLVAS
Trigger: GGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCT...GTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS CCA 90 bp CATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCTATGCCATTaGGAAGAACAACTTCTGGGAGTGGGTATCATGATGTCGATTTTA +
Preference number: 5 (lower is better)
Translates to: HAHSSPKSNTLHLCH*EEQLLGVGIMMSIL
Trigger: TAAAATCGACATCATGATACCCACTCCCAGAAGTTGTTCTTCCCAATGGCATAGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531926.5
CDS-3UTR CAA 90 bp ACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATCTTGAGTATATCGTGACCAAGCCCCAGTaGCCCATCTTTGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: TGFKNGSMTHEHCDLEYIVTKPQ*PIFVQA
Trigger: GGCCTGAACAAAGATGGGCAACTGGGGCTTGGTCAC...GATATACTCAAGATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CAA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAGTTGCCCATGCTTGTaGCTTCCCCAAACATACACC +
Preference number: 5 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKSCPCL*LPQTYT
Trigger: GGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACT...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CAA 90 bp TTTGATGGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAACACAAGAGACCTCAGTaGCTCCAGTTAAGCAATGCG +
Preference number: 5 (lower is better)
Translates to: FDGLVIRSSALKSLTGFKHKRPQ*LQLSNA
Trigger: CGCATTGCTTAACTGGAGCAACTGAGGTCTCTTGTG...TTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS TCA 90 bp CTGAGCCACAAGAGACCTGTTGCACTGGAACACTCTGAAATGCCATaGGTCTTCTCAGCTGGGAAGACTGCTAAGAATGGTGAATTAATT +
Preference number: 5 (lower is better)
Translates to: LSHKRPVALEHSEMP*VFSAGKTAKNGELI
Trigger: AATTAATTCACCATTCTTAGCAGTCTTCCCAGCTGAGAAGACTCATGGCATTTCAGAGTGTTCCAGTGCAACAGGTCTCTTGTGGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528369.5
CDS GCA 90 bp TCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAGCTTTATaGCCAGGGCCTAAGCACCAAATCCACAACAAAACACAACATCCC +
Preference number: 5 (lower is better)
Translates to: SVQQQYKQPSLYGAL*PGPKHQIHNKTQHP
Trigger: GGGATGTTGTGTTTTGTTGTGGATTTGGTGCTTAGGCCCTGGGCATAAAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS-3UTR CAA 90 bp CTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: LKSLTGFKNGSMTHEHCDTEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...ATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CAA 90 bp CTCAGTCCAGCAGCAATACAAACAACCTTCTCTTTATGGAGCTGTGAGCATAATACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: LSPAAIQTTFSLWSCEHNTEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...ATTATGCTCACAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTGCTGGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533328.5
CDS-3UTR CAA 90 bp TGCCATGCTCATTCCAGCCCCAAGAGTAACACACTCCACCAATTATTGCCAAATAACTGGCCAAAGGAGTaGGATCCACATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: CHAHSSPKSNTLHQLLPNNWPKE*DPHDRT
Trigger: AGTTCTATCATGTGGATCCAACTCCTTTGGCCAGTT...ATTTGGCAATAATTGGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525422.5
ENST00000527494.5
CDS-3UTR CAA 90 bp TCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAAAGTTGCCCATGCTTGTaGCTTCCCCAAACATACACC +
Preference number: 5 (lower is better)
