RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000140264

Ensembl transcript IDs: ENST00000249786.9, ENST00000381359.5, ENST00000402131.5, ENST00000403425.5, ENST00000409291.5, ENST00000409617.6, ENST00000409646.5, ENST00000409960.6, ENST00000430901.1, ENST00000445816.5, ENST00000448830.2, ENST00000474290.1, ENST00000475927.5, ENST00000486144.1, ENST00000630046.2, ENST00000674451.1

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCCCGGGGAGGAGGCGGGGCTGGCCCTGGGCCACACCTTCTTTCTaGTCCAGTTCTAGAAGCTTCAGGGAGGAAGGCGGTTCGTCTCTC +
Preference number: 1 (lower is better)
Translates to: RPGRRRGWPWATPSF*SSSRSFREEGGSSL
Trigger: GAGAGACGAACCGCCTTCCTCCCTGAAGCTTCTAGAACTGGAGCAGAAAGAAGGTGTGGCCCAGGGCCAGCCCCGCCTCCTCCCCGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CCA 90 bp GCTGCTCTCATCTGCCTTCCATCTGGTGGACCTAAGCCTAATCCCTaGGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCCCGGCAC +
Preference number: 1 (lower is better)
Translates to: AALICLPSGGPKPNP*DKDGGCQGRPQPRH
Trigger: GTGCCGGGGCTGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGATTAGGCTTAGGTCCACCAGATGGAAGGCAGATGAGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR GCA 90 bp GCCAGCTGCTGCCACTCTAGGTGGCCCTCTCTCACCGCATCCACTTaGAGCCGCCTGTTCTACATCCTCCTCCATGTGGGGGCCTCAGCA +
Preference number: 1 (lower is better)
Translates to: ASCCHSRWPSLTAST*SRLFYILLHVGASA
Trigger: TGCTGAGGCCCCCACATGGAGGAGGATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAGAGAGGGCCACCTAGAGTGGCAGCAGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR GCA 90 bp AGTCTCCACCTCGCTGCCTTGCATCTGCTCTACTCCCAGGTGTGCTaGTGTGGGCCTGCTCCTTGTGCCAGCTGCTGCCACTCTAGGTGG +
Preference number: 1 (lower is better)
Translates to: SLHLAALHLLYSQVC*CGPAPCASCCHSRW
Trigger: CCACCTAGAGTGGCAGCAGCTGGCACAAGGAGCAGGCCCACAGCAGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGAGGTGGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR GCA 90 bp GCAAGTCTCCACCTCGCTGCCTTGCATCTGCTCTACTCCCAGGTGTaGTGCTGTGGGCCTGCTCCTTGTGCCAGCTGCTGCCACTCTAGG +
Preference number: 1 (lower is better)
Translates to: ASLHLAALHLLYSQV*CCGPAPCASCCHSR
Trigger: CCTAGAGTGGCAGCAGCTGGCACAAGGAGCAGGCCCACAGCAGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGAGGTGGAGACTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR GCA 90 bp GGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGACCGGGTaGTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAA +
Preference number: 1 (lower is better)
Translates to: GQCSLPDVSILPGTG*SAPTQWQSNGLRTE
Trigger: TTCTGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR CCA 90 bp CCCTTCTGTCAGGTGAGAGGGTGCGAAGGGGAGAGTGGCCGAAGCTaGGGAGGAAGACGTGCAGAAGCCAATAAAAACGACAGGCCTCTT +
Preference number: 1 (lower is better)
Translates to: PFCQVRGCEGESGRS*GGRRAEANKNDRPL
Trigger: AAGAGGCCTGTCGTTTTTATTGGCTTCTGCACGTCTTCCTCCCCAGCTTCGGCCACTCTCCCCTTCGCACCCTCTCACCTGACAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR TCA 90 bp GCTCAAGAGCCTAACACCCAAATCAGCAGCTCAAAGAACCACCGCTaGTCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGG +
Preference number: 1 (lower is better)
Translates to: AQEPNTQISSSKNHR*SQQTVWHQPFPGSW
Trigger: CCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTTGGGTGTTAGGCTCTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 90 bp GCAGAACTGGAAAAGACCTTCATCAAGGGTAGCTGGGCCACCTTCTaGGTCAAGGTTGCCTCATGCTGGGCCTGCGTACTCCTCTATCTG +
Preference number: 1 (lower is better)
Translates to: AELEKTFIKGSWATF*VKVASCWACVLLYL
Trigger: CAGATAGAGGAGTACGCAGGCCCAGCATGAGGCAACCTTGACCCAGAAGGTGGCCCAGCTACCCTTGATGAAGGTCTTTTCCAGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 90 bp CTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTaGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGAC +
Preference number: 1 (lower is better)
Translates to: LRTKLLHRAFAFTAT*RSVFSSGRLHSARD
Trigger: GTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR TCA 90 bp AACTGCCCCCTAATCTGGAGAGAACAGCCTGAGTGGCCGCAGTGTTaGGGCCCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTAC +
Preference number: 1 (lower is better)
Translates to: NCPLIWREQPEWPQC*GPKDKAPSQGICIY
Trigger: GTAAATGCAAATGCCCTGTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTCTCCAGATTAGGGGGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR CCA 90 bp GTGGTCAAACACAGTCTAATGTGCTGGGCAGAGTGTCTGACTCACTaGAGCTACTGTTACATCTGCATCCCAGCTCAAGAGCCTAACACC +
Preference number: 1 (lower is better)
Translates to: VVKHSLMCWAECLTH*SYCYICIPAQEPNT
Trigger: GGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGACACTCTGCCCAGCACATTAGACTGTGTTTGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR TCA 90 bp ATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTaGATACTGTTGAGAGCTAGTCAGATGAATGAGACTGGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: MPFEYSNSAETPDVP*ILLRASQMNETGLP
Trigger: TGGCAGGCCAGTCTCATTCATCTGACTAGCTCTCAACAGTATTCAAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR CCA 90 bp GATATCTCAAGCCTGCTTATAATGAAAGCCCTACTAAGTTGTCAGTaGGCGGCAATCCCAAATGGCTGGAATCAGCTTGAAACAGAACCT +
Preference number: 1 (lower is better)
Translates to: DISSLLIMKALLSCQ*AAIPNGWNQLETEP
Trigger: AGGTTCTGTTTCAAGCTGATTCCAGCCATTTGGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTCATTATAAGCAGGCTTGAGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409646.5
ENST00000448830.2
3UTR TCA 90 bp ATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATATTTGGTaGGGAGGTAGAACAGGTCTAAAAGCTAAGGCCCTTCATATTCTC +
Preference number: 1 (lower is better)
Translates to: IQGHSRHTWVCHYIW*GGRTGLKAKALHIL
Trigger: GAGAATATGAAGGGCCTTAGCTTTTAGACCTGTTCTACCTCCTCACCAAATATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 90 bp CATTCACTCTTAGGCCAACTCCATCCTAGAGATGGTGTTCAAGGGTaGGGAACAAAAATCACAGAAAAGAAGTCTCTATGGTTCTTAGAG +
Preference number: 1 (lower is better)
Translates to: HSLLGQLHPRDGVQG*GTKITEKKSLWFLE
Trigger: CTCTAAGAACCATAGAGACTTCTTTTCTGTGATTTTTGTTCCCCACCCTTGAACACCATCTCTAGGATGGAGTTGGCCTAAGAGTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR GCA 90 bp AATGGAGAAATCGAGGCACAAAAGATTAAACATCTTACCAAAGTCTaGACAGCCACTTATATGCTGGAGCTAGAATTTGAACCCAGGTGT +
Preference number: 1 (lower is better)
Translates to: NGEIEAQKIKHLTKV*TATYMLELEFEPRC
Trigger: ACACCTGGGTTCAAATTCTAGCTCCAGCATATAAGTGGCTGTGCAGACTTTGGTAAGATGTTTAATCTTTTGTGCCTCGATTTCTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 90 bp GCATGTTGTAGGTACCAAAATTCTAACTCAAGGTGGCCTATGAACTaGGTTCATAACCTACATCTATCTATATATATAGTGGCTCCTAGG +
Preference number: 1 (lower is better)
Translates to: ACCRYQNSNSRWPMN*VHNLHLSIYIVAPR
Trigger: CCTAGGAGCCACTATATATATAGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTGGTACCTACAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR TCA 90 bp TTAGGTAGCATCTGGATTTATTCCATGACCAAATACAGATGTTTTTaGGAAGACCAAGGTCTTCTCACATCCTTTAAATGTCCCACTGGA +
Preference number: 1 (lower is better)
Translates to: LGSIWIYSMTKYRCF*EDQGLLTSFKCPTG
Trigger: TCCAGTGGGACATTTAAAGGATGTGAGAAGACCTTGGTCTTCTCAAAAACATCTGTATTTGGTCATGGAATAAATCCAGATGCTACCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR GCA 90 bp AATCACAGAAAAGAAGTCTCTATGGTTCTTAGAGGATTCCTCTACTaGATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGC +
Preference number: 1 (lower is better)
Translates to: NHRKEVSMVLRGFLY*ISGVLVWLSLYNKG
Trigger: GCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAGAGACTTCTTTTCTGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR CCA 90 bp ATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTaGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACTT +
Preference number: 1 (lower is better)
Translates to: MVLRGFLYCISGVLV*LSLYNKGFFCDVSL
Trigger: AAGTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR-3UTR GCA 90 bp TCCCTGGGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCCCGGCACCTCCCTACTCCCAGGTGTGCTaGTGTGGGCCTGCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: SLGQGWWVPRPAPAPAPPYSQVC*CGPAPC
Trigger: ACAAGGAGCAGGCCCACAGCAGCACACCTGGGAGTA...GGGAGGTGCCGGGGCTGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR GCA 90 bp TCCCTGGGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCCCGGCACCTCCCGCCTCAGCAATCTGCTaGCTCCTGTTTGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SLGQGWWVPRPAPAPAPPASAIC*LLFGLS
Trigger: AGAGAGGCCAAACAGGAGGCAGCAGATTGCTGAGGC...GGGAGGTGCCGGGGCTGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp TCCCTGGGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCCCGGCACCTCCCCTACTAAGTTGTCAGTaGGCGGCAATCCCAAATGGC +
Preference number: 2 (lower is better)
Translates to: SLGQGWWVPRPAPAPAPPLLSCQ*AAIPNG
Trigger: GCCATTTGGGATTGCCGCCCACTGACAACTTAGTAG...GGGAGGTGCCGGGGCTGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp GACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCGTGCGAAGGGGAGAGTaGCCGAAGCTGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: DRVLSPNTVAVQWAEDRSVRRGE*PKLGRK
Trigger: CTTCCTCCCCAGCTTCGGCCACTCTCCCCTTCGCAC...GCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTGAGCACCCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR TCA 90 bp GGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGACCGGGTGCTCAGTCCCTTCTGTCAGGTaGGAGGGTGCGAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GGQCSLPDVSILPGTGCSVPSVR*EGAKGR
Trigger: TCTCCCCTTCGCACCCTCTCACCTGACAGAAGGGAC...TGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR GCA 90 bp GAGAACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACCTGCCCGGGACCGGGTaGTCAGCCCCAACACAGTGG +
Preference number: 2 (lower is better)
Translates to: ENSLSGRSVEALRTKLLHLPGTG*SAPTQW
Trigger: CCACTGTGTTGGGGCTGAGCACCCGGTCCCGGGCAG...GTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR CCA 90 bp TCTGGAGAGAACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTGGGACAAGGATGGTaGGTGCCAAGGCCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SGENSLSGRSVEALRTKLLGQGW*VPRPAP
Trigger: TGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAG...GAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR TCA 90 bp GGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGCCCCCGAGAAAGTGAACGCTTaGCAGCAGCTGACCACGGGA +
Preference number: 2 (lower is better)
Translates to: GLRTPLSGAVTGTTLLAPEKVNA*QQLTTG
Trigger: TCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTC...GGGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR TCA 90 bp TTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGCTGGAGAGAACAGCCTaGGTGGCCGCAGTGTTGAGG +
Preference number: 2 (lower is better)
Translates to: LPQPGGQCSLPDVSILPGLERTA*VAAVLR
Trigger: CCTCAACACTGCGGCCACTCAGGCTGTTCTCTCCAG...CCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR CCA 90 bp AACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGGTGCGAAGGGGAGAGTaGCCGAAGCTGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: NSLSGRSVEALRTKLLHRVRRGE*PKLGRK
Trigger: CTTCCTCCCCAGCTTCGGCCACTCTCCCCTTCGCAC...CCTGTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR TCA 90 bp GCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCACGCTTGACAGCAGCTaGCCACGGGAAGTCGGTGAG +
Preference number: 2 (lower is better)
Translates to: AQNHRTNQGIEERSTEATTLDSS*PREVGE
Trigger: CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGT...GGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
3UTR-3UTR CCA 90 bp GACAAAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTAGGCGGGGCTGGCCCTaGGCCACACCTTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: DKAPSQGICIYRNLEVSVRRGWP*ATPSFC
Trigger: GCAGAAAGAAGGTGTGGCCCAGGGCCAGCCCCGCCT...AACACTGACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp AACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGACATCCTCCTCCATGTaGGGGCCTCAGCAATCTGCT +
Preference number: 2 (lower is better)
Translates to: NSLSGRSVEALRTKLLHRTSSSM*GPQQSA
Trigger: AGCAGATTGCTGAGGCCCCCACATGGAGGAGGATGT...CCTGTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CAA 90 bp TACATTAACGTATGCCTTTCCTCAGCAAGTCTCCACCTCGCTGCCTaGCATCTGCTCTACTCCCAGGTGTGCTGCTGTGGGCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: YINVCLSSASLHLAA*HLLYSQVCCCGPAP
Trigger: AGGAGCAGGCCCACAGCAGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGAGGTGGAGACTTGCTGAGGAAAGGCATACGTTAATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR TCA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAAACGCTTGACAGCAGCTaGCCACGGGAAGTCGGTGAG +
Preference number: 2 (lower is better)
Translates to: LQKPSLCFCCPETVEADKTLDSS*PREVGE
Trigger: CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGT...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR TCA 90 bp AAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCACCGACTTCCGGCAACTaGCACAGCTTCCGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: KLSWRHMPFEYSNSAETPPTSGN*HSFRPG
Trigger: CCCCGGGCGGAAGCTGTGTCAGTTGCCGGAAGTCGG...TGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR GCA 90 bp GAGAACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACACTGCTGCTCTCATCTaGCTTCCATCTGGTGGACCT +
Preference number: 2 (lower is better)
Translates to: ENSLSGRSVEALRTKLLHTAALI*LPSGGP
Trigger: AGGTCCACCAGATGGAAGGCAGATGAGAGCAGCAGT...GTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGGCATTTACCGCAACCTaGAGGTCAGTGTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LPQPGGQCSLPDVSILPGAFTAT*RSVFSS
Trigger: GGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGC...CCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR GCA 90 bp TCTGGAGAGAACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCGACAGAAGCAACTGCTaGTCTCATCTGCCTTCCATC +
Preference number: 2 (lower is better)
Translates to: SGENSLSGRSVEALRTKLDRSNC*SHLPSI
Trigger: GATGGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTC...GAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR GCA 90 bp AAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCACGGACGTCTCCATTCTaGCCGGGACCGGGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: KLSWRHMPFEYSNSAETPRTSPF*PGPGAQ
Trigger: CTGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCG...TGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp CCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCCTGAAGTCCCAGCAGACAGTGTaGCACCAGCCCTTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: PLPTGSGKMEWALDTLLKSQQTV*HQPFPG
Trigger: GCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGA...CTTCAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR GCA 90 bp TCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTAAATCTCTCCCGCCATGTTTCCCTTGTGCCAGCTGCTaGCACTCTAGGTGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SFWFVAPGIICKSLPPCFPCASC*HSRWPS
Trigger: AGAGGGCCACCTAGAGTGGCAGCAGCTGGCACAAGG...GAAACATGGCGGGAGAGATTTACAGATTATACCTGGGGCAACGAACCAGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAAGCGTACTCCTCTATCTaGGGCTGTTACTGGCACCAC +
Preference number: 2 (lower is better)
Translates to: LQKPSLCFCCPETVEADKAYSSI*GCYWHH
