Pregenerated sensors for SERBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142864

Ensembl transcript IDs: ENST00000361219.11, ENST00000370994.8, ENST00000490406.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	ACACCCCCACACACACCAGGTCACAGGCTGAACTTTGCTGACCCCTaGCTTACATACAGCATCTCATTTAAATGGCGCTCATTTCCAGTG	+
Preference number: 1 (lower is better) Translates to: TPPHTPGHRLNFADP*LTYSISFKWRSFPV Trigger: CACTGGAAATGAGCGCCATTTAAATGAGATGCTGTATGTAAGCCAGGGGTCAGCAAAGTTCAGCCTGTGACCTGGTGTGTGTGGGGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361219.11 ENST00000370994.8
3UTR TCA 90 bp	CACACACACACACACACACACCCCCACACACACCAGGTCACAGGCTaGACTTTGCTGACCCCTGGCTTACATACAGCATCTCATTTAAAT	+
Preference number: 1 (lower is better) Translates to: HTHTHTHPHTHQVTG*TLLTPGLHTASHLN Trigger: ATTTAAATGAGATGCTGTATGTAAGCCAGGGGTCAGCAAAGTTCAGCCTGTGACCTGGTGTGTGTGGGGGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361219.11 ENST00000370994.8
3UTR TCA 72 bp	ACACACACACACCCCCACACACACCAGGTCACAGGCTaGACTTTGCTGACCCCTGGCTTACATACAGCATCT	+
Preference number: 3 (lower is better) Translates to: THTHPHTHQVTG*TLLTPGLHTAS Trigger: AGATGCTGTATGTAAGCCAGGGGTCAGCAAAGTTCAGCCTGTGACCTGGTGTGTGTGGGGGTGTGTGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361219.11 ENST00000370994.8
3UTR CCA 72 bp	CCCCACCTCCCGGGTTCAAGTGATTCTTGGGTGTGGTaGTGTACACCTGTAAAATTAGCTGTCTGTGGTGGT	+
Preference number: 3 (lower is better) Translates to: PHLPGSSDSWVW*CTPVKLAVCGG Trigger: ACCACCACAGACAGCTAATTTTACAGGTGTACACCACCACACCCAAGAATCACTTGAACCCGGGAGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361219.11 ENST00000370994.8
3UTR CCA 72 bp	CACACACCAGGTCACAGGCTGAACTTTGCTGACCCCTaGCTTACATACAGCATCTCATTTAAATGGCGCTCA	+
Preference number: 3 (lower is better) Translates to: HTPGHRLNFADP*LTYSISFKWRS Trigger: TGAGCGCCATTTAAATGAGATGCTGTATGTAAGCCAGGGGTCAGCAAAGTTCAGCCTGTGACCTGGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361219.11 ENST00000370994.8
CDS TCA 90 bp	GGGATACTCCGCGCCGTCGTGGGACAAGACGGCAGGACAGGAGCCTaGAACAACAGCACCTCAAAGGAGCAGCTCTGCGCAGTAAGCAGC	+
Preference number: 5 (lower is better) Translates to: GILRAVVGQDGRTGA*NNSTSKEQLCAVSS Trigger: GCTGCTTACTGCGCAGAGCTGCTCCTTTGAGGTGCTGTTGTTTCAGGCTCCTGTCCTGCCGTCTTGTCCCACGACGGCGCGGAGTATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490406.1
CDS TCA 72 bp	CGCGCCGTCGTGGGACAAGACGGCAGGACAGGAGCCTaGAACAACAGCACCTCAAAGGAGCAGCTCTGCGCA	+
Preference number: 6 (lower is better) Translates to: RAVVGQDGRTGA*NNSTSKEQLCA Trigger: TGCGCAGAGCTGCTCCTTTGAGGTGCTGTTGTTTCAGGCTCCTGTCCTGCCGTCTTGTCCCACGACGGCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490406.1
CDS CCA 72 bp	CACCTCAAAGGAGCAGCTCTGCGCAGTAAGCAGCGATaGACCCCCAAGCTCCTCCGTAACTACGGAAAGCTT	+
Preference number: 6 (lower is better) Translates to: HLKGAALRSKQR*TPKLLRNYGKL Trigger: AAGCTTTCCGTAGTTACGGAGGAGCTTGGGGGTCCATCGCTGCTTACTGCGCAGAGCTGCTCCTTTGAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490406.1

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