Translates to: SSALKSLTGFKNGSMTHESCPCL*LPQTYT
Trigger: GGTGTATGTTTGGGGAAGCAACAAGCATGGGCAACT...TTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CAA 90 bp TGCAGAGATACAATTATTGCCAAATTATGCTCTGAGCCACAAGAGACCTTGCTAAGCCTCATTAGCCAGTaGCCCATGCTTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: CRDTIIAKLCSEPQETLLSLISQ*PMLVAS
Trigger: GGAAGCAACAAGCATGGGCAACTGGCTAATGAGGCT...TAGCAAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR CAA 90 bp ATTGCTTTAGAATTCTCTAGACCTGTCACTCTGCTTGGTTCCTTTGCTGTGAAAACAGAAGTCATTCAGTaGCTGGGGCAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: IALEFSRPVTLLGSFAVKTEVIQ*LGQQHI
Trigger: GATGTGCTGTTGCCCCAGCAACTGAATGACTTCTGT...TTTCACAGCAAAGGAACCAAGCAGAGTGACAGGTCTAGAGAATTCTAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527494.5
ENST00000530925.5
CDS-3UTR CAA 90 bp ACTTACCTTGCAGAGATACAATTATTGCCAAATTATGCTCTGAGCCACAAGAGAGCCAGTTGCCCATGCTaGTTGCTTCCCCAAACATAC +
Preference number: 5 (lower is better)
Translates to: TYLAEIQLLPNYALSHKRASCPC*LLPQTY
Trigger: GTATGTTTGGGGAAGCAACAAGCATGGGCAACTGGC...TCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS-3UTR CAA 90 bp GGTCTGGTCATCCGATCATCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCGCAGAGATACAATTATaGCCAAATTATGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GLVIRSSALKSLTGFKNGAEIQL*PNYALS
Trigger: GCTCAGAGCATAATTTGGCAATAATTGTATCTCTGC...GCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGATGATCGGATGACCAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS-3UTR CAA 90 bp TCAGCACTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACGAGCCACAAGAGACCTaGCTATTACTCCAAAAGACT +
Preference number: 5 (lower is better)
Translates to: SALKSLTGFKNGSMTHEHEPQET*LLLQKT
Trigger: AGTCTTTTGGAGTAATAGCAAGGTCTCTTGTGGCTC...GTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAGTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS TCA 90 bp AAATTATGCTCTGAGCCACAAGAGACCTACTGGAAGTTCAGAGAATaGAGTGATCAATTAGGACCTGGACATCAGGGAAGACTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KLCSEPQETYWKFRE*SDQLGPGHQGRLSK
Trigger: CTTGGAAAGTCTTCCCTGATGTCCAGGTCCTAATTGATCACTTCATTCTCTGAACTTCCAGTAGGTCTCTTGTGGCTCAGAGCATAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS-3UTR CAA 90 bp ACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATCTTGAGTATATCCAGCCAAAGAGGGATTaGCAGGGGGTAAAATATGGG +
Preference number: 5 (lower is better)
Translates to: TGFKNGSMTHEHCDLEYIQPKRD*QGVKYG
Trigger: CCCATATTTTACCCCCTGCAAATCCCTCTTTGGCTG...GATATACTCAAGATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CAA 90 bp CTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATAACTGGCCAAAGGAGTaGGATCCACATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: LKSLTGFKNGSMTHEHCDNWPKE*DPHDRT
Trigger: AGTTCTATCATGTGGATCCAACTCCTTTGGCCAGTT...ATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS-3UTR CAA 90 bp TTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCCCAGATTGGCTTTGGGTaGAAGTTTCTGATTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FWTSQIGFGLKFLIVFPSQIGFG*KFLIVF