Trigger: GTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGC...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CCA 90 bp AGGCCTCTTTTCTCCTCTAATGTCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTGCTGCCACTCTAGGTaGCCCTCTCTCACCGCATCC +
Preference number: 2 (lower is better)
Translates to: RPLFSSNVVLVRCPRYNLCCHSR*PSLTAS
Trigger: GGATGCGGTGAGAGAGGGCCACCTAGAGTGGCAGCA...CAGATTATACCTGGGGCAACGAACCAGAACGACATTAGAGGAGAAAAGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR GCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGGCCTCATGCTGGGCCTaGGTACTCCTCTATCTGGGG +
Preference number: 2 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWASCWA*VLLYLG
Trigger: CCCCAGATAGAGGAGTACGCAGGCCCAGCATGAGGC...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR GCA 90 bp TCTGTAAATCTCTCCCGCCATGTTTCCAGCCCCAGGTGTTTAGGTCGAGAGAAACTCACCGCATCCACTTaGAGCCGCCTGTTCTACATC +
Preference number: 2 (lower is better)
Translates to: SVNLSRHVSSPRCLGREKLTAST*SRLFYI
Trigger: GATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAG...TTTCTCTCGACCTAAACACCTGGGGCTGGAAACATGGCGGGAGAGATTTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR GCA 90 bp TCTCCTCTAATGTCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTAAATCTCTCGCTCCTTGTGCCAGCTaGTGCCACTCTAGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: SPLMSFWFVAPGIICKSLAPCAS*CHSRWP
Trigger: GGGCCACCTAGAGTGGCAGCAGCTGGCACAAGGAGC...GAGAGATTTACAGATTATACCTGGGGCAACGAACCAGAACGACATTAGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGACAGTGGCAGTCCAATaGGCTGAGGACAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: LHLPQPGGQCSLPDVSILTVAVQ*AEDRSN
Trigger: GTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGT...CAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR TCA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGACCGACTTCCGGCAACTaGCACAGCTTCCGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRPTSGN*HSFRPG
Trigger: CCCCGGGCGGAAGCTGTGTCAGTTGCCGGAAGTCGG...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR GCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGCTTCTGGGTCAAGGTTaGCTCATGCTGGGCCTGCGT +
Preference number: 2 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWLLGQG*LMLGLR
Trigger: ACGCAGGCCCAGCATGAGGCAACCTTGACCCAGAAG...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CCA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAACACAGTCTAATGTGCTaGGCAGAGTGTCTGACTCAC +
Preference number: 2 (lower is better)
Translates to: LQKPSLCFCCPETVEADKHSLMC*AECLTH
Trigger: GTGAGTCAGACACTCTGCCCAGCACATTAGACTGTG...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CAA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTaGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGCAGGATTTTT +
Preference number: 2 (lower is better)
Translates to: NHPHSMRNDRRESER*TAADHGKSVSSRIF
Trigger: AAAAATCCTGCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
3UTR-3UTR TCA 90 bp GCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCACCACCCTCATTCCATaGGGAATGACAGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: AQNHRTNQGIEERSTEATTTLIP*GMTEEK
Trigger: TTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGT...GGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
3UTR-3UTR CCA 90 bp CGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCCCTCTAATGTCGTTCTaGTTCGTTGCCCCAGGTATA +
Preference number: 2 (lower is better)
Translates to: RSVEALRTKLLHRAFAFTPLMSF*FVAPGI
Trigger: TATACCTGGGGCAACGAACCAGAACGACATTAGAGG...GGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR GCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATGTCAAGGTTGCCTCATaGTGGGCCTGCGTACTCCTC +
Preference number: 2 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYVKVAS*WACVLL
Trigger: GAGGAGTACGCAGGCCCAGCATGAGGCAACCTTGAC...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATAGCTGGGCCACCTTCTaGGTCAAGGTTGCCTCATGC +
Preference number: 2 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYSWATF*VKVASC
Trigger: GCATGAGGCAACCTTGACCCAGAAGGTGGCCCAGCT...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGCGGGGCTGGCCCTaGGCCACACCTTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMRRGWP*ATPSFC
Trigger: GCAGAAAGAAGGTGTGGCCCAGGGCCAGCCCCGCCT...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR CCA 90 bp GCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATGGGAAGGGGAAATTTTaGAATTCAACCTCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: AFAFTATWRSVFSSGRLHGKGKF*NSTSWV
Trigger: AACCCAGGAGGTTGAATTCCAAAATTTCCCCTTCCC...ATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CAA 90 bp ACACCCTCACATCTTTTAAGACCATTCCAAAACCTGCGTTCTGTTTaGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAG +
Preference number: 2 (lower is better)
Translates to: TPSHLLRPFQNLRSV*QKPSLCFCCPETVE
Trigger: CTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAAAACAGAACGCAGGTTTTGGAATGGTCTTAAAAGATGTGAGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR TCA 90 bp GAAGACGTGCAGAAGCCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCGTGGCTGGAATCAGCTTaGAACAGAACCTGTTTGGCC +
Preference number: 2 (lower is better)
Translates to: EDVQKPIKTTGLFSPLMSWLESA*NRTCLA
Trigger: GGCCAAACAGGTTCTGTTTCAAGCTGATTCCAGCCA...CGACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGGCTTCTGCACGTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409646.5
3UTR-3UTR GCA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGATTGCCCAGGCTAGAGTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRLPRLE*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCACTCTAGCCTGGGCAA...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGGCAATCCCAAATGGCTaGAATCAGCTTGAAACAGAA +
Preference number: 2 (lower is better)
Translates to: LHLPQPGGQCSLPDVSILAIPNG*NQLETE
Trigger: TTCTGTTTCAAGCTGATTCCAGCCATTTGGGATTGC...CAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp AAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCACTCCAATCACAGACATaGCCGTCTCCAGATTGGAAC +
Preference number: 2 (lower is better)
Translates to: KLSWRHMPFEYSNSAETPLQSQT*PSPDWN
Trigger: GTTCCAATCTGGAGACGGCCATGTCTGTGATTGGAG...TGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR TCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGAGCAGACGAACAAACTaGGGGGAAGGAAGCACAAAA +
Preference number: 2 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWSRRTN*GEGSTK
Trigger: TTTTGTGCTTCCTTCCCCTCAGTTTGTTCGTCTGCT...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445816.5
3UTR-3UTR GCA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGATTGCCCAGTCTGGAGTaGAGTGGCGCGATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRLPSLE*SGAISA
Trigger: AGCAGAGATCGCGCCACTGCACTCCAGACTGGGCAA...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR GCA 90 bp ACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGAATACGAGGACAGAAGCAACTaGTGCTCTCATCTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: TCHLSTVTLLRLQMYLEYEDRSN*CSHLPS
Trigger: GGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTCCTC...GTATTCAAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGACTCGGCTCTGCCCTTaGAGAAAGGAAAATAAGGAG +
Preference number: 2 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWTRLCP*RKENKE
Trigger: CTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGT...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CCA 90 bp ATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACAGTGGCAGTCCAATaGGCTGAGGACAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: IHKLSWRHMPFEYSNSAETVAVQ*AEDRSN
Trigger: GTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGT...CTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp GACAAAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTTGGAATTCAACCTCCTaGGTTAACCTCACACATACA +
Preference number: 2 (lower is better)
Translates to: DKAPSQGICIYRNLEVSVWNSTS*VNLTHT
Trigger: TGTATGTGTGAGGTTAACCCAGGAGGTTGAATTCCA...AACACTGACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR TCA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGACCACCCTCATTCCATaGGGAATGACAGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKTTLIP*GMTEEK
Trigger: TTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGT...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR TCA 90 bp AGATACTCTCCTGAAGAGCTAGCTATTTTAAGGAAAGAGCAATTCAAGGCCATTAAGACCAACAGGGACTaGAGACTCGGCTCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: RYSPEELAILRKEQFKAIKTNRD*RLGSAL
Trigger: AAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTT...AATGGCCTTGAATTGCTCTTTCCTTAAAATAGCTAGCTCTTCAGGAGAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR TCA 90 bp TGGTTACCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCTGCCATTATATTTGGTaGGGAGGTAGAACAGGTCTA +
Preference number: 2 (lower is better)
Translates to: WLPLPTGSGKMEWALDTLCHYIW*GGRTGL
Trigger: TAGACCTGTTCTACCTCCTCACCAAATATAATGGCA...GAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGGTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR GCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGTCGCTGCCTTGCATCTaGTCTACTCCCAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMSLPCI*STPRCA
Trigger: AGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGA...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCGATGGTGTTCAAGGGTaGGGAACAAAAATCACAGAA +
Preference number: 2 (lower is better)
Translates to: LILILRSREAGRQNHPHSDGVQG*GTKITE
Trigger: TTCTGTGATTTTTGTTCCCCACCCTTGAACACCATC...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
3UTR-3UTR GCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGCCACAGACAGGCACATaGCACCATGCCTGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMPQTGT*HHAWLF
Trigger: AAAAAGCCAGGCATGGTGGCATGTGCCTGTCTGTGG...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATGTCCTTTTCACAAACTaGGGTTCCCCTGACATTGTA +
Preference number: 2 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYVLFTN*GSPDIV
Trigger: TACAATGTCAGGGGAACCCCAGTTTGTGAAAAGGAC...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CCA 90 bp AGATACTCTCCTGAAGAGCTAGCTATTTTAAGGAAAGAGCAATTCAAGGCCATTGAGTGTCTGACTCACTaGAGCTACTGTTACATCTGC +
Preference number: 2 (lower is better)
Translates to: RYSPEELAILRKEQFKAIECLTH*SYCYIC
Trigger: GCAGATGTAACAGTAGCTCCAGTGAGTCAGACACTC...AATGGCCTTGAATTGCTCTTTCCTTAAAATAGCTAGCTCTTCAGGAGAGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR GCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGGCGCCCACCACCATaGCCAGCTAATTTTTCTATT +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMRRPPP*PANFSI
Trigger: AATAGAAAAATTAGCTGGGCATGGTGGTGGGCGCCT...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR GCA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGCTCACTGCAACCTCTaGTTTCCAATTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRAHCNL*FPISSD
Trigger: ATCGCTTGAAATTGGAAAGCAGAGGTTGCAGTGAGC...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR GCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGTTCAAGCAATTCTTCTaGTTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMFKQFF*FSLLSS
Trigger: GCTACTCAGGAGGCTGAAGCAGAAGAATTGCTTGAA...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR CCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATGTCAATACTATGAACTaGAAGAAGTGGTCAAACACA +
Preference number: 2 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYVNTMN*KKWSNT
Trigger: TGTGTTTGACCACTTCTTCCAGTTCATAGTATTGAC...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CAA 90 bp TCTCTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTaGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTT +
Preference number: 2 (lower is better)
Translates to: SLWFLEDSSTAYPEY*FGCHCIIKASSVMF
Trigger: AAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR-3UTR GCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGTGTCTTGGAGACACATaGCATTTGAGTACAGTAACT +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMCLGDT*HLSTVT
Trigger: AGTTACTGTACTCAAATGGCATGTGTCTCCAAGACA...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR GCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGACATACATTAACGTATaGCTTTCCTCAGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMTYINV*LSSASL
Trigger: GAGACTTGCTGAGGAAAGGCATACGTTAATGTATGT...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CAA 90 bp GTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTaGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACTTATT +
Preference number: 2 (lower is better)
Translates to: VLRGFLYCISGVLVW*SLYNKGFFCDVSLI
Trigger: AATAAGTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR CCA 72 bp CACAGCTTCCGCCCGGGGAGGAGGCGGGGCTGGCCCTaGGCCACACCTTCTTTCTGCTCCAGTTCTAGAAGC +
Preference number: 3 (lower is better)
Translates to: HSFRPGRRRGWP*ATPSFCSSSRS
Trigger: GCTTCTAGAACTGGAGCAGAAAGAAGGTGTGGCCCAGGGCCAGCCCCGCCTCCTCCCCGGGCGGAAGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR GCA 72 bp TCTCTTCCGGACGTCTCCATTCTGCCCGGGACCGGGTaGTCAGCCCCAACACAGTGGCAGTCCAATGGGCTG +
Preference number: 3 (lower is better)
Translates to: SLPDVSILPGTG*SAPTQWQSNGL
Trigger: CAGCCCATTGGACTGCCACTGTGTTGGGGCTGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR GCA 72 bp CTCGCTGCCTTGCATCTGCTCTACTCCCAGGTGTGCTaGTGTGGGCCTGCTCCTTGTGCCAGCTGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: LAALHLLYSQVC*CGPAPCASCCH
Trigger: GTGGCAGCAGCTGGCACAAGGAGCAGGCCCACAGCAGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR GCA 72 bp TGCCACTCTAGGTGGCCCTCTCTCACCGCATCCACTTaGAGCCGCCTGTTCTACATCCTCCTCCATGTGGGG +
Preference number: 3 (lower is better)
Translates to: CHSRWPSLTAST*SRLFYILLHVG
Trigger: CCCCACATGGAGGAGGATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAGAGAGGGCCACCTAGAGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CCA 72 bp CCACTTGCAGCCGCCTGTTCTACATCCTCCTCCATGTaGGGGCCTCAGCAATCTGCTGCCTCCTGTTTGGCC +
Preference number: 3 (lower is better)
Translates to: PLAAACSTSSSM*GPQQSAASCLA
Trigger: GGCCAAACAGGAGGCAGCAGATTGCTGAGGCCCCCACATGGAGGAGGATGTAGAACAGGCGGCTGCAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CCA 72 bp GACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATaGGCTGAGGACAGAAGCAACTGCTGCTCTCATCTG +
Preference number: 3 (lower is better)
Translates to: DRVLSPNTVAVQ*AEDRSNCCSHL
Trigger: CAGATGAGAGCAGCAGTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTGAGCACCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR CAA 90 bp TGGTTACCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCCCCCAGCCCCTTATCTaGAGGCGCCGCCGCCACCGC +
Preference number: 3 (lower is better)
Translates to: WLPLPTGSGKMEWALDTLPQPLI*RRRRHR
Trigger: GCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGGG...GAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGGTAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CAA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGCCCCAGCCCCTTATCTaGAGGCGCCGCCGCCACCGC +
Preference number: 3 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWPQPLI*RRRRHR
Trigger: GCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGGG...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 72 bp CAGGTGAGAGGGTGCGAAGGGGAGAGTGGCCGAAGCTaGGGAGGAAGACGTGCAGAAGCCAATAAAAACGAC +
Preference number: 3 (lower is better)
Translates to: QVRGCEGESGRS*GGRRAEANKND
Trigger: GTCGTTTTTATTGGCTTCTGCACGTCTTCCTCCCCAGCTTCGGCCACTCTCCCCTTCGCACCCTCTCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR TCA 72 bp CCTAACACCCAAATCAGCAGCTCAAAGAACCACCGCTaGTCCCAGCAGACAGTGTGGCACCAGCCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: PNTQISSSKNHR*SQQTVWHQPFP
Trigger: AGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGAGCTGCTGATTTGGGTGTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CAA 90 bp ACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGGCCCTTTCCTGGCTCTaGGGCTGGAAGTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: TQGVISVWAEVNTMNWKKALSWL*GWKWGW
Trigger: CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGC...CTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR GCA 72 bp CGTTCTGTTTTGCAGAAGCCCTCACTGTGTTTCTGCTaGCCTGAAACAGTGGAGGCAGACAAAGGTGAGTGC +
Preference number: 3 (lower is better)
Translates to: RSVLQKPSLCFC*PETVEADKGEC
Trigger: GCACTCACCTTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAAAACAGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CAA 90 bp GTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCAACTGCATGGCTGGAATCAGCTaGAAACAGAACCTGAGTAAA +
Preference number: 3 (lower is better)
Translates to: VLSPNTVAVQWAEDRSNCMAGIS*KQNLSK
Trigger: TTTACTCAGGTTCTGTTTCAAGCTGATTCCAGCCAT...GCAGTTGCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR-3UTR CAA 90 bp TCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTAAATCTCTCCCGCCATGTTTCGAAAGCCCTACTAAGTaGTCAGTGGGCGGCAATCCC +
Preference number: 3 (lower is better)
Translates to: SFWFVAPGIICKSLPPCFESPTK*SVGGNP
Trigger: GGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTC...GAAACATGGCGGGAGAGATTTACAGATTATACCTGGGGCAACGAACCAGAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409646.5
ENST00000448830.2
3UTR CCA 72 bp CACAGTCTAATGTGCTGGGCAGAGTGTCTGACTCACTaGAGCTACTGTTACATCTGCATCCCAGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: HSLMCWAECLTH*SYCYICIPAQE
Trigger: CTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGTGAGTCAGACACTCTGCCCAGCACATTAGACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 72 bp AGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTaGAAAAGACCTTCATCAAGGGTAGCTGGGCCACCT +
Preference number: 3 (lower is better)
Translates to: RAFGYTAMREQN*KRPSSRVAGPP
Trigger: AGGTGGCCCAGCTACCCTTGATGAAGGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 72 bp AAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTaGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCT +
Preference number: 3 (lower is better)
Translates to: KLLHRAFAFTAT*RSVFSSGRLHS
Trigger: AGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR-3UTR CAA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCAGAGAAAGTGAACGCTaGACAGCAGCTGACCACGGG +
Preference number: 3 (lower is better)
Translates to: LILILRSREAGRQNHPHSRESER*TAADHG
Trigger: CCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCT...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
3UTR-3UTR CAA 90 bp CCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCGTTCTGGTTCGTTGCCTCTCACCGCATCCACTaGCAGCCGCCTGTTCTACAT +
Preference number: 3 (lower is better)
Translates to: PIKTTGLFSPLMSFWFVASHRIH*QPPVLH
Trigger: ATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAGA...GGCAACGAACCAGAACGACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CCA 72 bp CTACTAAGTTGTCAGTGGGCGGCAATCCCAAATGGCTaGAATCAGCTTGAAACAGAACCTGTTTGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: LLSCQWAAIPNG*NQLETEPVWPL
Trigger: GAGAGGCCAAACAGGTTCTGTTTCAAGCTGATTCCAGCCATTTGGGATTGCCGCCCACTGACAACTTAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409646.5
3UTR TCA 72 bp CACGCACCCACCCACCTCAGGGAACTCCGTTCAACCTaGATGACGTCTAATCCTAAACCAATAAAGAATGCT +
Preference number: 3 (lower is better)
Translates to: HAPTHLRELRST*MTSNPKPIKNA
Trigger: AGCATTCTTTATTGGTTTAGGATTAGACGTCATTCAGGTTGAACGGAGTTCCCTGAGGTGGGTGGGTGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
3UTR CCA 72 bp GAACTGGAAGAAGTGGTCAAACACAGTCTAATGTGCTaGGCAGAGTGTCTGACTCACTGGAGCTACTGTTAC +
Preference number: 3 (lower is better)
Translates to: ELEEVVKHSLMC*AECLTHWSYCY
Trigger: GTAACAGTAGCTCCAGTGAGTCAGACACTCTGCCCAGCACATTAGACTGTGTTTGACCACTTCTTCCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CAA 90 bp GCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCGCATATCCGGAGTACTaGTTTGGTTGTCATTGTATA +
Preference number: 3 (lower is better)
Translates to: AQNHRTNQGIEERSTEATAYPEY*FGCHCI
Trigger: TATACAATGACAACCAAACAAGTACTCCGGATATGC...GGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
3UTR-3UTR CAA 90 bp AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAGAGCAGCAGGATTTTTaGGCCAACTTTCAAGCAGAC +
Preference number: 3 (lower is better)
Translates to: REAGRQNHPHSMRNDRREEQQDF*ANFQAD
Trigger: GTCTGCTTGAAAGTTGGCCAAAAAATCCTGCTGCTC...TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
3UTR-3UTR CAA 90 bp CCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCGTTTTAATCCTGATTTaGAGGTCAAGGGAAGCGGGA +
Preference number: 3 (lower is better)
Translates to: PWRKENKEFSPGHTDIRSVLILI*RSREAG
Trigger: TCCCGCTTCCCTTGACCTCAAAATCAGGATTAAAAC...GCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 72 bp AGCCTGCTTATAATGAAAGCCCTACTAAGTTGTCAGTaGGCGGCAATCCCAAATGGCTGGAATCAGCTTGAA +
Preference number: 3 (lower is better)
Translates to: SLLIMKALLSCQ*AAIPNGWNQLE
Trigger: TTCAAGCTGATTCCAGCCATTTGGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTCATTATAAGCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409646.5
ENST00000448830.2
3UTR-3UTR CAA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAAAGAGACGGCTCTGTaGCCCAGGCTAGAGTGCCTC +
Preference number: 3 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMKETAL*PRLECL
Trigger: GAGGCACTCTAGCCTGGGCAACAGAGCCGTCTCTTT...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR TCA 72 bp CCTCAAGGACACACAGGGAGTTATCTCCGTTTGGGCTaGAGTCAATACTATGAACTGGAAGAAGTGGTCAAA +
Preference number: 3 (lower is better)
Translates to: PQGHTGSYLRLG*SQYYELEEVVK
Trigger: TTTGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR TCA 72 bp CATTCCAGACACACATGGGTCTGCCATTATATTTGGTaGGGAGGTAGAACAGGTCTAAAAGCTAAGGCCCTT +
Preference number: 3 (lower is better)
Translates to: HSRHTWVCHYIW*GGRTGLKAKAL
Trigger: AAGGGCCTTAGCTTTTAGACCTGTTCTACCTCCTCACCAAATATAATGGCAGACCCATGTGTGTCTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 72 bp CAATACCTCAAGGACACACAGGGAGTTATCTCCGTTTaGGCTGAAGTCAATACTATGAACTGGAAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: QYLKDTQGVISV*AEVNTMNWKKW
Trigger: CCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGTGTCCTTGAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR CCA 72 bp AAGCTAAGGCCCTTCATATTCTCTAACCAGAGCCTTTaGTTACACAGCTATGAGGGAGCAGAACTGGAAAAG +
Preference number: 3 (lower is better)
Translates to: KLRPFIFSNQSL*LHSYEGAELEK
Trigger: CTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGAGAATATGAAGGGCCTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
3UTR-3UTR CAA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGAAAGCACGCATCAGTaGGTTAGGGCAATAAGCGCC +
Preference number: 3 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRESTHQ*VRAISA
Trigger: GGCGCTTATTGCCCTAACCAACTGATGCGTGCTTTC...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR CCA 72 bp TTAGGCCAACTCCATCCTAGAGATGGTGTTCAAGGGTaGGGAACAAAAATCACAGAAAAGAAGTCTCTATGG +
Preference number: 3 (lower is better)
Translates to: LGQLHPRDGVQG*GTKITEKKSLW
Trigger: CCATAGAGACTTCTTTTCTGTGATTTTTGTTCCCCACCCTTGAACACCATCTCTAGGATGGAGTTGGCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR TCA 72 bp GAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTaGATACTGTTGAGAGCTAGTCAGATGAATGAGACT +
Preference number: 3 (lower is better)
Translates to: EYSNSAETPDVP*ILLRASQMNET
Trigger: AGTCTCATTCATCTGACTAGCTCTCAACAGTATTCAAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR CAA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGGAGACACATGCCATTaGAGTACAGTAACTCTGCTG +
Preference number: 3 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRGDTCH*STVTLL
Trigger: CAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCC...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR-3UTR CAA 90 bp TGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTAGAGTTCTCCCTTTTTaGGTGGGAAAGGGCAGTCAT +
Preference number: 3 (lower is better)
Translates to: CISGVLVWLSLYNKGFFCRVLPF*VGKGSH
Trigger: ATGACTGCCCTTTCCCACCAAAAAAGGGAGAACTCT...ACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR-3UTR CAA 90 bp GGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCAGGAGTACTTGTTTGGTaGTCATTGTATAATAAAGGC +
Preference number: 3 (lower is better)
Translates to: GVISVWAEVNTMNWKKWSGVLVW*SLYNKG
Trigger: GCCTTTATTATACAATGACAACCAAACAAGTACTCC...TGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
3UTR-3UTR CAA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCTGTAATTGCCATTaGAGTGTCCTTACAGCAGAC +
Preference number: 3 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRVCNCH*SVLTAD
Trigger: GTCTGCTGTAAGGACACTCAAATGGCAATTACAGAC...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR CCA 72 bp CAAGCATGTTGTAGGTACCAAAATTCTAACTCAAGGTaGCCTATGAACTGGGTTCATAACCTACATCTATCT +
Preference number: 3 (lower is better)
Translates to: QACCRYQNSNSR*PMNWVHNLHLS
Trigger: AGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTGGTACCTACAACATGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR CCA 72 bp AGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTaGTTGTCATTGTATAATAAAGGCTTCTTCTGTGAT +
Preference number: 3 (lower is better)
Translates to: RGFLYCISGVLV*LSLYNKGFFCD
Trigger: ATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR TCA 72 bp GTTGTAGGTACCAAAATTCTAACTCAAGGTGGCCTATaGACTGGGTTCATAACCTACATCTATCTATATATA +
Preference number: 3 (lower is better)
Translates to: VVGTKILTQGGL*TGFITYIYLYI
Trigger: TATATATAGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTGGTACCTACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
3UTR CCA 72 bp AGGTACCAAAATTCTAACTCAAGGTGGCCTATGAACTaGGTTCATAACCTACATCTATCTATATATATAGTG +
Preference number: 3 (lower is better)
Translates to: RYQNSNSRWPMN*VHNLHLSIYIV
Trigger: CACTATATATATAGATAGATGTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGTTAGAATTTTGGTACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACTCGGCTCTGCCCTTGGAGACCCAGCCCCTTATCTTaGGGCGCCGCCGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: VGVGKDQQGLKTRLCPWRPSPLS*GAAATA
Trigger: TGCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGG...TCTCCAAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTTTCCCCACCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GACCGGGTGCTCAGCCCCAACACAGTGGCAGTCCAATGGGCTGAGGACAGAAGCCCGACTTCCGGCAACTaGCACAGCTTCCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: DRVLSPNTVAVQWAEDRSPTSGN*HSFRPG
Trigger: CCCCGGGCGGAAGCTGTGTCAGTTGCCGGAAGTCGG...GCTTCTGTCCTCAGCCCATTGGACTGCCACTGTGTTGGGGCTGAGCACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR CCA 90 bp TCCCTGGGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCCCGGCACCTCCCAACTGCCCCCTAATCTaGAGAGAACAGCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLGQGWWVPRPAPAPAPPNCPLI*REQPEW
Trigger: CCACTCAGGCTGTTCTCTCCAGATTAGGGGGCAGTT...GGGAGGTGCCGGGGCTGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR TCA 90 bp GGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGACCGGGTGCTCACTGGAAATCCTGACCTaGCACAGTCCTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGQCSLPDVSILPGTGCSLEILT*HSPPSP
Trigger: TGGGCTGGGAGGACTGTGTCAGGTCAGGATTTCCAG...TGAGCACCCGGTCCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGCTGGGCGCGAACCGCTaGGCCCGCCTACCAACCAGG +
Preference number: 4 (lower is better)
Translates to: NDRRESERLTAADHGKSVLGANR*ARLPTR
Trigger: CCTGGTTGGTAGGCGGGCTCAGCGGTTCGCGCCCAG...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACTCGGCTCTGCCCTTGGAGAAGCTGGGCCACCTTCTaGGTCAAGGTTGCCTCATGC +
Preference number: 4 (lower is better)
Translates to: VGVGKDQQGLKTRLCPWRSWATF*VKVASC
Trigger: GCATGAGGCAACCTTGACCCAGAAGGTGGCCCAGCT...TCTCCAAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTTTCCCCACCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCGCCCCTCTGCGGCTaGAACCCTCAAGGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: AQNHRTNQGIEERSTEATPPLCG*NPQGVA
Trigger: TGCAACCCCTTGAGGGTTTCAGCCGCAGAGGGGCGG...GGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp ACTTGCAGCCGCCTGTTCTACATCCTCCTCCATGTGGGGGCCTCAGCAATCTGCCCTGTTTGGCCTCTCTaGCTGTCCAGTGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: TCSRLFYILLHVGASAICPVWPL*LSSAQW
Trigger: CCACTGAGCACTGGACAGTCAGAGAGGCCAAACAGG...GCAGATTGCTGAGGCCCCCACATGGAGGAGGATGTAGAACAGGCGGCTGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR CCA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCCGGGCGAGCTCACGCTaGTTACCGCGGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGRASSR*LPRVMA
Trigger: CGCCATGACCCGCGGTAACCAGCGTGAGCTCGCCCG...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
CDS-3UTR CCA 90 bp CCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCGCAACCTGGAGGTCCGGGCGAGCTCACGCTaGTTACCGCGGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: PKDKAPSQGICIYRNLEVRASSR*LPRVMA
Trigger: CGCCATGACCCGCGGTAACCAGCGTGAGCTCGCCCG...GACCTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTCCTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR CCA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGGTCACGTGGGCAGGTTaGGGGTGGAGGGGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: NDRRESERLTAADHGKSVVTWAG*GWRGAA
Trigger: AGCCGCACCCCTCCACCCCCAACCTGCCCACGTGAC...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGGCGGAGCGCTCAGCGTaGGGCGGGGCTTCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: ILILRSREAGRQNHPHSMAERSA*GGASRV
Trigger: CACTCGGGAAGCCCCGCCCCACGCTGAGCGCTCCGC...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGCCCAGCCCCTTATCTTaGGGCGCCGCCGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: ILILRSREAGRQNHPHSMPSPLS*GAAATA
Trigger: TGCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGG...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AGAGTGGCCGAAGCTGGGGAGGAAGACGTGCAGAAGCCAATAAAAACGACAGGCGTCCCTTCTGTCAGGTaGGAGGGTGCGAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVAEAGEEDVQKPIKTTGVPSVR*EGAKGR
Trigger: TCTCCCCTTCGCACCCTCTCACCTGACAGAAGGGAC...GCCTGTCGTTTTTATTGGCTTCTGCACGTCTTCCTCCCCAGCTTCGGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR TCA 90 bp GAGAACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACGAGTGGCCGCAGTGTTaGGGCCCTAAGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: ENSLSGRSVEALRTKLLHEWPQC*GPKDKA