Trigger: AAAGACAATCAGAAACTTCAACCCAAAGCCAATCTG...GGAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp TTTCTGGACCAGTCAGATTGGCTTTGGGTTGAAGTTTCTGATTGTCTTTCCTTCCAGATTGGCTTTGGGTaGAAGTTTCTGATTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FLDQSDWLWVEVSDCLSFQIGFG*KFLIVF
Trigger: AAAGACAATCAGAAACTTCAACCCAAAGCCAATCTG...GAAGGAAAGACAATCAGAAACTTCAACCCAAAGCCAATCTGACTGGTCCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525422.5
ENST00000527494.5
ENST00000528200.5
CDS-3UTR CAA 90 bp CTGAAGTCTCTCACAGGATTCAAAAATGGCTCCATGACACATGAACACTGTGATGCAGAGATACAATTATaGCCAAATTATGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LKSLTGFKNGSMTHEHCDAEIQL*PNYALS
Trigger: GCTCAGAGCATAATTTGGCAATAATTGTATCTCTGC...ATCACAGTGTTCATGTGTCATGGAGCCATTTTTGAATCCTGTGAGAGACTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532265.5
ENST00000532546.5
ENST00000533241.1
CDS GCA 72 bp ATTCGGGCTGGAGGGCTCTCGCGGAACCAGACGCTCTaGCCCGAGGCAGGTTCTTCCCGCGGCGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: IRAGGLSRNQTL*PEAGSSRGATA
Trigger: GGCTGTGGCGCCGCGGGAAGAACCTGCCTCGGGGCAGAGCGTCTGGTTCCGCGAGAGCCCTCCAGCCCGAAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529728.5
CDS CCA 72 bp GAGCCCTCCGCGCTGTCTTCCAGGCGCTATTCGGGCTaGAGGGCTCTCGCGGAACCAGACGCTCTGCCCCGA +
Preference number: 6 (lower is better)
Translates to: EPSALSSRRYSG*RALAEPDALPR
Trigger: TCGGGGCAGAGCGTCTGGTTCCGCGAGAGCCCTCCAGCCCGAATAGCGCCTGGAAGACAGCGCGGAGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529728.5
CDS TCA 72 bp TGTTTGTTTTTGAAGACACCTCAGCCGCCCAGCCCCTaGACTGCCCACGCCGCGGCCAGCAGCTCCCACATC +
Preference number: 6 (lower is better)
Translates to: CLFLKTPQPPSP*TAHAAASSSHI
Trigger: GATGTGGGAGCTGCTGGCCGCGGCGTGGGCAGTTCAGGGGCTGGGCGGCTGAGGTGTCTTCAAAAACAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532212.5
ENST00000532389.5
CDS CAA 72 bp GGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACCCTCAGCCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GQQHIFLMAEAK*PIAICTLSRPA
Trigger: GGCTGGGCGGCTGAGGGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527494.5
ENST00000530925.5
ENST00000532265.5
ENST00000533328.5
CDS CAA 72 bp GGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACCCCAGGCGAAGAGCGC +
Preference number: 6 (lower is better)
Translates to: GQQHIFLMAEAK*PIAICTPGEER
Trigger: GCGCTCTTCGCCTGGGGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265965.10
ENST00000525422.5
ENST00000528200.5
CDS GCA 72 bp TGCCCCTCAGCCTGTGAGTTCTTTAATATGCTCAAATaGCACTTCCCGGGCAGGGAGGCCAGCTCAGGTACC +
Preference number: 6 (lower is better)
Translates to: CPSACEFFNMLK*HFPGREASSGT
Trigger: GGTACCTGAGCTGGCCTCCCTGCCCGGGAAGTGGCATTTGAGCATATTAAAGAACTCACAGGCTGAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525168.1
CDS GCA 72 bp TCCACAAGTGGACTCACGAAGCACCTGAGCCTCAGCTaGCACAGCCAATTAGTGCTGTCCTGTAGCAGCTAC +
Preference number: 6 (lower is better)
Translates to: STSGLTKHLSLS*HSQLVLSCSSY
Trigger: GTAGCTGCTACAGGACAGCACTAATTGGCTGTGGCAGCTGAGGCTCAGGTGCTTCGTGAGTCCACTTGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527494.5
CDS CCA 72 bp GCCCCAAGAGTAACACACTCCACAGTTCCATGTGGTTaGGGAGGCCTCACAATCGTGGCAGAAGACAAGGAG +
Preference number: 6 (lower is better)
Translates to: APRVTHSTVPCG*GGLTIVAEDKE
Trigger: CTCCTTGTCTTCTGCCACGATTGTGAGGCCTCCCCAACCACATGGAACTGTGGAGTGTGTTACTCTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS CCA 72 bp TCCAGCCCCAAGAGTAACACACTCCACAGTTCCATGTaGTTGGGGAGGCCTCACAATCGTGGCAGAAGACAA +
Preference number: 6 (lower is better)
Translates to: SSPKSNTLHSSM*LGRPHNRGRRQ
Trigger: TTGTCTTCTGCCACGATTGTGAGGCCTCCCCAACCACATGGAACTGTGGAGTGTGTTACTCTTGGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS CAA 72 bp GGGCAACAGCACATCTTCCTTATGGCCGAGGCCAAGTaGCCCATAGCTATTTGCACCCTACTCCTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: GQQHIFLMAEAK*PIAICTLLLAG
Trigger: ACCAGCTAGGAGTAGGGTGCAAATAGCTATGGGCAACTTGGCCTCGGCCATAAGGAAGATGTGCTGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530613.5
ENST00000530951.2
ENST00000532212.5
CDS CAA 72 bp AGCCCCAAGAGTAACACACTCCACAGTTCCATGTGGTaGGGGAGGCCTCACAATCGTGGCAGAAGACAAGGA +
Preference number: 6 (lower is better)
Translates to: SPKSNTLHSSMW*GRPHNRGRRQG
Trigger: TCCTTGTCTTCTGCCACGATTGTGAGGCCTCCCCAACCACATGGAACTGTGGAGTGTGTTACTCTTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS CAA 90 bp GCTCATTCCAGCCCCAAGAGTAACACACTCCACAGTTCCATGTGGTaGGGGAGGCCTCACAATCGTGGCAGAAGACAAGGAGAAGCAAGT +
Preference number: 6 (lower is better)
Translates to: AHSSPKSNTLHSSMW*GRPHNRGRRQGEAS
Trigger: ACTTGCTTCTCCTTGTCTTCTGCCACGATTGTGAGGCCTCCCCAACCACATGGAACTGTGGAGTGTGTTACTCTTGGGGCTGGAATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531299.5
CDS TCA 72 bp TCTCCACATCTCCCACTGTGCAGTTCAGTATCTGTCTaGGCAACCAGGTGTGTCCATCCACTCCAGATGGCA +
Preference number: 6 (lower is better)
Translates to: SPHLPLCSSVSV*ATRCVHPLQMA
Trigger: TGCCATCTGGAGTGGATGGACACACCTGGTTGCTCAGACAGATACTGAACTGCACAGTGGGAGATGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS GCA 72 bp GCCACAAGAGACCTGTTGCACTGGAACACTCTGAAATaGCATGAGTCTTCTCAGCTGGGAAGACTGCTAAGA +
Preference number: 6 (lower is better)
Translates to: ATRDLLHWNTLK*HESSQLGRLLR
Trigger: TCTTAGCAGTCTTCCCAGCTGAGAAGACTCATGGCATTTCAGAGTGTTCCAGTGCAACAGGTCTCTTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528369.5
CDS CCA 72 bp ACAGCAGAAAGGGCTGAGCTTTGGCCTTCCTTCTTCTaGAAACTATACTTCTCAATGGCCTGGGGAACCACA +
Preference number: 6 (lower is better)
Translates to: TAERAELWPSFF*KLYFSMAWGTT
Trigger: TGTGGTTCCCCAGGCCATTGAGAAGTATAGTTTCCAGAAGAAGGAAGGCCAAAGCTCAGCCCTTTCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS TCA 72 bp CAACATCCCAGATGCAGGCTGAACAGCAGAAAGGGCTaGGCTTTGGCCTTCCTTCTTCTGGAAACTATACTT +
Preference number: 6 (lower is better)
Translates to: QHPRCRLNSRKG*ALAFLLLETIL
Trigger: AAGTATAGTTTCCAGAAGAAGGAAGGCCAAAGCTCAGCCCTTTCTGCTGTTCAGCCTGCATCTGGGATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS TCA 72 bp AAGAGACCTGTTGCACTGGAACACTCTGAAATGCCATaGGTCTTCTCAGCTGGGAAGACTGCTAAGAATGGT +
Preference number: 6 (lower is better)
Translates to: KRPVALEHSEMP*VFSAGKTAKNG
Trigger: ACCATTCTTAGCAGTCTTCCCAGCTGAGAAGACTCATGGCATTTCAGAGTGTTCCAGTGCAACAGGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528369.5
CDS CCA 72 bp GCTCTGAGCCACAAGAGACCTGTTAATGAAGCTGAGTaGTCTGAGCCAGCAAGAACACACATTGCTTTAGAA +
Preference number: 6 (lower is better)
Translates to: ALSHKRPVNEAE*SEPARTHIALE