Trigger: AGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTC...GTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR CCA 90 bp GATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGTTCATCAAGGGTAGCTaGGCCACCTTCTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: DPSRQCGTSPFLALGLEVFIKGS*ATFWVK
Trigger: CTTGACCCAGAAGGTGGCCCAGCTACCCTTGATGAA...CACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGGTGCTTGAGCCGGGGTaGGTAAGTGGCGGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: NDRRESERLTAADHGKSVVLEPG*VSGGGS
Trigger: CGACCCTCCGCCACTTACCCACCCCGGCTCAAGCAC...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
3UTR CAA 72 bp GTATGCCTTTCCTCAGCAAGTCTCCACCTCGCTGCCTaGCATCTGCTCTACTCCCAGGTGTGCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VCLSSASLHLAA*HLLYSQVCCCG
Trigger: CCCACAGCAGCACACCTGGGAGTAGAGCAGATGCAAGGCAGCGAGGTGGAGACTTGCTGAGGAAAGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp CCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCCTGAAGGGCTGCGAGGCCAGCTaGCCAAGAAACCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLPTGSGKMEWALDTLLKGCEAS*PRNPSS
Trigger: GCTGGAGGGGTTTCTTGGTCAGCTGGCCTCGCAGCC...CTTCAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGCGGGGCTTCCCGAGTaGGACGTAGGGACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESAGLPE*DVGTGL
Trigger: CAGGCCCGTCCCTACGTCTCACTCGGGAAGCCCCGC...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp GGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGCCCCCAGCAGACGAACAAACTaGGGGGAAGGAAGCACAAAA +
Preference number: 4 (lower is better)
Translates to: GLRTPLSGAVTGTTLLAPSRRTN*GEGSTK
Trigger: TTTTGTGCTTCCTTCCCCTCAGTTTGTTCGTCTGCT...GGGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445816.5
CDS-3UTR GCA 90 bp GAGAACAGCCTGAGTGGCCGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACGCCTCAGCAATCTGCTaGCTCCTGTTTGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ENSLSGRSVEALRTKLLHASAIC*LLFGLS
Trigger: AGAGAGGCCAAACAGGAGGCAGCAGATTGCTGAGGC...GTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTCAGGCTGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR CCA 90 bp CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATTCCCAGCAGACAGTGTaGCACCAGCCCTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLILRRRRHRIISPDNKYSQQTV*HQPFPG
Trigger: GCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGA...ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCCGGGGTGGGTAAGTaGCGGAGGGTCGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: NHPHSMRNDRRESERLTAAGVGK*RRVAGG
Trigger: TCCGCCTGCGACCCTCCGCCACTTACCCACCCCGGC...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp GCCCCAGGTATAATCTGTAAATCTCTCCCGCCATGTTTCCAGCCCCAGGTGTTTCTGGAGAGAACAGCCTaGGTGGCCGCAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: APGIICKSLPPCFQPQVFLERTA*VAAVLR
Trigger: CCTCAACACTGCGGCCACTCAGGCTGTTCTCTCCAG...AAACACCTGGGGCTGGAAACATGGCGGGAGAGATTTACAGATTATACCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR GCA 90 bp GGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGCCCCCAAACACAGTCTAATGTaGTGGGCAGAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: GLRTPLSGAVTGTTLLAPKHSLM*WAECLT
Trigger: AGTCAGACACTCTGCCCAGCACATTAGACTGTGTTT...GGGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCGCACCAGCCCTTTCCTaGCTCTTGGGCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGAPALS*LLGWKW
Trigger: CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGC...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACTCGGCTCTGCCCTTGGAGATCAGGTAAGATGGAGTaGGCCTTAGATACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VGVGKDQQGLKTRLCPWRSGKME*ALDTLL
Trigger: CAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGA...TCTCCAAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTTTCCCCACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp CTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTGTGGAGGGGTGCGGCTaGCGATGTGGCGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LWFLEDSSTAYPEYLFGCVEGCG*RCGAPA
Trigger: CGCGGGAGCGCCACATCGCCAGCCGCACCCCTCCAC...ACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp GGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGCCCCCTGCCATTATATTTGGTaGGGAGGTAGAACAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GLRTPLSGAVTGTTLLAPCHYIW*GGRTGL
Trigger: TAGACCTGTTCTACCTCCTCACCAAATATAATGGCA...GGGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATGAGTGGCCGCAGTGTTaGGGCCCTAAGGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: AFAFTATWRSVFSSGRLHEWPQC*GPKDKA
Trigger: AGCTTTGTCCTTAGGGCCTCAACACTGCGGCCACTC...ATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR TCA 90 bp TCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTAAATCTCTCCCGCCATGTTTCACTCCTGATCCCAGGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SFWFVAPGIICKSLPPCFTPDPR*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACCTGGGATCAGGAGT...GAAACATGGCGGGAGAGATTTACAGATTATACCTGGGGCAACGAACCAGAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp GGCCTGCGTACTCCTCTATCTGGGGCTGTTACTGGCACCACTCTGTTGGCCCCCAGAGGATTCCTCTACTaGATATCCGGAGTACTTGTT +
Preference number: 4 (lower is better)
Translates to: GLRTPLSGAVTGTTLLAPRGFLY*ISGVLV
Trigger: AACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT...GGGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR GCA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAACTTCTGGGTCAAGGTTaGCTCATGCTGGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LQKPSLCFCCPETVEADKLLGQG*LMLGLR
Trigger: ACGCAGGCCCAGCATGAGGCAACCTTGACCCAGAAG...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCTGCAGAGTGACCTCATaGGGGGACAGTTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: AQNHRTNQGIEERSTEATCRVTS*GDSLGY
Trigger: GTACCCCAAACTGTCCCCGCATGAGGTCACTCTGCA...GGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp ACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGCGGGCGAGCTCACGCTaGTTACCGCGGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: TQGVISVWAEVNTMNWKKRASSR*LPRVMA
Trigger: CGCCATGACCCGCGGTAACCAGCGTGAGCTCGCCCG...CTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp CCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCCTGAAGGGCTGGAAGTGGGGGTaGGGAAAGACCAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLPTGSGKMEWALDTLLKGWKWG*GKTNRD
Trigger: GTCCCTGTTGGTCTTTCCCCACCCCCACTTCCAGCC...CTTCAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATAAGCTCGGGGCTAACTaGGCGCGAACCGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: NPDFEVKGSGKTKPPSFHKLGAN*ARTAEP
Trigger: GGGCTCAGCGGTTCGCGCCCAGTTAGCCCCGAGCTT...ATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGACGCTTGACAGCAGCTaGCCACGGGAAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: ILILRSREAGRQNHPHSMTLDSS*PREVGE
Trigger: CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGT...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
CDS-3UTR TCA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGTCAAAGAACCACCGCTaGTCCCAGCAGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NDRRESERLTAADHGKSVSKNHR*SQQTVW
Trigger: CCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGA...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACTCGGCTCTGCCCTTGGAGATGCCATTATATTTGGTaGGGAGGTAGAACAGGTCTA +
Preference number: 4 (lower is better)
Translates to: VGVGKDQQGLKTRLCPWRCHYIW*GGRTGL
Trigger: TAGACCTGTTCTACCTCCTCACCAAATATAATGGCA...TCTCCAAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTTTCCCCACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAACTCCTGATCCCAGGTaGTCCACCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLSWRHMPFEYSNSAETPTPDPR*STCLGL
Trigger: GAGGCCGAGGCAGGTGGATCACCTGGGATCAGGAGT...TGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp ACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTGCCTCATGCTGGGCCTaGGTACTCCTCTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: TNQGIEERSTEATPGFNPASCWA*VLLYLG
Trigger: CCCCAGATAGAGGAGTACGCAGGCCCAGCATGAGGC...AGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGCTCAAAGGCCTCATGCTGGGCCTaGGTACTCCTCTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: CYICIPAQEPNTQISSSKASCWA*VLLYLG
Trigger: CCCCAGATAGAGGAGTACGCAGGCCCAGCATGAGGC...CTTTGAGCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GCCCCAGGTATAATCTGTAAATCTCTCCCGCCATGTTTCCAGCCCCAGGTGTTTTGTACTTTCTCTGCTTaGGGGCGGCAGCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: APGIICKSLPPCFQPQVFCTFSA*GRQQKA
Trigger: GGCTTTCTGCTGCCGCCCGCAAGCAGAGAAAGTACA...AAACACCTGGGGCTGGAAACATGGCGGGAGAGATTTACAGATTATACCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409646.5
CDS-3UTR CCA 90 bp ATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGCGGGCGAGCTCACGCTaGTTACCGCGGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: IHKLSWRHMPFEYSNSAERASSR*LPRVMA
Trigger: CGCCATGACCCGCGGTAACCAGCGTGAGCTCGCCCG...CTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR CCA 90 bp AGGTCGAGAGAAAGGTCAGATATCTCAAGCCTGCTTATAATGAAAGCCCTACTACGGGCGAGCTCACGCTaGTTACCGCGGGTCATGGCG +
Preference number: 4 (lower is better)
Translates to: RSRERSDISSLLIMKALLRASSR*LPRVMA
Trigger: CGCCATGACCCGCGGTAACCAGCGTGAGCTCGCCCG...TAGTAGGGCTTTCATTATAAGCAGGCTTGAGATATCTGACCTTTCTCTCGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409646.5
ENST00000448830.2
CDS-3UTR CCA 90 bp ATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGCATTTACCGCAACCTaGAGGTCAGTGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IYRNLEVSVLFRTSPFCPAFTAT*RSVFSS
Trigger: GGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGC...CGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
3UTR CAA 72 bp CATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTaGACAGCAGCTGACCACGGGAAGTCGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HSMRNDRRESER*TAADHGKSVSS
Trigger: GCTGCTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
3UTR CAA 72 bp AGGAAGGCGGTTCGTCTCTCAGACTTCCTTTCGGGTTaGTACAGTGTTTTGTGCGAGGCCTTCTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: RKAVRLSDFLSG*YSVLCEAFSQT
Trigger: GGTCTGAGAGAAGGCCTCGCACAAAACACTGTACAAACCCGAAAGGAAGTCTGAGAGACGAACCGCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp CTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTGGCTGCGAGGCCAGCTaGCCAAGAAACCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LWFLEDSSTAYPEYLFGCGCEAS*PRNPSS
Trigger: GCTGGAGGGGTTTCTTGGTCAGCTGGCCTCGCAGCC...ACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR TCA 90 bp CCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCCTGAAGGGAGGCAGACAAAGGTaGGTGCCAAGTGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: PLPTGSGKMEWALDTLLKGGRQR*VPSEEP
Trigger: TGGTTCCTCACTTGGCACTCACCTTTGTCTGCCTCC...CTTCAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATCTCACAACAACCCTGTaGGGTAGGTATTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RLCPWRKENKEFSPGHTDLTTTL*GRYLLH
Trigger: ATGGAGCAAATACCTACCTCACAGGGTTGTTGTGAG...ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCACGTGACCGTGCAGAGTaGCCTCATGCGGGGACAGTT +
Preference number: 4 (lower is better)
Translates to: NHPHSMRNDRRESERLTARDRAE*PHAGTV
Trigger: AACTGTCCCCGCATGAGGTCACTCTGCACGGTCACG...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp CTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTGCGGGCTCGAGCACGTaGCCGTGCAGAGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: LWFLEDSSTAYPEYLFGCAGSST*PCRVTS
Trigger: TGAGGTCACTCTGCACGGTCACGTGCTCGAGCCCGC...ACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp CTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTTCCACGGGTCGTGCTTaGGCCGGGGTGGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LWFLEDSSTAYPEYLFGCSTGRA*AGVGKW
Trigger: CCACTTACCCACCCCGGCTCAAGCACGACCCGTGGA...ACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp GGAGGAAGACGTGCAGAAGCCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATCTGGAGAGAACAGCCTaGGTGGCCGCAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GGRRAEANKNDRPLFSSNLERTA*VAAVLR
Trigger: CCTCAACACTGCGGCCACTCAGGCTGTTCTCTCCAG...ATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGGCTTCTGCACGTCTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR TCA 90 bp GCAGTCCAATGGGCTGAGGACAGAAGCAACTGCTGCTCTCATCTGCCTTCCATCACTCAAGGTGGCCTATaGACTGGGTTCATAACCTAC +
Preference number: 4 (lower is better)
Translates to: AVQWAEDRSNCCSHLPSITQGGL*TGFITY
Trigger: GTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGT...GATGGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTCCTCAGCCCATTGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp TCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTAAATCTCTCCCGCCATGTTTCTCTGCTTCAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: SFWFVAPGIICKSLPPCFSASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGA...GAAACATGGCGGGAGAGATTTACAGATTATACCTGGGGCAACGAACCAGAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp CACTCTAGGTGGCCCTCTCTCACCGCATCCACTTGCAGCCGCCTGTTCTACATCTCCGTTCAACCTGAATaGCGTCTAATCCTAAACCAA +
Preference number: 4 (lower is better)
Translates to: HSRWPSLTASTCSRLFYISVQPE*RLILNQ
Trigger: TTGGTTTAGGATTAGACGTCATTCAGGTTGAACGGA...GATGTAGAACAGGCGGCTGCAAGTGGATGCGGTGAGAGAGGGCCACCTAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAACTTCTGGGTCAAGGTTaGCTCATGCTGGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: REAGRQNHPHSMRNDRRELLGQG*LMLGLR
Trigger: ACGCAGGCCCAGCATGAGGCAACCTTGACCCAGAAG...TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GTGGGGGTGGGGAAAGACCAACAGGGACTGAAGACTCGGCTCTGCCCTTGGAGATTCCTACAACTATTCTaGCTTCCACTTCGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VGVGKDQQGLKTRLCPWRFLQLF*LPLRLL
Trigger: AAGAAGACGAAGTGGAAGGCAGAATAGTTGTAGGAA...TCTCCAAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTTTCCCCACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATGCAGACAAAGGTGAGTaGCAAGTGAGGAACCATAAG +
Preference number: 4 (lower is better)
Translates to: RLCPWRKENKEFSPGHTDADKGE*QVRNHK
Trigger: CTTATGGTTCCTCACTTGGCACTCACCTTTGTCTGC...ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp CGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCGAAGTAATAGCACTCTaGTTGCGGGCGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RSVEALRTKLLHRAFAFTEVIAL*LRAAAE
Trigger: TTCTGCTGCCGCCCGCAAGCAGAGTGCTATTACTTC...GGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp GGAAGACGTGCAGAAGCCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCGGGGCCTCAGCAATCTaGTGCCTCCTGTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRRAEANKNDRPLFSSNVGASAI*CLLFGL
Trigger: GAGGCCAAACAGGAGGCAGCAGATTGCTGAGGCCCC...GACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGGCTTCTGCACGTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR CCA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGGCTGGAAGTGGGGGTaGGGAAAGACCAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: NHPHSMRNDRRESERLTAGWKWG*GKTNRD
Trigger: GTCCCTGTTGGTCTTTCCCCACCCCCACTTCCAGCC...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGCACCAGCCCTTTCCTaGCTCTTGGGCTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKAPALS*LLGWKW
Trigger: CCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGC...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGATCTGGGGCTGTTACTaGCACCACTCTGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ILILRSREAGRQNHPHSMIWGCY*HHSVGP
Trigger: GGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGAT...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCAAGGTTGCCTCATGCTaGGCCTGCGTACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGKVASC*ACVLLY
Trigger: ATAGAGGAGTACGCAGGCCCAGCATGAGGCAACCTT...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCAGCTGGGCCACCTTCTaGGTCAAGGTTGCCTCATGC +
Preference number: 4 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTSWATF*VKVASC
Trigger: GCATGAGGCAACCTTGACCCAGAAGGTGGCCCAGCT...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTTCATCAAGGGTAGCTaGGCCACCTTCTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGFIKGS*ATFWVK
Trigger: CTTGACCCAGAAGGTGGCCCAGCTACCCTTGATGAA...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCGTGCGGCTGGCGATGTaGCGCTCCCGCGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFVRLAM*RSRGLE
Trigger: CTCGAGCCCGCGGGAGCGCCACATCGCCAGCCGCAC...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp ACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGACGCTTGACAGCAGCTaGCCACGGGAAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: TQGVISVWAEVNTMNWKKTLDSS*PREVGE
Trigger: CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGT...CTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCAACGCTTGACAGCAGCTaGCCACGGGAAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GVISVWAEVNTMNWKKWSTLDSS*PREVGE
Trigger: CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGT...TGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp CCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCGTTCTGGTTCGTTGCCCCTGTTTGGCCTCTCTaGCTGTCCAGTGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PIKTTGLFSPLMSFWFVAPVWPL*LSSAQW
Trigger: CCACTGAGCACTGGACAGTCAGAGAGGCCAAACAGG...GGCAACGAACCAGAACGACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409646.5
ENST00000448830.2
CDS-3UTR TCA 90 bp TTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGCCCGGGGGTATTCTTCTACACTaGTTTTTCATACAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPQPGGQCSLPDVSILPGGILLH*FFIQVC
Trigger: GCACACCTGTATGAAAAATCAGTGTAGAAGAATACC...CCCGGGCAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGGTCAAGGTTGCCTCATaGTGGGCCTGCGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWVKVAS*WACVLL
Trigger: GAGGAGTACGCAGGCCCAGCATGAGGCAACCTTGAC...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GGTATAATCTGTAAATCTCTCCCGCCATGTTTCCAGCCCCAGGTGTTTAGGTCGTTGAAACAGAACCTCTaGTTGCGGGCGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GIICKSLPPCFQPQVFRSLKQNL*LRAAAE
Trigger: TTCTGCTGCCGCCCGCAAGCAGAGGTTCTGTTTCAA...CGACCTAAACACCTGGGGCTGGAAACATGGCGGGAGAGATTTACAGATTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409291.5
CDS-3UTR GCA 90 bp GGTATAATCTGTAAATCTCTCCCGCCATGTTTCCAGCCCCAGGTGTTTAGGTCGTGTGTGTACTTTCTCTaGTTGCGGGCGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GIICKSLPPCFQPQVFRSCVYFL*LRAAAE
Trigger: TTCTGCTGCCGCCCGCAAGCAGAGAAAGTACACACA...CGACCTAAACACCTGGGGCTGGAAACATGGCGGGAGAGATTTACAGATTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409646.5
CDS-3UTR CCA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGATCTGGGGCTGTTACTaGCACCACTCTGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKIWGCY*HHSVGP
Trigger: GGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGAT...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCGTGTCAGCCATCCTCTaGTCTCTCGGGTCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSVSAIL*SLGSPK
Trigger: CTTCGGAGACCCGAGAGACCAGAGGATGGCTGACAC...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCTCGGTTTCAGAGCGGTaGAACCGCGGGCGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSSVSER*NRGREK
Trigger: TTTTTCCCGCCCGCGGTTCCACCGCTCTGAAACCGA...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAGGAGCCGGCTCCCATTaGACAAGAAAAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: REAGRQNHPHSMRNDRREGAGSH*TRKSTW
Trigger: CCACGTGCTTTTTCTTGTCCAATGGGAGCCGGCTCC...TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTAGGTCCCGCCCCTTCTaGCAACGTAGCACAGTCGTT +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESRSRPF*QRSTVV
Trigger: AACGACTGTGCTACGTTGCCAGAAGGGGCGGGACCT...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp GTAAATCTCTCCCGCCATGTTTCCAGCCCCAGGTGTTTAGGTCGAGAGAAAGGTGCATTTACCGCAACCTaGAGGTCAGTGTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VNLSRHVSSPRCLGREKGAFTAT*RSVFSS
Trigger: GGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGC...ACCTTTCTCTCGACCTAAACACCTGGGGCTGGAAACATGGCGGGAGAGATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR TCA 90 bp AATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATAAGACCAACAGGGACTaGAGACTCGGCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NPDFEVKGSGKTKPPSFHKTNRD*RLGSAL
Trigger: AAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTT...ATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGTCAAAGAACCACCGCTaGTCCCAGCAGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKSKNHR*SQQTVW
Trigger: CCACACTGTCTGCTGGGATCAGCGGTGGTTCTTTGA...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGCTGGGCAGAGTGTCTaGCTCACTGGAGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESAGQSV*LTGATV
Trigger: AACAGTAGCTCCAGTGAGTCAGACACTCTGCCCAGC...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCGGAGGCAGACAAAGGTaGGTGCCAAGTGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSGGRQR*VPSEEP
Trigger: TGGTTCCTCACTTGGCACTCACCTTTGTCTGCCTCC...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GCAGTCCAATGGGCTGAGGACAGAAGCAACTGCTGCTCTCATCTGCCTTCCATCACTCCAGATGTACCTTaGATACTGTTGAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: AVQWAEDRSNCCSHLPSITPDVP*ILLRAS
Trigger: ACTAGCTCTCAACAGTATTCAAGGTACATCTGGAGT...GATGGAAGGCAGATGAGAGCAGCAGTTGCTTCTGTCCTCAGCCCATTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp CCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCCCTCACTGTGTTTCTaGTGCCCTGAAACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: PWRKENKEFSPGHTDIRSPSLCF*CPETVE
Trigger: CTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGG...GCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GATCCCAGCAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGTGCTCAGATTATAGCTaGTGTTACCTTTTATTGAGT +
Preference number: 4 (lower is better)
Translates to: DPSRQCGTSPFLALGLEVCSDYS*CYLLLS
Trigger: ACTCAATAAAAGGTAACAGCAGCTATAATCTGAGCA...CACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATGTCCTTTTCACAAACTaGGGTTCCCCTGACATTGTA +
Preference number: 4 (lower is better)
Translates to: PLILRRRRHRIISPDNKYVLFTN*GSPDIV
Trigger: TACAATGTCAGGGGAACCCCAGTTTGTGAAAAGGAC...ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGCGTACTCCTCTATCTaGGGCTGTTACTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: NPDFEVKGSGKTKPPSFHAYSSI*GCYWHH
Trigger: GTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGC...ATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp ACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTAAGGTTGCCTCATGCTaGGCCTGCGTACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: TNQGIEERSTEATPGFNPKVASC*ACVLLY
Trigger: ATAGAGGAGTACGCAGGCCCAGCATGAGGCAACCTT...AGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTCTAGGCCGGGTCACGTaGGCAGGTTGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CISGVLVWLSLYNKGFFCLGRVT*AGWGWR
Trigger: CCTCCACCCCCAACCTGCCCACGTGACCCGGCCTAG...ACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp CAGCCCCAGGTGTTTAGGTCGAGAGAAAGGTCAGATATCTCAAGCCTGCTTATAAACTGCCCCCTAATCTaGAGAGAACAGCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: QPQVFRSRERSDISSLLINCPLI*REQPEW
Trigger: CCACTCAGGCTGTTCTCTCCAGATTAGGGGGCAGTT...TATAAGCAGGCTTGAGATATCTGACCTTTCTCTCGACCTAAACACCTGGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR TCA 90 bp CCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCCTGAAGAAGGTGAGTGCCAAGTaGGGAACCATAAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PLPTGSGKMEWALDTLLKKVSAK*GTIRSG
Trigger: ACCACTTCTTATGGTTCCTCACTTGGCACTCACCTT...CTTCAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCACTGGTCTTGAATTCCTaGCCTCGTGATCTACCTGCC +
Preference number: 4 (lower is better)
Translates to: KLSWRHMPFEYSNSAETPLVLNS*PRDLPA
Trigger: GGCAGGTAGATCACGAGGTCAGGAATTCAAGACCAG...TGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp TTCCAGCCCCAGGTGTTTAGGTCGAGAGAAAGGTCAGATATCTCAAGCCTGCTTAGTAGTACAGTAGTGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FQPQVFRSRERSDISSLLSSTVV*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACACTACTGTACTACT...AAGCAGGCTTGAGATATCTGACCTTTCTCTCGACCTAAACACCTGGGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCTCACTGTGTTTCTGCTaGCCTGAAACAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTSLCFC*PETVEA
Trigger: TGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGA...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGCCCTCACTGTGTTTCTaGTGCCCTGAAACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWPSLCF*CPETVE
Trigger: CTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGG...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGGACCATTCCAAAACCTaGGTTCTGTTTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NDRRESERLTAADHGKSVDHSKT*VLFCRS
Trigger: GCTTCTGCAAAACAGAACGCAGGTTTTGGAATGGTC...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp AGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAGGCGCTGTCTCGGGTaGCCCTTCGTGTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: RGFLYCISGVLVWLSLYNRRCLG*PFVSAI
Trigger: GATGGCTGACACGAAGGGGCACCCGAGACAGCGCCT...ATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR GCA 90 bp CTGCTTATAATGAAAGCCCTACTAAGTTGTCAGTGGGCGGCAATCCCAAATGGCCCTTCACAGGGCATTTaGATTTACCGCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLIMKALLSCQWAAIPNGPSQGI*IYRNLE
Trigger: CTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGG...GCCATTTGGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTCATTATAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR CCA 90 bp CCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCCACAGTCTAATGTGCTaGGCAGAGTGTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: PWRKENKEFSPGHTDIRSHSLMC*AECLTH
Trigger: GTGAGTCAGACACTCTGCCCAGCACATTAGACTGTG...GCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGGTCCTTTTCACAAACTaGGGTTCCCCTGACATTGTA +
Preference number: 4 (lower is better)
Translates to: NDRRESERLTAADHGKSVVLFTN*GSPDIV
Trigger: TACAATGTCAGGGGAACCCCAGTTTGTGAAAAGGAC...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAAATGAGGGAGCAGAACTaGAAAAGACCTTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: LQKPSLCFCCPETVEADKMREQN*KRPSSR
Trigger: CCTTGATGAAGGTCTTTTCCAGTTCTGCTCCCTCAT...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATCATTCCAGACACACATaGGTCTGCCATTATATTTGG +
Preference number: 4 (lower is better)
Translates to: PLILRRRRHRIISPDNKYHSRHT*VCHYIW
Trigger: CCAAATATAATGGCAGACCCATGTGTGTCTGGAATG...ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATGCTGGGCAGAGTGTCTaGCTCACTGGAGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYAGQSV*LTGATV
Trigger: AACAGTAGCTCCAGTGAGTCAGACACTCTGCCCAGC...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAATATCTCCGTTTGGGCTaGAGTCAATACTATGAACTG +
Preference number: 4 (lower is better)
Translates to: LQKPSLCFCCPETVEADKYLRLG*SQYYEL
Trigger: CAGTTCATAGTATTGACTTCAGCCCAAACGGAGATA...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATACTGGGGACTCTGAGTaGGAGGTCAGACGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: RGFLYCISGVLVWLSLYNTGDSE*EVRRWS
Trigger: CGACCAGCGTCTGACCTCTCACTCAGAGTCCCCAGT...ATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp AGCCTGCTTATAATGAAAGCCCTACTAAGTTGTCAGTGGGCGGCAATCCCAAATTGGCTGGAATCAGCTTaGAACAGAACCTGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLLIMKALLSCQWAAIPNWLESA*NRTCLA
Trigger: GGCCAAACAGGTTCTGTTTCAAGCTGATTCCAGCCA...ATTTGGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTCATTATAAGCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409646.5
CDS-3UTR TCA 90 bp TCTCCTCTAATGTCGTTCTGGTTCGTTGCCCCAGGTATAATCTGTAAATCTCTCCTTGTCTTCAACTCCTaGCCTCATGATCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: SPLMSFWFVAPGIICKSLLVFNS*PHDPTA
Trigger: GGCAGTCGGATCATGAGGTCAGGAGTTGAAGACAAG...GAGAGATTTACAGATTATACCTGGGGCAACGAACCAGAACGACATTAGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp CGCAGTGTTGAGGCCCTAAGGACAAAGCTCCTTCACAGGGCATTTGCATTTACCGAACTCCGTTCAACCTaGATGACGTCTAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: RSVEALRTKLLHRAFAFTELRST*MTSNPK
Trigger: TTTAGGATTAGACGTCATTCAGGTTGAACGGAGTTC...GGTAAATGCAAATGCCCTGTGAAGGAGCTTTGTCCTTAGGGCCTCAACACTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR GCA 90 bp TGTTACATCTGCATCCCAGCTCAAGAGCCTAACACCCAAATCAGCAGCTCAAAGACCTGCGTTCTGTTTTaGAGAAGCCCTCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: CYICIPAQEPNTQISSSKTCVLF*RSPHCV
Trigger: AACACAGTGAGGGCTTCTGCAAAACAGAACGCAGGT...CTTTGAGCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GGAAGACGTGCAGAAGCCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCCCTTCACAGGGCATTTaGATTTACCGCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRRAEANKNDRPLFSSNVPSQGI*IYRNLE
Trigger: CTCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGG...GACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGGCTTCTGCACGTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR CCA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCGAGTGTCTGACTCACTaGAGCTACTGTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTECLTH*SYCYIC
Trigger: GCAGATGTAACAGTAGCTCCAGTGAGTCAGACACTC...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTACAAGAAAAAGCACGTaGATCCACGGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESTRKST*IHGSCL
Trigger: CAAGCACGACCCGTGGATCCACGTGCTTTTTCTTGT...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCACCACCCTCATTCCATaGGGAATGACAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTTTLIP*GMTEEK
Trigger: TTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGT...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCCTCACAACAACCCTGTaGGGTAGGTATTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSLTTTL*GRYLLH
Trigger: ATGGAGCAAATACCTACCTCACAGGGTTGTTGTGAG...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp ATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGCTGGTCTTGAATTCCTaGCCTCGTGATCTACCTGCC +
Preference number: 4 (lower is better)
Translates to: IHKLSWRHMPFEYSNSAELVLNS*PRDLPA
Trigger: GGCAGGTAGATCACGAGGTCAGGAATTCAAGACCAG...CTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp ACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCAGGTTTTAATCCTCTTCGTCTTCTTCCTTaGCTCACTCTATGTCATGGT +