Trigger: TTCTAAAGCAATGTGTGTTCTTGCTGGCTCAGACCACTCAGCTTCATTAACAGGTCTCTTGTGGCTCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525920.5
CDS TCA 72 bp GCCACAAGAGACCTACTGGAAGTTCAGAGAATGAAGTaGTCAATTAGGACCTGGACATCAGGGAAGACTTTC +
Preference number: 6 (lower is better)
Translates to: ATRDLLEVQRMK*SIRTWTSGKTF
Trigger: GAAAGTCTTCCCTGATGTCCAGGTCCTAATTGATCACTTCATTCTCTGAACTTCCAGTAGGTCTCTTGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525422.5
CDS TCA 72 bp GTAACACACTCCACCAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTTGCACTGGAACACTCTG +
Preference number: 6 (lower is better)
Translates to: VTHSTNYCQIML*ATRDLLHWNTL
Trigger: CAGAGTGTTCCAGTGCAACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGGTGGAGTGTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528369.5
CDS TCA 72 bp GTAACACACTCCACCAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTCACTCTGCTTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: VTHSTNYCQIML*ATRDLSLCLVP
Trigger: AGGAACCAAGCAGAGTGACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGGTGGAGTGTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529440.5
CDS TCA 72 bp ACCTTGCAGAGATACAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTCTGAGCAACCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: TLQRYNYCQIML*ATRDLSEQPGV
Trigger: CACACCTGGTTGCTCAGACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532265.5
CDS TCA 72 bp GTAACACACTCCACCAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTGTTAATGAAGCTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: VTHSTNYCQIML*ATRDLLMKLSG
Trigger: ACCACTCAGCTTCATTAACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGGTGGAGTGTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525920.5
CDS GCA 72 bp CAGCAATACAAACAACCTTCTCTTTATGGAGCTTTATaGCCAGGGCCTAAGCACCAAATCCACAACAAAACA +
Preference number: 6 (lower is better)
Translates to: QQYKQPSLYGAL*PGPKHQIHNKT
Trigger: TGTTTTGTTGTGGATTTGGTGCTTAGGCCCTGGGCATAAAGCTCCATAAAGAGAAGGTTGTTTGTATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530925.5
CDS CAA 90 bp CAGCAAAACTGGGATAATAATACTTACCTTGCAGAGATACAATTATaGCCAAATTATGCTCTGAGCCACAAGAGACCTCAGTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QQNWDNNTYLAEIQL*PNYALSHKRPQLLQ
Trigger: CTGGAGCAACTGAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCAGTTTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS TCA 72 bp ACCTTGCAGAGATACAATTATTGCCAAATTATGCTCTaGGCCACAAGAGACCTTGCTATTACTCCAAAAGAC +
Preference number: 6 (lower is better)
Translates to: TLQRYNYCQIML*ATRDLAITPKD
Trigger: GTCTTTTGGAGTAATAGCAAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532546.5
CDS CAA 72 bp TGGGATAATAATACTTACCTTGCAGAGATACAATTATaGCCAAATTATGCTCTGAGCCACAAGAGACCTCAG +
Preference number: 6 (lower is better)
Translates to: WDNNTYLAEIQL*PNYALSHKRPQ
Trigger: CTGAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533241.1
CDS CAA 72 bp TGGGATAATAATACTTACCTTGCAGAGATACAATTATaGCCAAATTATGCTCTGAGCCACAAGAGACCTGTC +
Preference number: 6 (lower is better)
Translates to: WDNNTYLAEIQL*PNYALSHKRPV
Trigger: GACAGGTCTCTTGTGGCTCAGAGCATAATTTGGCAATAATTGTATCTCTGCAAGGTAAGTATTATTATCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532265.5