Preference number: 4 (lower is better)
Translates to: TNQGIEERSTEATPGFNPLRLLP*LTLCHG
Trigger: ACCATGACATAGAGTGAGGCAAGGAAGAAGACGAAG...AGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGACCTGCGTTCTGTTTTaGAGAAGCCCTCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKTCVLF*RSPHCV
Trigger: AACACAGTGAGGGCTTCTGCAAAACAGAACGCAGGT...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACCGTTCTGTCGGACGTTaGAGGTCCCGCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EYLFGCHCIIKASSVMFHRSVGR*RSRPFW
Trigger: CCAGAAGGGGCGGGACCTGCAACGTCCGACAGAACG...GTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR GCA 90 bp GGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAATGTACTCCCACCCTCTaGTTGCGGGCGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GFLYCISGVLVWLSLYNKCTPTL*LRAAAE
Trigger: TTCTGCTGCCGCCCGCAAGCAGAGGGTGGGAGTACA...TTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409960.6
CDS-3UTR CCA 90 bp TGGTTACCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCTCTAACCAGAGCCTTTaGTTACACAGCTATGAGGGA +
Preference number: 4 (lower is better)
Translates to: WLPLPTGSGKMEWALDTLSNQSL*LHSYEG
Trigger: TCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA...GAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGGTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCAGTGGTAGATCTCTGTaGAGTGCCATAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSSGRSL*SAIRTL
Trigger: GAGGGTTCTTATGGCACTCCACAGAGATCTACCACT...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAAGTGGTAGATCTCTGTaGAGTGCCATAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: NHPHSMRNDRRESERLTASGRSL*SAIRTL
Trigger: GAGGGTTCTTATGGCACTCCACAGAGATCTACCACT...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AGATACTCTCCTGAAGAGCTAGCTATTTTAAGGAAAGAGCAATTCAAGGCCATTGAGAAAGTGAACGCTTaGCAGCAGCTGACCACGGGA +
Preference number: 4 (lower is better)
Translates to: RYSPEELAILRKEQFKAIEKVNA*QQLTTG
Trigger: TCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTC...AATGGCCTTGAATTGCTCTTTCCTTAAAATAGCTAGCTCTTCAGGAGAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAACCACCCTCATTCCATaGGGAATGACAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: NHPHSMRNDRRESERLTATTLIP*GMTEEK
Trigger: TTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGT...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
CDS-3UTR TCA 90 bp GCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGAAGACCAACAGGGACTaGAGACTCGGCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AYPEYLFGCHCIIKASSVKTNRD*RLGSAL
Trigger: AAGGGCAGAGCCGAGTCTTCAGTCCCTGTTGGTCTT...CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR TCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTTTGGTTACACAGCTATaGGGGAGCAGAACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESLVTQL*GSRTGK
Trigger: TTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAA...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GCATTTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATAGTATACACTCTACTTaGCCCAAGATGATAAAACTG +
Preference number: 4 (lower is better)
Translates to: AFAFTATWRSVFSSGRLHSIHST*PKMIKL
Trigger: CAGTTTTATCATCTTGGGTCAAGTAGAGTGTATACT...ATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGTCTGCTTCAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMSASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGA...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp TTAGATATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTCTGGAAATCCTGACCTaGCACAGTCCTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LDIHKLSWRHMPFEYSNSLEILT*HSPPSP
Trigger: TGGGCTGGGAGGACTGTGTCAGGTCAGGATTTCCAG...AGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAATATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGAGGATTCCTCTACTaGATATCCGGAGTACTTGTT +
Preference number: 4 (lower is better)
Translates to: ILILRSREAGRQNHPHSMRGFLY*ISGVLV
Trigger: AACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR GCA 90 bp AATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATAAACACAGTCTAATGTaGTGGGCAGAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: NPDFEVKGSGKTKPPSFHKHSLM*WAECLT
Trigger: AGTCAGACACTCTGCCCAGCACATTAGACTGTGTTT...ATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCGTCAAGGTTGCCTCATaGTGGGCCTGCGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFVKVAS*WACVLL
Trigger: GAGGAGTACGCAGGCCCAGCATGAGGCAACCTTGAC...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR GCA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGCTTCGTCTTCTTCCTTaGCTCACTCTATGTCATGGT +
Preference number: 4 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKLRLLP*LTLCHG
Trigger: ACCATGACATAGAGTGAGGCAAGGAAGAAGACGAAG...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATTCACTGTGTTTCTGCTaGCCTGAAACAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYSLCFC*PETVEA
Trigger: TGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGA...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCAAACCCTCAAGGGGTTaGAGGTTCAGCTTTCACTTA +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSKPSRG*RFSFHL
Trigger: TAAGTGAAAGCTGAACCTGCAACCCCTTGAGGGTTT...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR GCA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCAACCTCTACCCAGAATaGTCAGATTATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTNLYPE*SDYSCC
Trigger: ACAGCAGCTATAATCTGAGCATTCTGGGTAGAGGTT...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445816.5
CDS-3UTR CCA 90 bp CCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCGATGGTGTTCAAGGGTaGGGAACAAAAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: PWRKENKEFSPGHTDIRSDGVQG*GTKITE
Trigger: TTCTGTGATTTTTGTTCCCCACCCTTGAACACCATC...GCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CCA 90 bp GGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCAACTCGGCTCTGCCCTTaGAGAAAGGAAAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: GVISVWAEVNTMNWKKWSTRLCP*RKENKE
Trigger: CTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGT...TGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp GAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACTCCCAGCAGACAGTGTaGCACCAGCCCTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: EYLFGCHCIIKASSVMFHSQQTV*HQPFPG
Trigger: GCCAGGAAAGGGCTGGTGCCACACTGTCTGCTGGGA...GTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CCA 90 bp ACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGGAGTGTCTGACTCACTaGAGCTACTGTTACATCTGC +
Preference number: 4 (lower is better)
Translates to: TQGVISVWAEVNTMNWKKECLTH*SYCYIC
Trigger: GCAGATGTAACAGTAGCTCCAGTGAGTCAGACACTC...CTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp CTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCACAGTCTAATGTGCTaGGCAGAGTGTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LWFLEDSSTAYPEYLFGCHSLMC*AECLTH
Trigger: GTGAGTCAGACACTCTGCCCAGCACATTAGACTGTG...ACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CCA 90 bp TGGTTACCCTTACCAACTGGTTCAGGTAAGATGGAGTGGGCCTTAGATACTCTCGGAGTTATCTCCGTTTaGGCTGAAGTCAATACTATG +
Preference number: 4 (lower is better)
Translates to: WLPLPTGSGKMEWALDTLGVISV*AEVNTM
Trigger: CATAGTATTGACTTCAGCCCAAACGGAGATAACTCC...GAGAGTATCTAAGGCCCACTCCATCTTACCTGAACCAGTTGGTAAGGGTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp ACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTCAGGTAAGATGGAGTaGGCCTTAGATACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQGVISVWAEVNTMNWKKSGKME*ALDTLL
Trigger: CAGGAGAGTATCTAAGGCCCACTCCATCTTACCTGA...CTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp TTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATACATGCGGGGACAGTTTaGGGTACTGACAAAGTCGCC +
Preference number: 4 (lower is better)
Translates to: LEDSSTAYPEYLFGCHCIHAGTV*GTDKVA
Trigger: GGCGACTTTGTCAGTACCCCAAACTGTCCCCGCATG...TATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
3UTR CAA 72 bp TATCTCAAGCCTGCTTATAATGAAAGCCCTACTAAGTaGTCAGTGGGCGGCAATCCCAAATGGCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: YLKPAYNESPTK*SVGGNPKWLES
Trigger: TGATTCCAGCCATTTGGGATTGCCGCCCACTGACAACTTAGTAGGGCTTTCATTATAAGCAGGCTTGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409646.5
ENST00000448830.2
CDS-3UTR TCA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCATATCTCCGTTTGGGCTaGAGTCAATACTATGAACTG +
Preference number: 4 (lower is better)
Translates to: NHPHSMRNDRRESERLTAYLRLG*SQYYEL
Trigger: CAGTTCATAGTATTGACTTCAGCCCAAACGGAGATA...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCATTGGTTACACAGCTATaGGGGAGCAGAACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GVISVWAEVNTMNWKKWSLVTQL*GSRTGK
Trigger: TTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAA...TGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATCTGAAGACTCGGCTCTaGCCTTGGAGAAAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYLKTRL*PWRKEN
Trigger: ATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTCAG...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCAGTTCAGCGTTTGGCTaGTGTACTCCCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFSSAFG*CTPTLC
Trigger: GCAGAGGGTGGGAGTACAGCAGCCAAACGCTGAACT...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409960.6
CDS-3UTR GCA 90 bp ATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGGCCACACCTTCTTTCTaGTCCAGTTCTAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: IHKLSWRHMPFEYSNSAEATPSF*SSSRSS
Trigger: AGAGCTTCTAGAACTGGAGCAGAAAGAAGGTGTGGC...CTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409617.6
CDS-3UTR CCA 90 bp TTTAAGGAAAGAGCAATTCAAGGCCATTCCAGACACACATGGGTCTGCCATTATACTCGGCTCTGCCCTTaGAGAAAGGAAAATAAGGAG +
Preference number: 4 (lower is better)
Translates to: FKERAIQGHSRHTWVCHYTRLCP*RKENKE
Trigger: CTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAGT...ATAATGGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AGATCTCTGTGGAGTGCCATAAGAACCCTCAAGAGCCTTAACAAAGGTAGTTGGGGAGTTATCTCCGTTTaGGCTGAAGTCAATACTATG +
Preference number: 4 (lower is better)
Translates to: RSLWSAIRTLKSLNKGSWGVISV*AEVNTM
Trigger: CATAGTATTGACTTCAGCCCAAACGGAGATAACTCC...CCAACTACCTTTGTTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp GAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACGAGAAAGTGAACGCTTaGCAGCAGCTGACCACGGGA +
Preference number: 4 (lower is better)
Translates to: EYLFGCHCIIKASSVMFHEKVNA*QQLTTG
Trigger: TCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTC...GTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR TCA 90 bp GGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGACAGTTTGGGGTACTaGCAAAGTCGCCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GFLYCISGVLVWLSLYNKDSLGY*QSRPVV
Trigger: GACTACAGGGCGACTTTGTCAGTACCCCAAACTGTC...TTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR TCA 90 bp TTAGATATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTCTTGTCTTCAACTCCTaGCCTCATGATCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: LDIHKLSWRHMPFEYSNSLVFNS*PHDPTA
Trigger: GGCAGTCGGATCATGAGGTCAGGAGTTGAAGACAAG...AGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAATATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp ATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACCTGGCCCAACCTTTaGTATCTTCTAGTCTTACCA +
Preference number: 4 (lower is better)
Translates to: IHKLSWRHMPFEYSNSAETWPNL*YLLVLP
Trigger: TGGTAAGACTAGAAGATATCAAAGGTTGGGCCAGGT...CTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp AAGCCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCGTTCTGGTTCGTTACCTGGCCCAACCTTTaGTATCTTCTAGTCTTACCA +
Preference number: 4 (lower is better)
Translates to: KPIKTTGLFSPLMSFWFVTWPNL*YLLVLP
Trigger: TGGTAAGACTAGAAGATATCAAAGGTTGGGCCAGGT...AACGAACCAGAACGACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR TCA 90 bp ACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAGATGTACCTTGAATACATGAGGGTAAGGCCTTaGAACTCTTGGAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: TCHLSTVTLLRLQMYLEYMRVRP*NSWRNV
Trigger: GACATTTCTCCAAGAGTTTCAAGGCCTTACCCTCAT...GTATTCAAGGTACATCTGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTTTCCTACAACTATTCTaGCTTCCACTTCGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESFLQLF*LPLRLL
Trigger: AAGAAGACGAAGTGGAAGGCAGAATAGTTGTAGGAA...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp GGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGGTCACATCTTACCAAAGTCTaGACAGCCACTTATATGCTG +
Preference number: 4 (lower is better)
Translates to: GVISVWAEVNTMNWKKWSHLTKV*TATYML
Trigger: CAGCATATAAGTGGCTGTGCAGACTTTGGTAAGATG...TGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCTGTGAGGTAGGTATTTaGTCCATTTTACAAATGGAG +
Preference number: 4 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTCEVGI*SILQME
Trigger: CTCCATTTGTAAAATGGAGCAAATACCTACCTCACA...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAGTCAATACTATGAACTaGAAGAAGTGGTCAAACACA +
Preference number: 4 (lower is better)
Translates to: REAGRQNHPHSMRNDRREVNTMN*KKWSNT
Trigger: TGTGTTTGACCACTTCTTCCAGTTCATAGTATTGAC...TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp AAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTGCTGAGACTCCAAGTATACACTCTACTTaGCCCAAGATGATAAAACTG +
Preference number: 4 (lower is better)
Translates to: KLSWRHMPFEYSNSAETPSIHST*PKMIKL
Trigger: CAGTTTTATCATCTTGGGTCAAGTAGAGTGTATACT...TGGAGTCTCAGCAGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp AGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATCTGAAGACTCGGCTCTaGCCTTGGAGAAAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: RGFLYCISGVLVWLSLYNLKTRL*PWRKEN
Trigger: ATTTTCCTTTCTCCAAGGGCAGAGCCGAGTCTTCAG...ATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR GCA 90 bp TTAATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCTGTGAGGTAGGTATTTaGTCCATTTTACAAATGGAG +
Preference number: 4 (lower is better)
Translates to: LILILRSREAGRQNHPHSCEVGI*SILQME
Trigger: CTCCATTTGTAAAATGGAGCAAATACCTACCTCACA...GGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR GCA 90 bp CTATGGTTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCTGAGATGGGAGGATTaGTTGAATCCAGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: LWFLEDSSTAYPEYLFGCLRWED*LNPGIQ
Trigger: TTGAATTCCTGGATTCAAGCAATCCTCCCATCTCAG...ACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CCA 90 bp GAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGTCAATACTATGAACTaGAAGAAGTGGTCAAACACA +
Preference number: 4 (lower is better)
Translates to: EAGRQNHPHSMRNDRRESVNTMN*KKWSNT
Trigger: TGTGTTTGACCACTTCTTCCAGTTCATAGTATTGAC...ACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR TCA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCAAGGTGAGTGCCAAGTaGGGAACCATAAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFKVSAK*GTIRSG
Trigger: ACCACTTCTTATGGTTCCTCACTTGGCACTCACCTT...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR TCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGACTCAAGGTGGCCTATaGACTGGGTTCATAACCTAC +
Preference number: 4 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMTQGGL*TGFITY
Trigger: GTAGGTTATGAACCCAGTTCATAGGCCACCTTGAGT...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp TACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGTCAGAATGAGTAGTACAGTAGTGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: YKSLLCGIQSKNYPRVRMSSTVV*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACACTACTGTACTACT...CATTCTGACTCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAATGAGGGTAAGGCCTTaGAACTCTTGGAGAAATGTC +
Preference number: 4 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRMRVRP*NSWRNV
Trigger: GACATTTCTCCAAGAGTTTCAAGGCCTTACCCTCAT...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCGCAGACAAAGGTGAGTaGCAAGTGAGGAACCATAAG +
Preference number: 4 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFADKGE*QVRNHK
Trigger: CTTATGGTTCCTCACTTGGCACTCACCTTTGTCTGC...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CCA 90 bp GCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGTCTAACCAGAGCCTTTaGTTACACAGCTATGAGGGA +
Preference number: 4 (lower is better)
Translates to: AYPEYLFGCHCIIKASSVSNQSL*LHSYEG
Trigger: TCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA...CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR TCA 90 bp TGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTACCACCCTCATTCCATaGGGAATGACAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: CISGVLVWLSLYNKGFFCTTLIP*GMTEEK
Trigger: TTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGT...ACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR GCA 90 bp ACACAGGGAGTTATCTCCGTTTGGGCTGAAGTCAATACTATGAACTGGAAGAAGTGCTCAGATTATAGCTaGTGTTACCTTTTATTGAGT +
Preference number: 4 (lower is better)
Translates to: TQGVISVWAEVNTMNWKKCSDYS*CYLLLS
Trigger: ACTCAATAAAAGGTAACAGCAGCTATAATCTGAGCA...CTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGGAGATAACTCCCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CCA 90 bp GCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGGATGGTGTTCAAGGGTaGGGAACAAAAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: AYPEYLFGCHCIIKASSVDGVQG*GTKITE
Trigger: TTCTGTGATTTTTGTTCCCCACCCTTGAACACCATC...CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS-3UTR CCA 90 bp TGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTATGAGGGAGCAGAACTaGAAAAGACCTTCATCAAGG +
Preference number: 4 (lower is better)
Translates to: CISGVLVWLSLYNKGFFCMREQN*KRPSSR
Trigger: CCTTGATGAAGGTCTTTTCCAGTTCTGCTCCCTCAT...ACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR TCA 90 bp GAACACAGGTACAAGTCACTGTTGTGTGGGATACAATCTAAGAATTATCCTAGAGGTATTCTTCTACACTaGTTTTTCATACAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: EHRYKSLLCGIQSKNYPRGILLH*FFIQVC
Trigger: GCACACCTGTATGAAAAATCAGTGTAGAAGAATACC...TCTAGGATAATTCTTAGATTGTATCCCACACAACAGTGACTTGTACCTGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR TCA 90 bp TTAGATATTCATAAGCTGTCTTGGAGACACATGCCATTTGAGTACAGTAACTCTACTCCAGATGTACCTTaGATACTGTTGAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LDIHKLSWRHMPFEYSNSTPDVP*ILLRAS
Trigger: ACTAGCTCTCAACAGTATTCAAGGTACATCTGGAGT...AGAGTTACTGTACTCAAATGGCATGTGTCTCCAAGACAGCTTATGAATATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409617.6
ENST00000448830.2
CDS-3UTR GCA 90 bp TGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTAGAGGATTCCTCTACTaGATATCCGGAGTACTTGTT +
Preference number: 4 (lower is better)
Translates to: CISGVLVWLSLYNKGFFCRGFLY*ISGVLV
Trigger: AACAAGTACTCCGGATATGCAGTAGAGGAATCCTCT...ACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS-3UTR GCA 90 bp GAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACGACCATTCCAAAACCTaGGTTCTGTTTTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: EYLFGCHCIIKASSVMFHDHSKT*VLFCRS
Trigger: GCTTCTGCAAAACAGAACGCAGGTTTTGGAATGGTC...GTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR GCA 90 bp TGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTCATCTTACCAAAGTCTaGACAGCCACTTATATGCTG +
Preference number: 4 (lower is better)
Translates to: CISGVLVWLSLYNKGFFCHLTKV*TATYML
Trigger: CAGCATATAAGTGGCTGTGCAGACTTTGGTAAGATG...ACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CCA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCGATGGTGTTCAAGGGTaGGGAACAAAAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFDGVQG*GTKITE
Trigger: TTCTGTGATTTTTGTTCCCCACCCTTGAACACCATC...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
3UTR CAA 72 bp GGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTaGTCATTGTATAATAAAGGCTTCTTCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: GFLYCISGVLVW*SLYNKGFFCDV
Trigger: AACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS-3UTR CCA 90 bp GAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACCATTCCAGACACACATaGGTCTGCCATTATATTTGG +
Preference number: 4 (lower is better)
Translates to: EYLFGCHCIIKASSVMFHHSRHT*VCHYIW
Trigger: CCAAATATAATGGCAGACCCATGTGTGTCTGGAATG...GTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249786.9
3UTR CAA 72 bp TTCTTAGAGGATTCCTCTACTGCATATCCGGAGTACTaGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLEDSSTAYPEY*FGCHCIIKASS
Trigger: AGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS CCA 90 bp GGGTCACGTGGGCAGGTTGGGGGTGGAGGGGTGCGGCTGGCGATGTaGCGCTCCCGCGGGCTCGAGCACGTGACCGTGCAGAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: GSRGQVGGGGVRLAM*RSRGLEHVTVQSDL
Trigger: GAGGTCACTCTGCACGGTCACGTGCTCGAGCCCGCGGGAGCGCCACATCGCCAGCCGCACCCCTCCACCCCCAACCTGCCCACGTGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 90 bp ACGGGCCTGGAGAAACTAGGCCGGGTCACGTGGGCAGGTTGGGGGTaGAGGGGTGCGGCTGGCGATGTGGCGCTCCCGCGGGCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: TGLEKLGRVTWAGWG*RGAAGDVALPRARA
Trigger: TGCTCGAGCCCGCGGGAGCGCCACATCGCCAGCCGCACCCCTCCACCCCCAACCTGCCCACGTGACCCGGCCTAGTTTCTCCAGGCCCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 90 bp GTAGGGACGGGCCTGGAGAAACTAGGCCGGGTCACGTGGGCAGGTTaGGGGTGGAGGGGTGCGGCTGGCGATGTGGCGCTCCCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: VGTGLEKLGRVTWAG*GWRGAAGDVALPRA
Trigger: AGCCCGCGGGAGCGCCACATCGCCAGCCGCACCCCTCCACCCCCAACCTGCCCACGTGACCCGGCCTAGTTTCTCCAGGCCCGTCCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 90 bp CCGGGGTGGGTAAGTGGCGGAGGGTCGCAGGCGGAGCGCTCAGCGTaGGGCGGGGCTTCCCGAGTGAGACGTAGGGACGGGCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PGWVSGGGSQAERSA*GGASRVRRRDGPGE
Trigger: TTCTCCAGGCCCGTCCCTACGTCTCACTCGGGAAGCCCCGCCCCACGCTGAGCGCTCCGCCTGCGACCCTCCGCCACTTACCCACCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS TCA 90 bp GAGGGTCGCAGGCGGAGCGCTCAGCGTGGGGCGGGGCTTCCCGAGTaGGACGTAGGGACGGGCCTGGAGAAACTAGGCCGGGTCACGTGG +
Preference number: 5 (lower is better)
Translates to: EGRRRSAQRGAGLPE*DVGTGLEKLGRVTW
Trigger: CCACGTGACCCGGCCTAGTTTCTCCAGGCCCGTCCCTACGTCTCACTCGGGAAGCCCCGCCCCACGCTGAGCGCTCCGCCTGCGACCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 90 bp CGCACCGCGGAAGATCCGGGAGGGCCTATGCCTAACCCGGGAGGGTaGTCCCGTGAAGTAGCCGTGGGCAAAGGGCTCGATTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: RTAEDPGGPMPNPGG*SREVAVGKGLDFRA
Trigger: TGCCCGGAAATCGAGCCCTTTGCCCACGGCTACTTCACGGGACCACCCTCCCGGGTTAGGCATAGGCCCTCCCGGATCTTCCGCGGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403425.5
ENST00000430901.1
ENST00000475927.5
CDS TCA 90 bp GGCGATGTGGCGCTCCCGCGGGCTCGAGCACGTGACCGTGCAGAGTaGCCTCATGCGGGGACAGTTTGGGGTACTGACAAAGTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: GDVALPRARARDRAE*PHAGTVWGTDKVAL
Trigger: CAGGGCGACTTTGTCAGTACCCCAAACTGTCCCCGCATGAGGTCACTCTGCACGGTCACGTGCTCGAGCCCGCGGGAGCGCCACATCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 90 bp TCAGCCATCCTCTGGTCTCTCGGGTCTCCGAAGCTCGGGGCTAACTaGGCGCGAACCGCTGAGCCCGCCTACCAACCAGGCCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SAILWSLGSPKLGAN*ARTAEPAYQPGPFS
Trigger: GGAGAAAGGGCCTGGTTGGTAGGCGGGCTCAGCGGTTCGCGCCCAGTTAGCCCCGAGCTTCGGAGACCCGAGAGACCAGAGGATGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381359.5
ENST00000474290.1
CDS TCA 90 bp GCTCCCATTGGACAAGAAAAAGCACGTGGATCCACGGGTCGTGCTTaGGCCGGGGTGGGTAAGTGGCGGAGGGTCGCAGGCGGAGCGCTC +
Preference number: 5 (lower is better)
Translates to: APIGQEKARGSTGRA*AGVGKWRRVAGGAL
Trigger: GAGCGCTCCGCCTGCGACCCTCCGCCACTTACCCACCCCGGCTCAAGCACGACCCGTGGATCCACGTGCTTTTTCTTGTCCAATGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS-3UTR CAA 90 bp TCCCTGGGACAAGGATGGTGGGTGCCAAGGCCGGCCCCAGCCCCGGCACCTCCCTCCTTCACAGGGCATTaGCATTTACCGCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: SLGQGWWVPRPAPAPAPPSFTGH*HLPQPG
Trigger: TCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGA...GGGAGGTGCCGGGGCTGGGGCCGGCCTTGGCACCCACCATCCTTGTCCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR CAA 90 bp GCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCTACCCCCCAGCCCCTTATCTaGAGGCGCCGCCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: AQNHRTNQGIEERSTEATPQPLI*RRRRHR
Trigger: GCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGGG...GGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS TCA 90 bp AGCTACGGAAGGTCAAAGCCGGCGCCTCGCCGGTGGTGTTTAGGGTaGACGGAAAGAAAAGGGCAAGGAGAAGGGGGCTCGGTGCTCACG +
Preference number: 5 (lower is better)
Translates to: SYGRSKPAPRRWCLG*TERKGQGEGGSVLT
Trigger: CGTGAGCACCGAGCCCCCTTCTCCTTGCCCTTTTCTTTCCGTTCACCCTAAACACCACCGGCGAGGCGCCGGCTTTGACCTTCCGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402131.5
ENST00000403425.5
ENST00000430901.1
ENST00000475927.5
CDS-3UTR CAA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCCCCCAGCCCCTTATCTaGAGGCGCCGCCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGPQPLI*RRRRHR
Trigger: GCGGTGGCGGCGGCGCCTCAAGATAAGGGGCTGGGG...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGGATTGTACTCCTAGAGTaGGCTCAAGGGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QTVWHQPFPGSWAGSGGGIVLLE*AQGELS
Trigger: GGACAGCTCCCCTTGAGCCAACTCTAGGAGTACAAT...CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp CCCCTTATCTTGAGGCGCCGCCGCCACCGCATCATATCCCCAGATAACAAATATGCCCTTTCCTGGCTCTaGGGCTGGAAGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PLILRRRRHRIISPDNKYALSWL*GWKWGW
Trigger: CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGC...ATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCTCAAGATAAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp CAGACAGTGTGGCACCAGCCCTTTCCTGGCTCTTGGGCTGGAAGTGGGGGTGGGAACCTGCGTTCTGTTTaGCAGAAGCCCTCACTGTGT +
Preference number: 5 (lower is better)
Translates to: QTVWHQPFPGSWAGSGGGNLRSV*QKPSLC
Trigger: ACACAGTGAGGGCTTCTGCAAAACAGAACGCAGGTT...CCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS TCA 90 bp CCAAATTCAGGGTCGCTGGGGAAACTAAGGCAGGACTGGGGACTCTaGGTGAGAGGTCAGACGCTGGTCGCGGACTCTTTCTCCCGAGAA +
Preference number: 5 (lower is better)
Translates to: PNSGSLGKLRQDWGL*VRGQTLVADSFSRE
Trigger: TTCTCGGGAGAAAGAGTCCGCGACCAGCGTCTGACCTCTCACTCAGAGTCCCCAGTCCTGCCTTAGTTTCCCCAGCGACCCTGAATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381359.5
ENST00000474290.1
CDS GCA 90 bp CAGGCCCTTTCTCCCGCCCCTCTGCGGCTGAAACCCTCAAGGGGTTaGAGGTTCAGCTTTCACTTAGAGACAGCAACTCCAAATTCAGGG +
Preference number: 5 (lower is better)
Translates to: QALSPAPLRLKPSRG*RFSFHLETATPNSG
Trigger: CCCTGAATTTGGAGTTGCTGTCTCTAAGTGAAAGCTGAACCTGCAACCCCTTGAGGGTTTCAGCCGCAGAGGGGCGGGAGAAAGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381359.5
ENST00000474290.1
CDS-3UTR CAA 90 bp CCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATATAAGAAGCGCCCTTTCCTGGCTCTaGGGCTGGAAGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PWRKENKEFSPGHTDIRSALSWL*GWKWGW
Trigger: CCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGC...GCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCAGAGAAAGTGAACGCTaGACAGCAGCTGACCACGGG +
Preference number: 5 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGRESER*TAADHG
Trigger: CCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCT...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
CDS-3UTR CAA 90 bp GACAGGCCTCTTTTCTCCTCTAATGTCGTTCTGGTTCGTTGCCCCAGGTATAATAAACAGAACCTCTGCTaGCGGGCGGCAGCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: DRPLFSSNVVLVRCPRYNKQNLC*RAAAES
Trigger: GCTTTCTGCTGCCGCCCGCAAGCAGAGGTTCTGTTT...ATTATACCTGGGGCAACGAACCAGAACGACATTAGAGGAGAAAAGAGGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409291.5
CDS-3UTR CAA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGAGAAAGTGAACGCTaGACAGCAGCTGACCACGGG +
Preference number: 5 (lower is better)
Translates to: ILILRSREAGRQNHPHSMRESER*TAADHG
Trigger: CCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCT...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
CDS-3UTR CAA 90 bp CGGCTCTGCCCTTGGAGAAAGGAAAATAAGGAGTTCAGCCCTGGGCACACGGATGTTTTAATCCTGATTTaGAGGTCAAGGGAAGCGGGA +
Preference number: 5 (lower is better)
Translates to: RLCPWRKENKEFSPGHTDVLILI*RSREAG
Trigger: TCCCGCTTCCCTTGACCTCAAAATCAGGATTAAAAC...ATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGGGAGCCGGCTCCCATaGGACAAGAAAAAGCACGTG +
Preference number: 5 (lower is better)
Translates to: NHPHSMRNDRRESERLTAGSRLP*DKKKHV
Trigger: CACGTGCTTTTTCTTGTCCAATGGGAGCCGGCTCCC...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CAA 90 bp TTGCATTTACCGCAACCTGGAGGTCAGTGTTCTCTTCCGGACGTCTCCATTCTGTCCTTCACAGGGCATTaGCATTTACCGCAACCTGGA +
Preference number: 5 (lower is better)
Translates to: LHLPQPGGQCSLPDVSILSFTGH*HLPQPG
Trigger: TCCAGGTTGCGGTAAATGCAAATGCCCTGTGAAGGA...CAGAATGGAGACGTCCGGAAGAGAACACTGACCTCCAGGTTGCGGTAAATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409291.5
ENST00000448830.2
CDS-3UTR CAA 90 bp CCAATAAAAACGACAGGCCTCTTTTCTCCTCTAATGTCGTTCTGGTTCGTTGCCGTAATAGCACTCTGCTaGCGGGCGGCAGCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: PIKTTGLFSPLMSFWFVAVIALC*RAAAES
Trigger: GCTTTCTGCTGCCGCCCGCAAGCAGAGTGCTATTAC...GGCAACGAACCAGAACGACATTAGAGGAGAAAAGAGGCCTGTCGTTTTTATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448830.2
CDS-3UTR CAA 90 bp TTGCAGAAGCCCTCACTGTGTTTCTGCTGCCCTGAAACAGTGGAGGCAGACAAAGAGCAGCAGGATTTTTaGGCCAACTTTCAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: LQKPSLCFCCPETVEADKEQQDF*ANFQAD
Trigger: GTCTGCTTGAAAGTTGGCCAAAAAATCCTGCTGCTC...TTTGTCTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp CACACGGATATAAGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGAGAGAAAGTGAACGCTaGACAGCAGCTGACCACGGG +
Preference number: 5 (lower is better)
Translates to: HTDIRSPEPQNKPGHRRKRESER*TAADHG
Trigger: CCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCT...CTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCTTATATCCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp AGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAACCTGCGTTCTGTTTaGCAGAAGCCCTCACTGTGT +
Preference number: 5 (lower is better)
Translates to: REAGRQNHPHSMRNDRRENLRSV*QKPSLC
Trigger: ACACAGTGAGGGCTTCTGCAAAACAGAACGCAGGTT...TTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp TTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATATCGTTCTGTCGGACGTaGCAGGTCCCGCCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LEDSSTAYPEYLFGCHCISFCRT*QVPPLL
Trigger: CAGAAGGGGCGGGACCTGCAACGTCCGACAGAACGA...TATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CAA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGAGAGTTCTCCCTTTTTaGGTGGGAAAGGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: ILILRSREAGRQNHPHSMRVLPF*VGKGSH
Trigger: ATGACTGCCCTTTCCCACCAAAAAAGGGAGAACTCT...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR CAA 90 bp GAAAGGTCAGATATCTCAAGCCTGCTTATAATGAAAGCCCTACTAAGTTGTCAGGTGTACTTTCTCTGCTaGCGGGCGGCAGCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: ERSDISSLLIMKALLSCQVYFLC*RAAAES
Trigger: GCTTTCTGCTGCCGCCCGCAAGCAGAGAAAGTACAC...CTGACAACTTAGTAGGGCTTTCATTATAAGCAGGCTTGAGATATCTGACCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409646.5
CDS-3UTR CAA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCGCATATCCGGAGTACTaGTTTGGTTGTCATTGTATA +
Preference number: 5 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGAYPEY*FGCHCI
Trigger: TATACAATGACAACCAAACAAGTACTCCGGATATGC...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR CAA 90 bp ATCCTGATTTTGAGGTCAAGGGAAGCGGGAAGACAAAACCACCCTCATTCCATGGTTTTAATCCTGATTTaGAGGTCAAGGGAAGCGGGA +
Preference number: 5 (lower is better)
Translates to: ILILRSREAGRQNHPHSMVLILI*RSREAG
Trigger: TCCCGCTTCCCTTGACCTCAAAATCAGGATTAAAAC...CATGGAATGAGGGTGGTTTTGTCTTCCCGCTTCCCTTGACCTCAAAATCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000445816.5
CDS-3UTR CAA 90 bp TCTAACCAGAGCCTTTGGTTACACAGCTATGAGGGAGCAGAACTGGAAAAGACCGTTTTAATCCTGATTTaGAGGTCAAGGGAAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SNQSLWLHSYEGAELEKTVLILI*RSREAG
Trigger: TCCCGCTTCCCTTGACCTCAAAATCAGGATTAAAAC...GGTCTTTTCCAGTTCTGCTCCCTCATAGCTGTGTAACCAAAGGCTCTGGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp AATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCTGACCACGGGAAGTCGGTGGGAGTACTTGTTTGGTaGTCATTGTATAATAAAGGC +
Preference number: 5 (lower is better)
Translates to: NDRRESERLTAADHGKSVGVLVW*SLYNKG
Trigger: GCCTTTATTATACAATGACAACCAAACAAGTACTCC...CACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR CAA 90 bp AGAAGCCCAGAACCACAGAACAAACCAGGGCATAGAAGAAAGGAGCACAGAGGCGGAGTACTTGTTTGGTaGTCATTGTATAATAAAGGC +
Preference number: 5 (lower is better)
Translates to: RSPEPQNKPGHRRKEHRGGVLVW*SLYNKG
Trigger: GCCTTTATTATACAATGACAACCAAACAAGTACTCC...GCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTTGTTCTGTGGTTCTGGGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS GCA 90 bp GGTTTCAGCCAGTTCTGTGTTACGAGTACTCTACTACTAAACTTGTaGTTACTTAGGACCACCTCTCAGCCACTTATTTGGACACGAGTT +
Preference number: 5 (lower is better)
Translates to: GFSQFCVTSTLLLNL*LLRTTSQPLIWTRV
Trigger: AACTCGTGTCCAAATAAGTGGCTGAGAGGTGGTCCTAAGTAAGCACAAGTTTAGTAGTAGAGTACTCGTAACACAGAACTGGCTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630046.2
ENST00000674451.1
CDS-3UTR CAA 90 bp TTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATTGTACTCCTAGAGTaGGCTCAAGGGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LEDSSTAYPEYLFGCHCIIVLLE*AQGELS
Trigger: GGACAGCTCCCCTTGAGCCAACTCTAGGAGTACAAT...TATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CAA 90 bp AACCACCCTCATTCCATGAGGAATGACAGAAGAGAAAGTGAACGCTTGACAGCAGCATATCCGGAGTACTaGTTTGGTTGTCATTGTATA +
Preference number: 5 (lower is better)
Translates to: NHPHSMRNDRRESERLTAAYPEY*FGCHCI
Trigger: TATACAATGACAACCAAACAAGTACTCCGGATATGC...TGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000381359.5
CDS-3UTR CAA 90 bp ACCGCATCATATCCCCAGATAACAAATATCCTCCAGTCTAAGTCCTTTTCACAAGAGCAGCAGGATTTTTaGGCCAACTTTCAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: TASYPQITNILQSKSFSQEQQDF*ANFQAD
Trigger: GTCTGCTTGAAAGTTGGCCAAAAAATCCTGCTGCTC...TTGTGAAAAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249786.9
ENST00000445816.5
CDS-3UTR CAA 90 bp AGATACTCTCCTGAAGAGCTAGCTATTTTAAGGAAAGAGCAATTCAAGGCCATTAGAGTTCTCCCTTTTTaGGTGGGAAAGGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: RYSPEELAILRKEQFKAIRVLPF*VGKGSH
Trigger: ATGACTGCCCTTTCCCACCAAAAAAGGGAGAACTCT...AATGGCCTTGAATTGCTCTTTCCTTAAAATAGCTAGCTCTTCAGGAGAGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249786.9
CDS-3UTR CAA 90 bp TTAGAGGATTCCTCTACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAGAGCAGCAGGATTTTTaGGCCAACTTTCAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: LEDSSTAYPEYLFGCHCIEQQDF*ANFQAD
Trigger: GTCTGCTTGAAAGTTGGCCAAAAAATCCTGCTGCTC...TATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS-3UTR CAA 90 bp GCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGGAGCAGCAGGATTTTTaGGCCAACTTTCAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: AYPEYLFGCHCIIKASSVEQQDF*ANFQAD
Trigger: GTCTGCTTGAAAGTTGGCCAAAAAATCCTGCTGCTC...CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS-3UTR CAA 90 bp GCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGGCTGAGATGGGAGGATaGCTTGAATCCAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: AYPEYLFGCHCIIKASSVAEMGG*LESRNS
Trigger: TGAATTCCTGGATTCAAGCAATCCTCCCATCTCAGC...CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CAA 90 bp TACTGCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCAGAGTTCTCCCTTTTTaGGTGGGAAAGGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: YCISGVLVWLSLYNKGFFRVLPF*VGKGSH
Trigger: ATGACTGCCCTTTCCCACCAAAAAAGGGAGAACTCT...GAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS-3UTR CAA 90 bp GCATATCCGGAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGAGATGGGAGGATTGCTaGAATCCAGGAATTCAAAGT +
Preference number: 5 (lower is better)
Translates to: AYPEYLFGCHCIIKASSVRWEDC*NPGIQS
Trigger: ACTTTGAATTCCTGGATTCAAGCAATCCTCCCATCT...CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS-3UTR CAA 90 bp GAGTACTTGTTTGGTTGTCATTGTATAATAAAGGCTTCTTCTGTGATGTTTCACGCATATCCGGAGTACTaGTTTGGTTGTCATTGTATA +
Preference number: 5 (lower is better)
Translates to: EYLFGCHCIIKASSVMFHAYPEY*FGCHCI
Trigger: TATACAATGACAACCAAACAAGTACTCCGGATATGC...GTGAAACATCACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249786.9
ENST00000381359.5
ENST00000409960.6
CDS CCA 72 bp GAGAAACTAGGCCGGGTCACGTGGGCAGGTTGGGGGTaGAGGGGTGCGGCTGGCGATGTGGCGCTCCCGCGG +
Preference number: 6 (lower is better)
Translates to: EKLGRVTWAGWG*RGAAGDVALPR
Trigger: CCGCGGGAGCGCCACATCGCCAGCCGCACCCCTCCACCCCCAACCTGCCCACGTGACCCGGCCTAGTTTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 72 bp GTAAGTGGCGGAGGGTCGCAGGCGGAGCGCTCAGCGTaGGGCGGGGCTTCCCGAGTGAGACGTAGGGACGGG +
Preference number: 6 (lower is better)
Translates to: VSGGGSQAERSA*GGASRVRRRDG
Trigger: CCCGTCCCTACGTCTCACTCGGGAAGCCCCGCCCCACGCTGAGCGCTCCGCCTGCGACCCTCCGCCACTTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS TCA 72 bp AGGCGGAGCGCTCAGCGTGGGGCGGGGCTTCCCGAGTaGGACGTAGGGACGGGCCTGGAGAAACTAGGCCGG +
Preference number: 6 (lower is better)
Translates to: RRSAQRGAGLPE*DVGTGLEKLGR
Trigger: CCGGCCTAGTTTCTCCAGGCCCGTCCCTACGTCTCACTCGGGAAGCCCCGCCCCACGCTGAGCGCTCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 72 bp GGCCTGGAGAAACTAGGCCGGGTCACGTGGGCAGGTTaGGGGTGGAGGGGTGCGGCTGGCGATGTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: GLEKLGRVTWAG*GWRGAAGDVAL
Trigger: GAGCGCCACATCGCCAGCCGCACCCCTCCACCCCCAACCTGCCCACGTGACCCGGCCTAGTTTCTCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 72 bp GTAGGGACGGGCCTGGAGAAACTAGGCCGGGTCACGTaGGCAGGTTGGGGGTGGAGGGGTGCGGCTGGCGAT +
Preference number: 6 (lower is better)
Translates to: VGTGLEKLGRVT*AGWGWRGAAGD
Trigger: ATCGCCAGCCGCACCCCTCCACCCCCAACCTGCCCACGTGACCCGGCCTAGTTTCTCCAGGCCCGTCCCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS TCA 72 bp GGCTGGCGATGTGGCGCTCCCGCGGGCTCGAGCACGTaGCCGTGCAGAGTGACCTCATGCGGGGACAGTTTG +
Preference number: 6 (lower is better)
Translates to: GWRCGAPAGSST*PCRVTSCGDSL
Trigger: CAAACTGTCCCCGCATGAGGTCACTCTGCACGGTCACGTGCTCGAGCCCGCGGGAGCGCCACATCGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 72 bp CTCTGGTCTCTCGGGTCTCCGAAGCTCGGGGCTAACTaGGCGCGAACCGCTGAGCCCGCCTACCAACCAGGC +
Preference number: 6 (lower is better)
Translates to: LWSLGSPKLGAN*ARTAEPAYQPG
Trigger: GCCTGGTTGGTAGGCGGGCTCAGCGGTTCGCGCCCAGTTAGCCCCGAGCTTCGGAGACCCGAGAGACCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381359.5
ENST00000474290.1
CDS CCA 72 bp AAGCACGTGGATCCACGGGTCGTGCTTGAGCCGGGGTaGGTAAGTGGCGGAGGGTCGCAGGCGGAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: KHVDPRVVLEPG*VSGGGSQAERS
Trigger: TGAGCGCTCCGCCTGCGACCCTCCGCCACTTACCCACCCCGGCTCAAGCACGACCCGTGGATCCACGTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CAA 90 bp GCACCGAGTGTGAGGGTGGCCACAGAGCGCGCCCAGAGAAACGCCTaGCTAGGGAAGCTACGGAAGGTCAAAGCCGGCGCCTCGCCGGTG +
Preference number: 6 (lower is better)
Translates to: APSVRVATERAQRNA*LGKLRKVKAGASPV
Trigger: CACCGGCGAGGCGCCGGCTTTGACCTTCCGTAGCTTCCCTAGCAAGGCGTTTCTCTGGGCGCGCTCTGTGGCCACCCTCACACTCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402131.5
ENST00000403425.5
ENST00000430901.1
ENST00000475927.5
CDS TCA 72 bp AGCTCACGCTGGTTACCGCCCGGGAGGGTGGTCCCGTaGAGTAGCCGTGGGCAAAGGGCTCGATTTCCGGGC +
Preference number: 6 (lower is better)
Translates to: SSRWLPPGRVVP*SSRGQRARFPG
Trigger: GCCCGGAAATCGAGCCCTTTGCCCACGGCTACTTCACGGGACCACCCTCCCGGGCGGTAACCAGCGTGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402131.5
CDS CCA 72 bp CGCTGTCTCGGGTGCCCCTTCGTGTCAGCCATCCTCTaGTCTCTCGGGTCTCCGAAGCTCGGGGCTAACTGG +
Preference number: 6 (lower is better)
Translates to: RCLGCPFVSAIL*SLGSPKLGANW
Trigger: CCAGTTAGCCCCGAGCTTCGGAGACCCGAGAGACCAGAGGATGGCTGACACGAAGGGGCACCCGAGACAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381359.5
ENST00000474290.1
CDS CAA 72 bp GTGAGGGTGGCCACAGAGCGCGCCCAGAGAAACGCCTaGCTAGGGAAGCTACGGAAGGTCAAAGCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: VRVATERAQRNA*LGKLRKVKAGA
Trigger: GGCGCCGGCTTTGACCTTCCGTAGCTTCCCTAGCAAGGCGTTTCTCTGGGCGCGCTCTGTGGCCACCCTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402131.5
ENST00000403425.5
ENST00000430901.1
ENST00000475927.5
CDS TCA 72 bp GCGCTCCCGCGGGCTCGAGCACGTGACCGTGCAGAGTaGCCTCATGCGGGGACAGTTTGGGGTACTGACAAA +
Preference number: 6 (lower is better)
Translates to: ALPRARARDRAE*PHAGTVWGTDK
Trigger: TTTGTCAGTACCCCAAACTGTCCCCGCATGAGGTCACTCTGCACGGTCACGTGCTCGAGCCCGCGGGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS TCA 72 bp GGACAAGAAAAAGCACGTGGATCCACGGGTCGTGCTTaGGCCGGGGTGGGTAAGTGGCGGAGGGTCGCAGGC +
Preference number: 6 (lower is better)
Translates to: GQEKARGSTGRA*AGVGKWRRVAG
Trigger: GCCTGCGACCCTCCGCCACTTACCCACCCCGGCTCAAGCACGACCCGTGGATCCACGTGCTTTTTCTTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 72 bp CCTCGTTCTGTCGGACGTTGCAGGTCCCGCCCCTTCTaGCAACGTAGCACAGTCGTTCCTTTCCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: PRSVGRCRSRPF*QRSTVVPFLPA
Trigger: GGCGGGGAGGAAAGGAACGACTGTGCTACGTTGCCAGAAGGGGCGGGACCTGCAACGTCCGACAGAACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381359.5
ENST00000630046.2
ENST00000674451.1
CDS CCA 72 bp GAAGATCCGGGAGGGCCTATGCCTAACCCGGGAGGGTaGTCCCGTGAAGTAGCCGTGGGCAAAGGGCTCGAT +
Preference number: 6 (lower is better)
Translates to: EDPGGPMPNPGG*SREVAVGKGLD
Trigger: ATCGAGCCCTTTGCCCACGGCTACTTCACGGGACCACCCTCCCGGGTTAGGCATAGGCCCTCCCGGATCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403425.5
ENST00000430901.1
ENST00000475927.5
CDS CAA 72 bp CCCCCACCAGCCCGCGGGCACAGCTGCATAATAGGTTaGTGTGTACTTTCTCTGCTTGCGGGCGGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PPPARGHSCIIG*CVLSLLAGGSR
Trigger: TCTGCTGCCGCCCGCAAGCAGAGAAAGTACACACAAACCTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409646.5
CDS GCA 72 bp TCCACCTCCACTCCCCCACCAGCCCGCGGGCACAGCTaGATAATAGGTTTGTGTGTACTTTCTCTGCTTGCG +
Preference number: 6 (lower is better)
Translates to: STSTPPPARGHS*IIGLCVLSLLA
Trigger: CGCAAGCAGAGAAAGTACACACAAACCTATTATGCAGCTGTGCCCGCGGGCTGGTGGGGGAGTGGAGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409646.5
CDS TCA 72 bp GGCAGGCGCCCGCCCCCGTCCTTTCCTGTAAGGCTGTaGGCTAACAATTTGGAGGGTGGGGAGGAAATAAAA +
Preference number: 6 (lower is better)
Translates to: GRRPPPSFPVRL*ANNLEGGEEIK
Trigger: TTTTATTTCCTCCCCACCCTCCAAATTGTTAGCTCACAGCCTTACAGGAAAGGACGGGGGCGGGCGCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475927.5
ENST00000486144.1
CDS GCA 72 bp TCTCCCGCCCCTCTGCGGCTGAAACCCTCAAGGGGTTaGAGGTTCAGCTTTCACTTAGAGACAGCAACTCCA +
Preference number: 6 (lower is better)
Translates to: SPAPLRLKPSRG*RFSFHLETATP
Trigger: TGGAGTTGCTGTCTCTAAGTGAAAGCTGAACCTGCAACCCCTTGAGGGTTTCAGCCGCAGAGGGGCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381359.5
ENST00000474290.1
CDS TCA 72 bp TGCAGAGTGACCTCATGCGGGGACAGTTTGGGGTACTaGCAAAGTCGCCCTGAAAGAACGCCCGTAGACAAG +
Preference number: 6 (lower is better)
Translates to: CRVTSCGDSLGY*QSRPERTPVDK
Trigger: CTTGTCTACGGGCGTTCTTTCAGGGCGACTTTGTCAGTACCCCAAACTGTCCCCGCATGAGGTCACTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630046.2
ENST00000674451.1
CDS TCA 72 bp TGCAGAGTGACCTCATGCGGGGACAGTTTGGGGTACTaGCAAAGTCGCCCTGTAGTCCTTAGCTACTCAGGA +
Preference number: 6 (lower is better)
Translates to: CRVTSCGDSLGY*QSRPVVLSYSG
Trigger: TCCTGAGTAGCTAAGGACTACAGGGCGACTTTGTCAGTACCCCAAACTGTCCCCGCATGAGGTCACTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381359.5
CDS CCA 72 bp CTACTAAGTTGTCAGTGGGCGGCAATCCCAAATGGCTaGAATCAGCTTGAAACAGAACCTCTGCTTGCGGGC +
Preference number: 6 (lower is better)
Translates to: LLSCQWAAIPNG*NQLETEPLLAG
Trigger: GCCCGCAAGCAGAGGTTCTGTTTCAAGCTGATTCCAGCCATTTGGGATTGCCGCCCACTGACAACTTAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409291.5
CDS TCA 72 bp AAAGTAGACATAGGCTGGGTAAAGGAAATTCCGGGATaGAGTAATAGCACTCTGCTTGCGGGCGGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: KVDIGWVKEIPG*SNSTLLAGGSR
Trigger: TCTGCTGCCGCCCGCAAGCAGAGTGCTATTACTTCATCCCGGAATTTCCTTTACCCAGCCTATGTCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430901.1
ENST00000448830.2
ENST00000630046.2
CDS CAA 90 bp CGGGGTTTCAGCCAGTTCTGTGTTACGAGTACTCTACTACTAAACTaGTGCTTACTTAGGACCACCTCTCAGCCACTTATTTGGACACGA +
Preference number: 6 (lower is better)
Translates to: RGFSQFCVTSTLLLN*CLLRTTSQPLIWTR
Trigger: TCGTGTCCAAATAAGTGGCTGAGAGGTGGTCCTAAGTAAGCACAAGTTTAGTAGTAGAGTACTCGTAACACAGAACTGGCTGAAACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630046.2
ENST00000674451.1
CDS GCA 72 bp CAGTTCTGTGTTACGAGTACTCTACTACTAAACTTGTaGTTACTTAGGACCACCTCTCAGCCACTTATTTGG +
Preference number: 6 (lower is better)
Translates to: QFCVTSTLLLNL*LLRTTSQPLIW
Trigger: CCAAATAAGTGGCTGAGAGGTGGTCCTAAGTAAGCACAAGTTTAGTAGTAGAGTACTCGTAACACAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630046.2
ENST00000674451.1
CDS CAA 72 bp AGCCAGTTCTGTGTTACGAGTACTCTACTACTAAACTaGTGCTTACTTAGGACCACCTCTCAGCCACTTATT +
Preference number: 6 (lower is better)
Translates to: SQFCVTSTLLLN*CLLRTTSQPLI
Trigger: AATAAGTGGCTGAGAGGTGGTCCTAAGTAAGCACAAGTTTAGTAGTAGAGTACTCGTAACACAGAACTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630046.2
ENST00000674451.1